SEQDB: 3101377
SEQDB ID: 3101377A
Reference:
3101377
Name: glucose-inhibited division protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gidA
Sequence:
1 MKHSDFDIVV IGAGHAGAEA AHAAARMGMR TALVSLSERD IGVMSCNPAI GGLGKGHLVR
61 EIDALDGVMG RVADKAGIQF RLLNRRKGPA VQGPRAQADR KLYRLAMQEE MRNRPGLTIV
121 EGEVTDFRMQ GDRVAGVVLA DGSEIASQAV ILTSGTFLRG IIHIGDVSRP GGRMGDRPSV
181 PLAERLDGFA LPMGRLKTGT PPRLDGRTID WSILERQDGD DDPVLFSFLS KGAYARQIAC
241 GITHTNAQTH EIIRKNLSRS AMYGGHIEGV GPRYCPSIED KIVRFADKDS HQIFLEPEGL
301 EDHTVYPNGI STSLPVDVQE DYVRSIRGLE QVEILQPGYA IEYDYVDPRA LTSQLSLPNV
361 PGLYLAGQIN GTTGYEEAAA QGMVAGLNAA TAILGHEPVP FSRANSYIGV MIDDLTTRGV
421 AEPYRMFTSR AEFRLSLRAD NADQRLTPLG LELGCVGDER RDVFARKAEK LATASALLDQ
481 SSFSPKEIAT AGITISQDGN RRNGFAVLAF PDVRFDDLVP LIPELADTDA ETRAQVERDA
541 LYANYIARQE RDVEAMKRDE ALVIPIDFNF SALDGLSNEL KQKLTSARPE NIAQAGRVEG
601 MTPAALALIL ARLRRGDRAR SA
SEQDB ID: 3101377AA
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRRFGESPE PGRRYTRRVG AYALLPRGSD LLLTSQYDPD PDLQLPGGGI DPGESPVAAL
61 HREVYEETGW LIAAPRRIGA FRRFAYMPEY NLWAEKICLI YRARPVRRIG PPTEPDHAAL
121 WMPAHSAAQL LGNAGDRHFA ARHLARITAR
SEQDB ID: 3101377AAA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNDMSDWKPK RFWKQAAVAE TAEGYAVELD GRPVRTPAKA PLLLPTRALA EAIAAEWDAQ
61 ESEVDPINMP FTRTANAAID KVRIQQAEVA DMLAAYGDSD LLCYRADSPA ELVELQAQTW
121 DPALDWAAET LGVRLRPVQG VMHQPQPASA IETLTRKVHA LNPFQLAAFH DLVSLSGSLV
181 LGFAAALNWR KADEIWQISR LDETWQEEQW GPDDEARALA AVKRAAFLHA KAAYDIST
SEQDB ID: 3101377AAB
Reference:
3101377
Name: Glu/Gln/Asp/Asn ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDIAPKLGP IEGDSSFEIR SGANVCRSNR SGTGVENQEE VKMKKSVFLG ALTVAGMAAG
61 VAAAGTMDDV KARGKLNCGV TTGLVGFAAP DSNGEWKGFD VALCRAVAAA VLGDGNAVEF
121 VPTTGKTRFT ALASGEVDML ARNTTWTFSR DVDLKFEFVG VNYYDGQGFM VPKSLGVSSA
181 KELDGATVCI QTGTTTELNL ADFFRANNIS YEPVPIETNA EAQQQYLAGA CDVYTTDASG
241 LAATRATFEN PGDHVLLPEI ISKEPLGPLV RHGDHEWGDV VRWTLNALVS AEEMGITSAN
301 IDEMSAGTNN PEINRILGSE GTLGEMLGLD AEWAKRAIKV GGNYGEVFAQ NIGESTPIGL
361 ARGLNAQWTD GGLLYSPPFR
SEQDB ID: 3101377AAC
Reference:
3101377
Name: Glu/Gln/Asp/Asn ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTLTDPPKE QFRLSMLLYD TRYRSATIQV IAMIGFMLLA AWLISNTAQN LAALGKPIDF
61 GFFSEPASYD INQRLLDYSS RDTHLRAAFI GLLNTLVVAV LGCITATVLG VIIGVLRLSN
121 NWIVARLMTI YVEGFRNVPV LLWIVFIMAI LIETLPAPRA FRGDDATASM MLNDSVAVTN
181 RGVYIPDALF SNSLGNVHLF GESSLRFDIS LDLMLILIVL GGSLWVSNFL RKRADRIQEQ
241 TGDRPVTWWQ RLAVVVLPTG LVLVLLGFHL GYPELKGFNF QGGTHLRNSL IALWLALSLY
301 TAAFIAEIVR AGILAISKGQ TEAASALGLR SNKIMSLVIL PQALRVIIPP LISNYLNLTK
361 NSSLAIAVGY MDITGTLGGI TMNQTGRELE TILLLMLVYL TISLSISAVM NWYNESVKLK
421 ER
SEQDB ID: 3101377AAD
Reference:
3101377
Name: Glu/Gln/Asp/Asn ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDIGFVRTE MLPEREPPAS TVGALGWARA NLFSNWFNSV LTLASLYAVF AILAAVLPWI
61 FSPTWNGTSL SNCREILTAA GSVGDHGTSG ACWGVIRERW IQLLFGFYPS ELYWRPILAF
121 ILLGVALAPV LFSDKMPSKM LIFSGLYPFI FPWLLWGGTI WGPIAALLGF VLGWVIYSAV
181 SKTMSSLIGI LLGAAAALVW WLVLAGFFVG VFDSVLAIGI EAVESRKFGG FMLSITIGVV
241 AIACSLPLGI VLALGRQSDL LIVKYICVGF IEFIRGVPLI TLLFVASTLL NIFMPPGTNF
301 DIILRVLIMV TLFAAAYMAE VIRGGLAALP KGQYEGADSL GLNYWQAQRL IIMPQALKIS
361 IPGIVSTFIG VFKDTVLVSI IGLLDPLGLS NAIRADANWN GIVWEIYGFI ALIFFVFCFG
421 MSRYSMYLER KLHTGHR
SEQDB ID: 3101377AAE
Reference:
3101377
Name: Glu/Gln/Asp/Asn ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSELAIDREI DRSKMQVSDE VAIEITNMNK WYGAFHVLRD INLTVYQGER IVIAGPSGSG
61 KSTLIRCLNA LEEHQQGKIV VDGTELSNDL KNIDKIRSEV GMVFQHFNLF PHLTILENCT
121 LAPIWVRKTP RKEAEETAMH FLEKVKIPEQ ALKYPGQLSG GQQQRVAIAR SLCMRPRIML
181 FDEPTSALDP EMIKEVLDTM IELAEEGMTM LCVTHEMGFA RQVANRVIFM DAGQIVEQNE
241 PEEFFNNPQS ERTKLFLSQI LGH
SEQDB ID: 3101377AAF
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRILILTRH AKSAWDDISL GDHERPLNKR GRRSAQAIGA WLRKRGYLPD QVISSDAVRT
61 RETWTQMSAE MGQAGGDPTF TRSLYLAPAQ HILANLRQAS GRVVLLLGHN PGIAEFAGQI
121 VDEAPAHARF FDYPTGATTV IEFARDTWGD IGWHQGEVLD FIVPRELTD
SEQDB ID: 3101377AAG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLERISAEA AASALIVMGA LHPADAAGTV VLLGTGPGFW PVFSAAQEYG DGQRDPVDRW
61 SKRVIGAIAA NLGAETAFPS DGPPYPPFIA WALASGRFHT SPVGMMVHDQ VGLMISLRGA
121 LLLPDRIDLP VADAPSPCDS CDAPCTRACP VGALAAGRAY DVDACRGYLD TAAGSACMEA
181 GCAARLACPL SAGAARDPAQ SALHMRAFLR R
SEQDB ID: 3101377AAH
Reference:
3101377
Name: sterol desaturase-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MENESLVRLA MFVGLFVLFA IAERLAPRRM VHPRRPRRWL TNLTISVLNT VTLRALAVGL
61 PLLAVGAALD ASALGWGLFN HLGWPGWVEV LLAVLILDFA IWGQHLITHK IPLLWRLHRV
121 HHADTDIDVT TAIRFHPVEI ALSMLLKIGL VYLLGPSALA VILFEILLNG TALFNHSNLR
181 LPLALDAVLR KVLVTPDMHR VHHSVLREEH DSNYGFALSI WDRMMGTYVA QPAKGHDEMT
241 IGLAWQDDRP TRLGWSLLLP FRRR
SEQDB ID: 3101377AAJ
Reference:
3101377
Name: Ac-Glu kinase, Class: EC2.7.2.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argB
Sequence:
1 MKTRDMNRDW IATAATLNAA LPYLQRYDDA IVVIKLGGHA MGSDEAMESF ARDVVLLRQV
61 GVNPVVVHGG GPMINAMLKK LDIQSEFVNG KRVTDVATVE VVEMVLSGVV NKRIVQEINR
121 QGGKAVGLSG KDANLMICDQ TNPDLGFVGT PTEMNPDLLR NLFAHDIIPV IAPLGAGREG
181 ETFNVNGDTA AGAIAAALKA DRLLLLTDVS GVKNGEGEVL TELKAGQIRE MIADGTIAGG
241 MIPKTETALD ALDNGVRAVV ILDGRVDNAV LLELYTEHGA GSLIRRD
SEQDB ID: 3101377AAK
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGSARNQSR GRIMTRKTLV LTGASRGIGH ATVRRFVAEG WRVITCSREP VPPGCPWSSG
61 ENNHVQIDLS DPQATIAGAE IIRAKLDGRL DALVNNAGIS PKGSDGERLS TLSTDLSDWG
121 HVFHVNFFAP VVLARSLKDE LAAAKGSVVN VTSIAGSRVH PFAGAAYATS KAALAALTRE
181 MAHDFGPLGV RVNAIAPGEV ETSILSPGTD KIVEKLPMQR LGQPSEVAAA IYFLCSPESS
241 YISGTEIEVN GAQHV
SEQDB ID: 3101377AAL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADSQTNARG TMHPLAQKFY FAAWRWHFYA ALYVIPFLLI LAVTGLMMMF ITQFDGRDGE
61 KIAVQPQSTE LSFDAQSAAV LQAQPGTIVE WIGPKAPDLA AVFRVKTPEG QRLVALDQYS
121 GEVLSIWDRR AGWYDLADNI HSTLLIGDLG DRLIEIAAGL GIVLILTGLY IWWPRDNAMS
181 ALVPNLRARG RALWKSLHAV TGFWISALLL VFLVSGLSWA GIWGGKLVQA WSTFPAEKWD
241 NVPLSDDVHA SMNHGHTNDV PWALEQTPLP ASGSEAGVTG LPEGQPVSAE NLIALGRAMG
301 MEGRFRLAYP AGGTGVWTIN RDSMSGDSDD PFIDRTIHVD QYTGKVLADV RYDDYSWAGK
361 AMAVGVPFHM GLMGGWNFAL NIVFCLSVIF LCVSGVVMWV KRRPARSLRL AAPPEPADMP
421 MWKGAALVAV LVSLMFPLAG LALIAALAFD VLILSNIPAL RRALA
SEQDB ID: 3101377AAM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFLTHFSAV LSLLAVVLTS AIPQGWMPMR KDDRILLVIC TEEGEARQWV DLAPDSPAHE
61 DESDARPSCH FGGLNQVAIL AQPPLLMTLN HAQRTRWDNL DFTHRSAGFF PLYDARGPPH
121 LS
SEQDB ID: 3101377AAN
Reference:
3101377
Name: GTP-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTALPFPVAE EPDAFTAETG RKLFAGPSEF VKGVVAMSGL PPADRVEVCF AGRSNVGKSS
61 LINALTGTKG LARASNTPGR TQEINFFTQG PELYLVDLPG YGYANAPLKV VEKWQKLLKQ
121 YLSGRQTLRR AFVLIDARHG VKAVDDEIMK LLDTSAVTFQ CVLTKADKVK AAERDKVLAQ
181 VRAALAKHPA AYPEIVLTSS EKGDGIATLR SIIAHLE
SEQDB ID: 3101377AAP
Reference:
3101377
Name: MOSC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGTVTGLWR HPIKSHGREA LDSVTLSPGQ TMPGDRVWAV AHEMSQADGS EWVHCGHFSR
61 VSKVPELMAI SATLNGDRVT LRHPRRPDLD FAPDAEANRF LDWVKPLMPQ DRAQSARIIR
121 VPGRGMTDSD FPSVTLCNMA SHRAVEQRIG HALSPLRWRG NIWFDGLPLW EEFDWLDREV
181 QIGEVVFAVR ERTDRCAATT TNPETGKRDA DTLGALDHWG HRDFSVRAEV IRGGTIRLGD
241 EVRPL
SEQDB ID: 3101377AAQ
Reference:
3101377
Name: inner membrane protein, Isotype: YidC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDDQNKNLIL ATALSFLVIL VWFILFPPPE QTEAPATEIA TTNGTAVQTP TAAATEGGAG
61 EVPALDSAAP TQAEAPRVQI DTPRLKGSVS LLGGRIDELS LKDYRVSLDE DAEIVEMLTP
121 AGSTSAYYAL YGWAPGAGLN AADVPGPLTE WSLESGDTLS VGTPVTLSWS NGSGVTFRRT
181 LAVDEDYMFT VTQSVENGSA APIGAAPYGI LARHGIGEDA DLPGLKNFFI LHEGVVAMND
241 GTLSEIDYKD VRKFDIDPNE GAQAEVFQNK SDGWIGFTDH YWMATLIPGS GTAFKSAAKY
301 DARRKIYQAE TVLPTMSVAP GESAEVTTRL FAGAKEWESI RAYQQDGVQK FLDSIDWGWF
361 FFLTKPIFWL LHQINGLIGN MGWSIIGLTL IIKAIVFPLA LKSYVSMAKM KELQPQMEAL
421 KEAAGDDRQK MQQGMMELYK KEKVNPAAGC LPILLQIPIF FSLYKVIFVT IELRQAPWFG
481 PFRDLSMPDP TSIMNFFGWL PWAGPEAGSL TATILIGILP LLLGISMWLQ QKLNPAPTDP
541 TQAMIFAWMP WVFMFMLGSF ASGLVVYWIA NNTITFTQQY IIMRSHGYKP DVFGNIKSGF
601 ARRAKADKK
SEQDB ID: 3101377AAR
Reference:
3101377
Name: diguanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIKPSLTRI RNAVVPVLTG PPILAFLPAV TLGAFWLGGE IALLLISLGL PLMFAFAGAF
61 GKWPVNHQLP RDSVTGLMLK DGFEGALTHI HAMAAETDRK SACFIIELDD YADLVDHHGQ
121 EAGDLVALRS GERILSAVRN NDVVARLGDR RFAVCLAPVP QLDLELCIQL AGRMQSAVED
181 PISLDGVAIY VSCSIGFCQN RRAPGSSASD WLDAANVALA AAQGAGPSAI RAYAPDMERR
241 PSGAPDLRDE IQAALENGQI QPWYQPQIST DTGKVTGFEA LARWNHPTRG LLAPNLFLPV
301 IEEAGLMERL GQVMLYHALT AVKAWDSAGV DVPRVGVNFA SDELRNPGLV ERVQWELDRF
361 DLTPDRLSVE ILETVFSNTP DDVITRNIAG LGKLGCRIDL DDFGTGHASI ASIRRFDISR
421 IKIDRSFVMK ADRDPEQQRM IAAILTMAER LELETLAEGV ETVGEHALLA QLGCDHVQGF
481 GIGKPMPFDQ TLDWIAHHDA KLQDAPRIGR ETG
SEQDB ID: 3101377AAT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDENEDIHP LFAGAPATTE FKKLRKRIVR YTREAIEQYG MVERRADGST PKWLVCLSGG
61 KDSYTLLAVL YELKWRGLLP VDLLACNLDQ GQPGFPSTVL PEFLDRMGVP NRIEYQDTYS
121 VVVDKVPQGR TYCALCSRLR RGNLYRIARE EGCSAVVLGH HRDDILETFF MNLFHGGRLA
181 TMPPKLVNEE GDLFVFRPLA HVAEADCEKF ARAMNYPIIP CDLCGSQDGL QRQQVKQILD
241 GWEKNRPGRR QVMFRALMNA RPSHLLDPKL FDFQGLELGS REKGENFGEI PLLR
SEQDB ID: 3101377AAU
Reference:
3101377
Name: K-dependent Na/Ca exchanger-related protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEYLSIAAGL IGLFLGGEAL VRGSVGLAQR LGLPPLLIGL TVVGFGTSTP ELLVSVDAAL
61 RGVPDIALGN ILGSNIANIL LIGGITSLIW PIRGKPVGLW RDLTVMILAT LALTPILLGG
121 QVIRVVGLVL LLSLVAYLVW SYRQAGGPCA EDTETDLPDV PARPFVAPAL IGAGLLGLMI
181 GARLLVDGAV SVAQGLGVSD AFIGLTIVAV GTSLPELATS VIAAYRRQSE IAVGNIVGSN
241 IFNVLGILGA TAVIAPIPVA SRFALFDLPV ALAAAVTFSV LLLWRAGVSR GAGVLLLLAY
301 AAYVWAAQG
SEQDB ID: 3101377AAV
Reference:
3101377
Name: ORF TIGR00278
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPLAHILAL PVRAYRLIFS PWVGFNCRYQ PTCSAYALEA LEKHGALRGS WLAARRIGRC
61 HPLGSDGYDP VPEPKDRKPP HSPAG
SEQDB ID: 3101377AAW
Reference:
3101377
Name: RNase, Isotype: P, Subunit: protein component, Class: EC3.1.26.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPPEAPTDG TASPGEMPPA VSVCASSGIS VLRKRSDFLK AARARRQGAG SMMVQARKRD
61 AGEAEGIRVG FTCSKKVGNA VARNRAKRRL REAARLVLPD MGRPGWDYVL IGRPSDTASR
121 PFDGLLDDLR RALRKLHAPK P
SEQDB ID: 3101377AAX
Reference:
3101377
Name: ribosomal protein L34
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmH
Sequence:
1 MEYGAMKRTY QPSNLVRKRR HGFRARMATK AGRKILNARR ARGRKELSA
SEQDB ID: 3101377AAY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAWVCILGQ MKPDPETKPD PMRQTAQPAP QRLLRHLPLI VIVLIAVIGA ITLRDYLSFD
61 TLAANRQALL AYREAHYAAL AAIFVATYVL IVAFSLPGAA VASMTGGFLF GLAVGTVLNV
121 VAATIGAVAI FLAARAGLGA MLTARLEASE GTVKRLKEGL RRNEIEVLFL LRLVPAVPFF
181 AANLIPALVG VKLRNYVLTT ALGIVPGAIV FTWIGVGLGG VFDRGESPDL SLFREPFVIG
241 PILGLCLLAA LPIAIKALRG KPEGE
SEQDB ID: 3101377AB
Reference:
3101377
Name: chaperonin, Isotype: 33kD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hslO
Sequence:
1 MTLGTKIAWD DTVLPFQLDL PDMRGRVARL DGVLDGILKQ HDYPTVVEAL VAEMALLTAL
61 IGQTIGLRWK LSLQVQSKGA VRMIATDYYA PRAEGEPARI RAYAGFDADR LTDGAPFDQV
121 GEGYFAILID QGKGTQPYQG ITPLAGGSLS ACAEAYFAQS EQLPTRFQLR FGKSTEPGVP
181 EHWRAGGVML QHMPKASPFA AGGPGTGDIL TAADLVDGAE GENWNRVNIL LDTVEDLELI
241 GPALPPTDLL VRLFHEEQPR VYDAQSVRFG CTCSEERVRQ SLSIYSVKDI GHMTTDEGTV
301 TADCQFCGAH YVLDPASVGF EADQGD
SEQDB ID: 3101377ABA
Reference:
3101377
Name: Hg reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERIETDLLV IGAGSGGLSV AAGASQMGAR VVLLEGHEMG GDCLNYGCVP SKALIASAKA
61 AHARMTDAGL GVAGQEPQVD FAAVKDHVAA VIAQIAPVDS QDRFEGLGVR VIREYGQFVS
121 RTEVQAGAHL IAARRIVIAT GSTPLIPPIP GLDSVPYLTN EILFDLRQRP DHLLIIGGGP
181 IGLEMAQAHV RLGCKVTVIE AARALNREDP EAAALVLTRL RAEGVEIAED TAAAQIRGRA
241 GAIEVVSAEG RIFAGSHLLV AVGRKASTDR LNLDAAGVET TRTGIRVDAS LRTSNRRVYA
301 IGDVAGGLQF THVAGYQAGV ILRSALFGLP SKARTDHIPR ATYTDPELAQ IGLTEAEARD
361 RHGDRVEVAR FDYLHNDRAI AEGRTEGFIK VMVVRGRPVG VTIVGHQAGE HANLWSLALA
421 NNLKMSQVAA MVSPYPTIGE ISKRAAGAYF SPRLFENQSV KRVVGLVQRW LP
SEQDB ID: 3101377ABB
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNSLSGRFL ILTVAFVMLA EVLIFVPSIA RFRQDFLQNR LERAQIASLA LLADDMLATD
61 LETELLENAG VYNVVLRRDE VRQLMLSSPI PGQIGQSYDL RQASPWILMR DALLRFFMSE
121 NEVIRVIGEP VKEAGLLIEV TMDSQPLRMA MIDYGARILL LSLVISIITA FFLFLAVRAI
181 LVRPIRGVVD YMQRYARAPE DVRGIITPNS GVTELREAEE ALQMLQRQLT QALRQRERLA
241 QLGGAVAKVS HDLRNILTSA QLFTDRIETS EDPLVRRMAP KLVNSITRAV SLCESTLAFG
301 RAEEPSPMLT MVRLHMVAED VVASERLALG EGAIEIVNEV PETLSARADP EQLFRVVMNL
361 VRNARQALEA TGQAGLVAVS GHETEADWVI EVRDTGPGLP LKARENLFTP FQGGVRKGGS
421 GLGLAISAEL VRGHGGALVL KDSGPSGTAF EIRLPKGGET F
SEQDB ID: 3101377ABC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTAQPDFDL IVAGAGMVGM SAALYAQMDG LKVALCDPNP PGSGTTYGSA CTIATYACIP
61 VNSPAIFAAL PYLLTSKDSP LSFNLLHGLK NPCWMLSFLA NCRAARVRRI TEALGRFLAD
121 ADAGLDPLIM AAGAEDLIVS NDCLYVWSTR AGYEGARASN ALRRAQGVRF EELGPDEVRA
181 MEPNLKQPIH RGLHFKGARH VTSPQALVGR MQHRFETLGG TYLPARVERC DPDEGGVTVR
241 LNDGGTLRAG HFALTAGARS RQIAGTGAEG LPLGTERGYH ILYRDHASLV SRPVGWAEAG
301 FYATPMAQGL RIAGTVEINA IDAPFNTKRT DYLQRKSHEM FGQLGAPDET WLGHRPTMPD
361 SLPVIGPSPS SDRVIFAFGH QHIGLTLGGL TGKVVADLAQ QRSPTCNLGD FAPQRFT
SEQDB ID: 3101377ABD
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQVRVAVIG GGVVGVSVLY HLARLGWTDC CLLERTQLTA GSTWHAAGLL PLYYPNQTMS
61 LINKHSMQLY ARLQAETGQP SGFHQCGQLR LATDHDRLDE YRAYLSFARY LGIDCALITR
121 EEAQKLWPLA DLGDVIAALY HPGDGHIAPA DLTQAMATGA RGMGAKIHLN TEATAISRTA
181 SGEWLISTPN GDFLAEHVVT ATGNYARQTG AMVGLNVPSI PVMHQYVVTE TIKEFADHNR
241 AGRPEMPVLR DDKSRFYLRQ ENDGLILGPY EPNPKSWAIN GVPPGFGAEL MTPDYDSLEP
301 FIEGTLRRVS SFAAAGIRTV VNGPIAHTPD AFPLVGPAPG LQNYWLAEGM VAGICYGGGV
361 GRYLAEWITE GAPTIDMWPV DPRRFNGHAG KNHTRLKNEE TYGHIFDIHY PNLEMPAARP
421 GKTSPCYDRL TRAGAVWGVA GGWERARWFD AEGNRTPETL TFRRSNAFEA IGAECRAIRN
481 AVGLIDFTSF AKWEVSGAGA MAFLDRALAN AMPKRDGRVT LAHALDENGR FCAEFTVARL
541 AEDRFYICGP AFSEVHDDHV LRSRLRPADA ATLTNVSMGW GCFTVAGPKS RELLSRIVDA
601 PLENDSFKWF DLHEGEVGWA TDVRLMRVNY CGELGWELHH PIAFQHHILD QLEQAGADLG
661 LRHVGMRALD SLRIEKSYRA VAQELTTQNT LHELGLGRFI ATGKTGFIGA QAVAERVGKE
721 SVKLVTLEVD CEAGGVEPAM NQAVRCGDKV IALTTSGAYG HFLGKHLAMA ILPLDHAAEG
781 TRLSVEILDE RYDAVVIADS PHDPGNLRPR A
SEQDB ID: 3101377ABE
Reference:
3101377
Name: UvrABC system protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uvrB
Sequence:
1 MPDAHSDKSA ALMHAPAPDV KARPKLEGGR RFVMQTEFQP AGDQPTAIAE LTQGVNEGER
61 NQVLLGATGT GKTFTMAKVI EETQRPAIIL APNKTLAAQL YGEFKGFFPD NAVEYFVSFY
121 DYYQPEAYVA RSDTYIEKES QINEQIDRMR HSATRALLER DDVIIIASVS CIYGIGSVET
181 YGAMTQDLKV GGEYDQRQIM ADLVAQQYKR NDQAFQRGSF RVRGDSLEVW PAHLEDRAWK
241 LSFFGEELEA ITEFDPLTGQ KTDTFDQIRV YANSHYVTPK PTMQQAIIGI KQELRQRLDQ
301 LVGEGKLLEA QRLEQRTNFD LEMLEATGVC NGIENYSRYL TGRAPGEPPP TLFEFIPDHA
361 IVFADESHVS VPQIGGMYRG DYRRKFTLAE HGFRLPSCMD NRPLKFEEWD AMRPQSVFVS
421 ATPAAWEMEQ SGGVFTEQVI RPTGLLDPQV EIRPVEMQVD DLLDEVRKMA DQGFRTLVTT
481 LTKRMAEDLT EYLHEQGIKV RYMHSDIDTL ERIEILRDLR LGAFDVLVGI NLLREGLDIP
541 ECGLVAILDA DKEGFLRSET SLIQTIGRAA RNAEGRVIMY ADRITGSMER ALGETDRRRA
601 KQIAYNEEHG ITPATVKKNV EDVLAGLYKG DTDMSRVTAK IDKPLHGGNL EAVLDGLRAD
661 MRKAAENLEF EEAARLRDEV KRLEAVDLAV SDDPMARQWA VESASEQAVK SRGRSTAGRP
721 GQRGGNVKRR GR
SEQDB ID: 3101377ABF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSHLRFFAH AGAVSRACRR GCNKELLRMK YTLSLHSRSS PFRIVLEING DPDSDSFHWT
61 EIEPDHEKPF FMAASRSLGY FDNSAKHGEI KRAIFKGSGV ATDKRPPVLE LQICRLPEFK
121 IRDFEHCWQG NILRWADSPN YQKQSLQRFT WRAEAV
SEQDB ID: 3101377ABG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNYRRARIA GASYFFTLAL ADRSSTLLTE RINDLRHAYA LTIREAPIVC EAFVVLPDHL
61 HAVWTLPPGD SAFSERWRKI KHRFSRAVGR TAHPTHRSES KRAKRECGIW QRRFWEHLIR
121 DEDDFRRHVE YCWGNPVKHG LVDRAVDWPF STIHRDIRLG RVDAQWAGRP TEGAFGE
SEQDB ID: 3101377ABH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIAVFAISL AYVLLYGWAW VGTVNASMDA AGRGMALGFL TVGIGATAIF VIPALVLAIA
61 NRAPKWALGL SLAPAALLFL VVMTGVI
SEQDB ID: 3101377ABJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDHARRGDRP MSRLDSMLRR LTAQRDGLNW AALQISGIPG EVLDMGLGNG RTYDHLREIL
61 PGRRIRVMDR VLQCHPSCTP PEADFLMGEA EPMLERLAAE GAPIVLAHYD FGMGIKADDV
121 AEAARLSPLI ARVMVPGGLI ISGQPLVGFT PVAAPDSIPP ERYLFYRA
SEQDB ID: 3101377ABK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPDWTPLDA ELARWAAEGL TLPLWWRDDD AVSTTPQLDR LTALAEDLDL PVHLAVIPAG
61 ADTALADHVT AHPHLVPVVH GWAHQNHVPA TEKKAEFRAH RPLSEILTEA GQGKARLQAL
121 FGDALRPMFV PPWNRIAPEV TAGLPPLGYR ALSTATPRRS PMAAPGLAQV NTHLDPIDWR
181 GSRGLVAPQT LIAQTATLLA DRREGRADAT EPFGILTHHL VHDDEIWQFS GALLARLLAG
241 PCQPWTMPAE ETDR
SEQDB ID: 3101377ABL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKVMIVVTHL LGTGHLSRAL TLGRAFAATG HQVRLVSGGM PAPQLDPAGL ELVQLPPLRS
61 DGVDFARLLT ETGAEADAGF HTTRQAALLE ALTAFAPDVL ITELYPFGRR SLKTEFRALL
121 AAARALPRPP LVLSSIRDIL APPSKPAKAE EADQVIAEAY DAVLVHSDPK VTRLEASWPV
181 SAALADKLRY TGYVAPPPAE PHPERAGAGE ILVSAGGGAV GGPLFRVALE AARRMPSHRW
241 RLLVGGTQAG AEVAALQEQA SNAPVTVEPA RPDFRAMLTH AAASVSMCGY NTALDLLQAR
301 TPAVLIPFDA GKEVEQGLRA RALTALPGFA TVTSAELTPE TLMRALQQVM RDPRRDTTTL
361 RFDGAAETVR MVEMMEAAR
SEQDB ID: 3101377ABM
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLALLRHG HTDWNRAGRI QGRSDIPLDD AARHDLGALA LPAPWDRATL WSSPLSRAVE
61 TAKLVAGHTP RNAPALTEMN WGDWEGQRGR DLLDTPGSGY RHIEDWGWDF RPPAGESPAE
121 VWTRIDPWLA GLTGDSVAVC HIGIMRVILA RAHGWNFDGI PPFKVKRNRL FVVSLDPLAP
181 SGEPVRLIPR EARP
SEQDB ID: 3101377ABN
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARIAFYAPM KSPDSPVPSG DRELARSLRT MIAGRGVPVD LVSEFKSLDK QGDAGAQARL
61 RAGAAVEVRR LIRDLPGDCA LWVTYHNYYK APDLIGPAVC AARAIPYVQI ESTRATSRLT
121 GPWAGFAQAA HDACDAARVI FYLTANDLIT LERERFGTQA LVELPPFLPE NTLPSRTTAD
181 GPMLSAGMMR PGDKLASYRL IAETLAHLDG AWQLDIAGDG PARPEVAALM APFGARVRFL
241 GQLDRAGLQA AYGRSSLFFW PGVNEAFGMV YLEAQAAGLP VVAQDRPGVR DVLLPGPAYP
301 APEAGPEALA EMIDRLRADP GMRQRIGSEA RDRIATRHLP TAAAAVFWGA VTPLMETAS
SEQDB ID: 3101377ABP
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSDSPKLAV VVKGWPRLSE TFIAQELVAL EEAGHDFDIW SLRHPTDVKR HPLHERLRAR
61 VRYLPEYLWQ EPERVWRARA VAQALPGYAE AYRAWRADLA RDRTKNRIRR FGQACVMAAE
121 LPASTRGLYA HFLHTPASVA RYAAIMRGLP WSFSAHAKDI WTSPDWEKAE KLSAASHGAA
181 FGATCTAVGA THLRGLTDDP GRVDLVYHGL DLARFPDPPA RSPRAASAPL AMLSVGRLVE
241 KKGFDRLIAG FGLLPPGLRW HWTHIGGGGD RAALTAQAEA LGIAQQITWR GACDQPEVIA
301 AMRAADLFVL PSRVAADGDR DGLPNVLMEA ASQLLPILST PVSAIPEFIT DGAHGTLSDD
361 APEALARAIA TLAADPERAA GMAAAARVRL LSEFTMAPGI AHLSNRLTAL CAGG
SEQDB ID: 3101377ABQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQGESRTVDT GRAARVMLYS HDTFGLGHLR RSRALAAAIT QADPSASALI LTGSPVAGRF
61 TFPRRVDHVR LPGVTKRADG SYASQTMGMG IDEVTDLRSG LIRGAAERYD PDILIVDKEP
121 TGFRGELLPT LDCLQRRGRA RLVLGLRDVL DEPEVLAAEW ARKGAVAATE RFYDEIWVYG
181 LRSVYDPTAG LPLSPEAQAR MHWTGYLRRD LGPVGTPPHQ PYVLITPGGG GDGEAMVNLV
241 LSAYEQDPTL SPRAVLVYGP FLSGDTRAEF ERRVAALNGR VTAVGFESEI ETLFAGAAGV
301 VCMGGYNTFC EVLSFDQRAV IVPRTVPRLE QWIRASRAEE LGLVRMLEES RDGLTPETMI
361 QAIRNLPNQP LPSQAIGEGL LDGLDHVTRR VRALLSKTSH QAAE
SEQDB ID: 3101377ABR
Reference:
3101377
Name: UDP-glucose/GDP-mannose dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHARSGTQA MSRQTDQDRI AVLGLGYVGL PLALGLARAG FQTLGFDTDA AHITALGRGH
61 DRNGEVSERS LAETRARFSC DPADLAGCTV YIIGVPTPIT DAKTPDLEPL KGACRMIAPH
121 LVPGDMVIVE STVYPGVTEE ICGPVLAEGS GLELYSQIKL AYSPERVNPG DAEHSMENVV
181 KIVSAQDAET LDRVAAIYAP VVKAGVHRAS SIRTAEAAKV IENTQRDLNI ALVNEFSLIF
241 SRLGLDTLEV LEAAGTKWNF LPFKPGLVGG HCIGVDPYYL TYRAEQSGYH PEVILAGRRI
301 NDNMGRHVAR QLIKALIARR IDPGRARVLV MGFTFKENCA DIRNTRVADI LSELAEYSVA
361 TEVCDPWVDP EAMEQEYGVT PVSEPTTGAY DAIVVAVAHR QFVELGAAAI RAFGLPGAVL
421 YDIKGIFSKS DTDLRL
SEQDB ID: 3101377ABT
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSGQALRIS RTCRLNAHPR FDRLWRSPTP IQVSAMIVAF RLFLACLGLF LCLSSPLAAQ
61 VSLYSGIAGT SDESAGGDLA EAIRAASEAG ASVIVIDSAG RVAAAGTEAG AVETARVDPM
121 GEASQLMKAQ EKVSDFIGAL RSRLEALPYS IFEVQYILRQ TSPDGRIATY AEVLAINLVL
181 LLIGRWMSIE IYGKRIARKH VVSRIREAPR GYREKMPFLV FRFVMGVGAT LFAMVFAFII
241 GFLIFGPMQD LSIQFTVTAI FTAYFLARTA SDLWRMVLSP YLSQYRLPPF SDRDAKRLYL
301 WASLLATYDI SSELFSTWVA DFGLNYNVYA MVYGVLTGVG ALGNVLMVLF NGRAISNAIR
361 GGRTKDEVSW ILRLVSVAWA PVVLFYMVFG WLQLAFDLVL ERPVHIPLMA GTYGIFMSVV
421 VAYGAMNYLL ERYFDRTRQV KELNAALAEA EAAEDLSMTG VSAQRHHIAT FEDLARRVAG
481 ILAFVVGTYA LVLIWNPEMD WTGDLPIDRA LDVMVIIFLG YIVFHFFRIW IDSKIAEETV
541 DVPEGELGDE GGGTSASRLA TLLPLFRGAI LAVVVVSIVL IALMEVGINV SPLFAGAGVV
601 GLAVGFGSQT LVRDIFSGAF FLVDDAFRKG EYIDIGDVKG TVEKISVRSF QLRHHLGALH
661 TIPFGEIKVL TNFSRDWVIM KLPLRVTYDT DVEKVRKLIK NLGQELLSDP VIGDNFIQPL
721 KSQGVIEMQD SAMIIRVKFM TKPGDQWLVR KRVYQDIREL FAREGIKFAH REVTVRLADG
781 QEAAKMTPQQ REAVTGAVQA AIDEDVLDDM MDDDR
SEQDB ID: 3101377ABU
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQLPDGRYV DDAPYDPQQS IQQLERRDLD APNWLLVWRK FRTHKLGLIS GIFLLLSYLL
61 LPFMGFIAPY SPNYRNADHL YAPPQAVRWV HEGDFLGPFI YPITAEADLE TFQWTFVPDT
121 ENPQRIRFFC EGDSYKLAGL IESDTHLFCA PEGATLFLWG SDRLGRDVFS RILYGAQLSL
181 TVGLIGISVS FVLGIFFGSL AGYLGGKTDW VINRVIEILR SLPELPLWLA LSAAVPSNWS
241 PVAVFFIISV ILGILDWPGL ARSVRAKFLS LREEEYVRAA EMMGAGKGRV IRKHLLPNFM
301 SHLIASATLS IPAMILGETA LSFLGLGLRA PAVSWGVMLN DAQNLASIEL YPWTAIPMLP
361 IVVVVLAFNF LGDGLRDSLD PYS
SEQDB ID: 3101377ABV
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAILRYAFYR FGTMLMTLLV VSVLVFAIIN LPPGDYLSNQ IAELKASGQS AGVAKAEFLR
61 KEYALDRPVW QQYMIWMGFM PGPHGFSGLI QGNFGWSFEF DRPVSEIVGD SLWLTVLVNM
121 AAIVFVYATA LPLGVIAAAK ARTWADYTSA FVGYLGLATP NFLLALILYY YGRKYLDIPI
181 GGLMDPAFEG QPMSWAKIQS VLVHLIVPTI VIGTAGASAM MQRLRANMLD ELGKPYVETA
241 IAKGMAPSRM LAKYPLRVAF NPFVADIGNL LPSMVSGSVL VSVVMGLQTI GPTLLTALKS
301 QDMFLSGFVL MFVALLTLIG TMISDILLVM LDPRIRYEGR DA
SEQDB ID: 3101377ABW
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: periplasmic oligopeptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLELPRRAFA LALTMVLAGV LPLRADTVPT LQESVFWGAE VKSGDLPPID QRIPEEPLIV
61 DLAAKGREFG TPGGVMRTMI TRSKDIRQMV VYGYARLVGY DENYNLVPDL LKSYEVEEDR
121 RFTLHLRKGH KWSDGAPFTS ADFEYWWKDV ANNPLLSPAG PPDFLLIEGQ PPRVSFPDAT
181 TVMFEWDKPN PNFLQSLAQA RPPFIYRPAH FLKQFHQDYA DTAQLAAAVE ENRVKSWAAL
241 HNKLDNMYQF DNAQLPTLQP WINASEGKKI RHNFVRNPYY HRIDTRGVQL PYIDIIEMEI
301 VAPGLVAAKS NAGEVDLQGR GLDFRDASIL KKGEADGGYK TYLWQTGVAS QIAIYPNLNH
361 NDDVWRALLR DARLRRALSL AIDRDAINRA LYFKLAKPGA MAVLPASPFF KQEHRDAWAA
421 YDPARASALL DEVGLDKRDG AGIRLLPDGR PMELVIETAG ERQEVENALQ IITDTWREIG
481 VKLVMRPLDR DILRNRVFAG TTMASVWFGW DNGLPQAYTS PAYLAPTDQV FLAWPKWGQH
541 YQTAGQVGEA PDLPEAQRLM ELLHDWERAN NDQDRAAAWS EMLAIHADQI YGIGILAEAP
601 QPIVVSARMR NVPKKGMWAW DPGAHFGVHR MDEFFIQD
SEQDB ID: 3101377ABX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MREMQIMSQP EQSRLDLFID RMVSQRACLE HAIAQTAGLS GPVYELGLGN GRTYHHLRQH
61 VQGREIYVFE RAVASHPDST PPEAQLILGD IRETLPATLE RFGATASLVH ADLGGHNREK
121 NDRFARLISP LIEPHLAQGG LMVSSDRMYF EGLEELPLPP GAVVGRCFIY RRG
SEQDB ID: 3101377ABY
Reference:
3101377
Name: glutathione S-transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLFYDCSTAP NPRRARMFIA EKGVEVESRD ISIAKGEQLQ PAFRAVNSRA TIPVLVTDEG
61 TVLTENLGIA AYLEARFPEP PLMGRSADEK GLVLMWNAIA EQQGGAPVAD ALRNGHPAFK
121 DRAIPGPANH AQIPELAQRG VARVAQFFDL LEERLNESPF IACDHFTLAD ISTFVFVDFA
181 RVIKMRVPEG NTATRAWYEA IKARPSAQI
SEQDB ID: 3101377AC
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAALARTGPG SSDFDLNPGT ILPEGRRLRP AGVLVPVTLA HGAPRVILTK RSSALKHHPG
61 QIAFPGGKQD EGDADVIAAA LREAEEEIGL TRTLPQVLGT LPAHETVTAF TVTPVVAVVE
121 RTFDVRPEPG EVEEVFSVPL AHLMRPENYS VQSRRWRGQR RHYFTVPFGP YYIWGATARM
181 LRGLAERMQQ
SEQDB ID: 3101377ACA
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSHYRVVVI GGGVVGASVL YHLAKFGWTD VVMLERRRLA SGSSWHAAGG IHALNADPNM
61 AALQAYTIDL LSEIEKESGQ NIGLHMTGGL TLAGTPERWE WLQANYRIFQ SIGIDDCELL
121 TPQEAQRRCP IMSTDGVLGA MWADREGYID TTGTVQAYAT AARKRGAEYY EDTKVEQLIQ
181 TADGWQVVTD KGTITCEHVV NAAGLWAKQV GRMAGVELPV SPLKHHYLIT DTVPEVAAAE
241 FEMPMTVDLE GFTYMRQDQK GILVGIYEIN HEHWAMDGAP WNYGEELFQE QLDRIENELM
301 LGFARYPSIQ DVGIKTWVNG AFTFSPDGNP LVGPVPGKRG YWSACAVMAG FLQGGGVGKT
361 LAEWMIHGEP EADAWSMDVA RYGDYAQNKR YIRETTGQFY SRRFVMSYPN EQLPAGRPLK
421 MAPAHDAMTA AGCRWGVSWD LEVPLYFAPS EDFVENLTLK RSNAHPIVAE ECRVIREGVG
481 LLDITGFSRF EVSGPNAEAW LDKLFATKLP APGRARLAVM LSETGRLKGD LTLLNWGDGT
541 WWIMGSYYLR AWHMRWFNDH LDDGVSVRDL GEEICGFGLV GPKSRTVIEK LAEQDISELK
601 FMGCGSFDIG LVRARVARMS VTGEMGYEIN CRYGDHIALR RMLLEAGAGE DICEVGFNAL
661 LSTRIEKSFG IWSAEFTQDR TPGMTAMDRW IAWDKGDFIG RDAAIAERDG NGPARVQVTL
721 EVDAADADAS GYEPVWADGV QIGFVTSGAY GHYTGKSLAM ALVDRDRAHP GTSVSVHVVG
781 VERPATIIAP SPYDPDGKAM RG
SEQDB ID: 3101377ACB
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAGRRGRRA RTEAPASARK VDYRNLRNPF PPMAAFSEDR IEALHEASLS VLEELGIKVL
61 HPGARDLYRQ GGARIDGEMV HIGREMVEAA LASAPKSIRM RGAVPDRDVV LELGRMAFQP
121 GAGCPHATDL ARGRRPGTIA DFRELVQITQ SFDVLHMVPP LVEAQDVPMH LRHMAMTEVE
181 LTQSDKVPFL YSRGTPQVMD GFEMIRDFRG LSDAEFRAQS WCYTIINTNS PRTIDMPMAQ
241 GLIDFARHGQ MAIITPFTLM GAMAPVTVAG AMTLSHAEAL AAITLSQLAQ PGAPVCYGTF
301 TSNVDMKSGA PAFGTPEHFT ASLVAGQLAR RIGLPWRCAG GSAANINDAQ AANETQFGLW
361 GCLLAGATVT IHAAGWLEGG LTVSYEKIIT DLEVLQMVAE LCAGTPATDA DIALDALREV
421 PPMGHFFGAA HTMARYQTQF YEPLVGDWSN FGQWSERGAV DANHRATGIW RGIVDNFEPP
481 PMDPDRVAAL QDFIARRTAE GGAPPES
SEQDB ID: 3101377ACC
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGNIKVTRDD WLNVAMDVLV SDGVEQVKVM NLAERMAVSR SSFYWYFKSR QDLLDALLAK
61 WQATNTAGLI AQTELPAQTI TGAVCNLFHC VVDPALFDTA LDFAVRDWAR RSGKVRRLLD
121 LSDSRRLEAL TAMFLRYDYS QIEAETRARV LYYMQIGYDL AQMNEPIDQR LSFVRHYLFV
181 FTGVQARDEE VAAFSAFARG FWEGRRP
SEQDB ID: 3101377ACD
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNSPDAIIIG TGVIGAAIAF EMAKAGWKTL SLDRNAQVGH GSTAGSCAII RMHYSTFEGT
61 ALAWEGYHYW RDWADYLGLP EGADLARFRQ TGCLVMKTVA NDQMVKHIRC SAELGIPFEE
121 WSAEEVLARL PIYALDSYAP ARRLEDPEFG KPNGGRMGGA VFWPNGGYVT DPALSAQNLM
181 DAARLHGAAL RNRAEVVEIL QAGGRVAGVR LASGEEIHAP VVINVAGPGS AIVNRMAGVT
241 GDMTIQTRPL RQEVVHVPAP EGFDFETQGT IVSDSDIACY CRPEQGNHIL IGSEDPACDP
301 HQWCKDDLDF DRNFTDQWTT QAMRYAQRVP SLGIPSRMRG VVDLYDASTD WIPIYDRSSL
361 PGFYMACGTS GNQYKNAPIA GKMMAALVRY CEEGGDHDTA PLEFELPYIG RRIDVGFYSR
421 KRPVNQESSF SVLG
SEQDB ID: 3101377ACE
Reference:
3101377
Name: pyruvate ferredoxin/flavodoxin oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHPAPALRS YALEDRYNQT TGRVFLTGTQ ALVRIMMDQA RRDRAAGLNT AGFVSGYRGS
61 PLGGLDLEMW RAKTRLEQDR ITFMPAVNED LGATAVLGAQ QAVLDPDCQH EGIFSMWYGK
121 GPGVDRSGDA LKHGNAYGSA PKGGVLVVAG DDHGCVSSSM PHQSDVAFMA WFMPTLNPAS
181 VEEYLEYGEY GLALSRFSGT WVGFKAISET VESGRSVELR PDRQFTLPQI DLPAGGLHVR
241 RADLPSPEIE TRIQAKLRAV RAFAEENPID RRIYDLPNAR FGFVTTGKGH LDLMEALRLL
301 GLDEAKCRAL GIDIYKVGIV WPLARRNALR FVRGKQEVLV VEEKRGIIES QFKEYFYDWP
361 GDKPHRMVGK YDEQGEPLIP WTGELSPLML APVVAARLDA FFPDENLPAR ARALTETPPP
421 VIAVPGATRT PYFCSGCPHN TSTKVPEGSR ANSGIGCHVM ASWMNRDTDG YAQMGGEGVP
481 HVVASKFNGG KHIFQNLGEG TWYHSGSLAI RQAVAAGTNI TYKILYNDAV AMTGGQPVDG
541 PVSVSGIAQT CRAEGVQRIA LISDDIEKFA RADFPAGTTF HDRAELMVVQ KELREIKGVT
601 VLIYEQTCAT EKRRRRKRGK IEDPKRFAWI NDLVCEGCGD CSVASNCLSV EPRETPLGRK
661 RKINLSSCNK DFSCLNGFCP SFVTVEGATR RKRTITLELD QLESGLPEPT LPALSDPFDL
721 LVTGVGGTGV VTVGALITMA AHLEGLGASV LDFTGFAQKF GTVLSYIRLG AKPDTLHQVR
781 IDTGGADAVI GCDMVVSSAP KASAHYRNGT KVVLNRAEMP TGDLVLHRDA QLKIDTREAA
841 IRAVVGTENV SGFDANQTAE QLLGDAVFAN VMMLGYAWQQ GLVPVSRSAL AQAILLNGVA
901 VEKNRLAFAA GRALAADPAR LDVESASPEA EETLDQMLAR RAAFLTDYQN AAYATRFTNR
961 IAALRQALPE ASEALIAEAA RNLFRFMASK DEYEVARLMT ADHFQQDLQA QFEGDVKLTY
1021 HLAPPLLAHR KDARGRPVKR GFGPWLRPVL SLLARAKPLR GTALNPFGYH SEARLHRETL
1081 AWYLALLDRM QQDCTATNEA DWQSVLTLTG EIRGYGPVRA EAAGRIRAEI ASRLDRG
SEQDB ID: 3101377ACF
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLDDRDRRI LTLLQQDSRI SNADLAEAVG MSASALWRRV RAFEEAGVIT RYGAVVDPGA
61 MGLDFEAIVH VHLTRHDPDG IVAFIRAIET APEVQECYAT TGQADYHLRV LCPDLAAYNI
121 FLERFLFRLP AVASAQTNVV LRTIKRNRPV TI
SEQDB ID: 3101377ACG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVKARLFLCV RSVCTAALLM TTSLAAPALA ETDPLDAPMQ EITLGPDDTI RGIVGQYLRD
61 PDLWPAILAL NNIASPAALQ PGTVLRLPVQ QVFAADAALV SSLSAIQKAN AEGARIFAPT
121 QIGEAIRNRD EAVQKREVGD WRQVVGFAGV ATDIAHEALE LSLTQRDRSA EAVVSDVQGD
181 VEGRAPVEPS WSDRQLNDIL VEFERVRTLS ASTTQITFRD LSRLRLNPNS NATIQRMRSD
241 PLTGGEVTKV SLAEGDFYAL LNQLSEKTTF EIEVPGIETT TNSADFWIKN DTTGARFVNY
301 DQPGLEIEEN GRKIDVGQGE GVVITGAGAQ RVTVLNSPRL SAPALGEILY TRTADLAWDM
361 FEGAEAYWLE VAADPGFNQM QVSEWGIRDT GLQVELPPAR YHWRVAALDR LGLPGAWSTA
421 QEFTIRLDDT PPFLTVLSPA PDTIVTTPEI EVLGATELDA ALILNGVALE QGADGSFVTR
481 VALVPGRNMI SVLATDPAGN NSRRDQAVIY RPAAAIEISL SQGMPRVDEA LATRSAQLSV
541 TANSTAEPGA PVVVRNAAGA IALRAEVAPG GAISFTVPVD AAPRSYRIEV LAPDGSVEGA
601 LEFQALRDEL APELTLDLPP PRATAETALA LSGLAEDAVR LELNGSDLPL VEGRFDLSVT
661 LSPGVNTFDL VATDAVGNVT AKRLETLLDI DPPEIASVVL NRPQGDGGPI EIEALASDAS
721 GLRQAAPFLI RIGAEEVEGF LRCDSTNGIC RVSLPPQDGA LELVELMIED YAGNAAFE
SEQDB ID: 3101377ACH
Reference:
3101377
Name: PKD domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEERNMALAR NWTAATLAVA LLAIGSGTGA QTVADEGLLV VYGPQAPSRE GDTDRREQVF
61 FSVPASLAER VYVRVFDPET GGEGDFTYGG SADSETTFRL FGGDGAYSDA DRPEPVADGA
121 REPRLIPYDP VTQPGKMIRE QVWGHDLATD GRWVSLAAVR ARQGEIVGDR AYFRIDVQGS
181 RGNDGNGYSL GVSLARDRDR APEGLEMFSY QPTVRWSAGK PATRVDFTRT APGPLTVQSF
241 DGANGELALI TDYRDLGLRI SGQDFWTSDE VATDETNLAI SLLGGFETPN DVTLAVFDAE
301 GNPVPLSMPP YRAVVPPRPV ARGTGQPLAD CRSVAFDASG STGRTPLSYL WEFDDGARST
361 DPVVAHRYSE PGRYTARLSL LEPGSRPGRG DRIEVPVHVR NAPAAVAGSD IVVAPGQVVD
421 FDGSASQPSD SPITGYRWTF GDGGAAQGPR AQHVYDQPGQ YRAVLRVQDD AVHPCNFGTA
481 VRRVVVNFAP VAEAGTDQSA IVGQAVTLSG AASYDVDGAI LDYRWSMGDG TVLSGETVTH
541 RYEQSGSYQV LLTVTDDSGV VNKIATDGAR IEVNAPPEPR FTIPDRPVSV SEVAVLDASA
601 STDADGQILS YIWDFGDGAM GEGPVASYAW TRAGEFSVTL TVEDDSATAS ALQSITRIVR
661 VDAAPVADAG PDQYVTATEV RFDGGGSVDP DGRVTDWQWD FGDGATASGQ SVTHAYLRPG
721 RYEVALIVRD DSGAPLNTHR DTMWLTINTA PIADAGPPQV VAPGEEFLLS GGASVDPDGA
781 ISDYLWTFPD GQVKQGQRVS HVLDEPGLHR IRLTVADNFA GGAAEDEAEV LITVNAAPVA
841 VAGRDLLIAP GDTVVFDAGQ SFDPDGRLTS YRWEFEDLGA PLEAQRVERA FDAPGVWSAQ
901 LVVADDSGVL NATAADDVTI RVNHPPVAEA GAPVITDQLH VTFDGSGSKD GDGDPLIHRW
961 DFGDGSPPVY GETVTHVFPR AGIFPVTLRV DDGTGLSNAR AIDATAVTIQ ARPMADAGGN
1021 RDVCSGEPIL FDASASADPD GGLLAYEWDF GDGSGSDLIN PTKTYELPGV YPVTLKVRNG
1081 TGTEHGTAVD RIAALVREGP IADAGPDMTV CSNAQVRFDG SGSSDADGAV NAFTWTFGDG
1141 GSGSGATPQH IFRTPGTYSV TLTITGDARG ACSPLDTDVS QVTVIAAPEL KVLGQGRAAA
1201 GIPASFSAGL DQLGGASPEG FSWSISDGTT YEGRDIEHVF AEPGDYLVTL RSRLSGGTEA
1261 CSELEVQRRI IVNAAPEPVI DAPLRVSVGQ SVRFDAGGSS DSDGAIARFA WAFGDGAGAE
1321 GVQAVHRYET PGSYEVSLTV TDDAGVANSQ ITRRQQIEVA PSPVAGLTAR GAVCPGVSLP
1381 WAVSPGGETA VGWAFGDGTV AEGAETRHGF DRPGLMPVRV ELDDGRDLPG SRRAEEIYVR
1441 VNAQPTALAG PDRVVCPGEV VVFDAGGSGD VDGDLTSWRW TFSDGVTLEG ARVERVFDAA
1501 ADLTVQLSVQ DDSGAEGCDI GTDSARILVN GTPQVDAGPD LTVPVGGAHD VVRFDAGAAS
1561 DPDGHGLRLS WSFGDGTEAT GAVVRHRFAN PGSYTVTLRA QDSTGLVCGI GRDTATVTAV
1621 ARD
SEQDB ID: 3101377ACJ
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFPLRLKFF VFAVLLAMGP LALVGQNLTQ LTRDELKSAA NEDLTTVAAE LRATFDNTFQ
61 GRWLTPLTVI RNGVDSADLG VPQKISLLTL GLQELSQVVA LQLSIEGSDL PIIVTNEGFA
121 TRLSEAGLNP VEALATSSEL IKAIAGTGQY GRPVITRLEE TGDWLATLAL PLETRIAGRQ
181 VTMAARIDLG LLGETVRRHP FAQRGEITVV DQAGRRVLTG TPELLDKRRI VASTLPLIVA
241 GARADALEPY VRPDGTAMLG AYAFPDWFPW AVITELSEDN AYAVVNAITR QILTVGLVGF
301 AVAAAAALLF ARQLTRPILM IGQVAQRVGE GDFSARVEDV RARDEIGDLA ARFNRMIAHL
361 GERVELMKFV SHSTMSAIQS AERTGMARGG QRRRVSVIFT DIRGYTEFSE RVPPETVIEV
421 LNSYFDAQTD IVEHYKGDVD KFVGDALVAV FEGDGMEARA VACAVGITEA MARLLEENPE
481 HGLHVGIGVA SGEVVMGAMG ARDRMDFTVL GSTVNLSARL CSKAAADQVL IDRETRDAAV
541 LEDIVYEPLE PIALKGYAAP VPAFAALRKA G
SEQDB ID: 3101377ACK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFLPVTIGSL LLVLGLFQIK HMFADFFLQT PRMLSGRCQY WHLGRAQHAG VHAVGSVLLF
61 LVVGAPVVFA LVIAVVEWVV HFNIDYGKAS YSDRKALQPN QAKYWHAMGF DQFLHQLTYL
121 AMAWAWVEFA H
SEQDB ID: 3101377ACL
Reference:
3101377
Name: ABC transporter, Subunit: transmembrane ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGRDSLGEG RRLRVWRPSC LRPILGVGAI ERTLFRFIWK YSRRDQLILL MVTATLFPLL
61 YLTLELPKRI INDAIGAASS TIEVWGFTFD QVTYLGILCA AFLISVLAHG LMKMRINTMK
121 GVMSERMLRR FRYLLITRVL RFPQPYFERV SQGELVSMIT AESEPMGGLM GDAISQPVLQ
181 AGQMITILSF LFLQSLWFGL AAVALIPLQA WLIPRMQRQI NLLNKKRIQE VRVLAAQIGE
241 NAAGAATLRS NAGWPWRMSM ISYQLGRLFT IRFDIYQKKF FMKFVNNFIG QLTPFLFYSI
301 GGYLVLQGSV SLGALVAALA AYKDLSSPWK ELLTYYNQTQ DMSLRWEVIL DRFAPPGMID
361 EDKFTGFPDE RPRLIGDIVL DKVSVRDADG NLVLDDLDLT LPGGKVIGIA ASSEEDRRAL
421 SELLTREVLP ASGQVRIGEI ALSDLHQMVV ASRIGHATSR PVLFQGTFGD NVTMPVRVRP
481 QGDSGEPGFH AETLRAGNSA DPYHSDWLEP GLAGFDDARA LRDWWLKLVE GLGSGAALYR
541 RGAEQVFAEA DHPDLAARLV ALRPVIQEAA ERAGLAGQAH FFDPDHYNPA LPVAENLLFA
601 SPRAPFTPEV LAGQTDFLEQ IRQIGLDEPL VRLTQDVIDM LRQIFGLDGT DHPLFRKMNL
661 DVRTYETALE LVEKTRDAGA RALEDDQLAS LLAVPFRISA DQIGPAFSDQ IKARILELRK
721 SHSSELMRSL DDVFAPLDPG AFAPGLNVLE NALFGKVSEV GGARSDELRK LITDLLDEHG
781 LRPQVIQLIY DLPVTLGGQN VPAIFAEPLA FTRATIKRPD ILLLDRALAS YDMQTQIAVY
841 RNLRALLPET TLIYLNDAFE NPDVFDLYVE VQQGRIVTEE VPRQQEEEDS VASADLSRKV
901 RTLEQTPLFS GLDRRQLRLL AFGARWYSAK AGEVVFLKDD EPTDGAYMMI EGEAGLYLPR
961 EGQEDQLIVT VGPGRLVGEL GLIRKEPRAL SMVAATDITC LRIGEEEFLA VVENDAATAF
1021 KLLQVVAGYV SN
SEQDB ID: 3101377ACM
Reference:
3101377
Name: acyl-CoA dehydrogenase, Class: EC1.3.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acdA-1
Sequence:
1 MTCSSPFMTP ERQAFRDTLA AFFATEVTPH VEEWEAAQAV PWELHQKLGA LGVFGFGIPE
61 EYGGLGFDDA FMRCDYAELA FGCGASGVAA AVGGRMISLG PMVQFAPEPF RQDILPRIVR
121 GEMNSALAIT EPGGGSDVAN LSTRAARVAG GWVLNGAKAY ITGGMDAQWF VVGARTGGPG
181 LAGISLFLIE ADTPGFSRTP LGGKMGWHCS TQAMLHFDDC HVPEAALIGP ENKGFLAIMN
241 NFNHERLAMV AGSLGMMRVC YRSALDWARE RRTFGQRLIE HQVIAHKFAE MSARIDMTEA
301 YLERICWAMN QGLMPAAEIA KAKVQATKAL EFVASEGMQI FGGAGYLTGN PVERVWREVK
361 VMAIGGGSEE ILRDLAVRQM GLAGQ
SEQDB ID: 3101377ACN
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPETLKPTQQ DRRSRSTQAK VIRATITCLD RLGYAETTFA RIQERAGVSR GAITHHFPTR
61 QALVAATAME LLSRALDPVE RRAAQAASPE PVRDLITRAW GQVVNAAGGR AMVEILVACR
121 TDAELYRLLE TRLHDWDHQS RASVARAYVG ADQAADDAEL LWSMTRNFLR GLVLHERFVT
181 DPAYLARMVD RFAGMMESQL TPLTAKDAL
SEQDB ID: 3101377ACP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAALRIGGA CGFWGEAPHA TAQLLAAGVD VLVYDYLAEI TMSIMARARL KDPDQGYATD
61 FVTEAMVPNL TAIAKQGVRV LSNAGGVNPE ACAEALRERI AAAGLSLRVA VVTGDDLLAR
121 ASEFVKCTEM FTGAAMPPLE RIASMNAYLG AAPVVAALRA GADIVLTGRC ADSALTLAAC
181 VHHFGWDLSD HDRLAAGSLA GHLLECGPQA TGGNFTDWEV AGDLARIGYP IAEVAADGGF
241 VLTKPEGSSG LVTPATVGEQ MLYEIGDPRA YLLPDVVCDF SGVTLEQAGP DRVRVSGARG
301 RAPTGRLKVS VTWADGYRGG MVFQMTGRAA RAKAQAFAQA GLDRAQARLA ALGAPGYREV
361 SFEAFGGRPA PDAPEEIAFK AAVRHDDARA VGLFLKELVG AALATPPGLH FFTGAGRPRP
421 SPVVALFSCL IPADAVRASV VLDGADLSFD APAPPLRDIE EGLAPCPPEP DMELELEMRP
481 LEALAWARSG DKGDSANIGV LARRPDYMPY IWAALSPEAV MRFFDEKSPA QIQRFYLPGC
541 HAMNILLTGA LGGGGVASLR NDAQGKAFAQ ELLSLPVPVP VGLITTD
SEQDB ID: 3101377ACQ
Reference:
3101377
Name: Ac-CoA carboxylase carboxyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFISQLDKD SDCYRRNRAD MLALVDQLRA LEARPMALSE ERRARMEARG QITPRDRLAR
61 LLDPGLPFVQ LHSLAGYMVD SADPETSVPG ASVIIGIGFV SGVRTVVVVD DSGIKAGAMT
121 EMTAAAFLSA QEVALKQRLP FLHLVESAGA NLMEYRVELW AHGGKLFRNL ARLSAAGIPN
181 IAVLHGPSTA GGAYMPGLAD YVVGVRKNGM AALAGAALVH AATGERANDR DLGGSEMHAQ
241 TSGLVEYLAE DDAHGIEIAR QVVAALDWNK SLPERPAPAD IAPPLDPEDL AGLVPVDYRV
301 PYDMRELAAR VVDGGVFQDF KPRYGVSTVC LQAAIQGIAV GIIGNNGPID PDGATKAAQF
361 IQLCGQSDTP LIFLNNTTGY MVGTAYEQAG MIKHGAKMIQ AVTSVDVPRI TLYVGASFGA
421 GNYGMSGYAY EPDFLFAWPN ATTGVMGGEQ AAGTMAMVAR AGAARKGQDL DEARLAKQSA
481 MIAAHFDQQS DAFYTSGRCL DHGVIDPRDT RRVLAFCLHT CREARARRVK PGSYGVARF
SEQDB ID: 3101377ACR
Reference:
3101377
Name: Ac-CoA carboxylase, Subunit: biotin carboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRFDTLLIA NRGEIAVRII RTAREMGLRT VAVYTTADAG APHVALADHA VWIGEGPVGD
61 SYLNADRILD AARQSGAGAI HPGYGFLSEN AGFARAVAAA GLVFVGPDAA AIEAMGNKAE
121 AKRLMLAAGV PCVPGYQGAD QSDAALTREA EQIGYPLMVK AAAGGGGRGM RLVEGPGALS
181 EALARARAEA LGAFGSDELI LERAVVEPRH VEFQVFGDAH GAVIHLGERD CSVQRRHQKV
241 IEEAPCPVMT PELRDAMGAA AVAAARAVDY RGAGTVEFLL DASGGFYFLE MNTRLQVEHP
301 VTEMVTGLDL VALQLQVAQG DPLPLTQDDL RIDGHAIEVR LYAEDPAAGF LPAIGPVLRW
361 RPAAGAGLRV DAGIAQGQQI APHYDPMLAK IIAHGPSRTV ALARLARAVA DTVLLGTATN
421 SAFLADLLAL PEFAEGQATT GLLARSYPEG YGAGAPDPRA VALMVAVLMQ HDRDTALAAA
481 GPIPPELLGW SSAPVLPRSL RVETGGQVFD CTAGAVPGGW RIGVADAQFE IALVHREDGL
541 RARLGGETHD LLAHVSGDTV HMASGAQRLS LRRQRPGAPD AEALGGGRVT APMPGLVQAV
601 SVSEGAEVAK GQTLAVLEAM KMQHQITAPV AGRVARQHVA PGAQLAAGDV MFEIEEEESA
SEQDB ID: 3101377ACT
Reference:
3101377
Name: oxidoreductase, Isotype: 2-nitropropane dioxygenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNSDLCRKLG IEFPLFAFSH CRDVVAAVSR AGGMGVFGAV LYTPEQLRTE LEWIDANCGG
61 KPYGVDLIVP TSIQRQGGSG PSDDQLLAGL PAEHLAFAEQ VLERAGVGAD DLEERRCALL
121 HISRNLDSAG AEAMLDVAFS FPIRLIANAL GTPPQIMLDR ARAAGVPVAA LVGSKQHAQR
181 QVAAGVDILV AAGGEAGGHC GEVSTMVLVP EVVSVAGDTP VLAAGGIVTG RQMAAAMAMG
241 AAGAWCGSVW LTTAEGEPSQ VVKDKMLAAS SSDTVRSRSR TGKTSRQLKS AWTDAWEADG
301 PAPLPMPLQS LVAEPALARI EALAQRGHAG AADLATYWVG QGVGLMTQTT SAAEVVQDFK
361 RDYLAATERL MATLED
SEQDB ID: 3101377ACU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEQAGDFLAE CQALDAVLDG VSGADWDRPT QFKGWTLNDV LVHLHFWNRM ADLSLTDPAA
61 FQARAAETLA GIGRDGFRAT ENAMITERGA DLRAAWAAQY TDMAERWAGL DPKQRLQWVG
121 PEMSARSSIT ARQMETWAHG QEVFDCLGAT RTETDRIRNI VVLGVNTFGW SFKVHGRPQP
181 EMMPRLELTA PSGALWQFGE PGANRIAGPA VEFAQVVAQT RNIADTSLVV EGPLAAEWMA
241 IAQCFAGGPE TPPAKGARHR VAG
SEQDB ID: 3101377ACV
Reference:
3101377
Name: acyl-CoA dehydrogenase, Class: EC1.3.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acdA-2
Sequence:
1 MSLFSSTAAW VTDEHRMFAE AAGRFLDDEL VPNIETWVDN GVVDRDFWRK AGETGLMAGA
61 IPEEFGGVGG GMGFDAVTIY EQTSRGDAGW GYGIQSIVTH YITAYGSEEQ KAKWLPGLAS
121 GEMVGAIAMT EPGTGSDLQA VRTTAEKDGN SYRINGSKIF ITNGQTADLI IVVAKTDKTL
181 GSKGVSLIAL ETEGAEGFRR GRNLKKLGMK ANDTAELFFE DVKVPMTNLI GPEEGHGFYQ
241 LMKQLPWERL TIGIMALGAI DFALAETVKY VQERKAFGQR VMDFQNTRFK LAECKTKAEV
301 LRSFVNDCIG RLEAGQLDAA TASMVKYYGS EVQNEIMHEC LQLFGGYGFM MEYPIARLYA
361 DARVQMIYGG TNEVMKELIA RSMDV
SEQDB ID: 3101377ACW
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAPRRFLPS ISSLLALEAV DRLGSASAAA EELALTQSAI SRQLKTMEEQ LGVELVQRDR
61 VRLHLTPAAR EYVQTARAAL TQLAQASLKL KANPTGGTLS LSILPAFGMH WLAPRLQDFA
121 RRHPEVSVNL STRLKPFDFA SEPFDAAIHF GRRDWAGVDY LKIMREEVLP VCAPELRQKT
181 SDPTWLLSAP LLHLDTRPDA WERWFAVHDL AAPGLRGMLF DQFSTMIPAV ANGLGVALLP
241 SYLVTDDLAR GRLVTACDGP AVSLGSYYLV WPKERMIAPP LASFRVWLQE AFA
SEQDB ID: 3101377ACX
Reference:
3101377
Name: Asp aminotransferase, Class: EC2.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aspC-1
Sequence:
1 MNISSDTGFR RAGRLDGIEL SEIVQISERV AQLRADGADI VALSTGEPDF PTPTHVIEAA
61 HRAALAGQTR YPATAGTPAL RAAIAAEAGV EPANVIVSTG AKQVLAGAFL ATLDPGDEVI
121 TTAPFWTSYA DMVRLAGGVP VVLDCPGAQG FKLTPAQLEA AITSRTRWLL LNTPSNPTGA
181 IYSEAELQAL GAVLDRHPHV WVISDEIYQH LAYVPFTPFV QAVPTLADRT LIVNGVSKAY
241 SMTGWRIGWG IGPAPLIKAM VAVQGQITSG ACSIAQAAAL AALSGPQDLL VERRAEMLAR
301 RDLVVAGLNA AGLECASPDG AFYVFPKTPA RMPVDHDFCH HLLDTAGVAL VPGRAFGMSG
361 HLRLSFAYAR QSLEEGLARI ARAVAAL
SEQDB ID: 3101377ACY
Reference:
3101377
Name: dehydrogenase/transketolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPSIKEGPA MDRAQIVHEN FLSRVAARDL PKGAPPRPGL TQAQAVSLYR AQVLSRALDR
61 TSRAMQKAGQ GFYTIGSSGH EGMAAVAQAL RPTDIAFLHY RDAAFQIARA EQVPGQQIAW
121 DMLLSFACSK EDPASGGRHK VLGSKALMIP PQTSTIASHL PKAVGAAYSL GAARRHPPEH
181 RQLPEDGIAM CSFGDASANH STAQGAINTA GWTSVQSIPL PLLFVCEDNG IGISTKTPRG
241 WIQASMEHRP GIRYFQANGL DIYETYAVAQ EAADYVRNRR KPAFLHLKTV RLYGHAGADV
301 PTTYLTRAEV EAEEAMDPLL HSVRLLAEDG ALASEEALAI YEQTCARIDR IAVEAATRPH
361 LASAAEVAAS LIPPKRECKP TNGPGAEMRA ATFGGDMRAM DEPQPMSRLI NWALTDLMLE
421 HGEIVCMGED VGRKGGVYGV TQKLQQRFGP DRMIDTLLDE QSILGLAIGM GHNGFLPIPE
481 IQFLAYLHNA EDQIRGEAAT LPFFSNGQFT NPMVLRIAGL GYQKGFGGHF HNDNSLAVLR
541 DIPGVIIACP STGEDAAQML RECVRLAREE QRVVVFLEPI ALYPMRDLHG VQDGGWMTPY
601 PSPDRRIALG EVGVHGNGTD LAIVTYGNGH YLSQQAVPEI EAAGIRARII DLRWLAPLPI
661 EALRAATKDC KHVLIVDECR RTGSQSEALM TFFCEESRAT STARVVAEDC FIATGPAYAA
721 PLPSRDGIVA AALSLTGVAK
SEQDB ID: 3101377AD
Reference:
3101377
Name: poly(A) polymerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRIDEAWLT EPATQQVCRA LTEGGAQALF VGGCVRNALL GAPVSDIDIT TDAHPERVMA
61 LAAAAGIKAV PTGIAHGTVT LVANSIPHEV TTFRRDVETD GRRAVVAFSD SIHEDAARRD
121 FTMNALYARP DGTVLDPLDG LPDLQARRVR FIGDATDRIR EDYLRSLRYF RFHAWYGDAE
181 AGFDAEALAA IAGNLDGLSR LSRERVGAEM LKLFAAPDPA PSVAAMRAAG VLAQLLPGAD
241 DRALAPLVHL EDGLGADPIR RLAALGDGEA LASLRLSKAQ MALLDTLRRA ALGTAGAGEL
301 GHELGVEAAR DALLLRAALL EQPLDPHAPA AIARGAAAVF PVTARDLMPA YSGPALGARL
361 ATLKARWIAS DFSLSRAALL VDKD
SEQDB ID: 3101377ADA
Reference:
3101377
Name: acyl-carrier domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRTAVVICP GRGTYNKPEL GYLHRHHGAR MDMFRAFDAI RGEAGQEAVT ALDGAERYTV
61 GKYSRGDVAS PLIYAASLGD AQALAEDIEV VAVTGNSMGW YIALAAAGAL SAENGFRVVN
121 TMGTLMQERL IGGQLVYPFT GEDWADDAAR KAALLADVAR IDALPGHDLA LSIDLGGMLV
181 LAGNEAGLSA FEAAQPVVQE RFPMRLANHA AFHTRLQAPV AAEGRQRLGA DLFTQPIRPM
241 IDGRGKIWCP GATDTGALWD YTLGHQVTEP YDFTRAVQTA AREFAPDLFI VTGPGATLGG
301 AVAQSLVLAN WRGMGDKAMF QARQAEAPLL VAMGREDQRG LVTAA
SEQDB ID: 3101377ADB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDNTRTLWH LTSAEQVTAP PLAGDVTADL VVIGGGFTGL SAALHAAEQG ADVRLVEAEA
61 PGHGGSGRNV GLANAGLWLP PDDIRAHLGD AVGNRLIALL AGAPALVFEL IARHGIACEP
121 VRSGTLHCAH SPSGLADLCR RHAQLTASGA PVELLSAEET TRRTGSGAFH GALFDPRAGT
181 IQPLAYACGL ARAAQAAGAR LHGQSPALEI EHKDGAWQVR TSGGSIRARK LIQATNAYHR
241 GLADRRPAHV PVHYFQYATD PLPEKTRAAI LPGGEGCWDT GLIMTSFRLD RAGRMIIGGM
301 GALDHPASGI HRAWVRRKLA QLYPALSRQP LVTGWHGRIA MTGDHIPKIT RPGPGALAAH
361 GYSGRGIGPG TLFGKAMAEA LLSGIETNLP IPAIDRHAER WTALQQAYVE TGATLMHLIR
421 ARVGY
SEQDB ID: 3101377ADC
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKFDFTDLD GKVLRCFLVI LEESSVSRAA DRLGVTQSAV SHTLAKLRAV LGDPLFVRSG
61 QGLTPTERAL SLREPVQRVL DGIKSLTDAR PFDPLGEEMH FDIAANDLQR ELIFPELLCR
121 ARAEGVRLSL GFVPSGVPDP ALLRSDRCQL VLTPLPPDGP DIYQRRLFTS PLQIYYDASH
181 RSPPDSWQSY CAAEHVEVRF IDGRSANVVM RGVDQSQIRP PTVVLPHFGA IPAFVKGSDL
241 ISTDTALMKL GPLATLDCAP LPFACDPVSI YMVWHERSTA DPAHRWLRAR VEAIAARLQR
301 SAQ
SEQDB ID: 3101377ADD
Reference:
3101377
Name: oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: NAD-binding/Fe-S cluster-binding protein
Sequence:
1 MVLLSIPRYA KRAVRRRRMG IRFFSDRDRP VHMGPYPLER LARREAVADL STVPQIPVLS
61 FHRPERPESI VNAMGEFQAM LDAIRDGLVN PARAEISADP LERANHLKAF GYFNDASMMG
121 CGPLPAEALL PAPRRNPDID RLAEALRTRQ TKTLASGIDV IMADLKESME APPRPIDSHR
181 HAIVFLYEHH RDPEADEPGA EWIHDAQDHR ACLLASENAV VIANYIRLLG YDARAHTAMS
241 SDVDLGRLAL AAGLVTLEGG QLAAPWLGRR FGLAAVTTEM ELAHDRPLAP LAAQSWAATR
301 GPAWWLGKGF AKSALNRDPY ARRRYVDGAH PFERLNRVET PTTYIDEANV ARVPKRADMF
361 ARAQFGDMGK ALQEGAKGGH YVRKAAPSFA QRRALGAFVL LQDGDRADVP RPIDPRRNAA
421 NLKAASYFLG IDAVGLSRCP TWAWYSHDAT GEAITPPHDQ AISMIVDQGY ETMEGSSGDD
481 WIAVAQSMRA YLRFSLLGGV IAQQIRNLGY KAKAHTVMDG EVLQPPLLLL SGLGEVSRIG
541 EVILNPFLGP RLKSGAVTTD MPMSHDKPID FGLQRFCEAC NKCARECPSG AITAGPKRMF
601 NGYEIWKSDS QKCATYRITT QGGAMCGRCM KTCPWNLEGL FAERPFRWAA MTVPAAAPAL
661 ARLDDALGHG GLNEVKKWWW DIELQPDGAY RPTTGPVNRR GLQRDLDLKY EDQTLAVYPA
721 PLAPHPWPYP FPMDREAGIA AYQAMIGADE YRARLAAGDL SVVHRYTVPD ADTAPVIRVE
781 VTRAEKMTGE ITKYEFAAPD GAPLPEWTAG AHLDVLVAPE FLRQYSMSGD PTDRTTYQIG
841 VLREEEGRGG SKLMHRIFAP GRRVFISKPI NHFELDEGAT RSFLMGGGIG ITPMIAFAHR
901 LHALGADFEL HYSVPSRTSA GYLEDLDAMP WADRVHLHVS DEGSRADLDA VLAGFQPGWH
961 VYTCGPERFM DGVMQAAERQ GFPEEARHLE YFSVPEQPAY ENHPFTLKLA RTGREIAVPA
1021 DKDAAQVLNE NGIHIDVKCS DGICGVCKCG LIAGAVEHRD FVLSGKQREG AIILCQSRAA
1081 EPGGVVEIDL
SEQDB ID: 3101377ADE
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPSTQPTP TLADVARRAG VSTATVSRCL NTPDRVIEET RNRVLEAVRE LGYSPNFGAR
61 ALAAKRTNTI GAVIPTMENA IFARGLQAFQ EELRLKGITL LVASSSYRAD LEEEQIRTLV
121 ARGADGLFLI GAHRDPALYD FLNRRGIPTL AAWVHDPDAP VPTIGFDNHA AMLDLAREVI
181 ARGHRRIGVI SAEQASNDRA RARVAAIRAA MAEAGLGADT LSLVETAYGI DEGAAAFDTL
241 MQRTPRPSVV MCGNDVLAVG AMGRAKETGY DVPGDVSITG FDDIELAKVC SPGLTTVHVP
301 HRQMGTQAAQ ALVAMVAEGA PGQGQRLDTY VVLRGSLAPP RA
SEQDB ID: 3101377ADF
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDDRTGLAS ATRRNFLKLA GSGSFTAALV AGAAGTLWST EAAAQTAKEE KEREAAASHV
61 MTVATAYVLG ASRSYPIMQL DLKENIQNAT NGKVYVKLAP GGQLGAGGAL VQKVQGGTIQ
121 AAQHSLSNFA PFASAVDLIN MPYFCGSNQR FTNLVSSDAW KTEVHPKVEA AGFKALFYIV
181 IDPRVVAVRK GGNAVITPGD LAGVKFRVPG SKMLQQYYRM VGANPTPVAW GETPSAIKQG
241 VADALDPSVG ALYVFGFKDI LSHVTFTQAV PDSQVFSMNL EWFNGLPADV QEGIMFAGEV
301 TSQQNLAKVP AARAYAMSEL TKSGVEFHSL SADQLAEWQA TGGYQRSEWD SFKTELAGSM
361 DAFNRLEEAA GTMGRYYVHD A
SEQDB ID: 3101377ADG
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLARREGHV TPILNALNRN AERWALLVFY VMLVVTMAVE VLRREIFAYS SIWGEEIVRY
61 SFIYLAWIGA ASAVKERGHI RIDVLMHYLG RRAKALLYIF GDLVMFVVAV IALYWSFETV
121 LVSAKFGSVS HGLRISMVWF LMAVPVGFSL MVLRLVQSFL RDLRSLRDGT PVYEGDKLFD
SEQDB ID: 3101377ADH
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLWNTLNQTV ELGWDFYLPV IMFVGLIALA VPVWAAIGAA AITMLIMSGD MPLSAVGESL
61 FTGIDAFALT AVPLFILTGD VLVRTGLSRK FLDVAEALTQ FAKGGFGSAT VLVCGMFAAI
121 SGSDAAGAAA VGRMTIDRLV ESGYPRPYAC ALVAAGACTG ILIPPSIAYI IIGLVLGISA
181 STLFLAALIP GLCILISILV TNVVMNRING WEGGGNISAG EYFGNLGRSL KSGWYAFIVP
241 GIIFYGIFSG RLTPTEAGAT AVVVTVLMGF ILRTLSLSDF PAMLVSSAKV NGVILPIIAF
301 SAPLAEALAI MGVPQGFVAA VTGMTDEPWL LILLMIGILI AAGCVMETTP NIVILAPILK
361 PLADNIGMNE IQFCIMMITA LGVGFITPPL GLNLFVVSGI TGESILKIAA RAVPFVLFML
421 LVVLLIAYLP AISTTLLPDI YK
SEQDB ID: 3101377ADJ
Reference:
3101377
Name: His-ol dehydrogenase, Class: EC1.1.1.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisD-1
Sequence:
1 MTIEYLKKAS LTSKSDASDV QETVRAILAD IEAGGDQVAL DYAAKFDRYE GSIILSPEEI
61 EAACAKVPEK LKADIRFAHD NVRRFAETQK ATLTDVELEV VPGVITGQKA IPVDAAGCYV
121 PGGRYSHIAS AIMTVTTAKV AGCKHIMACS PPRPGVGVAP AIVYAAHICG ADTIMAIGGV
181 QGVASMAFGL FGLPKAKILV GPGNQFVAEA KRMLFGRVGI DMIAGPTDSL ILADRTADPH
241 IVTTDLVSQA EHGYNSPVWL VTDDRALAEK VIEMIPSYIA DLPEVNRDNA AAAWRDYAEV
301 ILCADREEMA ATSDRYAPEH LTVMAEDLDW WLDRLSCYGS LFLGEESTVS YGDKAAGTNH
361 VLPTSGAASY TGGLSVHKYM KIVTWQRGTR EGYKPVAEAT ARIARLEGME GHARAADVRL
421 AKYFPDETFD LTANG
SEQDB ID: 3101377ADK
Reference:
3101377
Name: gluconate 5-dehydrogenase, Class: EC1.1.1.69
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gno
Sequence:
1 MADSGYLFSV RGRVACVTGA SSGLGRRAAT VLAQAGAQVV GVARRADALA EWQAEAGGET
61 HAIPYDLSDR DGLEGLARQV VDPFGAPDIL VHAAGINTRQ PADEVTPEGW DITLTLNLSV
121 PFFLSQYLVP GMKARGWGRI VNFASLQTTR AFPGGIAYGA SKGGVAQMTR AMAEAWSPHG
181 ITANALGPGF FRTELTAPVF ADPERAARNA AQTCIGRNGE PEDLDGPLLF LCSQASAYVT
241 GQVLMVDGGY TAK
SEQDB ID: 3101377ADL
Reference:
3101377
Name: sorbitol dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKALVYTGPE TLALREMPNP VAGPGEQLIR IARVGICGSD MHAYLGHDAR RPAPLILGHE
61 VAGVIVGGPR DGERVTVNPL VTCGACPACR EGRDNLCPTR QIISMPPREG GFAEYVAMPE
121 GNLVTVPDSV PLAQAALAEP LACGWHTVRL SLAALSGARD TALVLGGGAI GLGAALCLTA
181 QGVPQVTVVE PNPARRAYLS DRCGQHALDT PPAGSQYDLV IDGVGYAATR ATASAHVRPG
241 GVIGHIGLGE DTGGLDIRRM TLQEITFIGT YTYTSEDFRQ TAQAIFDGRL GPLDWTEARP
301 LDQGAAAFAD IRAGRVAAPK VLLVPDTAPE RS
SEQDB ID: 3101377ADM
Reference:
3101377
Name: universal stress family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYHRILVALS LEHGISERAL ETARALAAEG ASIRAVHVIE PPNPAVRAYL DADLVAKARA
61 DAEARLRARV ADAPGVEPVL LSGHSSRALT EYATDMGIDL IIVGSHRPGL SDYFLGTTAA
121 RVVRHAPCTV MVLR
SEQDB ID: 3101377ADN
Reference:
3101377
Name: FMN-dependent alpha-hydroxy acid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRQTGIHSS EDARRLARKR LPWMVFDYVD GAAGEEHGAM LARRAIQDIR LTPRVLRNVS
61 RRELRVQLFD KLAVRPFGIS PMGMCNLSAP DADLMLARLA ARDRVPHGVS TVASTDMETL
121 LKASGGMAWF QLYFSGDGSG TMKLVERARA AGYGTLVLTV DVPEVGRRPR ELRHGFKMPF
181 RIGPRQFVDF ALHPRWSLST LIRGRPQMAN FDGRNYVFDR TESRAAADWT TFETLRATWP
241 GKLVVKGVLH PGDALRLKAL GADAIQVSSH GCRQLDAAPP AIEALAAIRQ AVGPSYPLFY
301 DSGIRSGEDV VKAYAMGADF VFLGRPLLYA MAAGGEAGLH QLWEVLAQEV SLTLAQLGLT
361 EMAALREGAA R
SEQDB ID: 3101377ADP
Reference:
3101377
Name: agmatinase, Class: EC3.5.3.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: speB-1
Sequence:
1 MSIFLDSELT TAERGEDARF RIIPVPLERT VSYGSGTAGG PAAIIEASNE LERITNGAEP
61 CAQGIYTEPP LDCDGPLPEV MERLAQRTEA AIRAGRVPVM LGGEHSLSFG AVMGVARALG
121 QPLGLVQIDA HADLRIAYQG EKHSHASVMH LLAEEGIRLA QFGVRALCQQ EMDERARHGV
181 FYKDAEELVT TNIHAIDLPE DFPQLVYVSF DVDGLDPAQM PATGTPVPGG LGYYQALHLV
241 EHALKGRKCV GLDVVELAPD GNAAWDFTAA QIVYRLMAAC TA
SEQDB ID: 3101377ADQ
Reference:
3101377
Name: carboxynorspermidine decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nspC
Sequence:
1 MPEMADVMQT QAGDAGAFRH FDLSRVPTPC FVVDEVAIER NLKILRDISD RSGAHVLSAL
61 KAFSMFTLAP LVRQYLGGTC ASGIYEARLG REEYGGEVAT FCAGYKEQDI DEILSLSNHI
121 IFNSPAQKDR FLSRAQAAGV QVGLRINPEH SEGEIAKYDP CAPCSRLGTP VSLLTPETLK
181 GVDGLHMHTL CEQGFEPLLR TWAAVEPKLA PYLPGLKWLN FGGGHHITRA DYDRDALIDF
241 LKSLRARHGL DVYLEPGEAV ALDAGILVGE ILDLPSNGMD LAITDISATC HMPDVIEAPY
301 RPALMDEADS GHTYRLGGPS CLAGDVIGDY TWDQPLTIGQ RFAFLDQAHY SMVKTNTFNG
361 VPLPTIALWN SKTDALRIVR QFDYSDFKDR LS
SEQDB ID: 3101377ADR
Reference:
3101377
Name: saccharopine dehydrogenase, Class: EC1.5.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKTLVVGAG GVSHAAVHKM AMNSDIFTEI TLASRTKAKC DAIAASVKER TGVTIQTAAL
61 DAMDVAATVA LIKETGAEIL VNLALPYQDL KLMDACLEAG CHYLDTANYE PEDVAKFEYH
121 WQWAYQDKFK EAGLTAILGS GFDPGVTSVF ATWLKKHKLA TIRQIDVLDA NGGSNDQAFA
181 TNFNPEINLR EVLAEARHWE NGAWQVTPAM THKVEFDFPG IGPKNMYLMY HEELESLSAH
241 FPEIERARFW MTFGDAYIMH AKVLENVGMT RIDPVMHDGK EIIPIQFLKT LLPDPGTLAE
301 ETKGKACIGD IATGQAKDGS GEKTYYIYNI CDHEECFREV GSQAVSYTTG VPAMIGAAQV
361 LKGNWVEPGV WNMEQLDPDD FMDMLNNHGL PWQVHELDGP VSF
SEQDB ID: 3101377ADT
Reference:
3101377
Name: Arg decarboxylase, Class: EC4.1.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: speA
Sequence:
1 MSAPQVWPWT NQTPPLKGDP TPEPKPQERP TRLKHPLDAP HSVYGVDKWG KGLIVVTEEG
61 EIGLKNPLRP EADAVSLPGI LHDLEQRGIR APMILRISSY LENEICHIND SFADAIARSG
121 YKGAYRGVFP IKVNQQAQVI DRIVEFGHRY SYGLEAGSKP ELVIALAHKL ATDALIVCNG
181 VKDAEFVRLA ILSRKLGFNT VIVLESPKEA DTVIAVYEEL GIEPLLGVRV KLTNQISGKW
241 EESSGDRSSF GMNTDQLVRV VDKLRDAGLI HCLKLQHSHL GSQVPDVNDV RRAVGEACRY
301 FTELSAEGVP LTHLDLGGGM GVDYTGEKRA TENSINYTVE EYCANVVETV AYAMDEAGID
361 HPTIVTESGR AVVATSSLLV FNVLESTLYD APTAPGTEPD DHHLVSDLAA VNGYLTPARL
421 QECWNDATFY RNELRALFRR GYVDLRQMAR AERIYLSLMA RIKTMVAEVE AETDLDAQME
481 KIADIYHCNF SLFQSLPDVW AIDQLHPIVP LQMLNEAPDR RAVLSDITCD SDGKVDRFIL
541 ADGVSPSLPV HSLPEDQDYY LGVFFVGAYQ ETLGDLHNLF GDTNVVTIDL RADGGFDLLH
601 EQEGDTISEV LSYVEYDPAD CVAAFRKLVD GAISNGCLKA SERKLIIGAY RDSINGYTYY
661 E
SEQDB ID: 3101377ADU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTQKIWDLH LTYDGPLSQE FLTGTRQLAE SIAQEPGIVW KIWTVEDGTN HFGSTYLFRT
61 LDHLETYKKM HLKRLADFGI RVVSDHVFDI MEELSAIDNA PLQG
SEQDB ID: 3101377ADV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNKTFLTAH GVIYMFFALA LFFAPALLWP NYGLQLNDRY AVFLSQHNSI FLGGIGVTSF
61 LFRHVAQGSE AARTFLTGLI WTNALGVVIT LYACLTGIFS GFGWSDPIFF ALLAVLSFMQ
121 LGKNR
SEQDB ID: 3101377ADW
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHKTQDREN QALVLALLRS QQLFMRAMGP VFRAHGLTAP QWDALETLAN KGPVSMNDLM
61 RFTLSTSGNL DVVIKNLIQA GLIEKSVDPE DKRGRILQLS PEGRRKVDDF IPIHNQALDQ
121 LFSGLGTAGK RQTITALNQL RKTLTQAPRG
SEQDB ID: 3101377ADX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQCIVAAAA SGPVLVCDEG LSFWGGVDPE TGRVIDAHHP QHGAALAGAV VMMPTSRGSC
61 SGSGVLLALA LNGHAPAALV FREGEDVLTL GALVAAWMYD RPVAVLRLSA AEYAALAMEP
121 SAEVTPERLT AGALSLTLEP LSGETLDLSD ADRAMLSEEA APPVRLAMRI ICAMAAAQGA
181 ERLTDVSRAH IDGCIYHSEA NLRFAEDMAA MGGRVCIPTT MNAISVDHAN WRAQGVPPAF
241 GGPASRLADA YLRMGARPSF TCAPYLLDDI PQAGEAIAWA ESNAVVYANS VLAARSVKHP
301 DYLDLCMALT GRAPLAGVYL DANRKAQVEI RVERPEGADD AFWPLLGYLA GRLAPDRIPL
361 LTGLEGSAPS GDDLKALCAA FGTTSAAAML HVAGVTPEAD GALTDGAAHM AIAPGDFARA
421 WDQFNPGPQR VELVAIGSPH ASAHECRVLT DLLDGHRIAD GTATIVTIGR GERDKLAGDG
481 VLARLQALGV QVIPDLCWCS VTEPVLPPAT RTIMTNSGKY AHYGPGLSGR AMRFGSLAHC
541 AEAALTGYAP GRPGWINGQD RV
SEQDB ID: 3101377ADY
Reference:
3101377
Name: Pro racemase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSSKTIHVI SAHAEGEVGD VIVGGVAPPP GETLWEQRNW IARDGRLRNF MLNEPRGGVF
61 RHVNLLVPPK DPRADAAFII MEPEDTPPMS GSNSICVATV LLDSGLVEMV EPVTELVLEA
121 PGGLVHVRAE CRDGKAERIF VRNLPSFAAQ LDVSLDVPGL GRVRVDTAFG GDSFVVVRPQ
181 DVGVEITRDR ARDLAEMGIA ITNAANAQLG FHHPENPDWR HISFCLFAGG IERRDGILRA
241 ASAVAIQPGK IDRSPTGTAV SARMAILHVR GDMAQGEQFI ATSIIGSEFS GRIAGLTSVG
301 ERPAILPEIS GRGWITGMHQ HMLDPADPWP DGYRLRDTWG V
SEQDB ID: 3101377AE
Reference:
3101377
Name: ABC transporter, Subunit: transmembrane ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRFFENLVD PFVAYDETDT PPTRLWPFML DYSQPFLRVF VWTALLSIIV AGVEIGLIYY
61 MGRVVDVLNG EPAEVWARYG TEFIVLALFV LLIRPALHVA DVLLLNNAIL PNFGTLIRWR
121 AHKHVLRQSV GWFENDFAGR IANRIMQTPP AAGEVIFQVF DAISFSLAYL LGAAILLMAA
181 DIRLLLPLLI WFALYALLVR WTIQRVGPAS QAASDARSTV TGRVVDSYTN IHSVKMFAHD
241 DRELTYAREA IEETRRTFQV EMRIFTIMDV VLVTLNGLLI VGVVGWAIAL WMQGQASVGL
301 VAAASALTLR LNAMTGWIMW ALTSFFRQLG VVAEGMETIA QPIDLVDAPD ARPLELSEGR
361 IELQQLSHHY GRGAGGLDQL DLTIAPGEKI GLIGRSGAGK STLVKLLLRF YDPDSGRILI
421 DGQDIARVTQ NSLRSHIGMV QQDSALLHRS VRDNLLYGRP DASEDEMIAA AKQAEAHDFI
481 LDLEDPQGRR GYDAHVGERG VKLSGGQRQR VTLARVILKN APILLLDEAT SALDSEVEAA
541 IQDTLYGMME GKTVIAIAHR LSTIAQMDRI LVLDQGRIVE EGDHADLLAQ GGLYAQFWAR
601 QSGGFLNTEA AE
SEQDB ID: 3101377AEA
Reference:
3101377
Name: sugar ABC transporter, Subunit: periplasmic sugar-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQSISGIAD NREEKMRRYL LSAAAVCAVV AGQAAYADEA AAKKWIDEEF QPSVLSKDEQ
61 MAEMQWFIKA AEPYAGMEIN VLSEGIPTHS YESEVLTKAF EEITGIKVNH QILGEGEVVQ
121 AVQTQMQTKR NLYDAYVNDS DLIGTHSRLQ LAYNLTDMMA GDFKDVTNPG LDLGDFMGTQ
181 FTTGPDGDLY QLPDQQFANL YWFRKDWFDR EDLKAAFKAK YGYELGVPVN WSAYEDIAEF
241 FSEDVKEIDG TAIYGHMDYG KRAPDLGWRM TDAWLSMAGA GSKGEPNGIP IDEWGIRMEA
301 GSCNPAGASV TRGGAANGPA AVYAIRKWDE WLRKYAPPGA ASYDFYQSLP ALAQGNVAQQ
361 IFWYTAFTAD MVKPQSEGNN TVDGDGNPLW RMAPSPHGPY WEDGQKVGYQ DVGSWTILNS
421 TPLDRAQAAW LYAQFVVSKT VDVKKSHVGL TFIRDSSVNH ESFSERAAKL GGLVEFYRSP
481 DRVRWSPTGI NVPDYPKLAQ IWWQQIGDVN SGAFTPQEAM DRLAFEMDTV MARMQAADEA
541 ANVYGGCGPR LNEEKDAEWW FANGGAKPKL DNEKPQGETV NYDELVARWA KN
SEQDB ID: 3101377AEB
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALELRNVTK RVGADLHIKE TSLVLETGHF NVLLGATGAG KTSLIKMMAG LDPVASGQIL
61 MDGQDVTGQS TQKRNISLVH QFFINYPHMT VFDNIASPLK VAGLAKSEIQ GRVEHAADIL
121 KLRPMLHRRP HELSGGQQQR TALARAIAKE SRAVFLDEPL ANLDYKLREE LRDQLPDLFA
181 GRGAVVVYAT SEPEEALLLG GHTALMEDGR VTQFGRTAEI YRDPSNVLAA QVFSDPPINT
241 AQIAKQGDTA RMGPDVSWTL SGAAAGLADG PYVIAIRPHH VSPVASSEAT VTLSGRVQVT
301 ELSGSESSAH FDMGSGSWVS LAPGVHPYRV GEMHDFHMDP SAAYVFAPDG SRVA
SEQDB ID: 3101377AEC
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKITLSKLR HSYYPNPKTP DDYALKEIDL DWTDGGAYAL LGPSGCGKST LLNIISGLLV
61 PSEGRILFDG QDVTELPPDK RNIAQVFQFP VIYDTMTVYD NLAFPLRNRG RDEATVRERV
121 TAIAEMLELS DLLNRKAAHL SPDNKQKISM GRGLVRQDVN VVMFDEPLTV IDPHLKWKLR
181 SKLKELHQRV RATMIYVTHD QTEALTFADQ VVVMQEGEVV QIGTPVELFD RPAHTFVGHF
241 IGSPGMNILP AEVSGGVAHF AGQAIPLEGP ITAAPGARTE IGIRPEFVSL GLSGLPATVT
301 KVSDVGRHTV VECEVAGSRV NAIVTGSGPE KGAMVQLEFR RDQTRLYADG WLASEAAEGA
361 A
SEQDB ID: 3101377AED
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTEYQKAWF FVLPVLVLVA FNALIPMMTV VNYSVQETFG DNLFFWQGLG WFEQILRSDR
61 FHAALGRQFL FTFLILIIEV PLGIAIALSM PRKGFWVPVC LVLMALPMLI PWNVVGAMWN
121 IFTLPDIGLL GYFLNHVMGI NYDMTQDPLA AWITIVTMDV WHWTSLVVLL SYAGLVSIPD
181 AYYQAAKIDG ASNWAVFRYI QLPKMKTVLT IAILLRFMDS FNIYTEPFVM TGGGPGNSTT
241 LLSIDLVKIA LGQFDLGPAA AMSLIYFAIT LLVSWLFYTL MTKDDQN
SEQDB ID: 3101377AEE
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQKRTLVPIV YILFLMLPIY WLVAMSFKTT NEILAGFSLF PQTFTLENYR VIFTDPTWYW
61 GYINSILYVT LNTVISVAVS LPAAYAFSRY RFLGDKQLFF WLLTNRMAPA AVFALPFFQL
121 YSAVGLFDTH LAVALAHCLF NIPLAVWILE GFMRGIPKEL DETAFVDGYS FPRFFATIFV
181 PSIKAGVGVA AFFCFMFSWV EMLLAKTLTA VEAKPIAATM TKTASSAGYE LGLLAAAGTL
241 TIIPGAIVIW FVRNYIAKGF AMGRV
SEQDB ID: 3101377AEF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSWMAWTWP TALLFIGIFS AIGVLVVLEI RHPGGDARKG VLGLTTTRGD RLFISLLGSS
61 YIFLAWLGLV GLPLWVPLGL ALAWGSFCFW KV
SEQDB ID: 3101377AEG
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARKQERSLL TEVELEFMTV VWEIGSGTVR DILAELNKAQ TRAYTSVATV LKIMEQKGFL
61 TSERHDRSLV YRSAVPKEDY QRTTLKDLSS KLFDGAPAAL VARLVDDEEV TDDMLESMRA
121 LLNERLGDNG R
SEQDB ID: 3101377AEH
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGEVLLNAY LDLNLLLVAG VAIWSLLRWA VAKTRLGTAY MPQLRLLNGL TVLLVASPLL
61 AMAITTWIVA HPPNIPDLLV RQYLHGNVGL SASQFEALLG LREDMVRALL AQHEVWAQVV
121 AAAFLAGALF CTLHMGLSVL RLSNSLRGAH LWKRIGRVHL LVSDTARVAY STRGLRNRYV
181 VLPSALLEAP QDLRMTVAHE LQHFRQSDIE CEFLLELLRP LLFWNPAFFL WRRQVRMLRE
241 YACDQALMAR PHFDMRAYCE CLFRACRVAA QNRVLFARTT PTVALVDRRE TRRPSTLHSR
301 IEALTATRQD TAGPTAWLLI SGLLVASVLS TMLVMQRSSD WSHDRIMLST IVNLERMAQR
361 NATVASPFQG GFVVATD
SEQDB ID: 3101377AEJ
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAVLYRAFG AARDVLTLEE FPAPRPGPGE VLVDLAFSGV NPSDVKARAG ARAGVTELPY
61 PAIVPHSDGS GVIRAVGEGV DVARVGERVW LWNGQWGRAM GTCAEQIALP AEQAVPLPQD
121 VSLETGAVLG IPGLTAAHVV FSGGPVSGKT LLVQGGAGTV GFLAVQLAKW GGARVIATAS
181 AGAAERVRAA GADAVLDYAA PDLAAAVLAA NDGAPVDRIV EVEFGANAEV DAAVIAPNGR
241 INAYGSARQM APVLPFYPLM FKSVTLEMTL VYLLDTANRQ AAIGHLHSAL SAGALSCPVQ
301 EIYALDAAAA AHEAVERGAR SGAILVRTSG
SEQDB ID: 3101377AEK
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDLVVGIDL LLRGGAVTAL AVCALIFLAN RALWPRGLSV PALCLGLGAY LLVSSPNLGL
61 SGTWAETGLV MLAGAVPVLA VWAGAEIFLD RPVYRPWHGM LAVLVTAGAW LAPILPFAAT
121 LRGILVVLLY AGLLYIALST AAVDLVESRR RFRRWFVALM ALTGLGISVV EFLKLDADLP
181 PVMYPLHASG FLVLTLLFLS WAVRIAPDLW PLRREPEPEP ARPLSGADAA VLQRVEAAMA
241 DGIWRQEGLT IAQLAAAVDA PEHRVRRAIN KGLGYRNFAQ FVNEHRIEAA CEILSDPARA
301 DTPVLSIAYD VGFASLGPFN RAFREKHRQS PTQYRNRHCQ VVGGYVLD
SEQDB ID: 3101377AEL
Reference:
3101377
Name: sterol desaturase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDQCIISHL AGIFSGVLAT DFLRYAVGAG GVYLTVNLAL AARLRARKIR AYEPPKGQIG
61 REILASLRTV LIFALNGTLI VVGAEAGLVP IYREIATHGW AYLFFSTTVL IVAHDTWFYW
121 SHRLLHYPPI FRRFHRLHHK SHNPTPFTSY SFDLGEAVVN AIYLPLILLV LPAHPVAILV
181 FVTHMMLRNA IGHSGYEIFP ANRRGKPLFD WITTVTHHDL HHAHAGYNLG LYFTWWDRLM
241 GTEHPDYHEA FQKVAKPASW PSVRAVILAF AIFTGIAVSD ARAERLSGAY ASPGFGVIVR
301 FEPCNANPGL TCGRMIWAWD AAEVPHAQSG DVIVIDLHGD GNVWSGRLKN PENGRMYRGS
361 VVQRSPDTIV LRGCAGPFCT SQIWHSVRAL RRALESAE
SEQDB ID: 3101377AEM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKPEFIARQ GRKPTGWLGH IVARVMARET RPENDRALSF LDLADGDSLI DIGCGHGETL
61 FQADRIVRLS GSVGVDFSEV MLKRARARNR DAVWDTRMAF HCADTAALPF PDKRFGKALS
121 VHTIYFWPNP AAHLAEAFRV LRRGGRFLFC YRSTADRRAV EEFPDTVYRF PSVQEVEEKL
181 KLVGFLGPET TTEDIKGRLT HWSIAEKP
SEQDB ID: 3101377AEN
Reference:
3101377
Name: ankyrin repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKSLDQLRR DAKALGKAVA DGDKGARLRV QGILTDPKQG SYKHADFLHV IARETGFATW
61 PALKLAVETE GMDRAQKQGR LRWALYNGSP MTVNHLLRED PSLPEGQVPL LVALYDVEGM
121 REILARDPDA ATRDYPPRRP MCHLAFSKHI KSQPEKQADM LAMADLLLAH GANVNDSFPS
181 APDTDHRLSA LYGAIGHADN PALARWLLEH GADPNDNESL YHSTECGHVE SLRLLLTHGA
241 NPMGTNALPR AIDFDNTEMV RLLLEHGANP NEGSSPHPSG EPTLVIPALH QAARRLASAE
301 IAQLLLQHGA DPSARNRGHT PYAFARVFGN TAVAEVLEQA GARTDLTVPE EILVRAADGT
361 NSTHDRIDMQ QIPEEMKYLL CRLVWREGTL AHMQRLVAMG FDPNSPDEMG MPPLHLAGWE
421 GMTEVMAYFL EQSPDLDHIN EYGGTLLSTI VHGSENCPQR HRRDHIECAR MALERGVELP
481 QKAATYATVP EMSAFLADWA ESHPSQVVVH GVV
SEQDB ID: 3101377AEP
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo1
Sequence:
1 MKSKSPEEIA VIGVDIGKET FHLVGFDHAG ERVLRKNIKR LAIKPTFEKL PRCVVGMEAC
61 ISAHFVSRML RELGFEPRII PAIYVKPFNK GQKNDYNDAE AIAEAAMRPN PRTVTEKSQD
121 QLDLQAMHRV RSRLVARRTA TINQIRAFLI EQGITVRAGR HRLQSSFAAI LENRRDEISS
181 RMRAILMGLY GDWLWVDERI KAISSEIEEI SRSEENSANI MTIPGIGPLI STAIVSAIGK
241 GEVFDRGRDF AAWVGLVPRQ FSTGGRTILG RISKRGNSYL RMLLVQAANV ILMRPHRWDA
301 LGLGPWLRGV VGRMPHNKAA VALANKLART AWSVLRYGSK YQVERDEALA AI
SEQDB ID: 3101377AEQ
Reference:
3101377
Name: cytochrome c oxidase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQSIFFLFC LILAPLVAHL RQWSPTALFA VATLVYAAFG GANFVSTQIV LSNIRETEPA
61 YRDTYYVVNR GYVSLNLGLA MAVFAVLTWL QTRFGAMLYP KITKALFWLL HLGLIGGSAF
121 STMLVFLLPK PRRFIDYPEF METFILVGSW ATLISSIAVL GLLGLLVWSS ALTWLASRNS
181 GH
SEQDB ID: 3101377AER
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKYGRPYHL PTSPGVMSDD KILRDLSVLT AATEVVFTEK MDGENTTIYQ GGCHARSPDS
61 GYHASRDWMK AFAAVISPSL AENERIVGEY LFARHSVAYD NLNSYFLGFA WIVDGTVKTW
121 DSTVERFNIL GIQPVSVLHR GSFSDAAVNA VLADLDLSKQ EGFVVRTTSE FSETNMGTCM
181 AKYVRADHVQ SETHWMNAEI TRNGLKKA
SEQDB ID: 3101377AET
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLWVSDFTYV ATWKGFVYVA FVIDAHARKI VGWRVSTSAQ TGFVLDALEQ AVHDRKPTKA
61 MGLVHHNDRG SQYLSIRYTE RLADAGIEPS VGSVGDCYDN ALAETSMASS RLRLSIAAAL
121 GAASRQWNTR LWNGSAGSTT AAFPSPSGTS RQPKLRQTST RLGKLKTWPR N
SEQDB ID: 3101377AEU
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo3
Sequence:
1 MEKNKSSSPD FSVRDFFKRF PDDEACLEHI FNVRFGARHV CRACGVESTF HRMSDRRAFA
61 CAACGDHVYP TAGTIFQDTR TPLQVWFYAI YLFVTTRHGV SGKELQRQLG VTYKTAWRIG
121 HKIREQMDKH DLKAMLQGHV EIDEAYIGGK RPGKRGRGAA GKTIVMGFKQ RGGRLVTEIV
181 PDVKLKTLRA ETLKTVDAGA TVSTDELYSY SLLKGEGYTH VAVKHGAKQW TIYDAETDTM
241 HHTNHVESFW RHFKHSIRGT HVSISQRHMR KYLDEFTFRA NHRGEVNLMF DRLVAAF
SEQDB ID: 3101377AEV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSFNSFMRP LAAAILSALV TLAPVAPQAQ EAVRGAVTNL PIPRFVSMKA NEGNVRRGPS
61 LTHRIDWVFK RRDMPLQITA EHGHWRKVQD RDGAGGWVHY ALLSGVRTVL VEKDMMPLYA
121 RPDPASQVAA HFEMGVVARL GTCTQDWCRI SAGGYRGWAP KENLWGVGTD EIRE
SEQDB ID: 3101377AEW
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRERLSVVV TRRLPEVVET RLSELFNVRL RDDDTPMSRD ELAAALREAD VLVPTLNDRI
61 DAGLLAQAGE RMRLIANYGA GVDHIDVATA RQRGILVSNT PGVLTDDTAD MTMALILAVT
121 RRIPEGLAVM QKNEWTGWAP TALLGGRVGG RRLGILGMGR IGQAVARRAS AFGMQIHYHN
181 RRRLRPEVED ALEATWWDSL DQMIARMDVI SVNCPSTPST FHLMNARRLK LMKPTGVIVN
241 TSRGEVIDEN ALTRMIRTGE IAGAGLDVYE HGTQVNPRLR ELPNVVLLPH MGSATLEGRI
301 EMGEKVIINI KTFADGHRPP DQVVPAML
SEQDB ID: 3101377AEX
Reference:
3101377
Name: gamma-Glu transpeptidase, Class: EC2.3.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ggt
Sequence:
1 MRIRWQESLC LLWVGAATPL FAQQAADAVA PEGAATGQVR PFSAVVEAGQ AAKEAGQPVE
61 AENWMVAAAN PLAVMAGGNV LRQGGTAADA MVAVQTVLGL VEPQSSGLGG GAFLVWYDGN
121 TGQMTTLDAR ETAPREATPR LFQDADGQPL KFFDAVVGGL SVGTPGTPAL LEEAHRRWGQ
181 ANWGSLFGDA IWLAENGFTV SPRLAGLVEG DAEKLGRFPE TAAYFLPGGA AIKAGDTLKN
241 PAYAATLRAL AAEGSAAFYG GPIAADIVRT VRNAEGNPGV LSGADLALYQ VIEREPVCAS
301 YRAFEVCGMG PPSSGALTLG QILGLLEPYD LAALGAENPE SWRLIGDASR LAFADRGRYM
361 ADSDFVPMPT KGLVDPDYLK TRSELLAGPN ALESVAPGNP EFDHASNWAD DISLELPSTS
421 HISIVDRYGN VLSMTTTIEN GFGSRLMTNG FLLNNELTDF SFKTHDNGVP IANRLEPGKR
481 PRSSMAPTIV MQDGKPVLAI GSPGGSRIIG YVAQSIIAWA DWSMNVQQAL NAPHLVNRFG
541 TYDLEEGTDA AGMEEALTGL GYKVSVRALT SGLHAIEIGD TLKGAADTRR EGIALGE
SEQDB ID: 3101377AEY
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQITALPRN ETGIETVIGI LRQRFGDRLQ TGQAIREQHG HTTTWIQNQP PDAVVFPTST
61 AEVSEIVKTC AEHKVAVIPF GTGTSLEGHV NAPAGGISVD LMQMNNILAV HAGDLDCVVQ
121 PGVTREQLNT HLRDQGLFFP IDPGANASLG GMASTRASGT NAVRYGTMKD NVLALEVVMP
181 DGEVIRTAQR AKKTSAGYDL TRLMIGAEGT LGIITEITLK LQGIPEAISA ARCSFPTVDA
241 ACQAVMTTIQ FGIPVARMEL LDVIAVQAVN AYSKLDLPET PLLLLEFHGS EAGVAEQAEL
301 FGSIAEENEG SGFAWTTSTE ERNRLWKARH EFYWASLQLR PGCSALATDV CVPISRLAEC
361 VNAATAKAEE LGLFAPLVGH VGDGNFHISP LIDKDDPAEV ATTEAFTAWL AELAISMDGT
421 CTGEHGIGQG KRAYLSRELG QTPRYMAAIK AALDPLGIMN PGKIL
SEQDB ID: 3101377AF
Reference:
3101377
Name: ABC transporter, Subunit: transmembrane ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFADLIDPF RDTDTPPPQR LGAFIRWALS GAWPVLFVAA LFSALAGMFE AITAWILGQV
61 VDRAVELGPE GFFEGTNLAT ILVAVGFFVL IRPVAFGLSA FSNNYIVMPN IPPLVLAKLN
121 RWTLGQSVGF FDDDFAGRIA QKQMQTASAL SSVVSETISA IVFALASLIG SLALLGSIHP
181 LVMLPFAVWL CGYFLLIRWY LPRVRKRSAA RAGARAMVSG QVVDTITNIK TVKLFAHAEA
241 EDVTARNAMA DLRERSLDFG WLSASFRFFL MLLAGVLPVI LLGSALILWR AGDASAGDVV
301 VAGSVSIRIA QMSGWVSFTL MSLYANLGEV QNGMNSLARA ERIEDVADAR PLVAGAGKID
361 FEDVGFAYGR KSGGVDALSL TVAPGEKLGI VGASGAGKST LVSLLLRLYE AENGQIRIDG
421 QDITTVTQDS LRRQIGLVTQ ETAMFNRSAR ENILYGRPNA SEAELIAAAQ KAEAHDFILD
481 LADAKGRTGY DAHLGERGVK LSGGQRQRIA LARAILKDAP ILVLDEATSA LDSEVEASIQ
541 TALHRVMEGK TVLAIAHRLS TLSEMDRIVV LDRGRIVESG THEALLARDG LYARFWHRQS
601 GGFIRTQAAE
SEQDB ID: 3101377AFA
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTQVKALVV GGGAVGTSIA YHLAKAGWND VMLIERDELT SGSTWHAAGL LPLFNMSYAT
61 THIHQYSVDF YKTLEEETGL NAGFAVVGNL RMAQTQDRMD EYMLYASTAE TCGVKYEWLT
121 PDQIKERWPL IETSDLKGAI YHTEDGYINP ADVTQAMAKG ARQRGVDIVR KMQADAFHWN
181 GTHWEVTCTK MVEKGGNLVP SDEQVVITAE HVVTASGNHA QRTAKLLGIK MPAIPVEHTF
241 IVMDQDPELV KWREAGNPEH PVVRDADNES YAREERGGWI LGIYEHGAPA RFEYGVPDSF
301 RADLFPLDLD RIADQYMAMA ERVPSCAESG LKDDFNGPIC YTPDGNPLVG PAPGLRNMWL
361 AEGFSFGITA AGGTGYYLAQ MMVDGEAEID MASLDPKRYS SNWMTTEFAA RKNEECYSHV
421 YILHHPDEER EACRPLRTAP AYDRQKALGA QFGFVNGWER PNYYGPLDAP ENFDHDARSF
481 RRGGWWQYAV EEAKAIRNGV GLIDATAFTK HVVKGPGATQ FLDWFTCNKL PKVGRINLTY
541 ALTSAGTTRT EYTIVRNGEN NYYIVSAGAW TEYDADFLRK AAEDKMEEFG YIEIQDVTTQ
601 WGVFAIAGPK SRDVLKEVIK DADPETALSN KRFPWLSARQ IELGMCPVNA IRVAYTGELG
661 WELHHPIEMQ RYLWDLLLAA GEKHGMKLVG ARAQNWLRQE KSYRAFGTEL GRDATPLEAD
721 LPRFVDLGKD FHGKAEMEAK GIRSKCCTLL IDGPSDADPW GREALYTPEG ARVGRLTSGG
781 YSVAFEKSIG MGYVKPELAV EGTKLKVKML DQLWDAVVTC DSPYDPKNET IRKDG
SEQDB ID: 3101377AFB
Reference:
3101377
Name: EF hand domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRIRRAGAP PAAKWPDGSG RIARLTCECR QTGVTLMRLL LLASACALGT AALAQGAPGA
61 HFIENWDMDG DALISAAEIV EKRGEIFVMF DQNEDGALDT AEYDLFDETR RADIEANAGG
121 RKGPMALVDQ AMDRAFNDAD GDGLVSAEEF TAKSAAFFDM LDKNGDGVIS SADFKPGG
SEQDB ID: 3101377AFC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPEHMIGSA LMKTAILLAA MALASILQQL ALRGAAPL
SEQDB ID: 3101377AFD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEQATRKARM LDKSQKPTWT SFEEATQADW DAVMEYEEAY NAALPERILD AIRSLDEAWT
61 PYPINRFQHC LQAATRAHAD GAEDEIVVAA LVHDVGDILS PYNHGELAAA MMKPYVSEKC
121 HWILQHHCVF QGYYYNHYWG GDRNARDKYR DSPYWEDARY FCHEYDQCAF DPDYPTKPLE
181 FFEPILRRVL SRGGGHMELN ETAEG
SEQDB ID: 3101377AFE
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQISALETFL AIASSGSFHA AARHLNVTQT TVSARIKALE SALGAQLFER GRGGTRLSAA
61 GLRLMPHAEQ MLRSWDFVSA EIASDPGARG ALRLGAQLSL WDALLADTAI WLERERGVLP
121 FTLNYDHMLD MGDAVAGRLL DLALVHERPS QPGVEVVDLA DERLTLVADR PLRLGPDEMP
181 LFINLAFCAE YDRQWQQVMP PGSRQHIVLG NTAMGLRYLM RRGGVGYFPD AMIAGPLARG
241 RLHAVAGAPT MRLACRAIYL RDNPGWAQIE AALEGVRALR DSARA
SEQDB ID: 3101377AFF
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase, Isotype: AhpD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWNDKLAAT RAGLRNLHGA IPDTARAFGA LGKTVKEGGT LDFKTKEFVA LGISIASRCE
61 PCISLHVEAL VKAGASRAEL SDVLAMSIQM GGGPSMMYAA KALECFDDLT G
SEQDB ID: 3101377AFG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRTPPSVAS IATQGDGARM VAPAAERNMA ALCDLLAQVA RHQGRALELA SGTGQHVSAF
61 AARLPGLQWQ PTEVDAQRRA SIDAYCEALD TVAPAQELNA TRPGWGADWA GQDLVVLINL
121 LHLISEGEAA TLISEAAAAL APGGRLVIYG PFMRAGELTS EGDERFHAAL TAQDPEIGYK
181 DDFDIIDRMQ EAGLELAEVV EMPANNLALI AEKPRI
SEQDB ID: 3101377AFH
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDFLVIGGG IAGLSAGARL SAHGKVTVLE AEEALGYHAS GRSAALFEQA YGKPAVVALN
61 RASAAYHHTA NGGYLTPRGL MLVGAADQAE AFQADIVDME MTPVSLDEAR AMVPILNPET
121 VVYTAYHAEA WDIDTDRLMQ DFARVIRANG GAVLTRQRVS RIAHGAVWQV EAGEVFEARN
181 IVNAAGAWAD QVAVMAGVAP IGLQPYRRSM ARIPAPGGHD LSGWPMLMGA GESWYAKPDA
241 GKLIISPADA DPVEPQDAWA DDMVLAEGLA RYQEMVTEEV TRMDSNWAGL RSFAPDRVLV
301 LGPDPDQRDF IWCAGQGGYG FQTSPAASQL LCDLVTGAAP EIEARMVAQL RPERLR
SEQDB ID: 3101377AFJ
Reference:
3101377
Name: oxidoreductase, Isotype: aldo/keto reductase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTATLTTPDG RPASAFAFGT MQFGGRADAA ASAAMYAACR AAGISHFDTA YVYTDGRSET
61 LLGGMIGAER DRLLIATKVG YLGGAGAANI RAQFDICRQR LGLDMIDALY LHRFDPDTDL
121 NETMECLARL RDAGQIRYVG LSNFAAWQVM KAVAVAGLFD LRIDLLQPMY NLVKRQVEVE
181 ILPMCADQGI AVAAYSPLGG GLLTGKYVGG GAGRLTEDDR YGARYGLDWM PRAAEGLVRI
241 GAELGVDPAT LAVAWVAASP LGAQPIISAR SAEQLRPSLA AMNYEMPPEL YARLTALSPT
301 PPPATDRIEE QA
SEQDB ID: 3101377AFK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNHKPFRERD LSTSNIHPMA SEHLPRYIVA ADGSDYLFTV MAVFTVGLIL LIGVGYFTLH
61 ALPERMAHKN NHSQFQLVGI LALLALFTHN NVFWVAAVLV AGFQIPDLAA PLRAISDAIR
121 GLGKTEDQGN ATPSERAPEP TPHPAAATEG H
SEQDB ID: 3101377AFL
Reference:
3101377
Name: multidrug resistance efflux pump
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLETILCALV TLLPDYLFRR YVQGKRIGHE LTLFSVWYEL RWGLTSCAML TLMVITTLFY
61 FHPATNAVTS YFRTVTILPQ VGGRVEEVYV ENNQPIEAGQ PILRLESLSQ QAGVEAAHAG
121 IAQIEASRKL ALTDLAMADA GIAQARAALT QAQEDLARNQ TLKDQGSSAV RLTEIERLDN
181 LVSEREALLQ AAEAGKAAAQ QQIEVLIPAQ MASAQAQLEL AKAELGKTLV VAGVDGRIEQ
241 FGLQVGDYVS PLLRPAGILV PSHSGRGRFQ AGFNQMAAQV IKPGMIGEIG CMTKPFTIVP
301 MVVVAVQDVI PSGQIHPTDV LRDPARNLMP GSVTVYMEPL YEGGADLLPP GSACLANVYT
361 NNHYRLAHDT DMGGFERVFL HVVDTIGVVH AAGLRLRVLL MPVQSLVFSG GH
SEQDB ID: 3101377AFM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPMSSPDRT CPSARCAPGN QLLGVKGPDG HVRHLRSSMT IDADFVETAS AHGKPEARMR
61 FSSPCATSGC AQWTGSRCGV IDHVLSHLEQ AQVPLADHLP PCPIRASCRW FDQTGEIACR
121 ACSMVITDQS AIAAE
SEQDB ID: 3101377AFN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRADVFCPCP ARIFRGGIFI KETDMARFVV DTGDLEMDKS TEMELQGDIQ KLVLGHIART
61 GFEKPWVTKF PREWYGIILH PDLGPLLERE KQLGGMLARL G
SEQDB ID: 3101377AFP
Reference:
3101377
Name: bmp family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFTSLLASA AMALGLATGA MADDKTKVGF VYVGPVGDGG WTYEHDKGRQ AVEAEFGDKV
61 ETVFVESVPE GPDAERVMTQ MALEGADLIF TTSFGYMDPT INVAKKFPKV KFEHATGYKQ
121 AENVSVYSAR FYEGRAVQGT IAGRMTKSNI VGYIGSYPIP EVIRGINSAF IHARKVNPDV
181 QFKIVWAYTW FDPAKEADAA KVLIEQGADV ILQHTDSTAP QAAAQAAGNV ITFGQASDMS
241 EYAPMPRVSS IIDNWAPYYI ARTKAVMDGT WTSVSTWDGI GAGMVGIGEI SDAVPADVKA
301 EALALKDALA NGSYHAFTGP LKKQDGSDWL AAGETADDGT LAGMNFYVEG IEGDIPN
SEQDB ID: 3101377AFQ
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLSAINPVL LVASLMVAAT PLLLAAIGEL VVEKAGVLNL GVEGMMITGA ICGFAISVET
61 GSPWLGFIAA AIGGAILSLL FVLMTQVALA NQVASGLALT LFGLGLSALM GQSYVGIKPP
121 AMGRLDLPVL SDLPVVGPIL FSHDPILYLG ILLTAGVWWV LKYSRAGLIL RAVGENHDAA
181 HALGYKVIRI RILAIMFGGA CAGLGGAYIS LIRVPQWTEG MTAGVGWIAL ALVVFASWKP
241 WRALLGAYLF GGVTVVQLNL QAAGVAIPVE YLAMSPYLIT ILVLVILSAD KSGAPAALGR
301 SFHASH
SEQDB ID: 3101377AFR
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVLEKRPQP SRAWSLATPL VAVLATMFFG GLLFAALGKN PVEAIGTIFW EPLFGEYSFY
61 YRPQLLVKGA PLVLIAIGLS LGFRAGIWNI GAEGQYIMGA IVGAGVGLAF YPMEAFYVFP
121 LMVIAGALGG WAWAMVPAFL KVRFGTNEIL VSLMMVYVAE QLLASMSLGL LKNPEGFGFP
181 GSRNLQSYAS AHNAELIEGS GMHWGVVAAL IAVIFAYVLL NRHMTGFHIR LTGEAPRAAR
241 FAGVKPARLI LFCLGVSGAL AGLAGMFEVS GPSGQVSIDF NVGYGFTAII VAFLGRLHPV
301 GILLAGGLMA LTYIGGEIAQ GSLGLPAAAI QVFQGMLLFF LLALDLLTNY RIRAARKEVA
SEQDB ID: 3101377AFT
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTPLLSIKG LTKAYPGVVA NDNVSFDIGE GEVHALLGEN GAGKSTLVKM IYGLVKPDSG
61 TMSLRGAPYA PPEPRAARAD GIAMVFQHFS LFDALNVAEN IALGMENPPA MGDLAARIRE
121 VSETYGLPLD PFRTVGDLSA GERQRVEIIR CLLQDPKLLI MDEPTSVLTP QEVEILFQTL
181 QKLRSEGTSI LYISHKLEEI RTLCDHATIL RLGKNVGECT PAETSARDMA EMMVGTALKT
241 PERSGREFGE IALDISGLSV PSPSEFGTSL KNVHMTVRKG EVLGIGGVAG NGQDELLAVL
301 SGEILTAADA VKKDGQPVGR LGPVARRRLG LLTAPEERLG HAAAPNMSLT ENALLTGSVR
361 EGLESNGFLK WAETREFAER IIKEFDVRTP GPENAARSLS GGNLQKFVIG REVLQNPDVL
421 VVNQPTWGVD ASAAAAIRQA LLDLAAKGAA VVCISQDLDE LMEISDTFAA LNEGRLSAPR
481 DTTGLTVDEI GLMMGGAHGM EVAHV
SEQDB ID: 3101377AFU
Reference:
3101377
Name: xanthine dehydrogenase accessory factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xdhC
Sequence:
1 MAFDLEGLRA AVAAHGRVTR VVIAAIRGSS PREVGAAMLV WENGQSGTIG GGALEFQAAE
61 AARAGRLGLS RHALGPELGQ CCGGAVTLLT ESWDAARLDT VEGTVVARPA LPFSGTENGP
121 ETLQVSGAPL ALRRLLAQAR GQGVLPKAQL VGDWMVEPVL RPARQLWIWG AGHVGRALVD
181 VLSPLPEIAI TWVDTGVERF PETIPAGVTP LPAAQPADLV GYAPKEAEHL ILTYSHELDL
241 ELCNRLLRHD FAFAGLIGSA TKWARFRSRL AALGHGPQQI ARITCPIGDP ALGKHPASIA
301 IGVAARLLSP AHSETTRKEL SA
SEQDB ID: 3101377AFV
Reference:
3101377
Name: xanthine dehydrogenase, Subunit: B, Class: EC1.1.1.204
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xdhB
Sequence:
1 MSVAKPLPHD AAPLHVAGTA RYVDDIPTPR DTLHLAFGLS TIAKGRITAM DLDAVRKAPG
61 VVRVMVADDL PFANDVSPSA HDEPLLSDGT VHYVGQPLFV VVATSHLAAR KAVRRARIDY
121 AEEPAILTIE QALAANSRFE DGPRIYEKGD AEAAISGAAH VIEGTFELGG QEHFYLEGQA
181 ALALPGEGGD MLVHSSTQHP TEIQHKVAEA LGVPMHAVRV ETRRMGGGFG GKESQGNALA
241 VACAVAARAT GRACKMRYDR DDDMVITGKR HAFRIAYRAG FDAEGRIQGV SFLHHAICGW
301 AQDLSLPVAD RAMLHADNAY LLPNARIESH RLKTNTQSAT AYRGFGGPQG MVGIERVMDH
361 AAHVLGIDPV ELRQRNYYAA PVGGAAPHIP RSISNQKEAN TTPYGQVVED FELHGMTEAL
421 LTSSDYAARK AAVAAWNAAN PIVKRGIAFS PVKFGISFTL THLNQAGALV HVYQDGSVHL
481 NHGGTEMGQG LFQKVAQVAA SRFGIPLEMV KITATDTAKV PNTSATAASS GSDLNGMAVK
541 AACDTIRDRM AAYLAERHQA EVASVRFGNG HVEVGEARYS FAEAAALAYQ GRISLSATGF
601 YKTPKIEWDR IQGRGRPFYY FAYGASVTEV AVDTLTGEYR ILRADILHDA GASLNPDLDI
661 GQVEGGYVQG AGWLTTEELV WDDHGRLRTH APSTYKIPAC SDRPEVFNVA LWDGQNREDT
721 IYRSKAVGEP PFMLGISAWL ALSDAVASCG DAYPALNAPA TAEEVWKGIR RLGDGV
SEQDB ID: 3101377AFW
Reference:
3101377
Name: xanthine dehydrogenase, Subunit: A, Class: EC1.1.1.204
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xdhA
Sequence:
1 MDISFLLNGE TVTLAGVDPT ATLLDWLREA RGLTGTKEGC NEGDCGACTV MISDAESSRA
61 LNACILFLPQ LDGKAVRTVE GLGGTHPVQQ AMVTHHGSQC GFCTPGFVMS MAASHAEGAT
121 DHDTQLAGNL CRCTGYAPII RAARAVEDAP KPDWLATDRA FISPEILRGE AAGRGAEPPA
181 APTSSNELAA LYDAHPDATL VAGATDVGLW VTKQLRELPK VIFLSGCADL KDIEITDTHV
241 RLGAMVDMNR MRDALAPLHP SYGEMIRRYA SVQVRNAATV GGNIANGSPI GDNPPALIAL
301 GATLHLRKGD TRRDLPLEAF FLDYGKQDRA PGEFVEAVSF PRQPDRLKCY KLSKRFDQDI
361 SAVCGCFNIT VEGGTVTAAR IAFGGMAGIP KRASAVEAAL IGQPWTQQVV NAALPEFERD
421 FTPMSDMRAS ARYRMETAKA MLSRYFAEDQ GHLANVLEVR A
SEQDB ID: 3101377AFX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLFLTFALV GFFAQLADSA LGMGFGVISA SVLLAQGVPP PLVSASVNAA KVPTGIVAGL
61 SHALNGNIDK ALFMRLALSG AAGGLVGALI LGELKRPVLT VIIASYLLLI GGLILWRGLS
121 GRAPRLLATG RISVLGATGG LIEGIGGSWG PVVTSGLIGS GHEPRRAIGS SALAELAVSL
181 TVFLALMAGY HLGRWGTGRD LHEVLLPVAG LVAGGVPAAL VGGRLAAVLP RRPLTVAVGL
241 LAIAIGLQRL ASLL
SEQDB ID: 3101377AFY
Reference:
3101377
Name: DNA polymerase III, Subunit: alpha, Class: EC2.7.7.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaE
Sequence:
1 MSSNPRFIHL RLHTEYSLLE GAVRLKKLPA LCDKMGMPAV AVTDTNNLFA ALEFSVGASG
61 AGIQPIIGCQ LDLAYVAAMP GERPKPPAPL VLLAQNEAGY ENLMKLNSCL YVDKGGQLPQ
121 VTLEELEALG DGLICLSGGP DGPVGRLLQA GQRPAAEALV DRLAAIFADR FYIELQRHPG
181 EGGAPEAERL TERGHVEMAY AKGLPLVATN DVYFPEAGMY EAHDALICIA DGAYVDQAEG
241 RRRLTAQHYL KSPQEMATLF ADLPEAIENT VEIARRCAFM AYRRDPILPK FADDEVVELR
301 RQANEGLQAR LAVIPHAVSA EDYQKRLDFE LDIIEGMGFP GYFLIVADFI KWAKDHDIPV
361 GPGRGSGAGS LVAYALTITD LDPLRYSLLF ERFLNPERVS MPDFDIDFCM DRREEVIRYV
421 QEKYGRDKVG QIITFGALLS KAAVRDIGRV LQMPYGQVDR LSKMIPVEGV KPVSIEKALK
481 DEPRLREEAR NEEVVDRLLT YGQQVEGLLR NASTHAAGVV IGDRPLDALV PLYQDPRSDM
541 PATQFNMKWV EQAGLVKFDF LGLKTLTVIQ NAMDLIFKSG RPLHVAADGR QLYDPAEGAE
601 NQINAIPLDD VPTYKLYSAA KTVAVFQVES SGMMDALKRM KPTCIEDIVA LVALYRPGPM
661 ENIPVYCEVK NGLREITSVH PLIDHILEET QGIIVYQEQV MQIAQVMAGY SLGGADLLRR
721 AMGKKIKEAM DAERPKFETG AAENGVDAKK ASEVFDLLEK FANYGFNKSH AAAYAVVSYQ
781 TAWLKANHPV EFMAGVMNCD IHLTDKLAVY FEEVRKGLGL PYVPPCVNRS QATFDVVGGE
841 LVYALGALKN VGVEAMRLVV EGRQGAHPPE PASSRDAARR PDRAEERPFV TLFDFARRVD
901 LKKVGKRPLE MMARAGAFDQ LDPNRRRVFD SIEALMAYSG AIFEQKSSNQ VSLFGEAGDD
961 LPEPRLAQAP DWLPAERLSE EFKAIGFYLS GHPLDDYMPA LKRKGVLTLD EVTEQARSGP
1021 VLAKMAGVVA GRQERKSARG NRFAFAQMSD PTGAFEVTLF SEVLEKSREF LETGSHVVLT
1081 AEATMEADQL KLLARSVGPA DAVVAEAGAT GLRVFMDNAG AVETVAHILA EAAQAARNAA
1141 RGPVQLCLMD PGLPGEVEMD LGQEFPLNPQ IKGALKSLDG VVDVEEM
SEQDB ID: 3101377AG
Reference:
3101377
Name: 23S rRNA (uracil-5-)-methyltransferase, Isotype: rumA, Class: EC2.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rumA
Sequence:
1 MPLYQAAMTQ EITITRLGHQ GDGIAPGPVY VPRSLPGEVV SGTPEGDRLA DMRVVTPSPH
61 RVAPPCRHYR ACGGCQLQHA SDGFVAEWKQ EVVRAALAAQ GIEAVMRPVH TSPPQSRRRA
121 TIAVRRTKKG ALAGFHGRAS DVITEIPDCH LLDPALLAAI PMAEALAMLG GSRKGVMAVT
181 LTLSVAGLDV AVRGGKPLDG PLEVALGQLA EVQGLARLAW EDEVIAMRHP PAQNFGKAAV
241 VPPPGAFLQA TRDGEQALLA AVRETIAGAR RVADLFAGCG TFALPLAETA EVHAVEGESA
301 MTAALDRGWR RAQGLKRVTT EARDLFRRPL LPDELAAFDA VVLDPPRAGA EAQVAELARA
361 KPPVIAYVSC NPVTFARDAK TLVQAGYSLN WVQVVDQFRW SAHVELAAAF SLAHIGG
SEQDB ID: 3101377AGA
Reference:
3101377
Name: CobW/P47K family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPLPVTVIG GYLGAGKTTL VNHLLRHAAG RRLAVLVNEF GDLPIDADLI EAEEDGMISI
61 AGGCICCSFG SDLIGALNDL AAMEPRPDHI LVESSGVAIP GAIVSTMLLA DGIRSDGIVV
121 VVDGETVRQR AQDDYVGDTI TRQLSDAEIV VVNKTDLLAH AVQTELMEWL AEAAPGAIAI
181 PAERGRVAPG ALLGVLPAPG TGQPAHHSDR LFDSLVLAPE GGQPIERLAR DLATGPHGVI
241 RAKGYLRDIE GALWLIQTVG RRWEVTPAQG PHQTGLVCIG FRDRLDRSGL AALAGATV
SEQDB ID: 3101377AGB
Reference:
3101377
Name: amidohydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAETIIYAAR KIITMAPSRP EVSHVAVRDG RILGIGTLEE LASWGDYRLD DRFAGKVLMP
61 GFVEGHAHTM EGTLWRNVYV GWFDRMDPEG RVWPGLKSID AVVARLREAE AQMSGPETPL
121 AAWALDPIYM ENRRVTRLEL DQVSTTRPIG ILHASGHIMN VNTRALELAG LMKPGVNHPG
181 IPLGEDGLPL GPLYGPDAMT PVGPHVGFDR AMTDCDERGL RDYGKLCVRA GVTTCTDLAA
241 RLTDDSVDMM LRVTGEEDYP ACIVPLRVFF GMSAEEIVDY CVSLKPRSTE RLRLGRIKAV
301 ADGSIQGFSA RLRWPGYYNG APNGLWYTAP EQMSELYHRA LAAGLQVHTH TNGDQATQMA
361 LDMLEPALKA HPSPDHRFTL QHCQMADAAQ FRKMRSLGMN VNLFANHHFY WGDEHYRLTV
421 GPERACRMNA CRTALDTGVP MAIHSDAPVT PLGPLFTAWA AVNRITASGR VQGEEERISV
481 SEALYAITLG AAYTLHMDGE VGSIEVGKRA DFAVLDSDPT QADPMALKDI GVWGTVQGGR
541 IFPASAL
SEQDB ID: 3101377AGC
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNFTLKQLR YVEAADRSGS IAKAAEELNI SQSSITAAID ALESGLGFDL FVRTPARGIR
61 TTASGRDALG LIRRFIHRSR QFEEELSSLG GLTRGTVRIA CYATAAPSFL PPVLRAITEG
121 FPDLSIQLLE GNMARIMEFL DEGEADVAFT YSEVLSERCD FEPLFDAPPY AMVPVDDPLA
181 GQASTTFAEL ATRPMVMLDL PHTRDYFVGM FEALGLTPNI AHSTRSSEIV RALVAGGFGF
241 SLLNIRPVDY RESESRYRIV PISGVPHTPV FGIATMAGAQ QTRMVRAFVQ SCIELRDRGV
301 FEDLVVRCPR
SEQDB ID: 3101377AGD
Reference:
3101377
Name: peptide ABC transporter, Subunit: periplasmic peptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHLFKGLIA ATAVASVLVG TTATAEEPRR GGTLKTQLGN NLRTLNSAVQ SGIVTGFPGA
61 QLFASPLRYD DSWTPQPYLA ESWEVSADGL KVTLNLVKNA VFHDGHPITS SDIAFSVKVI
121 QEAHPFKSMF APVTSVDTPD DHTAVLNLSH PHPGLMLAMS GQLMSIIPEH IYGDGQDFKT
181 HPRNIENVVG SGPFKLAEYK NGEHVILERF DDFFIEGRPY LDKIVMRIIT DSSARAIAYE
241 NGELDFGAFE SEPLIINRLK KVDHLTVTPT GYGAIGALDW LAINTTKGPL ADKRVRQAIA
301 YAIDKNFIQN ALMQGTVQDS NTGIHPDSPF YNADVNAYAL DLDKANALLD EAGYPMKGDE
361 RFAVTIDYGW PSAKPHVEYV RAALKKVGIN VEVRASADFP TWAKRMGTMD FDLSWDAVFN
421 WGDPSIGVHR TYLTSNIAKG VWSNTQGYSN ARVDELLDMA GKENDPEKRK ALYAEFQSIV
481 NDEVPIYFVQ TLPYHTVYSN KVMNAPVNGI WSTSSPLDQV WLKE
SEQDB ID: 3101377AGE
Reference:
3101377
Name: peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFLRVTLIR ILYAALLLVA VLVLNFSLMH AAPGDVADTI AQAAGGIDAE ALEQIRREYG
61 LDQPFLVQLG RYIGNVLQFD LGYSYFYSDK VTNLILSRLP ATLLLVISAQ LLALVVGVVL
121 GVFSARKPNG ILSHFVTFLA LFGYSAPVFW TGLLMLVMFS LMVPLFPVAG MRDVTVEGGF
181 FVQALDIAHH LVLPMLTLAS IFLALYSRLS RAAMMEVLGS DYVRTAKAKG LSPRQVVYKH
241 ALKNALSPVI TLAGLQLSAV VSGAVLVETV FSWPGLGTLA FQSILARDTP LILGILFFSA
301 LVVIVGNLLT DLALRLVDPR VGGKR
SEQDB ID: 3101377AGF
Reference:
3101377
Name: peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEPVTLPEE APEQARHPFA EAWEMFRRNH AALVALVLLV LICVLALIGP ALYGRDPYDM
61 VWAPFTRPGE NWDFILGTDY LGRDLLAMII SGARVSIIIG LSAAFVSIFI GVTVGALAGF
121 YRGWVEEALM RFTEFFQVLP TLLFSMVIVA LFGASLPMIT FAIGVVSWTA VARITRAEFL
181 RIRELEYVTA SRASGAKNAK LMFRVILPNA LPPIIVQSAL MVGSAILFEA GLSFLGLTDP
241 NVVSWGQIIG SNRTYFLDAS FTVTIPGVAI FVTVLCISLV GDGLNDALNP KLRAR
SEQDB ID: 3101377AGG
Reference:
3101377
Name: peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHLAGGRRAQ RCAQPETEGA LMTEALLKVE NLRIELTTRA GVAPVIDNLS FELGHGENIS
61 FVGESGCGKS MTALAIMGLL PEGVGRVASG RILLEGEDLT AASDSRLRDI RGNEISMIFQ
121 EPMTSLNPVY TVGEQIAEVL RAHQGLSARA ARDMAADLLD AVRIPNARAR AGDYPFQMSG
181 GQRQRVMIAM ALACRPKILI ADEPTTALDV TVQAQIFDLL RDLRRDTGTS IILITHDMGA
241 VAEMAERMIV MYAGRNAEIG PVDQIIEHPR HPYTKGLISC VPHIMATLTE DRPDLTEVPG
301 IVPGLREFGQ DRCLFASRCA YRTEQCLRQR PPAMGFDNGQ LADCWHAETL
SEQDB ID: 3101377AGH
Reference:
3101377
Name: peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRPLLDVE NLTVRFAVRR GGVFGRKQYL DAVDGVSFAL ARGETLAIVG ESGSGKTTTA
61 LAVARLVAAH SGRVELDGAD ILGLEGEALR QVRRKVQFIF QDPYSSLNPR QRAEDVVREP
121 LQSLTDMSRD DQQKVIDELF VQVGLRPEQK RLFPHQFSGG QRQRIGIARA LATRPELIIC
181 DEPVSALDVA VQAQILNLLR RLQKEFGLTY LFISHDLGVV QHMCDSIAVM YMGRIVEHGP
241 RLSLFNNPLH PYTAALLSAV PSVDKARRAA TRRILIPGDP PDPVNLPPGC RFANRCPVAQ
301 PQCRAREPSL RTVSGGQRVA CHLVGEDGTA PL
SEQDB ID: 3101377AGJ
Reference:
3101377
Name: SlyX protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHLEERIAH LTRTVDELSD VVARQQDEID RLTRRVAMLW QREADRSQEG SGGVILGDER
61 PPHY
SEQDB ID: 3101377AGK
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVIIDSAEG VTTITINRPE ARNAVDPDTA RALYQAFLDF EGDSDQRVAI LTGAGGAFCA
61 GFDLKSAGSG AADAWITSLD LPAGWDDPIS DPRPGPMGPS RLMLSKPVIA AIEGPAVAGG
121 MELAAWCDLR VMAQGAVAGV FCRRWGVPLI DGGTVRLPRI LGQGRASDLI LTGRAIAADE
181 ALAMGFANRI CPKGQALAMA RELARELTRF PQACMLADHL SARMAPADLA AALSREWRST
241 ATFAAEGRAG AARFAAGKGR GGDFADI
SEQDB ID: 3101377AGL
Reference:
3101377
Name: His-tRNA synthetase, Class: EC6.1.1.21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisS
Sequence:
1 MAKPKKTPRP KAETPKGFRD YFGAEVTQRT EMLRDIAGVY HRYGFEALES SAVETVEALG
61 KFLPDVDRPN EGVFAWQESE DDGAGDWMAL RYDLTAPLAR VYAQHRNDLP TPYRRYAMGP
121 VWRNEKPGPG RYRQFYQCDA DTVGSASMAA DAEICAMLSD TLETVGIPRG DYVVRVNNRK
181 VLNGVLETMG LADEGQRDAV LRTIDKFDKV GEDGVRELLG KGRLDASGAF IDGVGLSDDQ
241 AGPVLAFLTS RGADAATTVA NLRAAVGASQ IGVQGIDELE QIGDLLAAGG YGPDRIVIDP
301 SVVRGLGYYT GPVYEAELTF EIFDEKGRKR QFGSVSGGGR YDDLVKRFTG QEVPATGVSI
361 GVDRLLAALR EKGRIRTAER GPVVVTVMDR DRMADYQAMV AELRNAGIRA EVYLGNPKNF
421 GNQLKYADKR NSPVAVIEGG DERANGVVQI KDLILGAQIA ANATLEEWKE RPSQYEVARA
481 DLVAKVREIL AEQAG
SEQDB ID: 3101377AGM
Reference:
3101377
Name: His-tRNA synthetase-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITRARILEQ AARLRAGFEA AGAQGVETPI LQPAETLLDL YGEDIRARAY VTSDALRGEQ
61 MLRPDFTVPV VQKHMEHGAE PARYTYAGEV FRRQEHDPDR ANEYIQVGYE VFDRTNPAAA
121 DAEVFALIAQ ALDGLALRAA TGDIGILMAA VEGLKTTEPR KAALMRHIWR PRRFRALLDR
181 YAGRTTVPPA RAALLAESEP LADGAPEIGK RSRAEVEARI EVLRADAAAA PISDNEMAGL
241 DALLSVRETM PYALEHLRDI AVDLPQITPA LDRLEARIAA LRARGINVDR LDFEASYGRT
301 SMEYYDGFVF GFYAERRPDL PPIATGGRYD ALTRRLGNGA EIPAVGGVLR PGLMLLLAEA
361 ET
SEQDB ID: 3101377AGN
Reference:
3101377
Name: ATP phosphoribosyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLKLGVPSK GRLMEKTFAW FDKRGITLSR TGSDREYAGR VDGIEGVSLV LLSAGEIPRE
61 LAAGRIHLGV TGTDLVHEKL PLWDQQLEEL AQLGFGQADL IIAVPACWAD VDTLDDLDAA
121 AAGFRARHGH RLRIATKYHR LVRDFLTDAG VADYTLVDSQ GATEGTVKNE TAEAIADITS
181 TGETLRANHL KILSDGLILR SQATLWRSRT APLEAADKQV LELLLDRLAK
SEQDB ID: 3101377AGP
Reference:
3101377
Name: DNA polymerase III, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYAELCVTT NFTFLTGASH PEEMITRAAE LGLHAIAITD RNSLAGVVRA YAALKELRRE
61 ADEAIRIRSQ HRIDSCSRQE VGHPQPIARP EAPRLPRLIT GCRLVLRDSP LHWIALPRDR
121 AAYQRLTRLL TLGKRRAEKG DCHLDLADLL AGCTGMILIA LPQGRLDGAL PHLQQVQRRF
181 PGHVFLGAAP RYDGSDQAWL AACARLALRS SAPMVAVGDA LMHRANRRQL ADVLTCMREH
241 ITIDRIGTRA LPNAERRLKG HADMARLFRD HPAALRRTLD IAARCSFCLS ELSYEYPDEV
301 AEGETPQARL ERLTAEGIVR RYPGGAPQRV HELVAKELKL VAELGFPAYF LTVHDIVQFA
361 RSQGILCQGR GSAANSILCY LLGITDVSPD QIAMVFERFI SKYRGEPPDI DVDFEHERRE
421 EVIQWIYQRY GRHRAGLCAT VIHFRSRAAI REVGKVMGLS QDVTASLSGQ IWGQSNGGAD
481 PERMRELGLD PEDRRLALTI RLIGEIIGFP RHLSQHVGGF VITRGRLDEL APIENAAMED
541 RTLIEWDKDD IDTLGILKVD VLGLGMLTCI RKAFDLMREH EQRHLSIDTV PQEDAATYDM
601 LCAADAVGVF QVESRAQMNF LPRMRPRTFY DLVIEVAIVR PGPIQGGMVQ PYIRRRQGLE
661 KAEPFGPELA AVTARTLGVP LFQEQALQIA VVGAGYTAEE ADHLRRSLAS FRRMGTIGAH
721 RDTFIAGMRR NGYSQEVAER CFGQIEGFAD YGFPESHAAA FAMLAYVSAW LKCHHPAIFA
781 CALLNAQPMG FYAPAQIVRD ARDHQVELRP ICVNASDWDN RLERRADGAL ALRLGFRQIK
841 GFREEDAAWI VAARGNGYPD PQALWLRAGV TPAVLERLAE ADAFADMGIG RRDALWQVRA
901 IRGQAPLPLF NDPLDGEIIH EPQVTLPAMH LGEEVVEDYV SMRLTLRAHP MELLRPAIPG
961 LTPHDKLASV AAHRVSVCGL VITRQRPGTA SGVIFLTLED ETGVSNVVVW PKIYEQFRRI
1021 VMGGRLLRVT GTLQREGIVV HLIAQRIEDL SPRLADLGHP MDSAVGQTTP QTDSAPRPRP
1081 QPRAMHPREQ AKRLFPSRDF H
SEQDB ID: 3101377AGQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQANADRLY CLDTGAERAG LHCGMAYADA RAFCPDLQTR PADPAGDARF LRMLRRWATR
61 YCPWVGLEGR DGLVLDITGA AHLFGGEAML LSDMRQRLVR AGLAARIGLA DTRGAAWALA
121 HHGEGRTEPG QPLAALEHLP VAALRLSEEA VTGLTRLGLR RIGELERTAR APLTRRFGPE
181 LLLRLDQAMG RQPEQISPLA EPPHYGVRLT LPEPIGLFDD VMAGTGRLLD QLCARLKAQE
241 AGARSLCLTL RRVDQEAQTV ELRLARPLRD AARILPLFER GVREVDAGYG IDQMRLEATR
301 VEPQPVRQLS HVSSGRADRL DDLISRIGTR IGLENIQRFL PVDSHIPERG FTIAAAAWSE
361 PGGPWAPPRP RPILLFPPEP LTATGTRPPE RFRWRRMSLS TARATGPERI APEWWLPDEN
421 WRGGVRDYWH VETRQGRRLW LFHTPQNPGW FVQGEFA
SEQDB ID: 3101377AGR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSLNASFPL RPGRVHEACG PLAVAMAAVA AAQVSGLLWL RESWRPELIN PLGLADYFDP
61 ARLLLAQTRD QTDTLAVAEE SLRDGALPLV VIELSAPLSL TAGRRLQLAA KDGKTTGLCL
121 IPEGMGSNAA ETRWHCAPVF DPSDSTLMRW EIIKNKSGTL GAWHVRWNRA SRRLDLVSPA
181 GKRPGPAGAP G
SEQDB ID: 3101377AGT
Reference:
3101377
Name: taurine-pyruvate aminotransferase, Class: EC2.6.1.77
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tpa
Sequence:
1 MDGTFNENDL SRVVEADRAH IWHHLIQHKP FETNDPRIIV EGKGMRVWDQ NGKEHLDAVS
61 GGVWTVNVGY GRESICKAVY DQLMKLCYFA NSAGSIPGAL YAEKLISKMP GMSRVYYTNS
121 GSEANEKAFK MVRQIAHKKY GGKKTKILYR DRDYHGSTLA AMSAGGQDER NAQYGPFAPD
181 FVKVPHCMEY RKEELGLGHL SGAEFGRAAA DLIEEVILRE GPETVGALCL EPVTAGGGVI
241 TPPEGYWERV QEICKQYDVL LHIDEVVCGI GRTGTWFGYQ QYGIKPDFVT MAKGVASGYA
301 AIACMVTTEE VFDLFKDNTD DPLNYFRDIS TFGGCTAGPA AALENMRIIE DEDLLGNCTA
361 MGERMLGNLH ALMEKHAVIG DVRGKGLFLG AELVANRETK EPVSEKQAQA VVADCMAQGV
421 IIGVTNRSIP GRNNTLCFSP ALIATAEDID AITDAVDQAL TRVFG
SEQDB ID: 3101377AGU
Reference:
3101377
Name: taurine ABC transporter, Subunit: periplasmic taurine-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tauA
Sequence:
1 MMTAKTKLLG AVAGLALAIG AMPAAVAAEG EITVAYFLEW PMPFEYAKQK GTYDEVLGVK
61 VNWVSFESGV KMSAAMASGD VHLSVSQGVP PFVVATSAGQ DLQILDVAVS YADNDNCVVR
121 SELEIDKDNA GELAGKKVAV PLGTAAHYGF LKQMNHFGVD VASMDVVDMD PPDGAAAIAQ
181 GAVDMFCGWG GSLRRALEHG NVLLTGDEKT ELGILVFDVT SGPAGWVAEN SDLVAKFLKV
241 TADANAMWAD EANRAEMLPL IAKDAGMDEE ATASTIATFK FPTIEQQLSG GWLGGNAQTF
301 MKGVADVFVE AGSIDSALDT YENAVNTGPL SAAGGM
SEQDB ID: 3101377AGV
Reference:
3101377
Name: taurine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tauB
Sequence:
1 MSGLSIENIS MRFDLPNGSS VQALKNVSLH LKEGELMSVL GPSGCGKTTL LNIVAGFLAP
61 TEGHIAMNGH KVHGPNAERG MVFQQGALFE WMNVRDNVSF GPRMKGQRAS QYGSHVDHLL
121 DVTGLGDFKD KAIYELSGGM QQRVALARCL ANDPDVILMD EPLGALDALT REKMQGLVLK
181 LWKETGKTII LITHSVEEAL LLGERLLVMA PRPGRIHKEY RLPYADMGVN ADLREVKKSE
241 GYSQTREEIL SMIWDMEEEI MGRTEAAQ
SEQDB ID: 3101377AGW
Reference:
3101377
Name: taurine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tauC
Sequence:
1 MTASRSTTII FDKNDETSRK EGAKIVAIDG TPISIGQSIK TAAGQFSLTD KGAISFQPPS
61 GLQMEPIWLP PPEAVVSRLG EIAKSGYRDS TLWEHLGFSL FRVIAGFFFG ALVGIPLGYA
121 MGLSDWFRGW FDPIVEFMRP VPPLALIPLV IIWAGIGETG KIILLFLAAL WIMAIAARSG
181 VSGVRISKVH AAYSLGASKA QIMRYVIVPN SLPEIFTGAR VAMGVCWGTV VAAELVAAEK
241 GAGMMIMVAS KFQLTDIVIM GIILIGVIGF GIDILMRWAE RVLVPWKSKG
SEQDB ID: 3101377AGX
Reference:
3101377
Name: AMP-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGSTIYDQH LDRTPANFTP LSPLSYIERT AAVYPDYPSV VYGDRRYTWA ETYTRCRRLA
61 SALAGRGLGK GDTVSIIAAN IPEMYEAHFG VPMAGAVLNA INTRLDAPII AFILSHAEAR
121 VLIVDPEFSE VVRDALAQID RPDLLVVDIE DPSFAGGAPV GTLSYDALLA EGDPDFDWSL
181 PGDEWDAIAL NYTSGTTGNP KGVVYHHRGA ALNATSNILT WGMPQHAVYL WTLPMFHCNG
241 WCFPWTMAAN AGVSVCLRAV RDEPIYRAFR EEKVTHFCGA PIVLNMLANA PDHMKDFDHQ
301 IKVMTAGAPP PAAVIEKMEA MGVDVTHVYG LTETYGPSVV CAWKEEWDGR PGAERAALKV
361 RQGVRYVALS GLMVADPETL EPVPADGETM GEIFMQGNIV MKGYLKNPDA TDRAFRGGWF
421 ASGDLGVMHP DGYIALKDRS KDIIISGGEN ISSVEVEDVL YKHPAVMEAA VVARPDEKWG
481 ETPCAFVELK PGQSVEAADL IAHCRANMAH FKAPKTVVFG ELPKTSTGKI QKFLLRERAR
541 AL
SEQDB ID: 3101377AGY
Reference:
3101377
Name: agmatinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASHGYDSGR LNLPFVGICT FGKYPYVEDW DSIDADAAIL GAPFDFGAQW RSGARMGPRA
61 IREASTLFSF GHAGAYDFED DITYLDPAKV RIVDIGDADI VHTDTIKSHA NIEFGVRKIL
121 QAGALPVVLG GDHSINIPCI NAFDDQDPIH VVQIDAHLDF VDERHGVRYG HGNPMRRAAE
181 KAHVTGLTQI GIRNVSSTAK DGYDAARAMG SDIQSVRHVR RMGTAAMLAR IPEGVRYYLT
241 IDIDAFDPSI APGTGTPSHG GFLYYEVLEL IDGLARRGEI AGIDLVEVAP DYDQSGSTSI
301 LAAQLLMNTL GRVLHHRRR
SEQDB ID: 3101377AH
Reference:
3101377
Name: voltage-gated Na channel
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQRMQAFIDR PGFGRFITAV IMLNAVVLGM ETSPYLMERW GGLILAADRI CLGIFIVEIA
61 LKLTAQRQRF FLNGWNLFDF VIVGIALIPA AGGLSVLRAL RILRVLRVIS VAPRLRRVVE
121 GFITALPGMA SVFLLMTIIF YIGAVIATKL FAASFPDWFG DLGLSAYTLF QIMTLESWSM
181 GIVRPVMQVY PYAWLFFVPF IMITTFAVVN LLVGLIVNSM QDAHHAEDGE RTDAYRDEVL
241 ARLEQIDQRL NALGETKK
SEQDB ID: 3101377AHA
Reference:
3101377
Name: maleylacetoacetate isomerase, Class: EC5.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hmgC
Sequence:
1 MTETILYDYW RSSASYRLRI ALNLAGIAYT AVPVDLVKGE HRSAEHLARN PQGLVPVLDI
61 DGLRLTQSLA MLDYLDQTRG LGLVPADPAS RAQVQALAQA IAVDIHPVCN LKVARHATQL
121 SGGAEDMPGA WMRHFIRPGL QAFETRLAGF EQSPYCCGDA PGLADICLMP QIYNARRWEV
181 DISDLPRLLS VEAACNEHPS FSAAHPDRHA PVA
SEQDB ID: 3101377AHB
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIEKIHHVA YRCKDAKETV EWYGKMLNMD FILAIAEDHV PSTHEPDPYM HLFLDAGNGN
61 VLAFFELPTK PEMGRDPNTP VWVQHIAFKV KDRETLIEFK EHLEANGVEV LGVTDHSIFH
121 SIYFFDPNGH RVELACPDPE EEALLKRMDE VKWDMLEEWS RTKKAPQHAA WLHAKELNKT
181 V
SEQDB ID: 3101377AHC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDLTLTPNI AGADDFYAEL LAAHDGLDKA ESDALNARLV LVLANHIGDR AVLSKALKAA
61 AFKE
SEQDB ID: 3101377AHD
Reference:
3101377
Name: monooxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPRPTGCAQ TWEERPMNKI FEVPLYAYAR SPDQDASSPV RHKVIVIGAG PIGLAAAIDL
61 AQQGIEVVVL DDNDKVSFGS RAVCYAKRPL EILDRLGCGQ PMVDKGVEWN LGKVFFDDRQ
121 VYDFNLLPEG GHQRPAFINL QQYYFEEYLV NRVRELQETG APIEIRGRNK VEAIGTHPDH
181 VKLEVETPEG SYTVEADWLI ACDGAGSPVR SMLGLDFVGR VFEDNFLIAD VIMDAGFPTE
241 RWFWFDPPFN RGQSALLHKQ PDNVWRIDLQ LGWDIDKERE KRPENVIPRL KAMLGEDVQF
301 ELEWVSIYTF QCRRMEKFRH GRVLFAGDAA HQVSPFGARG ANSGLQDTDN LIWKLKLVME
361 GKAPESLLDS YDMERVHGAD ENILNSSRST DFITPKSEMS RILRDAVLDL SEQYEFARPL
421 VNSGRLSVPC TYDGSPLNSA DALLDGPART RPGSPCPDAP LGDGFLLPKL GDRFILLTID
481 ADAPDSIEEE GVEVTRLALS VKDDPTMELK RRYLGDNDSA VYLIRPDQHV AARRATFDET
541 QFRHAIRRAT GKE
SEQDB ID: 3101377AHE
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKAFASQGD MSEKKISFTE VGEGLYAFTA EGDPNSGVII GDDSVMVVEA QATPRLAQKV
61 IDCIREVTDK PISHVVLTHY HAVRVLGASA FGAGQVIMSD TARSMVVERG QEDWDSEFQR
121 FPRLFEGHES IPGLTWPTTT FSDSMTVYLG KRRVDIMHLG RAHTAGDAVI HVPDQNVMFT
181 GDIVEYHSAC YCGDGHFNDW GNTLDNIAWF DVDAIAPGRG DALVGKEMVN AAIENTRDFV
241 QSTYRPAARV AARGGSLKEA WDAVRAECDP KFADYAIYEH CLPFNVARAY DEARGIDTPR
301 IWTAQRDLEM WEALQG
SEQDB ID: 3101377AHF
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSLDHIQI AIPAGGEDAA RAFWCAGLGL AEIAKPDALK ARGGLWLALN GAELHLGVEP
61 DFTPARKAHP GFAVIDIDAV AARIEALGQS PRWDDTIENR RRFFAEDPFG NRLEFLERD
SEQDB ID: 3101377AHG
Reference:
3101377
Name: fumarylacetoacetase, Class: EC3.7.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hmgB
Sequence:
1 MPLLKSWVAS ANSANHPFPL NNLPYGVFST GEDEPRCGVA IGDMILDMAA AEAEGLVALT
61 DYPLFDVPYW NDLMEEGPAV WAALRERLTA LLSKGSKEQE AVEPLLVPMA EATLHMPLVV
121 SEYTDFYAGR QHAQNMGAIL RGSPDLPANW LHIPIGYNGR ASSVVVSGTP IHRPNGQTKA
181 PDAEMPSFGP SKRLDIELEM GAIVGTGSEF GQPITVDEAD AMIFGYVLLN DWSARDIQGW
241 EYQPLGPFQG KAFGTSISPW IVTAAALEPF RAPTPPREKE LLPYLKGSRD GLYDIELEVL
301 MQPEGADRAS VIARTNYSRM YYSAAEQLCH HAIGGCAMNA GDLLGSGTIS GPERGEFGSL
361 MELSWAGREP FTLETGETRG FIEDGDTLTL RGNARGDGYT IGFGDCTGQI LPAKAWG
SEQDB ID: 3101377AHH
Reference:
3101377
Name: homogentisate 1,2-dioxygenase, Class: EC1.13.11.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hmgA
Sequence:
1 MNRPTDPHLL TQAATPAGTT AGYMPGWGND FETEALPGAL PQGMNSPQKC NYGLYGEQLS
61 GTAFTATRPE RTWCYRIRPS VKHSHRYEKI DLPYWKSAPC IDPDVISLGQ YRWDPVAHSG
121 AGLTWLTGMR TMTTAGDVNT QVGMASHIYL VTESMVDDYF FSADSELLVV PQEGRLRFAT
181 ELGIIDVEPK EIAILPRGLV YRVEVLEGPC RGFVCENYGQ KFELPGRGPI GANCMANPRD
241 FKSPVAAFED RETPSTVTVK WCGQFHTTKI GHSPLDVVAW HGNYAPVKYD LRNYCPVGAI
301 LFDHPDPSIF TVLTAPSGVP GTANIDFVLF RERWMVMEDT FRPPWYHKNI MSELMGNIYG
361 QYDAKPQGFV PGGMSLHNMM LPHGPDKEAF EKASNANLGP DKLDQTMSFM FETRFPQHLT
421 EFAAKEAPLQ DDYIDCWTSL EKKFDGTPGK K
SEQDB ID: 3101377AHJ
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETNLPEND DFELRSFLPF LLNQAAEQSS LEFQQVYKNR YGMLRTEWRV LFHLGNSGEM
61 TAKQIGDLAL IHKTKVSRAV AKLAQRRYLT RTRDERDRRS ERLSLTPAGE AVYRELRGIA
121 EQYDARMAAK FTKGEVALLR VMLRRLAAME
SEQDB ID: 3101377AHK
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDAAGQFHAE ADASSTQLVS WLLQRGLEGA RQDELLHGYC ERLVELGVPL FRLHVAQSAF
61 HPKYGGLGFN WFRDQGVSSE EYGYTETPNA AWIRSPLYHL LDSGEQEYRE RLLDSNADSR
121 FPLLNELRER GATDYFAAGV ILEKREHFER IDPTNTPEGV LISWASDGPD GFSDTDLRLV
181 RESLPQLALA LKSAANRQMA GDLLQVYLGR DAGRRVLSGE IQRGSLQQID AVLCYFDLKD
241 FTALTERTPG PELIAMLNDY FGMAVAIIQG HGGNILKFLG DGILAMFNLE TPEQSAAAGL
301 DAVVQMRRCM EQKNAERQAQ GETTTGVTLA LHAGEILYGN IGAENRLDFT VIGPAVNLTV
361 RLSGLHRSVG RNIILSEPVA KIAGHTAHDL VSLGRYMLRG VSEPQELYTI YKAPA
SEQDB ID: 3101377AHL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHIIVVGNE KGGAGKSTVS MHVASALARL GYKVNTLDLD LRQRSLGRYF ENRTAFNKAS
61 GLDLPSPRNH DLPEIDPASL KPGENVFDHR LSAAVARLEA DSDFILIDCP GSHTRLSQVA
121 HSLADTLVTP LNDSFVDFDL LARIDSSGEK ILGPSVYSEM VWNARQLRAQ AGLKPIDWVV
181 VRNRVGTQRM VNKEKMERAI EMLASRIGFR IAPGFSERVI FRELFPRGLT LLDLKDVGVK
241 QLNISNIAAR QELRDMMKAL QLPGVEIDF
SEQDB ID: 3101377AHM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLTADFWV HAYLARLRLM NIPAYVMAHG DDTAGAVLVK LSTLDGKAVA YHREYDLMSG
61 ARSWTVLTSG PETEVDAAIT RQRSFDPDLW VIEVEDRQGR HLLDQDGLA
SEQDB ID: 3101377AHN
Reference:
3101377
Name: GTP-binding protein, Isotype: era
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: era
Sequence:
1 MTTRAGFVAL IGEPNAGKST LLNRMVGAKV SIVTHKVQTT RTRIRGVAME GEAQIVFVDT
61 PGLFQPRRRL DRAMVAAAWG GAADADIVVL MIEAHRGITE GVERILEGLA EIAKGRTVAL
121 AINKIDRVPA EKLLGLSEAL NARFEFARTF MISAERGHGV EDLRKWLAAE LPESPWLYPE
181 DQIADLPMRM IAAEITREKL TLRLHQELPY QLTVETENWE ERKDGSARID QVIYVMRDGH
241 KGIVLGKRGE TVKAVGQAAR VELEEFLDRK VHLFLQVKVR PNWLEEAERY SEMGLDFKDG
301 N
SEQDB ID: 3101377AHP
Reference:
3101377
Name: multi-Cu oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRRDLLFGG AALLGAAGLA RLGSATAPPE AQDLVIQRAA YRLRAQDTLG MVSLSPDAPP
61 PVLYGRQGQE MRFTVRNTLD DYTAMHWHGL RIANAMDGVP YLTQMPIGPG EGFAYAYTPP
121 DAGTYWYHPH CMTMEQMAHG LTGVMVIAEA EDPGFDSEEV INLRDFRLDA ADAFLPAYTA
181 RGAARGGTMG NLQTANWRQG PVYDHGAGSL VRLRVVNTDT TRIYKLYLDG GTARIIAWDG
241 HPVRVVLPVP RAGAPLLLAP GQRVDLAVAM PAEEGRQIAL MADLPGQPPR LMAGLRSVGS
301 GSRRDLAELK PLPRNPVAQP DLERAELHEF VFGWTPEGDA PNDGFCGTLG YTFWSINRTP
361 WAGDAAKDVG PLAVLERGKT HVLRLRNESP NQHPIHLHGL AFVPIASNRR SLPPLWTDTM
421 LLLKDEVIDI ALVADNPGDW AFHCHVIEHQ KTGLTGFLRV T
SEQDB ID: 3101377AHQ
Reference:
3101377
Name: isobutyryl-CoA dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHDGQDPMT MTTQTVLLPD LLSLTGAALA PVDALFERAR ETVREMVSEG GRVSGALIDA
61 NQTAAHGLSW LATYQQSLRQ MQRWAEALQA EGKFGEIEQL IHQIAFGEYL WQIYGGIQMN
121 QGEVVRLQDL GLTQDDARGL MAPEVMTLCD KGNTQAARTR LVELMQDQAG ATMYGASGLD
181 EELEMIRDQF RRYAVEKVEP FAHEWHLKDE LIPMEVIEEL AEMGVFGLTI PEEFGGFGLS
241 KASMVVVSEE LSRGYIGVGS LGTRSEIAAE LIIAGGTVEQ KASWLPRIAS AEILPTAVFT
301 EPNTGSDLGS LRTRAVKDEN GDFKVTGNKT WITHAARTHV MTLLARTDPN TTDYRGLSMF
361 LAEKTPGTDA EPFPTPGMTG GEIEVLGYRG MKEYELGFDG FHVKGENLLG GEEGKGFKQL
421 METFESARIQ TAARAIGVAQ SALDIAMQYA QDRKQFGRAL IAFPRVSSKL AMMAVEIMIA
481 RQLTYFSAWE KDHGHRCDLE AGMAKLLGAR VAWAAADNGL QIHGGNGFAL EYKISRVLCD
541 ARILNIFEGA AEIQAQVIAR RLLG
SEQDB ID: 3101377AHR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGDAEGSLGR LGVETAVVSG AYFVTILLTF ELVVPLQNLV FPEYSSRASL LFLPHGVRVL
61 SAWLLGWRAV PALLPGVIAA FAYVGGLDVL LPSRLIAIAI AVGAVPACFH LLRVIGLDLF
121 PSRDRAPCWI CVMGVGIVTS LIIASLTNMA FGSDPIEAVA YLIGDISGLF FGMLALLYAF
181 RLLGRSA
SEQDB ID: 3101377AHT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTLSKLAEL RRLLHSMERT LGLQDLSPVE RDIYYAASEL SGDDQRIRTV GLIEHALLET
61 VSRPTFFRAL KSLVNKGYLA QCSTMNRGCY VVRSPES
SEQDB ID: 3101377AHU
Reference:
3101377
Name: molybdate ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.29
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: modC
Sequence:
1 MKLEVELRHP MQGFTLDVAF AAPPGLTVLF GRSGSGKTTV INAVAGLLRP ERGRVALGGE
61 TLQDSASRIW LPPHRRRMGY VFQDARLFPH LSVRQNLGYG RWFAKTSGPT SFAQVIEMLG
121 IGPLLDRRPG ALSGGERQRV AIGRALLANP RAILADEPLA ALDEARKGEI LPYFERLRDE
181 TKIPILYVSH SAAEVARLAT TVVVLQDGRV IRQGSAAEVL ADPAVTPLGA RAAGAILTAR
241 VVAHHADGLT ELEAGGERLF LPRISHPEGT ALRLRIPAQE VILSRQRPEG LSALNILSGH
301 VAQIRSGDGP GALVSLSTRA GTVLARITRR SATALELREG TPCHAVIKSV AIAPEDIGR
SEQDB ID: 3101377AHV
Reference:
3101377
Name: molybdate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: modB
Sequence:
1 MTWLGPEEWQ AVALSLKVSA WATALSLPLA LLVAHALARG RFVGKALLNG LVHLPLILPP
61 VVTGYLLLLS FGPTGTLGQA LASVGLTLAF HWTGAALAAA VMGFPLMVRA IRLSIEAVDP
121 KLEQAAATLG ASRLWVFATV TLPLILPGLI AGAILGFAKA MGEFGATITF VSNIPGQTQT
181 VPSAIYAFLQ VPGGESAAAR LVMISVALAL GALLASEALA RRAARRVAGT
SEQDB ID: 3101377AHW
Reference:
3101377
Name: molybdate ABC transporter, Subunit: periplasmic molybdate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: modA
Sequence:
1 MPEPSLPLSL FFRALACALL LAGPARAEQI TVFAAASLKT ALDDIAAGFE ATTGNSVALS
61 FAGSSVLARQ IGLGAPAQIF ISANPEWMDW LAEQGRIDPT SRRDLVSNRL VLIAPAGHAP
121 SHPLADLAAG PGRIAMALVE AVPAGIYGKA ALTHLDLWDQ LAPRVVQTDN ARAALALVAT
181 GAVPYGIVYA TDAQAEPRVM PLYTFDTDTH PPIRYPAALV TGQDSAAARA LLDHLASAEA
241 RAILFRHGFL PVEE
SEQDB ID: 3101377AHX
Reference:
3101377
Name: Mo-binding transcriptional regulator, Isotype: ModE-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGPASLAPAR MTRQTRAMSD TRPPPVYKLR LVFGEVGMIG PGKAALLDHI AQTGSIAAAG
61 RAMGMSYKRA WQLVETMNAM FRNPVVIRAR GGAQGGSATL TPTGQEVLSA YRRFEAACHS
121 AGAPHAAELH ALLRKDEAGS
SEQDB ID: 3101377AHY
Reference:
3101377
Name: glyceraldehyde 3-phosphate dehydrogenase, Isotype: I, Class: EC1.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gap-1
Sequence:
1 MTLKVAINGF GRIGRGVLRA LVESGADDIE VVAINDLASP ETLAHLLKYD SVHGRLQAPV
61 LVEGDRMIVG RSSIRLSAIR NPEDLPWADV DIAYECTGLF TEREQAARHL KNGSKRVLIS
121 APGKGADRTV VFGVNDGALT ADDVIVSNAS CTTNCLAPVA MVLDHAFGIK TGYMTTIHAY
181 TGDQPTHDTA HRDLYRARAA SVSMIPTSTG AARAISEVLP HLKGRLEGSA IRVPTPNVSL
241 VDLSFVPERP ATREAVNAAI RTAAQGPLAG ILAYEEDPLV SIDFNHDSHS SCFAAAQTSV
301 TADGLVRVVS WYDNEWGFSN RMLDTGRRIG ALLITPQRLA G
SEQDB ID: 3101377AJ
Reference:
3101377
Name: ErfK/YbiS/YcfS/YnhG family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLVKPKSDF ARPRFRGIPG TIEKKNEAVI MDRRHFGLGA AAALGLSACG SQDSKFRRYY
61 GPAVTSIVIN KGARKMYLLN NEKVLKEYKV ELGFAPAGHK QFEGDGKTPE GTYLIDRRNP
121 NSAFHLSLGI SYPNSRDVAY AQAMGKKPGG EIFIHGEPNG LRDRKKAKKQ PDWTAGCIAV
181 KNDEIEEIYA MVRDGTVITL RA
SEQDB ID: 3101377AJA
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEELLIETR DLTVGFPVGG RLFNKKTLKA VDGISIGIPR GSFFGVVGES GSGKTTLGRA
61 LLNAVPITGG HASYDDGEVR YDLATLSGAE LKDYRKRAQL IFQDPYAALS PRMTVRDIIA
121 EPLEVMGLTN SREETDTRVR EIAAKCRLNL EHLRRFPHAF SGGQRQRISI ARALVSGPRF
181 VVADESVAAL DVSIQADILN LLKNLQSELG LTYMFISHDL SVVAHSCDHV AVMYLGRIVE
241 SAPTRKLFAA PRHPYTKALF SAIPSLDPDD RGRAQKLEGE IPSPTNQPLG CKFHTRCPYA
301 TDLCKTHEPV LQVEGDHAVA CHRWQELL
SEQDB ID: 3101377AJB
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLIDVENLT LQFRTDEGLI TAVEDVSFSL APGEVMGLVG ESGSGKSVTA KALMKLNAAN
61 AVYDPATRIT LHLDSGPVDV MSLKRPRDME IVRGGAVSMI FQEPMASFAP AMTIGSQMVE
121 QLLIHTDLSK RGARDLSIEM LDRVGISDAA SRFNQYAFEL SGGMRQRAMI AMALSTRPKL
181 LIADEPTTAL DVTIQAQVID LMKDLVAEFG MGIIFITHDL GVVAQTADKV AVMYLGRMVE
241 QGPVREVIRN PRHPYTRGLI DALPQLDDLD KPLMPVPGDI PSPLERPEGC VFHTRCTRII
301 GDICRTAVPG WADTGPDHRT ACHLCHQDTA A
SEQDB ID: 3101377AJC
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPSQTAKE AYFTASQRQL IWARFKKQRA AMVAATVLVV LILSGLFAPF LSPYDPTVAG
61 RDKDYLNGAP QIPKFCDKNG CSLRPFLHTV TRERSLATNF RWVEKVNEDE RRYVQFFVQG
121 DSYKLFGFIP GNIHLFGMDQ GYVHLFGTDS AGKDIFSRTL HAVWTSLQVG TLGVLISFVL
181 ALAIGGIAGY YGGMIDSVIQ MVTDAVRTIP SIPLFMAIAA FIPPEWSAET RFFVITLILG
241 LVGWPTLARR VRTHLLTERN QEYVLAAQLC GASPSHVIRR HLLPSFTSYI IVDLVISFPY
301 VVLSETALSF IGLGLKDPVN SLGVMLQNVT KADVLLNYQW YFIPVLFFIA LVMAFVFVGD
361 GLRDAADPYS ESRK
SEQDB ID: 3101377AJD
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHFARFAAT RAVMALVTLV IVSLIVFSLM ELVPGDCAER YLAYKNTQGS AITLADIAAE
61 RARLGLDQPF LTRWTSWLAG AFRGDFGDSC ILRVDIAQLL GDKFWISLWI CLGALLLAYM
121 IAIPVGIISA ASRNPYLNNS LRVVSYLGLA MPNFLLALMV MLISTVYFGE TLTGLFSPEY
181 KEAPWSVDRV LDLLKHAWLP VFILGWSATA FALQTVRALM SDEIGKLYVT AAAARGLYGR
241 RLLWRYPARH ALGPIVNSLG FDLNRIFNEL PIVALILTLT EAGSLLLEAL ARSNDQQLAG
301 AIIFLLTASI VTLNFATDIL LAVIDPRVRK SILR
SEQDB ID: 3101377AJE
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: periplasmic oligopeptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRILLSGVA ALALPGAALA ACPAVTVADP MGVAAGTFPQ QYDLAEFQSA AGCTMDFAEN
61 PAIGDLNARI KGNPALPPLA ERLPSEPLVV APYDGIGQYG GQFDALSNAT ESGTSDFLSV
121 RHVNLFRYSD DLQTVVPNVA KSWEWNEDFT QLTVHLRAGH KWSDGAPFTA ADVVFWYDNL
181 MMDTNVMAEP KDYALAGGKP MKVEAVDDTT VRFTLEAPKP GLIETFSFTY VQPFQPKHFF
241 GQFHPALDAN ADANAQALGY ENGYDLIKAY YGNSDWMDTP SPMLTAGDKL AGLPKDTMPT
301 LESHILVKET TEGRHYVANP YFFQVDTAGN QLPYISNMDE TYVGDEEVRT LKLLNGEVDY
361 KSQAVNLTQA PVLLEGQEKG NYTIDVKPGI ASATLTFNVT SEDLGKRAIF NDVRFRAAMS
421 VAIDRDQLNE VVAFGLGTPN QYIGFSPRPD FIDAKWESHE IAFDPDRARA LLDEVGLVDK
481 DGDGDRDLPN GDPFVLDWQF STQASSSQLV ELIAQNWTDV GVTTTIKEVT SDEYRSSQSS
541 NTLDVMMWGK GQPAGSILGD GEIWVPPFDG YFDVRTGMLW AEWISSNGSA GVEPPAWVAE
601 LKSELDTYQS SAPGTETSIA AAQKMVEIMT GQVLFIGTIN APAPVYHSNK LKNFPEFKTQ
661 SYEFYRTYPY RPAQWWLSE
SEQDB ID: 3101377AJF
Reference:
3101377
Name: transcriptional regulator, Isotype: DeoR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDADPKVPH RGHELLDVLA RLGGSARNAQ IAQVMDVSEE TVRRLVKTLA KQGKVERVHG
61 GTYLRGSQDA PMYSGALEQQ PKEKTRIAKG VLELIRDGMT LFINVGSTTT YVAEQLRERR
121 DLTIVTNSIS TVASLADHNG SRVFLAGGEV SRSERGCFGR ATEDFARRFA YDVLVIGADA
181 MSPELGVLAA NPREAELTRA LLGNATRVIV AADYRKFSAI APCIAAPLEA ITDLVTDAAP
241 PDALQDALDR CGVATHLAAK SGRITTRTPP PQDVGHSNTN RKTLSFPTEV S
SEQDB ID: 3101377AJG
Reference:
3101377
Name: invasion protein, Isotype: IbeA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARRISEPAR EIDIIHETDV LVVGSGPGGL PAALAAARAG AEVTLVERFG CFGGNLTVVG
61 VEGMHWYRHE QTIESNGIAR EFEEKAKEMG AAVPESQSLS HEIDSEGFKL VADRMVLDEP
121 NIRPMLHRFF VAPLMEGDTI IGIVTESKSG REAILARRVI DATGDADVVT RAGAPVYKTP
181 AEQMMAASVM FHLAGVDKQR FMDGIKADPQ TYRDWGGGGE WNIETSGKED DMFSPFLKKP
241 FQQAIRDGLI PPHLNTIAGT WGAVHDTGEL TYMNLIHLDG CDGTDPDSLT TYEIEGRRQT
301 MLAIEALRRY TPGCENIRLR NFGMSIGIRD TRKVDCLYNM TETDVREQGR FEDSIGIFPE
361 FIDGYGILIL PTTGRYFQMP YRNLLPRGVK NLLVAGRITG GDRISHAATR NMACCAVTGQ
421 GAGIAAALSV KSNRPLDEID PLLIQKELER QGGRHH
SEQDB ID: 3101377AJH
Reference:
3101377
Name: phosphoenolpyruvate carboxykinase, Class: EC4.1.1.49
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pckA
Sequence:
1 MTSGRVNPQF RLEDQGIEGL GNVYYNFMEP ALIEAALKRG EGTLGNGGAF LVTTGKFTGR
61 SPKDKHVVKT ASVADSIWWD NNAAMTPEGF DALYDDMLAH MKGKDYFVQD LVGGADPAYS
121 INVRMVTELA WHNLFIRHLL RRPAREDLNE FVADFTVINC PSFQADPAKH GCRSETVIAM
181 NFDRKLILIG GTEYAGENKK SVFTLLNYML PEKGVMPMHC SANHAVGNPV DTAVFFGLSG
241 TGKTTLSADP ARVLIGDDEH GWSDRGTFNF EGGCYAKTIN LNPEAEPEIY ATTTKFATVI
301 ENMVFDEETK ELDFDDDSLT ANMRCAYPLE YISNASVSAL GGHPKNIIML TCDAFGVLPP
361 IARLTPAQAM YHFLSGFTSK VAGTERGVTE PQPTFSTCFG APFMPRRPEV YGNLLRDKIA
421 RHGATCWLVN TGWTGGAYGV GSRMPIKATR ALLTAALNGS LNNAEFRKDG NFGFDVPVSV
481 PGVAEVLLDP RRTWDDQGAF DKQAAKLVQM FADNFEQYVP YIDEDVKAVA IG
SEQDB ID: 3101377AJJ
Reference:
3101377
Name: DNA-binding response regulator, Isotype: ChvI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: chvI
Sequence:
1 MSKIALVDDD RNILTSVSMT LEAEGFEVET YNDGQAALDA FNKKLPDMAV LDIKMPRMDG
61 MDLLQRLRQK TQMPVIFLTS KDDEIDEVLG LRMGADDYVK KPFSQRLLVE RIRALLRRQE
121 AVAGDAAGTT TGETKVMERG HLRMDPLRHA VSWKGVDVSL TVTEFLLLQA LAQRPGFVKS
181 RDQLMDVAYD DQVYVDDRTI DSHIKRLRKK MRSADPDFAA IETLYGIGYR YNEE
SEQDB ID: 3101377AJK
Reference:
3101377
Name: sensor His kinase, Isotype: ChvG, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: chvG
Sequence:
1 MRDTGTSESN RSGDVVLGDD WVAPHSTVSK ELRVKRARRS LFSLRGSPLT RKIITFNLIA
61 LIILVAGILY LNDARNGLVV QRAGALVGET QLVADVFEAQ ITGSAPVNLA TGDGVDVDAT
121 LEDLSLRRGV EVFVFDTARN MVGQTKGTHV NPRLQALFED KTGSTIITDA LSGLWRAVSS
181 IFANAPKSSA PALEQQIASL LPEALAGETR VETVLNTAGG TVIAAATPIL QAGTPIGAVA
241 MASPAGEIDA LARRDRERVL QMFVVALLVS VGLSLVLAST IANPLADLAE AAELGRDRNS
301 RRMNPGRIRI PDLSARPDEI GRLSRALRGM VSALYNRIEG NEQFAADVAH EIKNPLASLQ
361 SAVGTLRMVR REDQRDKLLS VIEHDVRRLD RLVSDISNAS RLDAELVKEE EQSFNLLTML
421 DNLNQYLGED ARSKGIDYIT DMPPDPIMIQ GLEARLAQVF VNLITNAISF CEDGDAIRVW
481 TRRRANRVLI VVEDTGPGIP DEALAKIFKR FYSQRPEEHF GNNSGLGLAI SKQIVEAHGG
541 VIWAENIRPT EADVTSDPLG ARFVVGLPI
SEQDB ID: 3101377AJL
Reference:
3101377
Name: hpr Ser kinase/phosphatase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPRIRWARA LSWACRSKPV GPAALQDLKE RDCVTVHASC AAVAGQGLLI TGASGSGKSA
61 LALEMMALGA RLVADDRVIL RAAPHGIVAD APDTIRGMIE ARGLGLLRAE PAGPVVLSHV
121 LDLDRSEPNR LPEFREILLL RHSVPLLFRP DTPHLAASLI QLLKAGRVAP MR
SEQDB ID: 3101377AJM
Reference:
3101377
Name: ATPase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGPSGAGRS TAINVLEDLG FEAIDNLPMG LLMRLLDGPA LRRPLALGLD ARNRDFSTEG
61 FLDLSKRLAS LEGFQVTTLY LDCSADILLR RFSETRRRHP MSPGSSPLEG VEHELELLRP
121 IREAADTLID TTALNVHQLR REVERWFAPS GGSMLAISVE SFSYKRGLPR GLDMVFDCRF
181 LANPHWQPDL RAADGRDPAV AAYVHADPQY LPFFTRVTDL LQSLLPAFRS EGKAHLSVGF
241 GCTGGQHRSV ALTEAVAKAL AEAGGQVSIR HREMERRKPD ARPD
SEQDB ID: 3101377AJN
Reference:
3101377
Name: PTS system, Isotype: man family, Subunit: IIA component
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGIVIVAHG GLAREYLAAV EHVVGHQPGL VAIAIEADHD RAEKQQEILA AANAVDTGDG
61 VVVVTDLFGG SPSNLSLRAC APADRRILYG ANLPMLIKLA KSRHLPVGDA VRAAIEAGRK
121 YINTQNVTLD
SEQDB ID: 3101377AJP
Reference:
3101377
Name: phosphocarrier protein, Isotype: HPr
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQRTLKIIN EKGLHARASA KLVEVVEGFD ATAEVSRDGL SASGDSIMGL LMLAAARGTT
61 IDVETSGPDA DALADALEAL VNDKFGEGF
SEQDB ID: 3101377AJQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVETAQNSKT GSAAHPSTPP GEIYDRRTLT YANSFDDRWT STWIRAIEWM TGKLTILRMV
61 NRFEKTNDQY RGQKFWGGAL KTMGIDLLTP AEQIARIPKE GPVVVVANHP HGMVDGMILA
121 ELIGRVRQDY RILTRSVLTG LDEAATSFMI PVPFPHDPEA QRKMVEMRAN AMAHLKAGGV
181 VALFPSGVVM SSDSWWGPPI EREWNVFTAQ MIRRSGARVV PIYFPGRNSR AYQIACQVSP
241 ILRQGLLLHE IVRSCKKPQA PVIGAPIPEE DMEMLGRDPR GFMAWLRQHT LSLGG
SEQDB ID: 3101377AJR
Reference:
3101377
Name: 3-hydroxybutyryl-CoA dehydrogenase, Class: EC1.1.1.157
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bhbD
Sequence:
1 MEIQKVGVIG AGQMGNGIAH VMALAGYDVL LTDISQQALD AALSTVRGNL ARQAGRGKIS
61 EADMEAAMAR ISTTLALADL GQTDLVIEAA TEREAVKQAI FEDLQPHLLP HTILTSNTSS
121 ISITRLASRT DRPERFMGFH FMNPVPVMQL VELIRGIATD EATFAACKAV VDKLGKTAAS
181 AEDFPAFIVN RILMPMINEA VYTLYEGVGN VRSIDESMKL GANHPMGPLE LADFIGLDTC
241 LAIMNVLHDG LADTKYRPCP LLTKYVEAGW LGRKTQRGFY DYRGEVPVPT R
SEQDB ID: 3101377AJT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVGAMSYELP GAGAPEAATC RYGLSKLRFR GPVRELNAPY VACIGSTETF GRFVPDPYPA
61 LLEQRLGEAC VNLGSINSGL DAILLDPELA RLAQAAEFCV LQVPGAQNLS NRLYRVHPRR
121 NDRFLEASPM LAALYDEVDF TEFHFNKHLL GRLYEISAER FTVVRAELQQ AWQARMRSAV
181 DVLGSRVVLL WLRYRHQRPD DPAEALGPEP LMVTPKMVAG LASRVRATVE VPVQMAGQSD
241 ELGDMIFGML QEPAAEHSIG PVMHQVIADR LYRALQDIDT
SEQDB ID: 3101377AJU
Reference:
3101377
Name: electron transfer flavoprotein, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: etfA
Sequence:
1 MAVLLLAEVT GGELALDATA KAVSAAKALG DVTVLAAGAS AAAAGEAAAK IDGVSKVLVA
61 EDASLGHRLA EATAALIVGL ADGYEHIVAP ATTDAKNVMP RVAALLDVMV LSDVSGVVDG
121 STFERPIYAG NAVQTVKSKD AKKVITFRTS TFDAAGEGGA APVETISVGD NPGLSEWVED
181 KVAASDRPEL TSAGIVVSGG RGVGSEADFK LIEALADKLG AAVGASRAAV DSGYAPNDWQ
241 VGQTGKVVAP NLYVAVGISG AIQHLAGMKD SKIIVAINKD EEAPIFQVAD FGLVADLFQA
301 VPELTEKLG
SEQDB ID: 3101377AJV
Reference:
3101377
Name: electron transfer flavoprotein, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: etfB
Sequence:
1 MKVLVPVKRV IDYNVKVRVK ADGSGVDLAN VKMSMNPFDE IAVEEAIRLK EAGKAEEIVV
61 VSIGVKQAQE TLRTALAMGA DRAILVVAAD DVHQDIEPLA VAKILAKIVE EEQPGIVLAG
121 KQAIDNDMNA TGQMLSALLG WSQGTFASEL NVEGDHALVT REVDGGLQTI KVKMPAIITV
181 DLRLNEPRYA SLPNIMKAKK KPLDEKTAAD YGVDVSPRLE IVKTEEPPAR AAGIVVGSVD
241 ELVAKLKEAG AV
SEQDB ID: 3101377AJW
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERVDGFGGF FFRAKDPKAL AEWYQQHLGI DPAPGDYSGR CWQQSAGATI FAPFAQDSAY
61 FGDPGKGFML NFRVRDLEAM IAQLRAAGIE VQPDPGSPYP NGSFARLTDP EGNPIELWQP
121 A
SEQDB ID: 3101377AJX
Reference:
3101377
Name: ATP/cob(I)alamin adenosyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVVLNKIYTR TGDKGQTALG NGARVAKYSD RVATYGTTDE LNAFVGVARL EADGDMDAAL
61 SRIQNDLFDL GADLCRPEME KDAEAEYPPL RMIAAQVARL EQEIDAMNSD LDPLRSFILP
121 GGSALAAHLH VCRTVARRAE RLAVELAEGE TVNPQAITYL NRLSDWFFVA ARTANNGGKD
181 DVLWIPGANR
SEQDB ID: 3101377AJY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLLMIVMFM AMGAVVIVLM IGLGGFAKGG TFNAKYGNKM MRLRLLFQFI AVLLILLYVY
61 LRGQGS
SEQDB ID: 3101377AK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSECTRRKAM ASIAPCETPI KAPRLRLFGW ISFLRQPKVS EHATLEAELI RLAETAPHLL
61 ADIGFLVDHR RSTSARTVWV SPGSGLIFEH PGSPAVRRAG
SEQDB ID: 3101377AKA
Reference:
3101377
Name: short-chain oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKTILITGC SSGIGLAAAH GLRAQGWHVF AACRQQRDCD RLRAMGFDSP RIDYDDAESI
61 ASGLAEVLDA TGGTLDALFN NGAFGMPGAV EDVPTEALRA IFETNFFGWH ELTRRVIPVM
121 RAQGHGRIVQ CSSVLGLVAF PWRGAYVATK YALEGLSDTL RLELADTGIH VVLIEPGPIT
181 SKLREKAIPH FERHIDWQGS ALRAKYEGGL LKRLYEDRGP DRFELPPSAV TAKLIHALEA
241 RRPRPRYYVT TPTYIAGILR RILPTRLSDR VLGRI
SEQDB ID: 3101377AKB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHDAAVALGA HHRDHPSGQL VPAKEIGLEN GPQRLGGHIL DRTGHAKGAV VEQRVQGAAG
61 GVQHFGQPRG DRLGIVIVDA RAVEAHGAQP VAIALLAAGG EHMPALRPQA MGRRKSDARR
121 TAGDEDCLCH EFVQRRPGWS LLLGRPSGLG NGSNVSVRLF ADQRRGDPAD LLLGQHPQAQ
181 PAGARIVQHL DLVAQGETAD DGIERAGSVP HVDARSGDLA QVGRRAVIGE GLGLGCRLGF
241 SGLDPQCQNP AFERGEGQSP ALGGIVVEQG QPLVQAGAGA GQALQLFLRG QCRLFDRCRA
301 GRIGGQRHFC DQLCGFDLDQ RFGLGGRLCR DALGLGRTQA ARFEIGAAAE FPEGKAENGE
361 RDDDKAHGAP PVNTRNENRL SETGRRLADQ ILTYPAQGVQ KWGKNSLFSP NLLSPGKLSP
421 ANSPPVALPE TTERVSHHL
SEQDB ID: 3101377AKC
Reference:
3101377
Name: DNA topoisomerase IV, Subunit: A, Class: EC5.99.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: parC
Sequence:
1 MSDTIDDPNM KQDGGGHQVS EPLRRAIGER YLTYALSTIM HRALPDARDG LKPVHRRILY
61 AMRELRLSSS GGFRKSAKIS GDVMGNYHPH GDAAIYDAMA RLAQDFNVRY PLVDGQGNFG
121 NIDGDNPAAS RYTEARMTIV AEALLDGLNE DAVDFRDNYD GTLTEPVVLP AQFPNLLANG
181 SSGIAVGMAT NIPPHNIAEL CDACLHLIKT PDARDDTLLN YVPGPDFPTG GIIVEPPESI
241 AQAYRTGRGS FRLRCKYEVE DLGRGQWQIV VTEIPYQVQK SKLIEKLAEV IQTKKVPILA
301 DVRDESADDI RLILEPRTKN VDPEVLMGML YRNSDLEVRF SLNMNVLIDG VTPKVCSMKE
361 VLRAFLDHRQ EVLLRRSRHR LGKIDHRLEV LEGFIIAFLN LDRVIDIIRY DEDPKAALMR
421 EEWGIDHPRA LNEADYVSPA PGEGELSEVQ AEAILNMRLR SLRRLEEMEL IRERDALMAE
481 RAEIEDLLAD PALQWARISD QLKETKKTFG KDFPGGARRT RFAEAGEVEE VPLEAMIERE
541 PITVVCSQMG WVRAMTGHID LTRELKFKDG DGPRFIFHAE TTDKLLVFAS NGRFYTIGAA
601 NLPGGRGMGE PLRLMVDLPN EAEIVDILIH QPERKLLVAS TAGNGFVVPE TEVVAQTRTG
661 KQVLNVRDDE RALICVPVAG DHVAVVSQNG KFLVFPLDEM PEMGRGKGVR LQKYNMARGK
721 QGALELDGGL SDVTTFTWAE GLKWSMGGDK TRHETDLSQW LAKRASVGKR PPYGFPRSYK
781 FK
SEQDB ID: 3101377AKD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASRAATSSS DTSAALCHFL PMRLGTGRIR RLHPLQPNAC RDAIMIRVLS LLTGLALLAA
61 CTAATPDEPL EDLGAFKLGH NVVVASKAQK GPISRDATAE EWETALKAAV GERFSRYQGD
121 QFYHLGISVE GYMLAPPGVP VIYSPKSALI INVTVWDDAG QSKLNPEVEQ FTVFEATTGE
181 SWLMGSGNAR TREEQLMGLS RNAVGEIEDW LVEQHKENGW FAPRPDAEAT TGTPVKPAQG
SEQDB ID: 3101377AKE
Reference:
3101377
Name: translation elongation factor Tu
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tuf-1
Sequence:
1 MAKEKFERSK PHVNIGTIGH VDHGKTTLTA AITKYFGDFK AYDQIDGAPE EKARGITIST
61 AHVEYETDSR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ
121 VGIPFMVVYM NKVDQVDDEE LLELVEMEIR ELLSSYDYPG DDIPIIRGSA LHAMNGTEPS
181 MGEESIRALM AAVDEYIPTP ARAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDSI
241 EIVGIRDTKT TTCTGVEMFR KLLDRGEAGD NIGALLRGID REGVERGQVL CKPGSVTPHT
301 KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVT LAEGTEMVMP GDNVGFTVEL
361 IAPIAMEDGL RFAIREGGRT VGAGVVSKII E
SEQDB ID: 3101377AKF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLRKKIADS EAVLNWVARR IASYIRLVHR NTSWQRIGYE ELDQLAAAGE PVIVVLWHQR
61 LAQSPYFFPL DKGRICSITS AARAGSMVGR VQQLFGMDTI AMSSHKRHVA LSREVLGKMK
121 DGISIGIAAD GPRGPERVSS TVPLVWARSS GKRVFGITYS VRHGREMGSW DRLLLPRPWR
181 NDGVFLCREW TDPVPRKASE EEFEALRQSL ERHMNEITAE ADLMVGRTPW TGK
SEQDB ID: 3101377AKG
Reference:
3101377
Name: glycerol 3-phosphate regulon repressor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glpR
Sequence:
1 MDAEARQHEI LQKLRQQERV GVDELTLDFG VSSQTVRADL RDLHDRGLLK RTHGGAVRVE
61 TVSNREYGAR RQLHRGQKAA MGALAASLIP DDSSVTLNIG TSTEQVARAL SGHRGLTVLS
121 NNINIINLLI GTPSKELVLV GGAVRQSDGA IVGEDAVEFI SRYKVDFAVI GASAMDADGA
181 ILDFDAREVS VARAILRNAR SRILVCDGSK FDIAAPVRIC DLAELDYVVT DRAPPAEFLR
241 RAEQTETEIL IAEQTDD
SEQDB ID: 3101377AKH
Reference:
3101377
Name: aerobic glycerol 3-phosphate dehydrogenase, Class: EC1.1.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glpD
Sequence:
1 MTETDTRVYD LFVIGGGING CGIARDAAGR GLSVALAEMK DLAWATSSAS TKLFHGGLRY
61 LEYFEFRLVR EALIEREMLL RAMPHISWPM RFVLPYHPDM RFENDTPTSR LLSTVMPWMK
121 GRRPAWLIRL GLFMYDHLGG RKILPGTRTL DLSSDPAGAP LQERFRKAYE YSDCWVEDAR
181 LVVLNARDAA ARGARIMTRT KVVSATRGAD HWTVTLEDTV TGDTRTLCAR VLVNAGGPWV
241 GELIHGALRL NSSEQVRLVR GSHIVTRRLF DHDRCYFFQG TDGRIIFAIP YEGEFTLIGT
301 TDQEHHDPDA HPTCTEGERD YLLRFASEYF KRQLTPEDVV WTYSGVRPLY DDGASSATAA
361 TRDYVLKVDR NGGAPVLNVF GGKITTYRRL AESALDKIAP FFPGLAGKWT AGVALPGGDF
421 PVDGVAALTE GLMRQYPFLT QAWAARLVRA YGTEAAAMLG EAGNAEALGE DFGATITAHE
481 LDWAMSREWV RSAEDFLWRR TKLGLRLTPD QVARIEAYIS ARG
SEQDB ID: 3101377AKJ
Reference:
3101377
Name: esterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLALILALA PLALVLLVLI LGWIRTRMLA RRAATLVPQM GQIQPVSGGA IHYVEAGDPA
61 RQTLVLIHGL AGQLQHFTYA LVDRLSQDHH VIALDRPGCG YSTRDGAALA KLPEQARMIA
121 EFLDTKGIKD PVLVGHSLGG AIALAMALER PRKVAGLALI CPLTHHMAGA PAVFRPLEIR
181 NARLRRLIGR TIAVPLANWT AQQTLREVFA PEDFPEDFLD RAGGALGLRP QAFVTASEDV
241 VGADASIAAQ AQRYRDLEVP GAILFGAEDA VLLPTQHGVP MKKFGLRCEL LPGRGHMLPI
301 TAPEECEEFI RGVSISTRVP ATLRS
SEQDB ID: 3101377AKK
Reference:
3101377
Name: PaaX domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRHTPWFDT AVTRLADPQN QRVWSIIVSL LGDLARRKGD RISGSALTRI TQPMGIKPEA
61 MRVALHRLRK DGWIESSREG RSSVHYLSEY GRTQSDRVTP RIYTRTPELP EAWHILIAED
121 GSSLNTLNDL LLTDTYIGIG RTVALGSGPV PGDCDDLAGF EVSARAIPGW LQTRLFPEDL
181 GTACQSLHQD CAELRAAGVP GLLTPFQVAT LRTLLVHRWR RVALRHPDLP AAFQPRGWMG
241 PACREQVFAL LDALPLPPLP ALNEAE
SEQDB ID: 3101377AKL
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaZ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaZ
Sequence:
1 MALQQISSFA AGQWVAPGAG ARTIASAITG APIASAGNDA LDVLAMLDHA RNTGGPALRK
61 LGFHDRARMI KALGQALNAR KAELYAASFD TGATQSDHLI DIDGGIGTMF VFASKGRREM
121 PDGQIYLDGE VEQLSRNGTF LGQHVCTPLQ GVAVHINAFN FPVWGMLEKL APTLLAGVPS
181 IVKPATNSCY VTELAVRIML EAEILPAGAL QLVSGGLGDM LDHLDCQDVV SFTGSADTAL
241 KLRSNPVILQ NSVRFVAEQD SLNASILGPD AEPGTPEFDL FIKEVAREMT TKAGQKCTAI
301 RRIIAPQPRV EAVIEALSAR LSKTVIGDPR DEATRMGALV SGGQKADVLA KAAIIGQEAE
361 QVFTMDPGLS GDLANGAFVP PMLFHCADPD RAQRVHDTEA FGPVSTVMGY RDVDHAVTLA
421 NRGGGSLVTS LITHDADVAR DVVMGAGAFH GRIYINNRDS MKESTGHGSP LPHMVHGGPG
481 RAGGGEEMGG VRGVKHYMQR TAVQGSPEML ARIGGKWVPG ANEVAGPAHP FTRRYNELSI
541 GETLNTAART VTMDDIEHFA HFTGDTFYAH MDDAAAKRNP FFPGRVAHGY LLLSFAAGLF
601 VEPNEGPVLA NTGLDGLRFM KPVSAGDSIK VRLTVKKKTR RTEDYGEVRW HVTLTNQDDE
661 MVAEYELLTM NAY
SEQDB ID: 3101377AKM
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAALIGFAL VLVLVLLRLP IVFAMGLVGT LGFAYERGGS ILDERGLKAA MSMVGRQVMD
61 TAQDYGLSVV PLFILMGLFV NKGGMARELY AVSNAFLGHF RGGIAMATVA ACGGFSAICG
121 SSLATAATMS KVAMPEMRRY GYTDELSTAS IAAGGTLGIL IPPSVILVIY GLLTETSIGK
181 LFMAGIIPGI LGILFYLFAV RWTVWRNPEA GPAGERAGWG ERVRALGSVW AVLLLFFLVI
241 GGLYGAFDFH PLNLTFSPTE AAGMGAAGAF LIALFRGGLT VGSTFEVLKE TSFTAASLFS
301 VLIGAQVFSN FINLAGLPEA LIAMVTAYDV APFVVILMIL GIYIILGCVF ESLSMLLLTV
361 PIFFPLVTSL GYDPIWFGIV VVVVTEISLI TPPVGLNVFI LKGVVGDVST GTIFRGVTPF
421 WIADIFRLAL IVLVPVVVLY LPQQMGAMGH
SEQDB ID: 3101377AKN
Reference:
3101377
Name: TRAP dicarboxylate transporter family protein, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSLIRLARH ASFAPVLVAC LALFILMVMT FCDVILRSVL NAPIEAATEL TRILMAVLVF
61 SVLPIISVNN GQIAVDLTDG LFHRLRLDRI RDGLIHLVSG IMLYWPMSRV WILAERSRDY
121 GDVTEYLAIP TYIVGWFIAI SVGISAVALV ITGLLHLFAP RLLSEALK
SEQDB ID: 3101377AKP
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLTKLSTLL ASAAMAVSGT IAMAADYTLT ISSWAPPTHG INAMMWPKFV EMVEEATDGQ
61 VTAELKLGIA PPPAQMDLIQ DGAADLSIIF HGYQPGRFVT TKLIELPGYE GSAEAASVAY
121 WRAYDQYLSK ADEHRGVKLI ALHTHGPAQL HSTAPVTDMA QIAGLKVRIP GGVGGDVGTA
181 LGATGIQVPA PKVYETLASK AADGVVMPFE SRKGFKLTEV AQNVYEMPGG LYRGSFAFIM
241 NEDSFADLPE DIQQALEDKV FGEPLSREIG KIWDEIDAIG RTETEATEGN AINAASAADL
301 EKFAAIAADV REKVIAEVAA AGIDAQAAYD LIKSEMAAN
SEQDB ID: 3101377AKQ
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGENQVVTVR RDGDIAWVEI DSPPVNATST PVRAGLARAV AEVQGARVAI LTCAGRTFVA
61 GGDMTEFDRP AEEPHLPDVV QMIEDSETPF VAAMHGTVLG GGFEIALACA WRIAAPGTKF
121 GLPEVNVGLI PGAGGTQRAP RLIGMMAAID MACSGKMLDA AQMLALGGLD QVAEGDLRAA
181 AQGFAKGLPP RPEKTRLRQV QALNSEALAE AKRALSKAAK GRAAPLHNLD ALQWAALPFD
241 QGQPRERALH LGLRQSDESR ALRYAFFAER LVARPDAIAG VTPRELTRVA IVGGGLMGAG
301 VAMACLGGGL SVTVIERDAA AAQAAQERVA GLVAAGVKRG KISPDAQADM LARLATTDTY
361 ADASDADLAI EAVFEDLDVK RIVFADLAAV MRPDAILATN TSYLDPQLVF AGIANPARCL
421 GLHFFSPAHV MKLLEIVKTP DTAPEVLATG FALGKRLRKI SVLSGICDGF IGNRMLAAYR
481 REAEYLLADG ALPHEVDAAM RAQGLPMGPF ELQDLTGLQI AWANRKRQAA TRDPAERYER
541 IADMLCEMDR LGQRSGKGWY RYAEGSRSPE RDPEVETLIV DYSAKRGITR RPFSAEEIAQ
601 RLLAVLANEG ARIVSEGIAE RAEDVDMVQL HGYGFPRHRG GPMHLAQSQG WEKSMEIMEL
661 VASESPDSWV LAPRGDPSAE I
SEQDB ID: 3101377AKR
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase, Isotype: PaaB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaB
Sequence:
1 MSDTILAQDH GNWVEITLNR PDRLNSFTDE MHLALRAALE GARDNGARAV LLTGAGRGFC
61 AGQDLGDRDP SKMDGPPDLG YTVRTFYAPL VRLIRSLDFP VICAVNGVAA GAGVNIALAC
121 DIVLAGESAK FIQSFAKVGL IPDTGGSWHL PRLLGEARAK GLALTAQPLP AKQAEDWGLI
181 WKALPDDQLM TEARAMAEQF ANGPTLGFGL TKRCIQAACV DTLEDHLELE ADAMKTCGES
241 ADYAEGVSAF LEKRAPRFQG K
SEQDB ID: 3101377AKT
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaD
Sequence:
1 MTPKERAERS AAAMWSDDNA SKWAGMEITR VDEGLAVLEL TVAAHHCNGH GICHGGVTFM
61 LADSAFAFAC NSRNQSTVAQ HNVISYIAPG HLGDRLTATA TEVSLTGRSG IYDVKVTNQD
121 GRTIAEFRGM SRAIKGHLFD ED
SEQDB ID: 3101377AKU
Reference:
3101377
Name: phenylacetate-CoA ligase, Class: EC6.2.1.30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaF
Sequence:
1 MKDLSPKKED LDPIEIASID EIRALQLDRL KWSLRHAYDN VPMYKKRFDE AGVHPDDLQT
61 LADLAKFPFT YKNDLRDNYP FGLFAVPREQ IIRLHASSGT TGKPTVVGYT ANDISNWADL
121 VARSLRAAGL RKGDMIHNAY GYGLFTGGLG AHYGIERLGA TVVPMSGGQT EKQVGLITDF
181 KPTGIMVTPS YMLNILEQYH KVGMDPRESS LQVGVFGAEP WTDAMRREVE EAFDMHAVDI
241 YGLSEIMGPG VANECVETKD GPVIWEDHFL PEIIDPATGE VLPDGEMGEL VFTTLTKEGL
301 PMVRYRTRDL TRLLPGTARS MRRMEKITGR SDDMIILRGV NVFPSQVEEQ VMATGGLAPH
361 YQIELYKAGR MDAMRVFVEA LPTMTDELSK TAAARMLTKR IKDIVGVSTE IVVGNPGDVE
421 RSQGKAKRVV DNRDKE
SEQDB ID: 3101377AKV
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARTIAKDHD QKRAQILKSA ARVFAREGFD RASMTQLARE CGISKANIYH YYDSKDAILF
61 DILETYLHEL RDRICGIDIA GLSGPERLHT VVREILLAYQ GVDDEHRVQT SGMSALPDEQ
121 QKQLRGYQRD MIGFLSNILN GIAPETFAGN PGKLRGATMS VFGMLNWYYM WNSGADTAAR
181 EEYARMVSDL TLHGLKGL
SEQDB ID: 3101377AKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTQGNFDVL PVGDGAKRAQ TVQPTVKLRI ETIGVPRISD ENGRNLTPVG SRNRVIPVIL
61 ALSPRMTVGR RWLEALLWSD RGPDQASGSL RQALSSIRRQ LGDARDILCA NRTDIWMTSK
121 DVTIDLLDDQ QGVLQRLRAG RDFLEGIDIL SEGFEDWLRQ ERASLLQMAE VELPARALPA
181 RLHATEAERP LSWTQEPPRF FLDQDLGLES DKLERFLTDA ISTQLTQTVK SHFRADVRAL
241 DGTLTPVIVT PGARFAIRVT RINKAFAVLA RMTEEPAGRL FWSRQLFIDS RETESMMDTA
301 AALATEASEA MGARSFVASP AQQANVLAAE ALADVFSFDP DRLRKAIRTL GRANDIDPHA
361 PRPALKALAL AFLALETRNT DRDHLIGEVT DLIRQSRALD SRNALALSFL ADVQDLVFED
421 PQTALSYAKS ALRSNPGIGY AYASLGALEL RRGAAEAALI AASRAQRQLA NSSLEVFSLM
481 RLCVANLTAK DFDAAEQAAQ RAAELAPTSQ PPLRHLYALR LRRKDYAAAR QTLRALRRLD
541 PLFSMQYLRE NPEFPAATIR TMQLHKLMDV ELG
SEQDB ID: 3101377AKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRSGPMPWT NGPDGPGGIA MTYTWTNWDK PKDDIDPYIH WATVGPGEDQ IKREDESDLR
61 DGDNVLKFIP QRFLPDDTWY HFKHLDQIVV PTLALNPDGD VGVKQPEQAN LPSGEDGTLS
121 TVIDPKTIIA GVIDVGMPLG HRRLRFADGK TRILSAWQMI GNWSLNPARF PDVPFGCAFY
181 EHEINEHLQD FSGGTFKGRL DEEAFHKRLG ALNLSQVSRQ TSLAQRASHG AHVLDMVAGA
241 DPGATDNFDE RVRIIAVNAP SSAVFGASGT YLDSYMLHAI QHVADVADGI WKKMKDAGAD
301 VPEGGFPIVI NLSFGKHAGY KDIHDRFAAA LDQFQDIRVK KQRKARIGIV MPTGNDNLAR
361 CNAFLEPMRG QPKALNWRVL PQDQSSNFTE VWFEQVDRQK DELTPAIRLS FNAPGATVPT
421 PQPPKLTKGE TQFCALQRDG VTVAHLYVAW AVPEDHVREG KIRRTERNRF RYILCVAPTY
481 RLDGDPSVAD SGVWRISLQT RRREGHFVTL SIQTDQGLTP NRVINLRSYF DDPGYVTNDS
541 DGRPLESYSY PRNADGVYIN NDILAVTPVR RHGTMNASAA HKGAARVGGY RASDGRPSFY
601 SSTGRGRRDG KDAGTTLPRP QGTKTKRAPT AAFPTDDGPA HGGILSAGST DGSQVVMRGT
661 SFAASQASRR LICAINDGTA QTTASETLWL IARSSELNRH VPEILGYDTE LIEVIGAGRI
721 PSPRTAGQRR VRLGPFDT
SEQDB ID: 3101377AKY
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNSESPRRLF AFSPLSGQFK KYFSNIGLAP RAGYPGHSWP DSRGNCGRIA IGWNIDVMPG
61 AGWPCRTCKL KKKCAPRDGA PKRKERQMAL IGGTHGGTHG GTHGGTHGGT HGGTHGGTHG
121 GTHAGGGTSP LVSSALMVQQ DAITGFWDVE GTDLNAPNCN GVGDDLKYLS DLRRQQILTG
181 ELLSNFRVEA DGGNGARVEL CGEPVATLKI PTYAAGNGLR PQMQLLRGYS DLRADRIPEI
241 YRQMDDIISF FEAAHHMNLN RREATLHVLS AVHSVVISLS MQAKHHTWMP RPSEYAAQVQ
301 PIIPTPDHSS YPSGHATEAF ALATVLHRLM TGQKLGQAMT EPDLPMVFRI AHRIAVNRTV
361 AGVHFPVDSA AGACLGAALG EAICDMAAAG HGTALTPGAL EFEPDAAATS DFAPERDFDL
421 VWIKASLHPT PASDEVENPR IKLFAALWAD AVDEWA
SEQDB ID: 3101377AL
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPPLNALR AFEAAARHNG YIAAAEELCV TRGAVSRHIK LLEDHLGVTL FHRNHRGVEL
61 TAAGRQLLPV LTETFARIAR EAEQISAMTR DVRIICPPAL SIRWLFPRLE EFQAAHPDIR
121 VRLTTEFYGA KGFDDTEHDL GVSVEHVSGR GAGIASMPLF PMVLSPACSP ALLRQRPLSA
181 PADLARMTLL HESPQRRDWA HWLSSFGVRG VDAGSGPTFP NLDMAARAAT MGAGVVMADL
241 ALCQEELRAG TLVLPFPEMT CTTPQGGYVL LGARARWDEP HLRAFRDWAA SSSADLVACM
301 GA
SEQDB ID: 3101377ALA
Reference:
3101377
Name: peroxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYCQPDHGGP AGPYGNIYRS TMSACRSFDY FFPDAPVQVA DPARVKALDA LGLAMVKRDP
61 VAGANSALAP VLTYFGQFID HDITAGTDRD GANEMIDAPD LAPRSREAVR TEKQNMRSGR
121 LDLDSLYGGL PDGVPQNPAD KAFLDKLVSA MRSKTFRGQM RIDVYSEDTP DSAVPFPTTD
181 RAGDLLRLGA LERDKLVTED EILGLSDGMR KMFTRKDGKT LNPTRAIIGD ARNDENLIIA
241 QFHLVFLRLH NRLVQNRPGH VKASKAFDWA RDRTRWIYQW LVVNEYLRKI CQEDILDDIL
301 AAGPGLYQNF LANSGCTDGK LPLPIEFSAA AFRFGHSMVR DAYDWNTFFG TKTTHDPTLP
361 EAGSQLLFAF TGGGEMNGFP VDRLPGNWGA DWQRLIFAGA GATPTEFARK IDTHLALELG
421 ALPGGTAGTI MAHLARRNLR RGHMLNLPSA QDCAGELGLV PLGTAELGEG EIAQVLSQGG
481 LSEATPLWYY VLREAEVRNS GEALGPLGTN LVAQTLLGLV QSDPGSYWHQ TGTGGARWTP
541 ADLVADGLPD LSSIEAVMRF GGHLR
SEQDB ID: 3101377ALB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVRLRDRTA AGAASAPAAP QPKKETTMKH IHAAALCGAL FLAVGCAQQA PLNSAALSPG
61 NLASGMPYYL PKSFLRVTFE RAKLLDATIV VENRPDLSRA FVARAGYSAF SNDLYTIETT
121 ADGLLASVKV DTDEQSDEIV KAATSRVTAI LSGEDAEISL RDASTDAFSI MINPFASEYR
181 GSGKSLGNGM TLSTSYDASV LEGPTTPCPA AAAVCVPLLV PVTITIKDDK AKFEHIATVA
241 HPRHVMGIRI DRRPCVRSIA TLTFKAGMIS KFDVEKPSEV AACLSIPLDV ISAIIAAPVN
301 ALSGRSARLR AQKGVLEQQK ALLEAQQALI DAQIAAAQSN
SEQDB ID: 3101377ALC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWTHGPFTS VPYSNLCRIT RHTSFWRNKT MANSIKFLRT FAEWGDQVRP FERSDDVLRI
61 LQDLTNDFGQ TFGAYVGGKF TSVWLHEGDA PGSKEDLDLI FVNQSDGFLD IVLRREGVPA
121 DGGFLSPSAS VQVLDEIVDG LRVIVGTDEA GNKTRYEAIG GQYNAVGPAA TLAVTNPARA
181 RKRRVRTSA
SEQDB ID: 3101377ALD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSNRELLQK LLKGIETGDP AAAAVVNEEK YIQHYPQTHE GSEGLAVLFA RLAKTNPRVR
61 FVRVFEDGDF AFAHNEYDFA SLRVAFEVFR FENGRAVEHW DNIQPMLGPN PSGRGMLDGV
121 TQITDLERTE ANRALVRDFA QRVLVGRQLD FLGSCVDDGL IQHDPEIADG RAAYRAALEA
181 VTNGQPRLHY TRLHRVLAEG NFVLCMCEGE RDGVHSSFYD LFRVENDTII EHWNTIEAIA
241 PRNEWKNENG KF
SEQDB ID: 3101377ALE
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEAAAALNNW MMTTGRRSGD PVGIVSHLCA SLVDAGVPLW RVNIGQRFAN PLLIAWGVVW
61 TPDGTEVYDV THARMLTDGY IGSAFEYILE NQRPLHKSLR GLDPARDHAS YLEFAAEGGT
121 DYYATLLDYG DGSQHGCTFA TRAEDGFSPK HLALIEAIKP GLSSAMEPIT MRKSTQSLLR
181 TYLGDGPSSA VWNGAIKRSE RSTLEAVIMF SDLRGFTAFS DTQSEQEVFD ALDGYFEVVV
241 QSVEGNGGDV LKFMGDGVLS VFPISGRADK AARCRQSALA AQAVLAGLAT LNEHRAAQGK
301 TRLDIGIGLN AGQVSYGNIG SQGRLDFTVL GGAVNVASRV EGLTKTIGAP VLATASVAQH
361 APDLFASHGR HEVRGLVDTV EIFGLVETSP
SEQDB ID: 3101377ALF
Reference:
3101377
Name: phenylacetic acid degradation protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEDMTIDSY LAAGGMLTNP TNVPARYRAE LMKLMATFVD SELAGAAGFA EIINQGPGIK
61 ERIAAAKIVL EKTDNADRVL RIMGEFGADT QRYATHHPWT ARLERDADIG AARTERDMRL
121 AVFNYPIEGW ADAVMMNLLM ARAVVVQLAD FTMISYQPLA EAFRAIAPIE TRHGELALEG
181 AAKLVEDGEV EALQASAAYW WPRVAASFGT GSAGRTEALR AMGLRRTGNA EMRTRWEAEA
241 ANLLDSLGLK RP
SEQDB ID: 3101377ALG
Reference:
3101377
Name: phenylacetic acid degradation oxidoreductase, Isotype: PaaK
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaK
Sequence:
1 MARFHDLEVT DIHKTIRDAV VVTLKPANGA ASEFDFTQGQ YLTFRRAFEG EELRRSYSIC
61 SGKDDGVLQI GIKRVDGGAF STWANEELKV GDTVQAMPPM GGFHTPLDPG AEKQYLGFAG
121 GSGITPVLSI IKTTLAREPR SQFTLVYANK GVNTIMFREE LEDLKNLYMG RFNVLHILET
181 DAQEIELFTG LVTEEKCGQL FEHWIDIQHV DTAFICGPEP MMLGIAAALR AHGLSDAQIK
241 FELFASAQPG RAKRKAVSSE AAKGANQTRA AITLDGATQS FDMPKDLSIL DAALQNSLDA
301 PFACKAGVCS TCRCRVLEGE VEMVANHALE DYEVEKGYVL SCQAYPLTDT VVVDYDQ
SEQDB ID: 3101377ALH
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaJ
Sequence:
1 MDQPSQQQVW DWLDTVPDPE IPVISVVDLG IVRDVAWEGE TLTVTVTPTY SGCPATAIIS
61 MDIETALRNR GVKDIRIKTQ ISPAWTTDWL SEKGKVKLEE YGIAPPRPAG GPERCPRCGS
121 KAVEKVSQFG STPCKAHWRC TDCLEPFDYF KCI
SEQDB ID: 3101377ALJ
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaI
Sequence:
1 MTRDQAFLQF LLRMGDNTLI LGHRVSEWCG HAPVLEEDIA LANTALDLIG QTQMWLALAS
61 EVQGEGKSAD DLAFLRDAWD FRNALLVEVP NGDFGRTLMR QFLFDSWHKL MLERLKGSAD
121 ERVAAIAEKA MKEVTYHVER SRDTVIGLGD GTEESHARMQ EALDYLWPYV GELFEGDAVD
181 AEMVAAGIAP DPASLRADYD AILTEVMKAA TLSIPKSGFA HKGGRDGRMH TEHLGHLLTS
241 MQWLQRAYPG ARW
SEQDB ID: 3101377ALK
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaH
Sequence:
1 MKNEWPLWEI FIRGQHGMSH RHVGSLHAPD AAMAIKNARD VYTRRNEGVS IWVVEAQHVA
61 ASSPSDKGPL YEPSESKVYR HPTFFDIPEE VGAM
SEQDB ID: 3101377ALL
Reference:
3101377
Name: phenylacetic acid degradation protein, Isotype: PaaG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: paaG
Sequence:
1 MYAQMIKTAS DGVKSREDMS DEERAFQDKI DNDIKIEPKD WMPDDYRRTL IRQIGQHAHS
61 EVVGQLPEGN WITRAPTLER KAILLAKVQD EAGHGLYLYS AAETLGESRD DLINLLHEGR
121 MKYSSIFNYP TLNWADIGAV GWLVDGAAII NQVALQRTSY GPYSRAMIRI CKEESFHARQ
181 GYHAIMAMAF GTPEQKKMAQ DAVNRLWFPA LMMFGPSDKD SIHSEQSMAW KIKVKTNDEL
241 RQQFVDQTVP QILYLGLELP DPNITWNEAR GHYDFSDPDW SEFFNVIKGN GPCNTDRLAA
301 RRKAWDDGQW VRDGLLAHSR KKAAARMAAE
SEQDB ID: 3101377ALM
Reference:
3101377
Name: beta-ketoadipyl-CoA thiolase, Class: EC2.3.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDAFICDAQR TPIGRYGGAL SQVRTDDLAA VPLAALVARN PQVDWASLDD VIYGDANQAG
61 ESNRNVARMA ALLAGLPVDV PGTTVNRLCA SGMDAVGMAA RAIKAGDYDM AIAGGVESMS
121 RAPFVMPKAT SAFTRANAVY DTTIGWRFVN KKMHEMYGTD SMPQTADNVA EDYDISRADQ
181 DAFAARSQAR WAAAHAAGVF GDEITPVTIP QRKGDAIVVD TDEHPRPGTT AEQLGKLKGV
241 NGPDKSVTAG NASGVNDGAA AILMASEAAA VKNGLTPIAR VVGMSVAGVE PRVMGIGPVP
301 ASRKVLARAG LTIGQMDVIE LNEAFASQGL ATLRALGVAD DAPHVNPNGG AIAIGHPLGM
361 SGARLVMTAA YQLKRTGGRY ALCTMCVGVG QGAALILERV
SEQDB ID: 3101377ALN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHLPHSGYEL RDMVSRGWLA YRADQFSLPR YRDCVMAQST LHFRSLVTLP HALADILAGI
61 FDALVRVGEA NAKIRQINAL SALSDAELAE RGLRRADIIR RVLSDRV
SEQDB ID: 3101377ALP
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATVPLLSDE EASAQALAVF DDIRATRGTD YVNNFWRALA HDPALLQATW ERLKVVMGPG
61 TLDPLVKELI YVAVSTANGC AYCVHSHTAA ARAKGMTQAQ YGELLAVIGM AMQTNGMVTG
121 MQVPVDEAFK A
SEQDB ID: 3101377ALQ
Reference:
3101377
Name: cyclase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCDICVMNAV KDRMLSRRDL FRTGAVVAAG AALGSVAAPP AMAAGIGEVR DMTHVYDADF
61 PTYFGAPGIE AVQNFNFKEH GFNLFTLTLN EHTGTHVDAP LHFSADGQSV DEIPVGNLVC
121 PLCVVHIHEK AAADADAQVT PDDLKAWISA HGPIPDGACV AMHSGWAGKT GGAGYRNADS
181 EGKMHFPGFH VEAAQMLIEE TGAVAMAVDT LSLDHGPSAD FATHYAWLPT NRYGIENLAN
241 LDKVPASGAT LIVGAPNHRG GSGGPARIFA MV
SEQDB ID: 3101377ALR
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGQTEQVLN GVLEDIEHGR LGPGDLLEEA ALTERHGVSR TPVREALIQL ETQGLIRRLP
61 RKGAVVFKPT LEEFLAILEV HARLEGQAAG LAARRMNATQ AAELEAVVAA CEAHARDKGD
121 GDPFGYYRLN LRFHETVALG AGNPYLVEMI KTHARKLLAY YRARYSYPGS IPASAREHRQ
181 IATLIFDRRR EEAEAAMIRH VQFDQVTVMD LLAALG
SEQDB ID: 3101377ALT
Reference:
3101377
Name: Gln amidotransferase, Isotype: class I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHLAILMTNT DESDFAQRHP KDDQKFAELI GLARPGWTTS AFVVKDGHFP TTLDGIDGAM
61 ITGSPASTLD DAPWIAQLLQ LIRDMHARRL PVFGACFGHQ AIALALGGTI GRNPGGWVHG
121 LTRNRMLDRP DWTRDLPDEV RLYGCHMEQV TALPKGARAI AEGPDCPVTG FVLGQHIYTT
181 QHHPEMTHDF VEALTEEMAE ELGEAACASA LASLSERSDM AAFAESVARF FEQAHQR
SEQDB ID: 3101377ALU
Reference:
3101377
Name: cytochrome P450 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVWTPTDDG YADLTSHDAF AGGAPHNTFA RLRREDPLHW TEYADGQDFW SVTRHADIAE
61 MNRNTAVFSS ARGIRMEDQS YEEYLARRTF QETDPPEHSQ TRMLLMKAFS RTTMAQYEDD
121 IRAICVDILD EVLDKGTFDA TKEIARQLPM RMLGRIVGLP DADLPWLVEK GDALIANTDP
181 DFTTHVLDKL DTDEYRMMPF NSPAGAELYL YAKDLMEQKD KAGDTSGVLH MILQPSKDGS
241 VISDTEFRNF FCLVVAAGND TTRYSIAAGI QAMCHQPELL EQMRAGGDIW ETAPDEIIRW
301 ATPALYFRRT ALQDHEMHGK TIRAGDKVLY WWSSANRDET VFDDPFRVDL FRNPNRHLSF
361 GQGGPHVCLG MWLARLEVKV LFQELAKRLS SIEPAGPHRF LRSNFVGGIK ELPVTVRRA
SEQDB ID: 3101377ALV
Reference:
3101377
Name: Gln synthetase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDRLRAMFC DHLSVMRGKY LPNSKIADSS TRFCRSTFGV HYDRDLLDAP GAMMKQGLPD
61 MELKWVHDDI RDSWHSGTKV VLGDLYDDHD QPLPLCPRGA LKRAVAAWQA HGLSPKVGIE
121 LECFALQADD NGRLVPYDAP GGVVYGTGPF ADPLRFNDRI WAMAEEMGFS LDMITAEFDS
181 PQFEYTLTFD DALKAVDDIV LFRLMAREIA LEYGIVLTFM PKPIAEAGGS GMHINFSFQD
241 ETGANALSSG PRGGPEHMND LARGCLAGLL HHHKGLAGLI APTANSYMRL QPGSLSGYWQ
301 NWGGDHRNVT TRISSEGGAK ARLEHRMADA SANPYTAVAA VLQAARLGVE NGHTLPPMET
361 GDGFDQTDAK EGTAIDLAGA VRDLERDSVL TEAVGAELVA NHVFMKQKEV RKTRDLEGDA
421 LRDFYVYFI
SEQDB ID: 3101377ALW
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVTWKLADG REIAAEVAPG LSLMEAALAN NVPGVIGECG GCLSCATCHV VVDAAWSERT
61 GAPGEFEDAM LDITAAERQP RSRLSCQIEA HPDLDGLVLH VPEA
SEQDB ID: 3101377ALX
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPETKSVAAE CLGVKVPASR FLNETRIERI NAARYEGQEI AGALHVTGPK DVVLEIGAGL
61 GIVGAVVAKN AKPKSVTSFE ANPELVPEIE ALYALNRLGK KISLRNQILI SAPDRPESMP
121 FHIRSSYLGS SLLNPTERPS TVVDVPTADF AEVCAETGAT VLIMDIEGGE LELLRHADLS
181 QFRAVVLEFH PEAYEIAGMR ECKGILNAAG FEKVNEKSTR TVWTCLRPDS
SEQDB ID: 3101377ALY
Reference:
3101377
Name: transcriptional regulator, Isotype: IclR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTVSKALSL LALFNHGRLE MGLSELTRLS GMNKATVYRM MTELQAAGFV EQMNGDRAYR
61 LGPEVLRLAA LREAAVPLLS VSRDVLRRLC DETGETSHMS IQRNGQLTTL THAYSSHHGT
121 RVAMEDAEIL SLHATGSGLA FLAFSSEEVV EHALSAPLIK HTPQTETDPA RLRQALAEAQ
181 QSGVAESVGG FEADVHSHAA PIFGADQRPI GALAVAAPVS RMTAELKSRV RAALKEAALD
241 LTQRTGGFCP PGYPGAA
SEQDB ID: 3101377AM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSPFDYFVV FAEMRTGSNF LEANLNALDG VACVGEAFNP HFIGYPNKTE ILEVSQDMRD
61 ADPQCLIDAV RDARGVLAGF RFFHDHDPRV LDLVLSDPRC AKIILTRNPL DSYVSWKIAK
121 ETGQWKLTNI KRRKEAQARF DAEEFARHVE ALQDFQVFLL NSLQRSGQTP FYVAYEDLQD
181 LSVMNGLAQW LGVSARLEQL DDSLKRQNPS PVTSKVVNAG EMVEALSGLD RFNLTRTPNF
241 EPRRGPAVPT YVTGAVTPLI YLPVRGGPED EVRRWMADLD GVVDAALGTG LNQKQVRGWL
301 KGNEGHRAFT VLRHPLARAH SAFCHRILNK GPGCFTKIRN TLRRQFSLPI PEGTPGLDYG
361 RADHRAAFEA FLEFVRMNLA GQTAIRIDGS WCSQAQALSS FAEFVSPDLI LREDEIATDL
421 PSLARRFGHA EPPEPPRAAP DTPIPLSDIY DDALEALAAD VYQRDYIVFG FGKWAGGQA
SEQDB ID: 3101377AMA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDGSLACQS VFKPQVQIMN QSCGRVPNRE DNMTIKTKIA GAFATAAIAL TAGMAVAEYP
61 EKPVNFIVPW PPGDLEDVLT RMIADDFQEK YGVAAAVVNK PGGGGGPFPG AIEVANAPAD
121 GYTIGSFVIG VPVMGHQIDI APLTPAKFDP LGIFLTYPFV IATSGDAPYS SMAELAEYAK
181 SNEVALGHFG DVLTPTQVTK AFAKNAGFEW GSDAAFDALD CNTLASGDAD VINTTLQLIL
241 PCLDSVKVLT SITDQRIPLV PDAPAIGELD ADLNIALWNG LFVTKDTPQD VRDKIIAVAK
301 ESMMSERAQA VAKETGALVY WQDAGDSAAR IENDIATMAR IGGLLE
SEQDB ID: 3101377AMB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRPLSLPEP CHMPTERERR FVGPRRAQLI FALFFVVVSI LLLSQIGSQT KWVEKSKLFA
61 QPRFWPAVGL GGMAVLGTMH LYLLPWRKVT RYDWWELRKW TQVLEFALWF LAYVLLVPMI
121 GYLPVTLVFV PLLAWRMGYR DRRMLGLSVL FAVAVVVLFK GLLGVKIPGG AIYEYLPGAL
181 RSFFILYL
SEQDB ID: 3101377AMC
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLLLSALDI LMRWDVALAL LTGSVGGVLI GAIPGVGPAV AIAILLPATF SMDPIVGLTV
61 LLGIYGSSMY GGAIPAILIN TPGTAVNALT TYDGYPMTAR GEPRRALSLA YSASFFGGIF
121 SVICLILFAP VLARVAPYFG SREIFLAALL GIILMVVAHR GQTLIAGALA AFGIFIQTIG
181 LEPVKYTSRY TFDQPFLSGG INLIVVVLGL FALSQAFVLL TSEDEKIRMT RLRGGMFQGL
241 RELARHPRVA TVSASFGVVM GMIPGVGEFT AQFMSYTYAQ RSSKRPQDFG NGSSEGLIAA
301 ETANNAVPAA AMVPLLALGI PGEALTAMML SVFYVHNVVP GPGLFQNQMD FVVALYLSLL
361 ILNVLVLVFL LFATRSLIQV VRIPNRFLGV CILTLSFVGV YSLRNSATDC VMAALFGVLG
421 YVLKRLSMPS VPIILGMVLG GIMEVKLRAG MARVKEPLDF IDRPVAFLLF LAIVLVLIGH
481 FRRVLRERAE IKAAERGALK SGHRFGQMLG RRRGRFVKDR FKLVRARHAK RLRALKDLF
SEQDB ID: 3101377AMD
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEAIGYERV GDIVILAADN PPVNALGHAV RQGLAVGLDR AEAEGARGVL IYGTGRTFFA
61 GADIREFGKP PKEPHLPELC NRIEASPLLV VSALHGTALG GGLEVALATH YRIAVPQAKV
121 GLPEVHLGIL PGAGGTQRLP RVAGVEAALD MITTGRHVRA DEALRLGVID RVAEGEPREI
181 GLSYLRELLD EGAPRRPVGE MPAPAPVDFD AIYAAVLRKG RGQLSPATAV RAVQAACEAE
241 SFAAGLKRER ELFMELMNSD QREGLIHAFF ADRAVGKLPE LEGVAPRPLA AIGVIGGGTM
301 GAGIATAALL SGLSVTMLEM TPEAAEAAKG RIEGNLSGAL KRGKLTAQQF DNLTTKALTL
361 AIDYDALADA DLVIEAVFED MEVKKQVFTK LDAVCKPGAV LASNTSYLDI NQIAAVTSRP
421 QDVLGLHFFS PAHVMKLLEV VIADQTAPDV AATGFALGKR LGKVSVRAGV CDGFIGNRIL
481 SVYRTCADHM ILDGASPYQI DEALEEFGFA MGPFAVADLA GLDIGWAVRK RKRAEGLDPR
541 ARDSAYADKL CEAGHFGQKT GKGYYDYAAG AKARVPNPEV LPLIEAERAQ QGITPRAFSK
601 DEIVRRYMAA MVNEAAKVVG EGIARRPLDV DVTLLYGYGF PRYRGGPLKW ADMQGLPELL
661 ADIKRWAAED AYFWQPAPLL EQLVAEGRTF DDLNKEAV
SEQDB ID: 3101377AME
Reference:
3101377
Name: Ac-CoA acyltransferase/thiolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQAVIVSTA RTGLAKSFRG SFNVTHGATM GGHAVQAAVA RAGLDGSEIE DCIIGCGFPE
61 GETGSNIGRQ IAIRAGLPVT ASGMTVNRFC SSGLQTVALA AQAITEGGSG PMVAGGVESI
121 SMVQPKARPA PEAWIQEHKP AIYMAMIETA DIVAQRYGLS RAYQDEYSLR SQQRIAAAQA
181 EGKFADEIVP MQTKMAVKDK ESGEVSMHEV TVDRDECNRP STTLEGLAGL EPVRGAGNFV
241 TAGNASQLSD GAAALVLMEA AEAERRGLEP LGAFKGFCVA GCEPDEMGIG PVFAVPRLLE
301 RHGLKVDDID LWELNEAFAS QCLYSRDRLG IDPEKYNVNG GSIAIGHPFG MTGARMTGHL
361 MLEGKRRGAK LGVVSMCIGG GMGAAGLFEI F
SEQDB ID: 3101377AMF
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLNYSDEEL AFRAEVRAFL AENLPAEVSD KVRRGISLGK EGHEKWHATL NARGWLAYNW
61 PREFGGAEWN AVERHIFEEE CAAAYAPRIV PFGLSMLAPV LQKFGTKEQQ DHYLPRILSG
121 EDWWCQGYSE PGAGSDLASL KTRAVRDGDH YVVNGQKTWT TLGQYANWIF CLVRTDPEAK
181 QQEGISFLLI DMTTPGITVR PIVLLDGTPE VNEVFFDDVR VPVENLVGEE NKGWTYAKYL
241 LTHERTNIAG VGFSQAGLDA VKRIARIETA NGRPLIENPH FAARLAQIEI DLMAMATTNM
301 RIISQAASGQ APGVESSMLK VKGTIIRQEI NDLTRRAVGP YAMPFASEAI EGDNAPIGPD
361 YAGPVSAQYF NNRKLSIFGG SNEIQRGIIA KVKMGG
SEQDB ID: 3101377AMG
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDFNLTEERQ MLQDTLRRYL ADRYTTSVRN TILDSDSGMS ADIWAGLAEL GVIGALFSEE
61 DGGFGGAGFD IATVFEELGR AGVVEPMLDS AILGGRLIAA LGDEAQRGLL EEIIGGAAHL
121 ALAHGEPASR YDLTRVETSA RVDGDGIVLN GRKAVVVNAE AAGHLIVSAR ESGGIFDLDG
181 ISLFLVPVGT PGVTQHGYPM LAGGRAAEVT LDTVHLPQSA RLGAAGEGLA PLMDAIAAAN
241 VALCAECVGA MQSAVELTRG YLMTRKQFGR PIGTFQALQH RFADMLIELE QARSALINAS
301 GHLDSADRDR QIAAARNLIA RVGRLVAEEA IQMHGGIAMT QEYELAHIAK RIVMADHRFG
361 DADYHLERFI ALSAA
SEQDB ID: 3101377AMH
Reference:
3101377
Name: ORF TIGR00369
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSAQPDPAG PRVRASGCQQ MVGFRIDLSH ADGHARCHLD IGAQHLNSQD VLHGGIIAMV
61 MDVACGNAAS AYFDRQEHPP VVTVSLNTNY LAAVDRGRVT GIGRVTGGGR KLAYVNGELL
121 HEDGTLIATA TGVFKRHRLV R
SEQDB ID: 3101377AMJ
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLARVDDRGD RLVVVNMNGA RRGALSPDLY AAIAEAMEQA ADPRIRAVIL SSEGGFFCAG
61 GDLNVLIERR QLSEAERREK VDLLHDLIRA IRACPVPVIA AVEGGAAGAG ASLALACDLL
121 VAAEDAKFTA AYVKAGLVPD AGLTSALARM LPRQLAMEMC LLARPVTAAR MADLGVVNVL
181 ATPGEAETQA HALADALAQG PRGAQGVIRR LVAEAYEASE AQQLDAERDA MARAAGGDEA
241 AEGIAAFLDK RKPRF
SEQDB ID: 3101377AMK
Reference:
3101377
Name: long-chain fatty acid-CoA ligase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEKWHDYPGA QIASRPDAPA FSDSGGADWS YGDLDRAISA LVDVLSAKGV HANDRVMILA
61 ENCCAVVAAL FAASRLGACA VPINARQTGP EVNKIIAHTE PAAILCASDI SADAAAHAPR
121 LDAQLVEGAF GRMHLATPHP SKPDPVLSDV AVMLFTTGTT GTPKGVMLTH GNLLFGGRSS
181 AELRGMTTDD VIYGVLPVTH VFGLASVVTA ATCIGAPVRL DARFTAARSY AALTSGVTLF
241 SAVPQMHALL MQHAREQGYD HLPGGTLRYT SSGAAPLDPA WKRKAEAFYG VALQNGYGLT
301 ETTAGVSATR NPIGLPDISV GRPLPQVEVR LDEAVIGGGD GVGEVLTRGP HVMKGYYRNP
361 QATEAALHDG WFRTGDLGRH DAEGNLHIAG RCKELIIHGG FNVYPPEVEA ALNDHPQVIQ
421 SAVVGRMIEG DEKVVAFVQV APADAPDPDE LRAFAAARLA GYKRPSQIVL ATALPAAPTG
481 KILKHKLLDH FADQLD
SEQDB ID: 3101377AML
Reference:
3101377
Name: ribulose phosphate 3-epimerase, Class: EC5.1.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpe
Sequence:
1 MSFDRKIKIA PSILSADFAN FGAEIRAIEA EGADWVHVDV MDGHFVPNLT FGPMAVKAFR
61 PYVKTVMDVH LMIAPVDPYI DAYADAGADV LTAHIEAGPH IHRTLQAIRG AGMKAGVALN
121 PGTPAESVAH LLDLTDLICV MTVNPGFGGQ KFIDMTAKIA RLRQMIGDRP VHIEIDGGVD
181 PKTAPLVAQA GADVLVAGSA VFRGGSVDNP GVYGQNIAEI RAAAEGVWA
SEQDB ID: 3101377AMM
Reference:
3101377
Name: phosphonate ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phoC
Sequence:
1 MLRIDKLTKR FGDNIAVNAA TLDVDKPCMI GIIGRSGAGK STLLRMINRL SDATDGRILF
61 EDRDVTRLRG AEKRAWQAQC AMIFQQFNLV PRMDVVSNVL HGTLNRRSTL ATMFNLYPTE
121 DIHRAIDILD RLGIAAHAAK RAEALSGGQQ QRVAIARALM QDPAIILADE PIASLDPMNA
181 QVVMQALRRI HEEDGRTVIA NLHTLDTARR YCDRVVGMRD GRIVFDGLPE QLTTGVAREI
241 YGADASFSEA ATSTEIDTLD AALPARQRAG ATA
SEQDB ID: 3101377AMN
Reference:
3101377
Name: phosphonate ABC transporter, Subunit: periplasmic phosphonate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phoD
Sequence:
1 MGRTNQPERP KMKKFVAVLA ATTALATPAL AQEITEFRIG ILGGENAQDR LNSNECLREK
61 AEDLLGVETK LFAPADYNGV IQGLLGGTID MAWLGASGYA KTYLSDPEAV EPILVKVNND
121 GGYGYYSIGF ARKDSGITSL ADMKGKVFGF GDPNSTSGFL IPSIEIPQET GATMTSGDYF
181 GEVKFTGGHE QTIVAVGNGE VDGGVTWADG LGAWEDGFNS GALRKAVDAG LVDMNDLVQI
241 WQSKPIPEGP FVVRKALPAD VKVKMTGLLA SLKSMDEDCA YGVLQGDAKG FMPITHDAYE
301 VIIEARKLKS N
SEQDB ID: 3101377AMP
Reference:
3101377
Name: phosphonate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phoE
Sequence:
1 MTDLTAGQGE LARIREDYTA LTQRKRVYGG ILLILFVSLM AAGFHTADDR NAGGFVDGWR
61 RIFDYPAEVL SEALEKSAQL PGHLVHFLPA LVETLNIAAA ATLIGTLGGT ALALLSTRGL
121 AYWPRLIPLF RRIADICRAV PEIVIALVLI FVLGGGPVPA MIAIAIHTAG ALGKLFSEVA
181 ENVSLKPVEG LESTGANWAQ RMYLGVIPQV GPNFVSYALL RFEINIRASA ILGFVGAGGI
241 GYELRNAMSW GQGRYDEAAA IFLLLFVTIV AVDQISDRLR ARLTHGARAG ATA
SEQDB ID: 3101377AMQ
Reference:
3101377
Name: phosphonate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnE
Sequence:
1 MSTATTDLEL NHLKERADGL FARKRLLALG LPALVLAYLA YIFFAFDMPG LAARANWDNG
61 RTLVADSYSY KTHVTRDNRT GDVSVAVEGE RKGSYPEGTG PGWVALGETT VIDLKDGHVV
121 RFGPETVEYD IPGYGTLRAT PTRGQGVVTE LPPGALPDWI NMSKNRITVT TEAGRLTVTR
181 NRSEVFRYFT GWELFWFTLD SPYHGLSPAE LARRATQGEA GAIWHDFWNN NMWRHGDVAW
241 AIGETILMAF LGTFGAAIIA LPLAFLAARN FNPLAPFRFA VRRVFDFVRG VDALIWTVVL
301 ARAFGPGPLT GALAILVTDS GTFGKIFSEA LENVDDKQIE GVQSTGANAA QRYRFGVIPQ
361 ITPVLLSQVL YFLESNTRSA TIIGAITGGG IGLLLTQAII TQKDWEEVAY YILLIVLMVM
421 LMDWLSGWLR ARLIRGGSDK PRKTRTAPQP DPFLLP
SEQDB ID: 3101377AMR
Reference:
3101377
Name: chloramphenicol acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLSADTPF VHPGCQITDS SFGAFVEIGA NSRVANSTWG DYSYCDRTCD IANARIGKFA
61 NIASFTRIGA TDHPMEKASL HHFHYRSADY WDDAEHDADW FAHRAGRTAT IGHDTWIGHA
121 AIIKPEVTIG HGAVIASGSI VTKDVAPYTI VGGNTAGLIR RRYPEDVAER MMALAWWDWD
181 HARLRAALPD FRSLRAEEFL EKYL
SEQDB ID: 3101377AMT
Reference:
3101377
Name: 2-dehydro-3-deoxygalactonokinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRDWIALDW GMTARRIWVM RGRDPLDEIV ETGPRAPDRA AILSLVAGRH AGQGVPVVAC
61 GPLGPVRETV PCAPLSGGLW QIDLGDPRVL LHAVPGLAQT EPADMMQGDE TRIAGFLALN
121 PDWDGVICLT GETSRWAHVS AGEVVSFRSF LSGAMLAALA GGTVLGRWLA APDLDKTAFE
181 AAVADGLSRP EQMLARLWSA HAAATLQGLP AGIARARILG GLIGAELAAT RPFWLGQQLA
241 VMGEGEMPRL YVDALGAQGA PATQADAARM TRAGLVAAWG AMTA
SEQDB ID: 3101377AMU
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFSTEIEVR FKHCDPAGIV FFPRYFEMIN DVVEDWFAND LGCPFHELVK ENGAPTAQIQ
61 ARFTAPSLHG DVLSFRLTPT RIGNSSLDYD LTAHCGDELR LRATATLVHV ARLGRSQPWP
121 QAIRERVAAQ IDSA
SEQDB ID: 3101377AMV
Reference:
3101377
Name: phosphoglycolate phosphatase, Class: EC3.1.3.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gph-1
Sequence:
1 MPLALVFDLD GTLVDSAPDI TAAVNRMLAG EGQAALDLAT VTSFVGNGLP HLVARVIDHL
61 GLDMARHDAL TATTLAEYNR AASALTRPYP GVIEALDLLK SQGAVMGICT NKPEEPARHV
121 LADLGLAGFF DVVIGGDSLP TRKPDPQMLQ ASFAALPDLP RLFVGDSEVD AETAQNAGIP
181 FLLFTQGYRK RPVAELPHRA AFADYAALPG LAAQALSI
SEQDB ID: 3101377AMW
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLTRRTLLG RLGAGIALTA TTPLRLWSAT ETSIGAARIT SLSDGHLVLP AGFLFDPMPQ
61 EDLAPLRARY GLEGATLRPD CNITLMQSEG RNILFDAGSG TSFQDSAGDL VDALDAIGLA
121 PDDITDVVFT HGHPDHLWGV LDDFDDPLFA NARHLIGRVE RDYWLDPETV DQIGADRASF
181 AVGAARRLEA LETLETFEDG DEILPGVAAV ASFGHTPGHM SFEIRAGDAA LMVVGDAIGN
241 HHLAFARPHW PSGADQDLEM GAETRVRLMQ RLASEHMTMI GYHLPEGGMG HVEAAEDGYR
301 FVPLEG
SEQDB ID: 3101377AMX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIHSATPTA DPAFQILPSH KAEELTKGGN LAHIRLGDQL YTLRITRAGK LILTK
SEQDB ID: 3101377AMY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAAVHRGGA AVGHLADLPT LEASAVHCLR LWSDATEGRA ALPEGRSAEL LKQICGLCAS
61 YGRRPLMRHG LGCACLGADE ACFAHMVAAA ATGAREDALM LAALIVRPDL APALVALSEQ
121 LGLALHRRPM VGAAQYRTLE SRAGRLH
SEQDB ID: 3101377AN
Reference:
3101377
Name: core-2/I-branching enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVHTALDRA QQVAQHWTAS GCPVVIHVDR KVSRKTFKAF HDACVKDPLI RFSTRHRCEW
61 GTWGIVAASQ AASEQMLAEF ADVRHVYLAS GSCLPLRPVQ ELIDYLAARP RTDFIESATT
121 ADVPWTVGGL DQERFTLRFP FSWKKHRYLF DKYVNLQRRL GFKRRIPAGL VPHMGSQWWC
181 LTRHTLSAIL EDPERTVYDA YFRKVWIPDE SYFQTLARQF SANIESRSLT LSKFDFQGKP
241 HIFYDDHLQL LRRSDCFVAR KIWPRAERLY QAFLTDQAGA MKRTEPNPGK IDRIFAKAVE
301 RRTRGRDGLY MQSRFPRHGN ENGLTSNPYS VFQGFTELFE DFEPWLAKAT GTRVHGHLFG
361 PERAEFAGGE RLVNGALSDC ALLRDYNPTS FLTSLIWNTR GERQCFQFGP ADNQKIDWLL
421 ARDPNAQISV ITGAWAVPLF KSNRNFADLR KEAARLQRIE SKHLEILRSV WTKARVRIWT
481 MAEFVEAPME PIQTIVDEIG QSSPRRLTEA PTMVDLTGFG QFLQNLKNQG MHPYLMGDFP
541 VEPAPINNPK PTRKPYLVR
SEQDB ID: 3101377ANA
Reference:
3101377
Name: M23/M37 peptidase/aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTEFWAEAL RVHWGIEAVL ERLDGEYDLN FLARARNGQD YVLKVMRPGC EAGLVEMQVA
61 ALDHIAEVAP GLPFPKVFAA LDGAMLPEIA DEAGAPRLAW LLERLPGRCY ARAKPHSEEL
121 ILKLGRVLGA TDRALEGFAH DGLARNFKWN LMQAGWIGAE LQAIADPARR ALLREIAAEF
181 SGLRDRLAAL PVQAIHNDVN DYNILVKGGL DETRRVSGLI DLGDMCAAPR VCDLAIAGAY
241 VVLDHPKPER ALAALVRGYH AANRLSAAEV DLIWPLLRMR LAVSVVNSTL MAAQNPDDPY
301 VTISQAPAWR FLENASVNGG LMAARLRVAC GLPVTDGAER VHAYLNQNRG RFAAMFGTDL
361 GEAPMGSLSV ENSTWPQNPF HMPIEEAARV GEEFGTGLWL GYYNEPRLIY AEPGFRKGPW
421 KASDRRTVHL AVDVFAPAGT VLHAPLSGRV EAVENRTGHL DYGGVVILHH ETPQGDAFYT
481 LYGHLDPEVC DRLKPGDPVA QGAGFARLGD AGQNGGWAPH VHFQLALTTQ GMETDWPGVG
541 DPDEMDLWHA VCPNPAALLN LPDDKVFYRP SDKAAVLAGR RAHFGGNLSL TYDDPVMLVR
601 GWKHHLFDEW GRPYLDAYNN VPHVGHAHPR IQAVAADQLQ RMNSNTRYLH PAQLAFAEKV
661 LSKLPARFEV CFFVNSGTEA NELALRLARA HTGNMGMVTP DHGYHGNTTG AIAISAYKFN
721 KPGGVGQADW VELVEVADDY RGSFRRDDAE RATKFADFVD PAIARLQEMG HGVAGFIAET
781 FPSVGGQIIP PKGYLAAVYD KIRAAGGVCI ADEVQTGLGR LGDYYFGFEH QGAEPDIVVM
841 GKPIGNGHPL GVLVTTKAIA QSFDNGIEYF STFGGSTLSC RIGKEVLDIV DDEGLQENAR
901 LMGERLMTGL RVLEGEFGCV GDVRGMGLFL GVELINPDGS EGTEICRYVK NRMRDHRILI
961 GSEGPKDNIL KIRPPLTIEA EDVDMILWAL REVLAEVGDW APAPACDHDH HHTGCGCC
SEQDB ID: 3101377ANB
Reference:
3101377
Name: 6-phosphogluconate dehydrogenase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKVAFLGLG VMGYPMAGHL KSAGHDVTVY NRSAAKAEKW VTQHGGAMAT TPRAAAEGAE
61 FVMACVGNDD DLRSVCAGPD GALAGMAAGS VFVDHTTVSA KVTRELYAAA RDGGVGFVDA
121 PVSGGQAGAE NGVLSVMCGG DQAEYDRAEP VIAAYARICR RIGESGAGQV TKMCNQIAIA
181 GLVQGLAESL HFAEKAGLDG RAVVEVISQG AAGSWQMANR YETMLDDHWT HGFAVDWMRK
241 DLGICLDTAN ETGASLPVTA LVDQFYKDVQ KMGGGRWDTS SLLARLRKLD
SEQDB ID: 3101377ANC
Reference:
3101377
Name: Cu(I)-responsive transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cueR
Sequence:
1 MNIGDVASRT GLPAKTIRYY EEIGLITPQR DLNGYRRFRE QDLHKLTFLG RARALGFTIE
61 DCRTLLALYE DQSRASADVK QVARDHLARI ETKIADLIAM RDTLTELVDA CAGDNRPDCP
121 ILRDLGGAV
SEQDB ID: 3101377AND
Reference:
3101377
Name: Cu-translocating P-type ATPase, Class: EC3.6.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAQTTSLKI TGMSCAGCVG RVERALLAVP GVAEASVNFA TKTAQVHHDS PVAALTQAAA
61 GAGYPAEVSE TTLTVEGLSC ASCVGRVERA LNAAPGVVEA QVNLATRTAR VSYVTGSTDP
121 AALAAVSTAA GYAARPEGGA EDGGEEPSDE AAILKRQTLL AILLALPVFL IEMGGHMIPA
181 LHHWIMATIG QQTSYLIQFA LTTVLLFGPG RVFYAKGFPA LLRGAPDMNA LVALGTGAAY
241 GFSLVATFAP GLLPAGTANV YYEAAAVIVA LILLGRWLEA RARGRTGAAI EALVGLQPRH
301 ARIERNGQPV EVEIADIQPG DTLLIRPGDR IPADARVLDG QSHVDESMIT GEPVPVTKSA
361 GDTLVGGTVN GAGALRARAE KVGADTVLAQ IIRMVEQAQG AKLPIQSVVD RITLWFVPIV
421 MGVAALTVLV WLAFGPSPAL GHALVAGVAV LIIACPCAMG LATPTSIMVG TGRAAELGVL
481 FRKGDALQRL QEARVIAFDK TGTLTLGRPE LTDLTTADGF ERDSVLRLAA AVEAQSEHPI
541 AEAITRAAEG DLLAAEAFES LTGLGARARV AGQDVLIGAD RLFDREGIAL GPLRETGAAL
601 AAEGKTPLYA AIDGRAAAVL AVSDPVKPGT AEAIERFHRM GLSVAMITGD NTRTAQALAA
661 KLGIDAVTAE VMPEGKVAAL DALRADHGAL AFVGDGINDA PALAHADTGI AVGTGTDVAI
721 EAADVVLMSG DLRGVANALE VSRATMRNIR QNLGWAFGYN VLLIPVAAGV LYPFGGPMLS
781 PVLAAGAMAL SSVFVVTNAL RLRRVRAALP ATRQAAAPAP AAAPAPAE
SEQDB ID: 3101377ANE
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRAVISGGA GGLGRALSDA LQTRGWHVTL LDRDISAIEP SETQRVIQCD LTDPGQLAAA
61 CALAIGPQGV DLAVYNAGIT QIGLFADSDE ASHRRVFEIN YFAAVNMARA MLGPVRQARG
121 THLAISSVAG FAPLYSRTSY AASKHALEGF FKSLRSEERA HGVAVQIAAP SFVATNLGNA
181 QAQPDGIARP GSATDGMDYM TPEAAAATIL RGLDRGRDMI PVGRVARLAW WINRLSPGLY
241 QRLMESKIGR G
SEQDB ID: 3101377ANF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRILITGAA GMVGRALLEE LDEHDVFATD LVPPKATGAV TWLPMDVTTD DPDRIVGEVR
61 PQVVIHLASI VTPGVARAVA HRVDVGGTRA VLDACLAHGV RRLVVTSSGA AYGYHADNPM
121 PLRESDPLRG NPEFAYADHK RQVEEILAEA RQSAPQLEQV VLRVGTVLGA GTENQITALF
181 RKPRLLAVRG SESPFVFIWT RDLARILARA AGEGPAGIYN VAGDGAMGVS DLARALGKPV
241 LRLPALTLKA ALALARPLGL SRYGPEQVRF LQYRPVLAND ALKQVFGYVP ELASAEVFDL
301 WRREAGL
SEQDB ID: 3101377ANG
Reference:
3101377
Name: bile acid transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGIDDILLN FSPASLMLLN AILAVVMFSI AIDLTLDDFR RLSRGPKPVL VGLFSQFVVL
61 PVLTFALVWL TAPHPSIALG LILVAACPGG NISNFITHRA GGNAALSVSM TAFATVGAIV
121 MTPANIALWG SLYPPTRAIL QETHIDPVQI AITVGLMLIL PLILGVTLNM RRPALTARLR
181 RPLQLLSMGI FIAFIILALA ANWGYFLSFA GAVAGLVILH NALALGGGWV VATLTRLSPY
241 DRRAVTIETG IQNSGLGLVL IFAFFNGLGG MAVAAAFWGI WHAISGLGLA MIMSRTEARR
SEQDB ID: 3101377ANH
Reference:
3101377
Name: monooxygenase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETCDRFAL IGAGPMGLAM AKVMLEQGIA FDGFELHSDV GGLWDIDGPR STMYESAHLI
61 SSKRMTEFTD FPMEEAVAEY PSHRELKRYF HAFAARYGLR DHYRFGAEVL RCEPLGEPGA
121 GWRVIWRDAE GEHTETYAGV MIANGTLSEP NMPTFQGRFD GELIHSSAYR HPSQFDGKRV
181 LIVGAGNSGC DIAVDAIHHG ALCDLSMRRG YYFVPKYVFG KPADTLGGMI KLPMWLKRRV
241 DGMILKWFVG DPQKYGFPKP DYQLYESHPV VNSLVLYHAG HGDLRIRPDI DRFDGRRVIF
301 ADGSSEEYDM ILAATGYKLF YPFIDRDLLN WQGDAPHLYL NALHPERDDL FVLGMIEASG
361 LGWQGRHEQA EMVARYITGL RRGGAAAAEL KAAKSAGFER ATGGMNYLKL ARMAYYVDKA
421 TYRGAVTGWI DRLKRAQS
SEQDB ID: 3101377ANJ
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFVLEKQRQR APSARSLQTR ARILDAAEQL FAARGFEGAS IRDIARAAGV QGGLVAHHGG
61 SKEELFHLVV SRRAGELSRI RIEALETARG RGPLDLACIL DCFIRPYVTL AQEGGPQWVA
121 YGRLLAHVSA DPRWSALAAE CFDPTAQRFI AEIAALYPDA APGQAAMGQI YAVSAMLAHV
181 YSAWRLDTLS PGAEEAGADQ LIAFATAGIH AVMSGRAPEK
SEQDB ID: 3101377ANK
Reference:
3101377
Name: choline sulfatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNHPNLLVI VSDEHRKDAM GCAGHPIVKT PNLDALAARG TMFEAAYTPS PMCVPTRAAL
61 ATGDWIHRTG HWDSATPYAG QPRSWMHDLR DAGREVVSIG KLHFRATEDD NGFSQEILPM
121 HVVGGIGWTV GLLRKNPPAY EAAAELAADV GVGASSYTDY DRAITAAAEA WLADPARQER
181 PWAAFVSLVS PHYPLTCPEE WFALYDPDQM DLPVGYGQGL PDHAELRNIG GFFNYDAYFD
241 AQKMREAKAA YYGLTSFMDD CVGRVLAALE AGGKADNTVV LYVSDHGDMM GDQGFWTKQV
301 MYEASAGVPM IAAGPGIPAG HRVSTCTSLT DIAATARELC GLAAREDLPG LSLRSIATAP
361 DDPDRAGFSE YHDGGSRTGT FMLRWGRWKY VHYVGEAPQL FDLERDPQEL TDLAPRAAED
421 PDMRALLAEG EHRLRAICNP ETVNARAFAD QQRRIAELGG EEACRTGYSF NHTPVPQEGG
481 AL
SEQDB ID: 3101377ANL
Reference:
3101377
Name: 4-coumarate/CoA ligase, Class: EC6.2.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fadD
Sequence:
1 MNRPARAGNP GGRIQMSILK SRFEDVALSD KSVTQRVFEG IDPDMTILID GPSGRSYSGA
61 QFIRAVKSLA GGLSAHDMGA GTCVGLMMPN LPEYCIAFHG IAWAGGTITT INPTYTAPEV
121 HHQLNDAGAQ VLVTIPAFLD TARAAIEGTG VDRIVVVGDA PEGTLALSDL MGPPLEHQAP
181 VDVAEHVVVL PYSSGTTGMP KGVMLTHRNL VVNIDQTLLP ADLNPGEMTT AFLPFFHIYG
241 LQVLMNIYLT AGGGLVTLPR FDLEQYLDCV IRYRTPRLWI VPPVALALAK HPVVANYDLS
301 CVEQVFCAAA PLGRDVAEGL GERINARVNQ GYGMTELSPV SHVSPHGEGK PGASGVAISN
361 TECRIIDPET GTDLPLGEDG ELWVRGPQVM KGYLNNEAAT RATIVEGGWL RTGDIAHFDE
421 DGFLYITDRL KELIKYKGFQ VAPAEVEAAL LTHPAIADAA VIGAPDEAAG EVPLAFVVAA
481 AGQAAPSLAE VQAYLDTRLA HYKQVRQMQV IEQIPKSASG KILRRLLRDA QGAQA
SEQDB ID: 3101377ANM
Reference:
3101377
Name: ribosomal protein S1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsA
Sequence:
1 MANASMEEFE ALLNESFEMD TPEEGSVVKG KVIAIEAGQA IIDVGYKMEG RVELKEFANP
61 GEAPEISIGD EVEVYLRAAE NARGEAVISR EMARREEAWD RLEKAYADDQ RVEGAIFGRV
121 KGGFTVDLGG AVAFLPGSQV DVRPVRDAGP LMGLKQPFQI LKMDRRRGNI VVSRRAILEE
181 SRAEQRAEVI GNLTEGQTVD GVVKNITEYG AFVDLGGVDG LLHVTDMAWR RVNHPNEILN
241 IGETVKVQVI KINKDTHRIS LGMKQLQEDP WDLVGAKYPL ESVHTGRVTN ITDYGAFVEL
301 EPGVEGLVHV SEMSWTKKNV HPGKIVSTSQ EVEVMVLEID GAKRRVSLGL KQTMRNPWEV
361 FAETHPEGTV VEGEVKNITE FGLFIGLPGD IDGMVHLSDL SWDERGEDAI QNYRKGDMVK
421 AVVSEVDIDK ERISLSIKSV GGDKFAEAVG GVKRGSIITV NVTAIEDGGI EVEYEGMKSF
481 IRRSDLSRDR ADQRPERFSV GDKVDVRVTN VDSKTRRLGL SIKAREIAEE KEAVEQYGSS
541 DSGASLGDIL GAALKGDN
SEQDB ID: 3101377ANN
Reference:
3101377
Name: NUDIX domain protein, Class: EC6.-.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDLAIRAFL ASLVAIRSTP TGWQVLLLKR TQTLAGTWCQ IAGKIEEGET AWRAALRELE
61 EETGLTPMQL YSADICEQFY EAHRDAITIA PVFVAFVDPD QTVRLNHEHS AHRWVSFEEA
121 AEMVTFGGQR RVLRWVEEEF VKRAPAEQLR IDPAG
SEQDB ID: 3101377ANP
Reference:
3101377
Name: integration host factor, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ihfB
Sequence:
1 MIRSELIQKI ADENPHLYQR DVERIVNTVF EEVTDAMARG DRVELRGFGA FSVKKRDARI
61 GRNPRTGDTV HVEEKHVPFF KTGKLLRDRL NGKA
SEQDB ID: 3101377ANQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRYIRYAFL ATLGILLVSV SLANRQMVTL SLLPEDLAHL LGVNFSLTLP LFLVVLGGIA
61 AGVVIGFVWE WLREHKHRRT ADVKHREVRK LEREVKSLKK KQNEGKDEVL AILDDAAA
SEQDB ID: 3101377ANR
Reference:
3101377
Name: N-(5'-phosphoribosyl)anthranilate isomerase, Class: EC5.3.1.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpF
Sequence:
1 MADDIRVKIC GLSDPEHLRV AAEAGARYMG FVFFAKSPRH LTVERAAELA VSVPVGVAKV
61 ALVVNANDAE LEAITTAVPL DMLQLHGKES PERVAEIKAR FGLPVMKAVG VAEAADLAQI
121 DLYSEVADQL LIDAKPPQGA ELPGGNGLAF DWRLLAGRKY WRKPWMLAGG LTPENVGEAI
181 RLTGARQVDV SSGVETTPGV KDAGLIREFL AAARAD
SEQDB ID: 3101377ANT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRRKVRDME RMVGREAFLA EIRRRGFTAV ENAGQVIVFC NAEPVRLVTA RPQTFKESL
SEQDB ID: 3101377ANU
Reference:
3101377
Name: Trp synthase, Subunit: beta, Class: EC4.2.1.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpB
Sequence:
1 MANDLFNSFM SGPDEQGRFG IFGGRFVSET LMPLILSLEE EYEKAKTDPS FWAEMDDLWT
61 NYVGRPSPLY FAERLTEHLG GAKVYMKRDE LNHTGAHKIN NVLGQIILAR RMGKTRIIAE
121 TGAGQHGVAT ATVCAKFGLK CVVYMGAHDV RRQAPNVFRM RLLGAEVIPV TSGRGTLKDA
181 MNDALRDWVT NVRDTFYCIG TVAGPHPYPA MVRDFQSIIG KEAKEQMMKA EGRLPDTIIA
241 AIGGGSNAMG LFYPFLDDTS VNIIGVEAGG KGVNEKMEHC ASLTGGRPGV LHGNRTYLLQ
301 DDDGQILEGY SISAGLDYPG IGPEHSWLHE VGRAKYVSIT DMEALEAFKL CCATEGIIPA
361 LEPSHALAHV MKLAPELPKD HIIIMNMCGR GDKDIFTVAK FLGFDMSDTE GRDAED
SEQDB ID: 3101377ANV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPDPSLNVL GGALAPCSTD PVTGFFRDGH CNTCVQDQGS HTVCAVMTAE FLAYSKYVGN
61 DLSTPRREFG FAGLKPGDRW CLCAARFMQA ADEGCGPQVH LEATHRRALE VVPLEVLQRH
121 AIGRD
SEQDB ID: 3101377ANW
Reference:
3101377
Name: 6-aminohexanoate dimer hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVFGKWLGR ALLALILAAG VIGVWKWEEI NRLLAVNSLF NAEKIVANFS HMDAAFLTAP
61 VARGNGPTSD LPHGAAYELP TGGTDWIEER AVTSLLVMKD GQIRFEEYYL GTSPDDRRIS
121 WSVAKSYLSA LLGVLLEEGA IASIDDPVVK YVPQLKGSAY EPASIRNVLN MASGVTFDED
181 YFDKNSDINR MGRVVALGGT LDDFAASFTD SFAAPGETWQ YVSIDTHVIG MVIRGATGRS
241 VTDLLTEKIL APLGLERDGY YITDGAGVAF VLGGLNFTTR DYARFGQMIL QDGSYGGKQV
301 VPAGWIAAST AASAPTAAGK IGYGYQWWIP VGAGPGEFLA RGVYGQYIYF DQPRGVMIVT
361 TGADRGFRGE GVNEANIEMF RKIAQSL
SEQDB ID: 3101377ANX
Reference:
3101377
Name: peptidyl-tRNA hydrolase, Class: EC3.1.1.29
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pth
Sequence:
1 MRLFVGLGNP GAKYARNRHN IGFMALDRIA EDHGFGPWRV KFQGQIAEGR LGREKVLLLK
61 PETFMNRSGQ SVGEAMRFYK LDSTDITVLH DELDLAPGKV KVKAGGGHAG HNGLRSIHDH
121 IGAAYDRVRL GIGHPGRKEA VAGYVLHDFA RADEDWLEDV LRGVSEGAPH LAAGDGARFM
181 NSVALRTAPP RPSTGTGRPP AKTPARAEEP PAPAASPAPA TAPLPDARSP LQKLVDRFK
SEQDB ID: 3101377ANY
Reference:
3101377
Name: ribosomal protein L25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplY
Sequence:
1 MAGEIPDLVA LERTGTGKGA ARQARRDGMV PGIVFGGDNE PLPIQIPFNR LLKMLKAGRF
61 KSTLFNLKVE GHEDVRVICR DVQRDVVKDL PTHLDLMRLR RTSRIKLFIH VDFVNHAAAP
121 GLKKGGVLTV VRPEVELEVT AGDIPESITV DLTGLNIGDV VTISSVTLPA GAKPTVERDF
181 VIANISAPSG LAASAAEEED EEGESEE
SEQDB ID: 3101377AP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDSSVSLWDS YRMRVRRKRR LLRCIRKSRE LRAVQNNTAA IRPSDVLLVS TVRNEKIRLP
61 YFLRYYRELG IDHFLIVDND STDGTLDYLG GQSDVSVWHT THSYKSATFG VDWMNWLKRS
121 YAHDHWVLVV DPDEFFIYPF CDTRPIQALT DWLDNSSIRS FSAMLIDVYP KGRIDDVPYV
181 EGQNPLEIAN WFDSGNYMIK KNPEYGNLWI QGGPRSRVFF PDNPKKAPAL NKTPLVKWNR
241 RYAYVSSTHA LLPRGLNQVY DEWGGEKASG ALLHTKFLDT FTVKAAEELT RRQHYSNSVE
301 YKAYADRVQD QPDLWCKWSE KYINWRQLEI LGLMSKGNWA
SEQDB ID: 3101377APA
Reference:
3101377
Name: L-lactate dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVITNIEDL KRIYERRVPR MFYDYAESGS WTEQTFRENS SDFDLIRLRQ RVAVDMSGRS
61 TASQMVGQDV AMPVALAPVG LTGMQHADGE IKAARAANEF GVPFTLSTMS INSIEEVAEA
121 TGRPFWFQLY TMRDTDYTSR LIQRAKAANC SALVITLDLQ ILGQRHKDLK NGLSAPPKLT
181 PRTIANLMTK WAWGIEMLGA KRRNFGNIVG HVHGVSDTAN LGAWTAEQFD PTLDWGKVAK
241 LMEQWDGKVI LKGILDAEDA KMAAKLGADA IVVSNHGGRQ LDGALSSIRV LPEIMDAVGG
301 DIEVHLDSGI RSGQDVLKAL ALGAKGTMIG RAFVYGLGAM GQKGVTTALE VIRKELDTTM
361 ALCGERNVAD LGRHNLLVPE DFGGRWA
SEQDB ID: 3101377APB
Reference:
3101377
Name: MaoC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMYWEDFPA GFRYESDPWE MTGEEIMDFA RKWDPQPFHI DPEAAKDGPF GGIIASGWHT
61 LVTAFERWYA SGLWAEASMG SPGMTDVKWM VPVRPGDRLR VVATVIDSTA SRSRPDRGRI
121 TVLSEIYNQD GQKVAEYSGI NILRRRP
SEQDB ID: 3101377APC
Reference:
3101377
Name: Trp synthase, Subunit: alpha, Class: EC4.2.1.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpA
Sequence:
1 MTRIDAKFAE LKAQGKKAFV SYVMAGDPDF DTSLELVKGL PGAGVDIIEL GLPFTDPMAD
61 GPTIQLAGQR ALDGGMTLQR TLDLATEFRK TDNTTPIVMM GYYNPIYSRG VDRFLADAKA
121 AGIDGLIVVD LPPEEDSELC LPAQAAGLNF IRLATPTTDD KRLPRVLQNT SGFVYYVSIT
181 GITGSAEAEA TDVGPEVARI KAATDLPVIV GFGINTPEKS RAIASVADGA VVGSAIVGQI
241 GAGKPVAEVL AFVKTLSDGA HSA
SEQDB ID: 3101377APD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQFLLTAIL ALGLTGTAQA QSLILGVGYA DFQHNGSRDQ GVLSLEYQHT PFWERGRLSA
61 RLAGAATVHN NGDFHLGAGV AGEYALDRNW FIEASVLPGL YIEGEDSNTL GSRFEVRSLF
121 GVGYRFDNGN ALSLAITHKS NASISDFNPG VNSVLLRFHR SF
SEQDB ID: 3101377APE
Reference:
3101377
Name: GTP-binding protein, Isotype: YchF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ychF
Sequence:
1 MGFKMGIVGL PNVGKSTLFN ALTRTAAAQA ANFPFCTIEP NVGEVGVPDA RLDKLAAIAK
61 SKQIIPTRMT FVDIAGLVKG ASKGEGLGNQ FLANIREVDA IAHVLRCFED GDVTHVEGRV
121 DPVADAETIE TELMLADLES IEKRRANLVR KLKGNDKDAQ QQDRLLAVAQ AALEDGKPAR
181 VVEVSDEDAK AWKMLQLLTT KPVLYVCNVG EAEAAEGNAH SARVAEMAAA QGNSHVIISA
241 QIEEEISQLE DDEAAMFLEE MGLEEAGLDR LIKAGYALLH LETYFTVGPK EARAWTIRQG
301 TAAPQAAGVI HGDFEKGFIR AETIAYDDYI ACNGEQGAKE AGKMRAEGKS YVVKDGDVLH
361 FLFNT
SEQDB ID: 3101377APF
Reference:
3101377
Name: MAPEG family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGPTGSQSET AMSPDPARRR VFARIILAYP VALTAVAVLV NLVLFDPSPP VAALPASGIL
61 WALIGAAVLL VINHSWLMTS TELTRLAHGI RTTPEEWQAS AHAKSAVAEI GWQELERRQN
121 AHRNTTENLA VFTFAALAVS FASPDIGAAQ LWILAFALAR LGHGLGYLTG HDGLRGLSMS
181 LGLIALYGLV SLPLLGLLV
SEQDB ID: 3101377APG
Reference:
3101377
Name: amidohydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGKLVITNI GLLLSGKMEE PIYDGDCVIA IDGRISDWGY EGDLDTEGAD TLIDANGVTL
61 APGLIDSHVH PVVGDYTPRQ QQLHWIDSTL HGGVTTLISA GEVHMPGRPK DIVGLKAMAI
121 AAQRWYENFR PSGVKVMAGA PVIEHGMVEQ DFKELADAGV KLLGEVGLGT VKDGKTARQM
181 VDWARKYGIQ STIHTGGPSI PGSGLIDADM VLETGTDVIG HINGGHSALP DDQIMCLCES
241 CTAGLEIVHN GNERAALLTL NTARELKQMD RIILGTDGPA GSGVQPLGIL RMVAMLSALG
301 NVPAEIAFCF ANGNTARQRE LDTGLLERGY AADFVLMDQA QHAPGKTILE SVQLGNLPGV
361 GMTVIDGVVC SERSRNTPPA TRLPRIVS
SEQDB ID: 3101377APH
Reference:
3101377
Name: CAIB/BAIF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAPLQGLKV VELARILAGP WIGQTLADLG AEVLKVESPE GDDTRKWGPP FIEREGDRSA
61 AYFHGANRGK TSIALDFGDA GDRAKLLDLI READVLIENF KVGGLKKFGL DYDSVKEVNP
121 RLVYCSVTGF GQDGPYAHRA GYDFLIQGMS GIMDLTGDPA GEPQKIGVAF ADIFTGLYGV
181 IGIQAALAER ARSGMGQHVD LSLLDCMTGV LANQAMNFLA SGQCPTRLGN AHPNIVPYQV
241 FPVADGHIII ACGNDRQYGT LCTILGVAEL INDPRFATNP DRVAHRAEMT ELLTTACLKW
301 TKADLLAALE QGGVPGGPIN SVAEALADPQ IAHRGMRIEP EGVPGLRTPI RFSRSELVLD
361 KASPKRPVRS
SEQDB ID: 3101377APJ
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDDTAQHGAE PYRLDDQVGY LLRLASQRHA AIFQSQTIEG LTATQFAALV RLSEHGKCSQ
61 NQLGRLAAMD VATIKGVVDR LRQKGLTLAE PDPGDKRRML ISLSPQGAAL VARMKDAGAR
121 ITADTLAPLS PTEQRSFLRL LAKLS
SEQDB ID: 3101377APK
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAACSTRRAP MLEIDGLTAR YGRAQILNGV SLTLGRNEVV ALLGRNGAGK STTMKSVMGL
61 VRQTGGSIRL DGTNILGRAS HLICRAGIGY VPEDRRIFGE LTVEENLEVG RRPAREGAPH
121 WSADHLFQLF PNLAERRQNL GKQLSGGEQQ MLSIARTLMG NPALVLLDEP SEGIAPVIVE
181 QMANVISELK REGLSVLLSE QNLHFAREVS DRAYIIEKGT MRYEGDFADL DARPEVSAQY
241 LAV
SEQDB ID: 3101377APL
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPVLEVRGL SKAFGGLQAV DDVSFDLKQG EFLALIGPNG AGKTTCFNML NGYLPPSAGS
61 VKLNGRELIG TPPRRIWRLG VGRTFQITAT FLSMTVLENV QMALISHHRR VYDLFSRATR
121 LFLDEAMALL DLVSMREQAD RPCSELAYGD LKRLELAIAL AHEPALLLMD EPTAGMAPSE
181 RVALMALTAD IVARGHVSVV FTEHDMDVVF AHAHRILVLN RGQLIAEGTG AEIRANPLVQ
241 EVYLGGGRLF DKEGAHA
SEQDB ID: 3101377APM
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGFYLAQLLT GLANASSLFL IASGLSIIFG VTRIVNFAHG SFYMLGAYLA YTLVTTLQGG
61 IPGYWFSVLA AAVLVGGIGL VVELTILRRI YRAPELFQLV ATFGVVLIVQ DLTLAIWGAE
121 DLLGPRAPGL DRAVRLMGEP IPEYDLALIA IGPAVLAAIW LVFHRTRWGV LVRAATQDRE
181 MVGALGVNQA WLFSAAFVLG SALAGLGGAL QIPREAVSLQ MDLSIIGEAF VVVVIGGMGS
241 VTGAFVAAVL ISVLNAFAIL IFPQISIVLP FVVMAAVLIV RPYGLFGRPG SEHGGAEEPE
301 QPLRLLDQRS TMVLLALVAM LAFSPAVVSD FTTILLVDVM VATLFAVSLH FMMGVGGMVS
361 FGHAAYFGVG AYAAAMATKM LGWGMLPSMA LGPVAAALAA LFFGWFCVRL SGVYLAMLTM
421 AAAQILWGVT FQWQDVTGGD DGILGVWPAA WAKSDQVYFY LALVLCLGGI WLLRRVAHSP
481 FGYTLRGVRD SRIRAEAIGI DTRFHQWMGF TLAGTLAGLA GAVFVFSKGS VFPDALSIGH
541 SIDGLIMVLL GGIHALAGPV YGAMAMVLIE DWVSRLDYWR FIFGGIILTV VLLAPDGIAG
601 GVRRLIQLVR RDAA
SEQDB ID: 3101377APN
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLAACPTGG PPRQRPEQPA RLRPTDQPEG NDMTLIRRTV LGALAALPLA ALTPQIARAA
61 DTIVLGEVNS YTRLPAFTEP YKKGWELAIE QINAAGGVLG KDLVVVSRDD TGDPATAIRI
121 AEELIAKEGA VMIFGTFLSN IGLAVADFAN QKQVFFLASE PLSDALVWSK GNKYTYRLRP
181 STHMQAAMLA EQAAKLDAVK WATVAPNYAY GQDAVAAFKA ELTRLRPDVQ FVEEQWPPVF
241 KIDAGPTVRA IEAAKPDAIY NVTFGGDLAK FVREGSLRYL FDDRPVVSLL TGEPEYLEPL
301 QGETPNGWIV TGYPSTDIDT PEHKAFAEAY IAKFGEAPKT GSIVGYNSVL SIAAAITKAG
361 STETEAMLAA MEGLEVSSSP TGPFMFRAAD HQSTMGAYVG KTALVDGQPK MVDWFYADGA
421 AYLPSEEEAA KLRPAE
SEQDB ID: 3101377APP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKIRKIAVF IEETRIEAGR EISPPTRKAV AVAVIENPFA GRYVEDLTEL MDTGAELGAL
61 LGERCVQALG IRPEQAESYG KSAMVGENGE LEHAAAILHP KLGAPLRKAV EKGAALVPSS
121 KKMGSPGQVL DVPLGHKDAA YVRSHFDGIE VRLNDAPRAN EIMVAVAVTD SGRPLPRVGG
181 LTHDAAEGKD GLR
SEQDB ID: 3101377APQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLPDLILRK TVSALEEIWH EGGPVAATPL RRASVMSILK NPFAGRYEPE IQGFMEDLKP
61 LGLSMAQQLL DMLGGPERIE GYGKGALIGE AGELEHGALW HAPGGYAMRQ LLGSANAIVP
121 SSKKVGGVGA RLDVPITHIN ASYVRSHFDS MEVGCNDAPR ADEMALVLVM STGPRVHSRS
181 GGLEAWQIKG EDGLR
SEQDB ID: 3101377APR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRAVAALLP DGKRLHLQHG PIDLIIGAEG GPGAREAAFV TATARFETVL AELVGELPLL
61 KTELAPDAPL PLGPVARRMD TACRPLMALR LTRMAAVAGA VADEVLAAML SSTPLTRAYV
121 NNGGDIALHL TGDTRFTLAM ATPDGRDLGR ISLGTGDRIG GIATSGLGGR SLSLGIAESV
181 TVLAPSAAGA DAAATLIANA TDLPGHPAIR RAPANTVKDD SDLGQRPVVT HCGPLDRNEV
241 LHALENGRKL AVEMIANGHI RSAHLSLRGQ SCQAGAIPVI APERRLALA
SEQDB ID: 3101377APT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTERIRPEKI RCDACPVLCY IADGKSGACD RYANHGGELV RLDALTVIES GSTRVVPFLK
61 DAQTGDDWDG NIVQQNRAFV TAVGAGTTYP DYKPAPFIVS QQVEGVDMVT VVTEGIFSYC
121 GVKVKIDTDR HIGHERDVVR VDGEPIGHVM TSEYGSKMLS LGGVEHLTGG SKKEGRVTCD
181 ALLRLCNCEA VEMVIGEPGH ETTLIVQAGR APIINGVEEK LMRVGCGSAA IGMFAKQWLG
241 HADDVVVVDD HITGVLSEHQ AGKMLDVPPT GIRIKGRRST PGRYFQVADP GTGWGGTNVE
301 DPLVILNAFK PDVAWPGLRL MMVSTTGEQF AYYELDADLV PQPVPIPEKL RASAELIAEN
361 CEPSVCSVLF MGGAGGSLRA GVTENPVRLT KSVKSSLTHV SCGGAAAYVW PGGGITVMVD
421 VTEMPSNSFG YVPTPALVAP MEFTMRVSDY GTLGGHVSEI KPVAQVISER DRKLGKRDSQ
481 PDPNARENYR WSRGEDE
SEQDB ID: 3101377APU
Reference:
3101377
Name: xanthine dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMDRPLSTTT DFTLNGALTS ASPQPGERLS RMLRERCGAR EVKVGCDAGD CGACTVLVDG
61 APVCACLTPA HQVAGRRVDT LRGLSNDPVA ERLSDSFLAH GAAQCGICTP GMMVATTALL
121 RETPEPTETQ VLDALGGVLC RCTGYRKIIQ AVMRAGAPLL AAPAGDGHSG TAIPRLDGAG
181 KVAGTEAYGD DVAPAGTLEI LLVGAPYPRA GFTLGDIESW RSAHAGVVSV LTAADLPGRN
241 RFGVMPGFED QPVFAETETR FRGEPVAAIV APPEVAATLD LALFPVTWTR LDAVENIADA
301 TAPGAPQLHP DRAGNVMVTG FVACGDAEAA LAASGVVVEA RYATPFVEHA YIEPEAGYAY
361 LDGDKVVVHA CTQAPVLDRD GLQMVLGLGP DRIRIIPTGV GGGFGAKLDM SVQPYLAIAA
421 LKTGQPVRLA YSRVQSMQMS TKRHPSELHL RIGASTDGRL KGFSLQGRFN TGAYASWGPT
481 VANRVPVHGS GPYFIRDYRA EAQGVHTHCP PSGAFRGFGV PQAAIAQETL FDELAEKLGL
541 DPLEFRLINA LATGQPTVCG QVFTQGVGIR ACLQALKPDW TRERAAAEAF NAGNTVLKHG
601 VGIAAGWYGC GNTSLPNPST IKCGIRADGT LVLHQGAMDI GQGANTVITQ LFATALGIPT
661 HRIELIGPDT DLTPDAGKTS ASRQTFVTGN AARLAGAALR AAILTRVNAG PEATLTLDQG
721 RIHVTDTDRA HVIDLTDLPA DADGYVLGAT ETYDPPTKPL DKNGQGVPYA QFGYAAHLAV
781 VEIDTRLGTI RPLRFTAAHD VGHAVNPALV EGQVEGGIAQ GLGMALMEEY IPGRTDNLHD
841 YLIPTIGDVP PIETLIIEDP DEHGPYGAKG LGEHALIPTA PALLNAIRHA TGVAIRQTPV
901 TPARLRAALK EAGHD
SEQDB ID: 3101377APV
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: medium
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYHAPALLK DALDRLAKGD VRVVAGGTDV YPAQGTAPFD RDILDLTRIT ALQGISRGAE
61 GWRIGATTTW TQIARADLPP AFDGLRAAAR EVGSIQIQNA GTVAGNLCNA SPAADGVPPL
121 LTLEARVELT SSTGQRVLPL AEFLTGVRRT ALQPGELVSA LLLPNPPTHA RGAFTKLGAR
181 RYLVISIAMV AVVVGCDARG RIDHACVAVG ACSPVAQRLS RLEADLIGQR PQDVTVGQGH
241 LAPLSPIDDI RGSAGYRLDA VAEQIIRAIR AAGGQ
SEQDB ID: 3101377APW
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSALARHRH FAKAAEECGI SQPAFSMRIR NLEERLGVTI VRRANRFQGL TDEGEMIVRR
61 ARRILGDAKA LEQEVAAIRG EISGALILGV IPTALAFTGR LVRRLHQAHP RIVARIDSMS
121 ATAIQQGLDE GTIDAGITYG DSIGTDLRHV QPLYEETYVL LVPAHLTEAT GPIPWARVAD
181 FPLCLLEPQM QNRRILDRIF AEQGLHPRIV AETSGFTAAM VMAREGLAAT VVPRVLIRAL
241 GDLRGTRVLP LVDPEVSKPI ALATLERDPE LPTVTALRQV VASLR
SEQDB ID: 3101377APX
Reference:
3101377
Name: formate dehydrogenase, Subunit: beta, Class: EC1.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPLDSKSAG GEPGVWKSGR GRGRRLPKGR VYSDEALAAV RGVLGDRPRR RDLLIEFLHL
61 IQDVYGHLSA DHLAALAFEM KLGQAEVYET ATFYAHFDVV KEGETPPPAL TIRVCDSLSC
121 ALAGAEQLRA ALEEGLDPGQ VRVLRAPCMG RCDTAPVLEL GHNHIDHATP EKVRAAIAAG
181 DTHAHLPDYE GFDAYAAAGG YAVLKGLRAG GDWEAVQDSV LAAGLRGLGG AGFPSGRKWG
241 FVRANPGPRY LAVNGDEGEP GTFKDRYYLE RVPHLFLEGM LIAAWAVEAE TCYIYMRDEY
301 PAVLEILRRE IAALEAAGIV AKGYIDLRRG AGAYICGEES AMIESIEGKR GLPRHRPPFV
361 AQVGLFGRPT LVHNIETLHW VARVCREGPE VLNSIEKNGR KGLRSYSVSG RVARPGVHLL
421 PAGSTIRDVI AAAGGMAAGH VFKAYQPGGP SSGLLPASMD DIPLDFDTLQ PHGSFIGSAA
481 VVVLSQQDSA RDAALNMLRF FEDESCGQCT PCRAGCEKAV KLMQAEHWDQ PLLEELCQVM
541 ADASICGLGQ AAPNPIRLTM KHFAEEI
SEQDB ID: 3101377APY
Reference:
3101377
Name: formate dehydrogenase, Subunit: alpha, Class: EC1.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADGAHVEMV SFTLNGEEVT VPEGLTIWEA AHGRGLVIPH LCHKPDPGYR PDGNCRACMV
61 EVAGERTLVA SCIRPVAEGM VVTTDSARAE GARKMVVELL LADQPEVAHD ASSHFHAMAG
121 LNGVSESRFP AKTPDSVPLL DASHVAMRVN LDACINCNLC VRACREVQVN DVIGMAGRGA
181 GAQVVFDQND PMGASTCVAC GECVQACPTG ALMPATVLDA EQAGDSKDYD REVTSVCPFC
241 GVGCQLSFKV KDNKIKYVTG VDGPANESRL CVKGRFGFDY IDHPHRLTKP LIRRADAPKG
301 LNVDPGNPLS HFREASWEEA LDFAARGLAD LRAQKGSYVA GFGSAKCSNE EAYLFQKLIR
361 QGFGHNNVDH CTRLCHASSV SALLENVGSG AVTATFNEIE NADVAIVIGC NPIENHPVAA
421 TYFKQFTKRG GKLIVCDPRG VGMGRFATHR LQFKPGADVS MLNAMMHVIV EEGLYDQAYI
481 DQFTENWEEM KAHLADYSPE KMEPICGIAA GELRDAARTF AAGKAGMIFW GMGVSQHIHG
541 TDNSRCLISL ALMTGNVGKP GAGLHPLRGQ NNVQGASDAG LIPMFLPDYQ SVTDDGVRSA
601 FTSVWNSGDF SNQKGLTVVE IMHAIHDGDI RGMYILGENP AMSDPDVDHA RAALAMLEHL
661 VVQDIFLTET ANYADVILPA SAWAEKTGTV TNTNRQVQMG RPAVAPPGQA KEDWWIEVEL
721 ARRLGLDWNY SHPSEVFAEM KRNMKSLDNI TWARLEGEAV TYPSLSPEDP GQAIVFGDGF
781 PRANKRARFT PAKIVEPDER PDADYPFVLI TGRQLEHWHT GSMTRRASVL DAVEPEANCS
841 MHPATLRAMG IEPGDMIRLT TRRGSVQVMV RADRAIAQDN VFLPFAYVEA AANILTNAAL
901 DPYGKIPEFK YAAVKVEKAE ALAAE
SEQDB ID: 3101377AQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSSPAPPLS PIGWADAYRL RWKRQRLLWR AFRSRRALTA LADRTAAIRP GQVLAVTTLR
61 NEVLRLPWFL DYYRTLGVGH FLMVDNGSDD GSVEMLAAQP DVSLWQTGAS YRDARFGLDW
121 MTWLQIRHAH GHWCLMVDVD ELLIYAHHDR RDLHALTGWL ERQGRNCFGA HMLDLYPKGP
181 VAAQTHAPGE DPLDILHWFD AAPYRAQRQQ PLGNLWVQGG ARERMFFADD PRRSPTLNKI
241 PLIRWDRRYA YVNSCHSALP RQLNAVYGGP GDSAPSGVLL HTKFLPDIVS RSAEEKTRQQ
301 HFHTPADFDH YYDDLTASPD FWTPSSTRFT GWRQLHDLGL LSPGGWEEG
SEQDB ID: 3101377AQA
Reference:
3101377
Name: cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRGALMSRR FVDLSVPLET GIVSDPPIML PEIEYLTHDQ TAEQVMSFFP GLKREDLPGG
61 EGWAVERLSV ATHNGTHLDA PYHHHSTMNN GARAITIDEV PLDWCFNPGV KLDFRHFPDG
121 YVVSAEDVEA ELARIGHEVQ PLDIVVVNTS AGARYGQPDY LVKGCGMGRE ATLYLTERGV
181 RVTGTDAWSW DAPFALTARA YADSGDAAII WEGHRASMEI GYCHMEKLAN LDQLPPTGFT
241 ISCFPFKIKG ASAGFTRAVA IFED
SEQDB ID: 3101377AQB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEQEPHSGH DGPYPAPVEV RGFAVRPEWI DYNGHMNVGY YGVAFDQALD VMLEEHLGLG
61 KTYAETAGAG PYILQSHVQF RRELLEGEAF HLYFRLLDHD AKRLIYFGQM FADRDGALCA
121 TQEALIMNVS QQTGRGAPFP AWAQARLARM RADHAALPGH PAIGATLALR R
SEQDB ID: 3101377AQC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRCCGRIAL HAIDRGTRGR RLSLLGRREG AKAMEATGKS ERLNRIVDTA RVHFGRPVCK
61 VTAPGGENRS SFRLHFDDMD VIATLRPNVR RTHLEAFVLE RLRAHCDDLP ECLGVVGEVL
121 FQSDVGGRRL NQEIMRHTET GRLDLAAQAA AAIFRIHSAA RRADLHQMLP HLGGSETWIS
181 NLVAAVDSLQ PYSMGIDARF DRAAAAERLA CPGGQFVKWD CRSGNAALDR AGRLRWFDFE
241 YCGLRHGAED FAWLIGDEAW PIAPDQMVDV MIDAFDPGCG HRIDTYLDYL SVYLTFHCVQ
301 RFKLIVKEAR TRGWLSKARV RKYDDAGVHP EFAMQICSVG AYFAAQSPVT APLARNFEGA
361 VDSFREILRE GRSLKSA
SEQDB ID: 3101377AQD
Reference:
3101377
Name: bacterial sugar transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDYIHTASL AVPMPVASGQ GNRARSALEA ALLPANTNAP LEKRGGAFSP ANGVYATVGK
61 RCLDVAFILL SLPVALVIIG LCALALRLEG GSAFYRQPRL GRDGKRFQIL KLRTMVMDAD
121 ARLERMLAAD PAMRAEWDAT QKLKHDPRIT RVGNFLRRTS LDELPQLWNV LTGDMSLVGP
181 RPMMPEQLPL YGPAESYFAL RPGITGLWQV SERNNSRFDY RAKSDADYAS TLSLRGDLSL
241 LLRTTSVVVR RTGC
SEQDB ID: 3101377AQE
Reference:
3101377
Name: exopolysaccharide biosynthesis domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYHDRDLAP ETETVALMND QTTGIGKRAA AERPFRRKAA LRAEAAAPRV EKVMSPSKPM
61 PLPEPEVVAS LPATLPEPWE RLRATPLGLG RRQVGQMPLV NLHRSDPAAK AFDVLRTRLL
121 QTLKARGWRR IGIVAPTRGC GASFTAVNLA LSIARVPDSR TVLLDMNMRD PGLAGALGLG
181 APGDMRALLR GDVSYLDHLT RCSGTLAVGL GAGVAGDASE LLQAPASAEV LDLIQDELNP
241 DVVICDLPAI LAHDDLAAFL PRLDGVLLVA DGTQTTADQI RRCQQVIGDT TPLLGVILNR
301 GRGTGAENYA L
SEQDB ID: 3101377AQF
Reference:
3101377
Name: chain length determinant protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGMGPIYSL EDILDMIRRR ARVMLAVVVI GTMLSLVFAL MQKHEYEAYE VIQIARPVVS
61 DELARSTVEG SSARRLQLIQ QVLTTRGTML EIIDKYGIYA DIPALRPQAK VDMLRTAVRI
121 EGVAAAREGF SDDGTISVLT ITARMPTAVL AQQVAHEFGQ RTVELSKRTR IENARATLAF
181 FDAQAAALET DIEALEGEIE EFRSHNQLAL PGVLDARRDE IATINGGLLD IARDRIEIER
241 AIQLAEQSER PATAERLKKD YREQLATLDA QRALLDSRKR ELELQIETSP EVERMLGTYD
301 RRLEQLQDEL NQVSTRRNEA EMGFLIEAER QAERLTVIEE AAIPDYPVTE SRKKKAILGA
361 AASFVAAFAL AVLLEMRHPV LRSAGQLERE LGFRPVVTVP YLDGDRRAPS LWSRLMSRFR
421 RRRTPAE
SEQDB ID: 3101377AQG
Reference:
3101377
Name: polysaccharide biosynthesis protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRLLSAFHG SGLMARVLRS ASWLMVGYGG SQALRLAANL LMTRLLYPEA FGLMTLVTVV
61 VVGLNLFSDV GIGPAIAQNP RGDDPDFLNT AWTIQVGRGI GLFTVACLLA VPVSRIYDEP
121 DLTTYLPVAA VALLISGFFP TRIETAHRHL IVGRLTVLDL ISQLIGIGAM AALAIATRSV
181 MALALGGVIT ALAKLILTHF LLPGAANRFR WEPAARSELM RFGKWIFLST ALTFVISQGD
241 RAILGRYLTM EMLGIYNIGY FLGSFPIMLG LAVVGRIMLP VYRDHPPDAD PANWRRLARL
301 RAGVTLGVGM PLVAVALAGP QLVDLLYDPR YQLAGPMVTL ISLAFIPQLI VVTYDIVALA
361 RGDSLSYFAL MLVRALMQVG AILLGLWAFG MLGAILSLAA ATLATYPAVL WLTGKYGARD
421 LRHDIIAIVL GGIAAVAVIR FHWAEIAPLV PL
SEQDB ID: 3101377AQH
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIIAYVLNTY PQPSHSFIRR EIQALERQGH QVVRLAMRRA EAPLVDVRDR AEAEQTSYVL
61 DRRVLGLGGA LLRRFLRAPG RGLAALRLAL RCGRASSSGM ARHLIYLAEA AEVANRCETD
121 GVGHIHAHFG TNSATVAMLA HALGGPGYSF TVHGPEEFDA PGALSLGEKL DRARFAVGVS
181 QFGRSQLCRW AAFDSWDHLH VVHCGIEPEA FADPEPAPEG PLRLVSIGRF VEQKGQMVLV
241 HAMVRLVRRH PQVHLDLVGD GEMRPALERA IAKAGLQGNI TLTGWLDQDG VRAALDRAHA
301 LVMPSFAEGL PMVVMEAMAA ARPVVATYVA GTPELVLPGE TGWLVPAGDD AALAEALAGL
361 AETPVARLQA MGETGRARVL TRHAIDDQAG KLADLIASFE G
SEQDB ID: 3101377AQJ
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRWLSVILP AHDEAEWIGA CARSVLASDP LPRGWRGEVL VVANGCSDDT AARARAFADQ
61 AAARGWDWQV LELAEGGKLG ALTAGDAAAR GELRAYLDAD VQLDPALLAR LVAALETEAP
121 RYASGAPRVA RAKSPITRLY ARFWQGLPFV TTGVPGFGLF AVNTAGRARW GDWPDIISDD
181 TFVRLSFTPQ ERLRVEAGYD WPMVEGFANL VRVRRRQDAG VAEVARLYPH LMKNDDTPGL
241 GLGGLLGHLL RDPLGFAVYA TVAIAVRTPL YRPRSHWDRG R
SEQDB ID: 3101377AQK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWISSLIGI LFIGHSLFGP TNPQMLSQVL QGRDVRVAAQ IINGAPLSYQ WDNGAKAEGV
61 NARSVLPGGG FNVVILTEGI PLANQMQYND SIGSARRYYD LALSANPDTR VFLQETWHDL
121 RSGSGVDIPY DEGDDVPWRE RIEADLPRWQ SIVDGVNATR PEGASPMQLL PAGQAMLALT
181 DAIAAGTVPG IDRIAQLFSD DIHPNDLGFY FLTMVQYAAV TGESPVGLPR RLQDRWGKAY
241 DTPERALAQR LQEVAWTVVQ GFEAPEPPAP QPVAPPDEPT SEPAAAEQAG EPAEPRQGFV
301 APPVPEGTVP VAIGLAGVND WSVQQPFLDV FKTARPWIGH LPRQWGGVDH AQLQEAGYLD
361 PQGWVMAIPP ELGSVGTLIL TDLPEEAVST AGRYVLRFAG QGVVEVSGRA GNVRYGKNSV
421 SFDFTPGPGS VDIRIQRTHR GGDYVRDISV VKEEHLAAYQ AGGLFNPLWL DRLMGFRALR
481 FMDWMQTNDS QQSAWADRPR PEEFTWAMKG VPLEVMIELL NRTGADGWFN MPHLADDDYI
541 RRFAEMVRDD LWVEQRAYVE LSNEVWNWQF TQAQWAEDQA RARWNKKDHW VSYYATRAVE
601 MADIWAQVFG DQAEARLIRV ISTQTGWLGL EEMILDAPIW TAEEPGRATP ATHFDAYAVT
661 GYFGGTLGWE DRLPLVRQWL VDSHAAAEAQ ADAQGLSGAA RDDYVAKHRY DLASALAWAE
721 VRDGAASGKV EDTLLGNLGE RLPYQAEVAR RYGLDLIIYE GGSHVVGSGP LVDDAELAAF
781 LMHFNYTPEM GELYTDLIRG WHALGGGLFT AYADVYRPNK WGSWGHLRHL DDDNPRWDAL
841 VEFLK
SEQDB ID: 3101377AQL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRVVLPTLL ILAILSAGLW WGWLRPRLPD SGAIDAAYAR PLPPPAGPMR VFHLGHSLVG
61 QDMPAMLQQL APPGHDYASQ LGWGTTLKAH WEPDEGINGF DQMNDHPRYR AADSALRSGS
121 YDAVVLTEMV ELTDAIKYFD SDRYFSKWAG LARQARPDTR VFLYETWHWL DDPDGWLNRL
181 DRDLVTLWEN EILLRDLARN PDNPAHVIPV GQVLSRFVRA LEARGGVPGI DGPEALFARD
241 DQGQLDPIHM GDLGNYLIAL THYAVLYQTS PVGLPHQLNR ADGSPALAPS PEAARLMQDT
301 VWQTVTSYPK TGVPQ
SEQDB ID: 3101377AQM
Reference:
3101377
Name: phosphopantetheinyltransferase, Isotype: PptA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGAAASGAL MLAAPLLDRR VALAATDPAG PYEAYPEELA ALPRATEKRT REFAAGRAAA
61 RLSLRELGAP ALAIPMGADR APVWPPGLLG SITHTDTACL AATAWEGEFR LLGLDMEPDT
121 PLDADLLETV CTPAERAWLA TQDEAGHWAK LIFSAKEAAY KAQHRLSHAL IGFDALELRI
181 DAPGQSFVAT FQSDVPPFVR GEALHGRFAR GGGLIVTALA VAA
SEQDB ID: 3101377AQN
Reference:
3101377
Name: nonribosomal peptide synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLSHVVIGN ESLLIGCSEM LLDRGHKIAA VVSTDAEIAA WARGKGLAHM RDLSDLDRHL
61 AGAGFDWLLS IANLRVIPEA LLALPRQGAI NFHDGPLPRY AGLNTPAWAL MAGETRYGVT
121 WHLIEGGIDE GDILAQQMFD IAEDDTAFSL NSKCYGAALD SFARVAGQLE QGLERQAQDL
181 SQRSYFGRDA RPAAAGRLDF TKPAATLAAL VRALDFGDYA NPLTCAKILA GGRVLAVGRA
241 RAEGRSGALP GTVLSSSSDS LTLACGEGDL VLSGLRALDG APVDLAALVP EGQRLPALSA
301 AESAALDRAL AAALPAERHW RLPLAAMRPL PVPLAGSSAP GIPGPHRISV PHGLDDAALM
361 AAVVVWALRS SGEEFGDLAL TTGAMQQAAA EGYINGWVPL QAALTSTRAD LIGWIEQTVE
421 AARAKGAPPA DLLLRDPRIA HRDTPQVALA LDGAGPVPGA ALTVALDRGQ ATLFADAARL
481 DPRRTEILAR RLETAMHAMG RARATDTAAA LPVLPASERS TMLSDWNRSA RDYDRALTVH
541 RAFEDQAART PEAPALVFEG QTLSYAALNA RANAVAARLR EMGAGPGSHI GIYLDRSPEL
601 LIAALAALKA GGAYVPLDPA YPADRIAHYV SDSRAAIIVS TGTRAQSLPK TQAQILDLGP
661 LAGARQPENV DGCASADDLA YVIYTSGSTG TPKGVMVEHR NVANFFAGMD DRIDHALGGV
721 WLAVTSLSFD ISVLELFWTL ARGFKVVLSS DENRAEVSKG PIAVSDRPID FNLMYWGNDD
781 GQGPKKYELL LEGAKFADAH GFNAVWTPER HFHAFGGPYP NPSVTGAAVA AVTKNLSVRA
841 GSCVAPLHHP ARIAEEWAVI DNLTGGRAAL GIASGWQPDD FILRPENTPP RNKPAMFETI
901 ETLRRLWRGE AVEFAKADGT MHSVVTQPRP VSKELPLWVT TAGNPETWRE AGSIGANVLT
961 HLLGQSIDEV AEKIRIYHAA LREAGHDPAG FKVTLMLHTY LADTREEAAR IAREPMKDYL
1021 RSAAGLIKQY AWAFPAFKKP KGVTNAFEMD LGVLSGDELE AILDFAFERY FEDSGLFGTI
1081 GDAVARVEQL KRIGVDEVAC LIDYGIDPAV VLEGLKPLAE VLRRVRAPSA LAEDDFSLAA
1141 QIVRHGVTHM QCTPSMARMI AMNDEARLAL GRVKHLLLGG EALPGDLVED LREATGARIL
1201 NMYGPTETTI WSTCALVPPR AEGTVDIGQP IANTTVYVLD GSGQPCPIGV PGELHIGGEG
1261 VTRGYWQRPE LTAERFPRDP FAAEAGLTVT AAPQMYRTGD LVRWRADGQL DFLGRSDHQV
1321 KIRGQRIELG EIEAAMAAYP GVTGAVVIAR EMGGDTRLVG YVTTGGPVSD AALRAHLAAR
1381 LTEVMVPAHI VTLDAFPLTP NKKIDRKALP EPVQQRAAPS APSEPASGAE AQIAAIWSRI
1441 LGVGDIRADD NFFTLGGHSL LAVQAHREIR AALNVPNLPI TDIFRFPTLG GLAAHLSQGS
1501 APDEPTPPAV DSEERASTMS RRRAMRASRQ ERVR
SEQDB ID: 3101377AQP
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSATVLTVI LNYRTPDLTI SACEAAMREM QGLPGEIVVV DNASGDGSFE KLSKAASDYG
61 WLASGKLRLV QSGRNGGFGA GMNVGMTAGL SNGAAPDFYY LLNSDAWPDP GCIRGLRDFL
121 LETPDAGLAA SAVRGIDDDP HRTAFRFPTA AGEFEAAART GPLSRLLRER IIAPPLPARR
181 TRVDWASGAS LMIRREVIAA TGGFDERFFL YFEETDLCHR AQAEGWSTHY LPDVGVVHIG
241 SASTGMKSWN RTPQYWFDSR LHYYLKTHGR AYAAGATLAL VAGAMIWRLR RLLQAKPQAD
301 PDRFLSDLVT HALRAALGRP RTAPAPIAAI PEDSR
SEQDB ID: 3101377AQQ
Reference:
3101377
Name: nonribosomal peptide synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATSETQFEQ EDIAIVGMSV HVPGAQSAAE FWRNLRAGIE SIRVLDDAAL LEAGERPDRL
61 ADPNYVRAAA PLDGFDRFDA DFFGFSPKEA AILDPQHRQF LETAWEAMED AGHPPETIAG
121 PIGVYAGCGM GSYFYFNICS NPGLVDDVGM FLLRHTGNDK DFLSTRVSHV FDLRGPSLNI
181 QTACSTSLVA IHYACKALRE GECDMALAGG STIELPQGRG YLYKENEILS PDGHCHAFDH
241 RAQGTVFGSG AGVVALRRLE DALADGDHIW AVIKGSAINN DGADKAGYLA PSVGGQAQAI
301 SAALKAADVP AETIDYIECH GTGTYLGDPI EVSALTQAYR EQTAESGFCR IGSVKTNIGH
361 LDTAAGVAGF VKTALALHHK QIPPSLGYEA PNPAIDFETS PFRVNDKLTD WTPHKGPRRG
421 AVNSLGVGGT NAHVILEEAP ERAASDESDF PFQILCLSAR SRAALDGNAK ALAGWLRANP
481 DVNLADVAYT LKEGRRGFEK RRVLVAETAL EAADLLDQGD PRRVFTHDAL GAGADVVFMF
541 PGGGAQYAGM ARDLYEVEPV FAEWMDRGLA HLQQSLDYDI RAIWLPDGDT AEADAKLQQP
601 SVQLPLIMIV EYALAQLWLS WGVRPAALVG HSMGENTAAC LAGVIAFEDC IDLVLLRGRL
661 FDTVAPGGML SISLPLDEVQ ALIGEDLDIA SVNAPRLTAV SGPQAALDRL AAVLKAREVE
721 YQRIQIDIAA HSRMLEPILK EYGDFLRGLT LSAPQIPIQS NRSGAVLSEA EATSPDYWVA
781 QLRNTVHFAD CIAGLSSDPD RVFLEVGPGK ALSSLAQMCP GVTPGQVLSS LRHPDQEIAD
841 DAYFLGVIGR LWACGVEADW PQIWGEAHRR RLPLPTYAFQ RSRYFIEPGT RQAEAPRALP
901 ARSDDLSQWG WRPVWRPRLA DCDIDTATEL AEAAPRNWLF FMDETGLAEA AAQRLEGVGH
961 HVTRVRSGDS YARLTDGSYT LAPEQGRMGY DLLLRDLDEQ QRLPDRIGHF WLVTEAERFR
1021 PGSSFHDRNM EHGFFGLTWL AQALGQVDLP GALHITVFTS GAARLRDEGL AYPEKATIAG
1081 PMGVLPHEMP GLTCATVDIE LPARLRPPLF ARLRGAAPEQ DEDLTPALLE ELLVEPGNAF
1141 AARRDGKRYA RSYRPAPLTD AGPAFRDGGT YLITGGFGGI GLTLARHLMD HHGANVILLG
1201 RDPLPTDPAA WLAGHSPADR TSRRLRALAE LEALERGEVM AIAADVANID QMRRALTLAE
1261 DRFGALTGVI HAAGHIADGP ALAKTEADLH RVLSPKMTGL RVLDELFPDG VLELMVLCAS
1321 SSTASRPAGQ VDYVAANEYL NAFADSRQGG ATRVVAVNWG VWADVGMAAD ARAARLGTGH
1381 DTARSPTGLP LLHEAGFDEA GNRLFVSRLS AEDWVFDEHR TADGTALLPG TGYLELAAQA
1441 LHAQGITHPY DIRDLYFFRP LRVNGTPREV VVRLEDAPDG VAFSVWSALP GGGYAQNAQA
1501 RLVPAPGAQA EPLDLAAIAT RCPEAQSAAP NAVLHSPQER HLQFGPRWQV LRATARGTGE
1561 GLARLALPEA YRGDLDKGYR MHPGLLDLAT GWAIELAAGY DDTTLWVPVS YRSIRVHAPL
1621 PAEIRSWMRL TPDQASVAGH ASFDITLSDA TGAVLVEIEG FQMQRTSGTI DLSDPERPDA
1681 DARALGLEPA RQSTPLSPEE QRLHHNIAQG IRAEEGAEAL VRALGTGLPQ LVVSSLDLPR
1741 LIAEADQVAA PAEAGQSFDR PELDTDYVAP ATETEKTLAG FFETLLGVSK VGTQDSFFDL
1801 GGHSLIAVRL FAQINRAFAV EFPISLLFEA PSVEAIATRI DARLGRSGTG DSPETAEASA
1861 PDLTHVVPLH QAAGGHASPF FVVAGMFGNV LNLRHLALML GRDRTVYGLQ ARGLVGEDAP
1921 HETIPEAARD YIAEMRQVQP HGPYLLGGFS GGGIIAYEIA QQLRDAGEEV ALLVLLDTPL
1981 PQRPPLGRSD KALIKLQQFR ERGPRYLVDW VKARFAWEVQ RRRGPAQDSG GGAFNNTRIE
2041 AAFLRSAAGY ALRPWEGATV LFRPPLERLW QVSGGNWVNH ERHYVYPDND WGRWIAALEV
2101 IEVPGDHDSM VLVPNVSVLA EHLRGQLNAI DKPGALPHAA E
SEQDB ID: 3101377AQR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIRMRPIRQ EQMPNPVAYL MLMLWPIACA FLFTRLPLQR AIIWGILGAY LILPPVAEFD
61 LPLVPSMNKD SIAAVSTFLA CLFVARKRVP LIPDSWPVRV LLFSFVLCAV PTVLTNREPL
121 IFEMAMQAEP IRFFTNYVPG MGLRDLLSII LSQLIILLPF FLGRAHLADE AGLRNLVLAM
181 AVAGLAYSLP SIFEILFAPV LNIHIYGFFQ HDFNQMIREG GFRPIVFMPH GLWLAFFMTT
241 AVLSVAALTR HSRAKIRERW AGALIYMLLV LNACKSLAAL GYGLALTPVV LFLRRKAVLR
301 IALGIAALAI AYPALRNIGV IPLDAILERA AAISAERAQS LEFRFTNEEQ LLDRAHLKPW
361 FGWGGWNRNL VLDDETGLII TIPDGAWIIA FGTFGWLGYI AKMGLLAAPI AMMTWQSRKM
421 KSAEISDFAA PLALILAATM TDMLLNDTLT PFTWLCAGAV LGYVEQLRRP VAEPGRRQQA
481 RAPVLGRHVP SDETRPVL
SEQDB ID: 3101377AQT
Reference:
3101377
Name: glycosyltransferase, Isotype: WecB/TagA/CpsF-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEFSFGTDRV SVNMPTREAL MGEVGRRFRA GEGFALATIN LDHLVKLGCD PVFARAYAGQ
61 DLVVADGRPI VALARLAQRP VELMPGSDLV RPLCALAAAE RVPVALVGSS DEALGDAKRV
121 LEAETPGLDI AWTHAPEYGF DPEGAAAETI LMELATRRIG LCFLALGAPR QERLALRGRA
181 LAPGVGFASV GAGLDFLGGH QRRAPLWMRK LALEWLWRML SDPLRLAPRY ARCAAILPGH
241 MVRALRLRGR
SEQDB ID: 3101377AQU
Reference:
3101377
Name: oxidoreductase, Isotype: gfo/idh/MocA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTPPLRIGL IGAGYIAAWH ADALRAVPGV KLTAVCDPNM DLAEGLAAAH GARAFGDLDD
61 LIGAGLCDGV HILTPPDLHH PLALHCLRAG LHVLVEKPVA LNAAQTQEIE DAARAANRRF
121 HAGHNFLGLP SYTRLKREIR RGALGRVSGA EIRWCYPFGP LRAGPFGIWP LRDTRNLMLE
181 FGPHLMSLVI DLFGLPEIEH VALSKPVALP GAGTRPQGWR ILARAGEVEL VLILSLVETA
241 DDRSVTIRGS SARARLDLAA DTLVIDAENT ADLVANPLLR QLSLARQHLV QGSVNAARQL
301 TSFNRKSPYA LSFRGLANGI WEPLAQNAPA DPRWSGSSAV AVMTALDAVL ERVDWPAPVP
361 ASPSRKPAPS AMVIGGTGFI GRALTRELVA RGSDVRVISR GRQGSFADLP DQVETVSLSL
421 RDTEGLARAM AGIDTVYNLA RSTDSSWEDC LQNDVAVAEG IGKAALAAGV RRLVYTGTIA
481 SFDMSDPAAT ITDATPLPDE MDERNLYARS KAECERRLMA LHRQSALPLV IARPGIVLGA
541 GGPLQHWGIG RWHGAGAVRL WGNGRNPLPF VLIGDCVDGL IRCAEAEGIE GRAFNLVGPP
601 ILSARDYFDA IHDRLGARIR VSGGNLSLMY AADWVKFQLK TRVLGRSGLT RPSRADWLSR
661 AHQSRFDISG ARSALGWHPV SDADAFLTNA VDEAGLLGF
SEQDB ID: 3101377AQV
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVDLVLIGR NEGERLLRAL RAARGQARRL IYVDSGSTDG SVAAARAAGA LVVELDMSIP
61 FSAARARNAG FEAAQAKDPA PFVQFIDGDC ALVPGWLAAA EARLSQDDAL GLVTGWRSEI
121 APEASLYNRI CDHEWRRPAG PIVACGGDMM VRAEAFAQAG GFDPTVIAAE DDDFCLRLAR
181 AGWQLERLPL EMTRHDAAMT RFAQWWRRAV RAGHGFAQVG LRHPGHFRTE QRRVLAWGLV
241 LPLIALLGAT RGPVVPVLVA LLYALSWLRS AKGLRAEGMP APEARKQAFL LTLSKFPNLI
301 GMGKYWLTHL ARRRPRIIEY Q
SEQDB ID: 3101377AQW
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRITFLSPRS NLSGGLRVIA IYARMLRARG HEVTLVTPAR AQPGRRQKLR ALLRGQASNS
61 PEPPGHLDTL DLPVIETARA DFHVDPDEIP DADVIVATWW ETAFAAAAMP PEKGRKFYLI
121 QHHEVHDFLP WQISRATYYL PLTPIVISNW LDGILRRTYG RDDARLVPNG IDLTQFHAPE
181 RGKAARPTVG FLYSPHPIKG SDTALAAIAL LRQRFPDLHV VAFGAEPVTP DLPLPPGADF
241 HLRPAQERIR DIYAACDVFL CASTAEGFFL PLLEAMACRT PLVSTRVGAA EDLIEPGVTG
301 YLADVGDASA LAEGAAHILS LPDGEWRAMS ARNHKIAQGQ SWDHACDLLE SVLSGEGRS
SEQDB ID: 3101377AQX
Reference:
3101377
Name: xylulokinase, Class: EC2.7.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xylB
Sequence:
1 MFIGLDLGTS GVRAILVRPD GSVLDSAEAG LQASHPHPGW SEQDPDDWLS AARAALVALA
61 QRHPLAMGRV AGLGLSGQMH GAVLLDAAGA VIRPAILWND SRSFAEAAEL DRTEAVRDLS
121 GNIVFPGFTA PKLAWLAKHE PRSFARVAKV LLPKDYLAFW LTGILGSEMS DAAGTAWLDV
181 GARDWSDRLL EAGSMRRDQM PDLREGTGTV GPVRPDLAAD LGLPDGVQVV AGGADNAAAA
241 CGVGALAEGD GFVSLGTSGV LLAARNGFHP DPASAVHTFC HAVPGRWYQM GVILAATDSL
301 NWLARITGAK APTLTAELGA LGAPGPVRFL PYLSGERTPH NDAAVRGAFL HLDIAQDRTD
361 LTRAVVEGVS FALRDSLDAL RATGADLPRL LAIGGGTRSR YWVELLATVL GLPLDLPEQG
421 ENGAALGAAR LAICGVTGAD PAQVMTRPAV AETIDPRADL LEAYEQAHAD FAATYPKLKA
481 LP
SEQDB ID: 3101377AQY
Reference:
3101377
Name: xylose isomerase, Class: EC5.3.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xylA
Sequence:
1 MTEFFADIAP VRYEGPDSAN PLAFRHYDPD EMVMGKRMED HLRFAVAYWH SFAWEGGDPF
61 GGQTLIRPWH PQDDMTRAKV KADAAFEMFD ILGVPYFCWH DADIRPEAAT FAESLRNFEE
121 IIDHFLAKME SRRTRLLWGT ANMFSHRRWM AGASTNPDPD VFAYAAATVK TCLDATQRMG
181 GQNYVLWGGR EGYETLLNTD MGRELDHMGR FLSMVVDYKH KIGFKGAILV EPKPQEPSKH
241 QYDFDAATCI GFLRKYGLEG EVKLNLEQGH AILAGHSFEH EIAVAASEGM LGSIDMNRND
301 YQSGWDTDQF PNNVPEVALC YYHILRAGGF TTGGTNFDAK LRRQSLDATD LIAAHVGGMD
361 ICARGLKAAA AMIEDGGLET ALRDRYAGWD SDHGQGILES DLDSLFARVL AGEIDPQPHS
421 GRQEMLENHV NRFV
SEQDB ID: 3101377AR
Reference:
3101377
Name: 3-deoxy-D-manno-octulosonate cytidylyltransferase, Class: EC2.7.7.38
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kdsB
Sequence:
1 MSVLIAIPAR YASTRYPGKP LVSLTGASGT EMTLIERSWR AAMAVSGADR VVVATDDDRI
61 RAVAEGFGAE VVMTSSDCVN GTERCAEAHA VLGGGFDIVV NLQGDAPLTP HWFVEDLIAG
121 LRAAPEADIA TPVLRCDGMA LNGFLNDRKH GRVGGTTAVF AADRSALYFS KEVIPFTSQI
181 YADDAPTPVF HHVGVYAYRP GALADYPTWP MGPLETLEGL EQLRFMENGR KVLCVEVEAR
241 GRQFWELNNP EDVARIEEMM AAMGLD
SEQDB ID: 3101377ARA
Reference:
3101377
Name: aldose 1-epimerase, Class: EC5.1.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: galM
Sequence:
1 MLEGGDVSVA ILNRGCITQD WQVPLRGTRV PVVLGYADPA DYAHNPAYLG VIAGRVANRI
61 SGAAFTLDGQ RYDLPANEAP NHIHGGPEGL HTRLWEMEAD GARAVRLTLV SPHGEGGYPG
121 RLDLTVTIRL EGDALTYDIR AVSDRPTLLN LAQHSYYSLG AETCRDFHVT LPASRHTPND
181 AARIPTGEIV PVTDRPFDFR NGRSIAEADP ERQGLDMNFV LDRGQARVTG NGLVLEIETD
241 QPCLQLYSGQ HLNPLHPPLP GQSHAPFAGL CLEPQGYPNA VNTPGFPCPL VTPDHPYRQR
301 TTVRIREQDA A
SEQDB ID: 3101377ARB
Reference:
3101377
Name: methylamine utilization protein, Isotype: MauG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLVALLTF VAGPLLAEPL PRADAIFAEP AMEAVRLGQL LFYDPILSGN RTISCASCHH
61 PRFGTSDGVS LGLGDGAVGI GPDMRLDPQN PPEQRIPRNA PALFNLGAAE FTRFFHDGRL
121 ESDPTRPSGI RTPLGPDMEQ GFASALAAQA MFPVLSGDEM AGHYSENDVA QAVRQGRLTG
181 PGGAWAILAA RIEAIPDYRR SFDAVIGPRP VTFADIANVI ADFMVFEWRA DDSPFDRFLR
241 GEGDLPEVAK AGMDLFYGKA RCATCHAGQF QTDHAFHAIA MPQIGPGKAA RFERHNRDIG
301 RMRVTGDPAD AYAFRTPSLR NVTATAPYGH SGAYASLRAV VEHHLDPVAS LEAYDIASAL
361 LPGPGFASDR AVLDDPAEMA AIAASNRLEP IRLTEAEVDA LLAFLDTLTD PVALSGRLGI
421 PDSVPSGLAV AR
SEQDB ID: 3101377ARC
Reference:
3101377
Name: FG-GAP repeat domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPELFALAL GATPAVAEPM FHPVPVPEHV YAGGWEHFVG GGLAVFDCDG DGLPELLAAG
61 GENPATLLRN RSDAGALRFE ADTPEALTEP GMTGAYPLDI DSDGTMDLVV LRVGSNQLLR
121 GGADCSFAPF EGLGFTSDDR WTTAFSATWE TGQSLPTLAF GNYVDRSNPN GPFGTCDTNL
181 LYRPEGDRYG PPIELTPGYC PLSMLFSDWA RQGRADLRVS NDRHYYVSDG EEQMWAIGST
241 PRLLGPADGW LSHKLWGMGI AQRDLDRDGR QEVFLSSMGD QRLQRMTGNG AEFTDVPYAM
301 GTTAHRPYTG GDGRPSTGWH IGFGDVQNDG LDDVFITKGN VEQMPDAAME DPNNLLIQQP
361 DGTFAEAGDR AGIASLHRGR GGALVDLDGD GRLDIAVVNR RAPMEIWQNV TPETGNWLAL
421 ALEQPGPNRA AIGGWIEVTT TGAPQLREIM VGGGHAGGMA GFEHFGLADA GEIGIRVIWP
481 DGAKSETVYV GPNQALTLIR TAKGLKARR
SEQDB ID: 3101377ARD
Reference:
3101377
Name: xylose repressor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQREYGRRTL LHQIRRAGRI PRIELADLTG ISRATVTTIT AELLSRGLIE EVQRDESGPD
61 SRRGRPRVDL KIRGAAHLLV GVKVSHHKLS LVLLDFEGEQ LAAKECDLPA PVNAPEALAD
121 AIRDAVAHLA TTAGRRAEEI SGVGVGIAGI VEATDGFVHW SPSLSVRNVD LGALLTRTLG
181 TPCFIDNDAN LVAVAEQTFG LGREHKDFLV VTIESGVGLG MVIGGALYRG TRGCGAEFGH
241 TKVQLNGALC RCGQRGCLEA YVADYALLRE ATLVSGLPPT GDPGTRIETL LDAARTGDAT
301 ARSILDRAGQ IFAMGLANLV NIFDPELIIL AGEQMQLDHL YADAVIEAMR KSIVQVDKPP
361 PEVVVHKWGD LMWARGAAAY ALEQVSELAL DRLDEDAA
SEQDB ID: 3101377ARE
Reference:
3101377
Name: xylose ABC transporter, Subunit: periplasmic xylose-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xylF
Sequence:
1 MKLFATAAAV IAGAVMSTSA LAQDVVVGVS WSNFQEERWK TDEAAIKAEL ESKGAKYISA
61 DAQSSSAKQL SDVESLIAQG ATALIILAQD AQAIGPAVQA AADEGIPVVG YDRLIEDSRA
121 FYLTFDNVEV GRMQARAVLE AAPSGRYVMI KGSPTDPNAD FLRGGQQEVL QAAIDKGDIT
181 IVGEAYTDGW LPANAQRNME QILTATDNGV DAVVASNDGT AGGVVAALTA QGMEGLPVSG
241 QDGDHAALNR VAKGTQTVSV WKDARDLGRA AARIAVSLAE GTQMNAIGGA DDWTSPGGTK
301 MNAMFLEPLP ITKDNLSVVV DAGWITQETL CQGVTNGPAP CN
SEQDB ID: 3101377ARF
Reference:
3101377
Name: xylose ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xylH
Sequence:
1 MTHSEAELSP AHPKKSFVQT LELDLRLLGM IGAFAILCVG FDIVTGGRFL TPRNIFNLTI
61 QTVSVAIMAT GMVFVIVTRH IDLSVGALLA TCSAVMAMTQ TEILPNMLGL GLGHPLIPWV
121 TILVGLLVGS LIGAFHGWLV GYLAIPAFIV TLGGLLVWRN VGWYLTSGKT IGPLDPTFMQ
181 FGGINGTLGA TWSWIVGLLA LAAALYGLWA SRKNKLRHGF PVKPLWAEGV LAALISGAIL
241 GFVAILNAYE VPLARLKRDF AAQGLTLPEG YTEAYGIPIS VLLLIFIAVG MTMLARRTRL
301 GRYIFATGGN PDAAELSGIN TRLLTVKIFA LMGALCAISA VVASARLTNH SNDIGTLDEL
361 RVIAAAVIGG TALAGGFGTI HGAILGALIM QSLQSGMAMV GVDAPLQNIV VGAVLVLAVL
421 IDILYRRKTG AR
SEQDB ID: 3101377ARG
Reference:
3101377
Name: xylose ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xylG
Sequence:
1 MMIDRTGTPL VEMRDICISF GGVHAVDHVS VDLYPGEVVG LLGHNGAGKS TLIKILSGAY
61 QMDSGEIRIN GDRAEIHNPR DARRYNIETI YQTLALADNL DAASNLFLGR ELVTPFGLVD
121 DDAMEAETRK IMARLNPNFK KFNEPVSALS GGQRQSVAIA RAVYFDARIL IMDEPTAALG
181 PHETQMVAEL IEQLKAQGIG IFLISHDIHD VMKLCDRASV MKNGQLVGTV DVDKVTDDDL
241 LGMIILGKHP GEQAEA
SEQDB ID: 3101377ARH
Reference:
3101377
Name: glucokinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVLVADVGG TNTRVALASA GQLVHLARFA NDAYGSFAEV LTAYARGRDL PGLRGVCVAV
61 AGPVANGRAE LTNRNWHFDT AELAAPLPGQ GDVAARLIND LVALGHALPG LTAAQLDVIR
121 AGAVQPSNDQ ALVAGLGTGF NTCLLKGGAV VEAELGHASL PLAIAEELRA QLGDAAGGFR
181 TNECLFSGRG LSRLHAILSG QDRRGQDILA DYAIGEDPQA AATVTLTARL LGLFARELVF
241 QYLPFRGIHF AGGAARGILG SAARAEFLSA FEADGRFADH LDRVPVRLIA DDAAALSGAA
301 RLMEECA
SEQDB ID: 3101377ARJ
Reference:
3101377
Name: oxidoreductase, Isotype: gfo/idh/MocA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMSAPLFRW GILSTAKIAR EQVMPAIARS ETGVIHAIAS RDAGRAQAQA ARFSAARWYD
61 GYDALLSDPD VDGVYIPLPT AQHVEWAIRA AEAGKHVLCE KPIALRAEQI DRIIAARDAT
121 GRVVSEAFMV WYHPQWHKVR DLIASGAIGA LRQVTGGFSY HNTDPDNMRN RPELGGGALP
181 DIGVYPVVTT LLATGGEMRR AEARVAYSPE FGTDILARAT VGFDGFDLDF HVATQMAAYQ
241 SMLFFGETGW IDVRTPFNAG LYGFDEVVLH DQKALSRQVF RFPGINQYEA QVDAFVRATR
301 GAGAVFPLEM SRRVQEVIDA IYAAGTPRRA
SEQDB ID: 3101377ARK
Reference:
3101377
Name: gamma-Glu transpeptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFTTRPEIA GTFAVATSTH WIASAVGMGV LERGGNAFDA AAAMGFVLQV VEPHLNGPLG
61 DMPMLIKPAG DVVPTMVCGQ GTAPAGATIA HYRSEGLTRI PGSGLLATVI PGAFDAWMLM
121 LRDYGTLPLR DILEPAIHYA RAGHPALPRV AATIAGLAEF FRAEWPSSHE TWLPGGSAPR
181 AGALMKNPAL ADTWTRLLAE SETVSGREAQ IEAARAAFYR GFVAESIDRY LRHACVMDAA
241 GGRRKGVLSG EDMACWQASY EAPISTRYKD WTVWKGGPWT QGPALLQSLH LLDGFDLDAI
301 DLNGAEFVHL VSEAMKLSFA DREAYYGDPE HSDIPMSALL SARYGEARRG LIGERASTEQ
361 RPGLVEGYES WVAAALRHAR EDYASAGGTG AGEPTMAHLS QRKGDTVHLD VIDRWGNMVS
421 ATPSGGWLQS APVVPGLGMP LNSRAQMFWL EEGLPTSLAP GRRPRTTLSP SMARGPDGTE
481 LAFGTPGGDQ QDQWQLIYFL RLVHGGLNLQ EAIDAPLFHT NHFQSSFYPR EVQPGHLMVE
541 PALGEAAIAE LRARGHRVEV AEPWSVGRLT AASRLSDGTL RAAATPRLMQ AYAIGR
SEQDB ID: 3101377ARL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPVVYPLAF ALTLSSAVAQ TQSLEESGGL LVDFLEDTLS GEGRNIRVRG LSGALSARAT
61 IEEITVADAD GVWLTIRAAE LDWNRLALLR GRFSVNTLTA AEIDIARAPL PAPAELELPD
121 AAATPFQVPE LPVAVELGEL GVETLTLGAP LLGVAATLSI GGNLTLADGA LDTTLSVTRL
181 DRPGDKVDLV AGFANETRQI TLDLTLTEAA GGLIATTLAI PDAPALMLSA KGAGPVDDFT
241 ADIGLSSDAV ERVSGQVRLR GTGDDTAPGI AFAADLGGDV TPLLDAAFDP FFGADTRLGI
301 EGVSLADGAL RLDRFDLRSD ALDLSGALAL AAGGALERAV LDGRITPPDG TRVTLPVPDQ
361 RITLGAARLA GRYDRAQGDG WSLNLSAEAL DTPDLRLDLA RIDASGTLTP GAGGPTLAGR
421 IEAALSGMGF ADPALNSALG TALTLEGGFE LPPERDLSLS GLTLRGADFT ATADAVIDGL
481 TSGFEMDGTV SLTATDLSHF SGLAGRDLGG VAQARLTGTG APLSGSFDFV LDVDGRDLKT
541 GMAEADPLLT GNSRLHLDAL RDDTGMTVRK LTLDAAAGRI TAQARVTQPG GELALDGSLR
601 IDTPDLAPFS ALAGRPLSGG AVADITGNVA RLGEEFDLSI DLSGQNLSSG MAEIDPLLAG
661 ASRIGLDARR AGNSLTLRRF TLDAPVLTAQ VQGEVTGLTT EAVFDGTARI EAPDLAPFSA
721 LAGLELGGRI RAGLEGRSAL NGERFDLSLA LDATDLRTGI AQADALIAGQ TRLEFDGSRD
781 AGGMDIRHFD LDGSALSAEA SGAFRGTGSN LRFAARLDEL SRVTPSVSGP LQLSGTLSPT
841 ATGLRSEVEL LGPDSSFARL NGTVDTDGAA DLAFDAELAR LERFVPDLAG ALKAVGTATR
901 ASGIWTVAGN ARGPAGITAD VAGTFDEAKG AADMTATGQL SLGAANKALA PNKIEGTARF
961 DLALRGTPGL GALSGTITTA ESALAIPDLG QTITGIGGTV TLADSAARID IRGGVRAGGG
1021 FTVSGPVSLL PPFDGQIAVR LNDLVLTDNL SYDSRLGGQI TLSGPLTGNS RLAGQIEVGE
1081 TNINLNTASG AVGAAPIPEG MVHQREPAAV RATRQRAKLI DSGNGNGGRT SMALDIAINA
1141 PGKVYARGRG LNAEMGGRIH IGGTSAAVVP SGQIGLIRGD FNILGRRLKL TKGVVTLQGD
1201 LTPYVEFAST ATTSEGQATL RIIGPLDQPE VRVTADPDRP SEEALAMLLF GNQFSQLSPF
1261 VIAQMAASLA TLSGHGGDVA KGARDKTGAD TVEIGTDAGG VGRLGAGAYL SDNLYTDFTV
1321 NIEGDTEVNL NLDVTDNLTL KGMVDNAGDT SLGIFFERDY
SEQDB ID: 3101377ARM
Reference:
3101377
Name: outer membrane protein, Isotype: OMP85 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLTGPLGAR LRGLVTAGLL LVPVNASALE AVLTAPGASE ELQDRLRQSS AALSASARGQ
61 DSPLELLSSA LSDYRTLVQV LYDAGHFSPV VHIRLDGREA AAIDPFSTPA RIERIEIAVD
121 PGPAFRFGTA RVEPLSAETR LSDAFAPGQP ATTGAIRDAA QTGILGWREA GYAKARIGDQ
181 RIVVRHAPAE LDAEIRLLPG PKLRFGQMVV QGDSDVRPEA IARIAGFPSG QVYSPDQVQR
241 VGTRLRRTGA FALVSLTEHE NPNPDGTLDF NATFEDLPKR RITFGAELSS RDGLDLSAIW
301 IHRNLFGAAE RLRLEATVRN IGGTEDIDGR IGFRLDRPDR LGPDDSIFYI GEAERRNRTH
361 YQITRAVLGI GARRTFSDTL YAEAGVGFNY GDADDAYGSG RKFRYFGLRS TVEWDKRDNK
421 VSATRGFYLN AGLDPFIGLS GSKSGARLTA DGRAYWDFNT EGRFVLAGRL QIGSVLGPSQ
481 SEISPELLFF SGGAGTVRGQ PYESLGLPVG GNIAGGKSFV GLSTEVRGKV TEKISLVGFY
541 DFGTVGASSF ITSGSDSHAG AGLGIRYDLG GLGPLRLDLA YPTSGNTDGG LQFYLGIGQA
601 F
SEQDB ID: 3101377ARN
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYDLAVFWDW LAFGVRWLHV ITAIAWIGSS FYFIALDLGL RKAPDLPPGA HGEEWQVHGG
61 GFYHIRKFLV APERMPEHLT WFKWESYATW LSGFALLMIV YWVGGELYLV DQSKAELALW
121 QGILISAATL SIGWLVYDRL CKSGLAERPT LLMLLLFVLL VVMGWALNQV FTGRAMMLHL
181 GAFTATIMSA NVFFIIIPNQ KIVVADLMAG RAPDPKYGKI AKLRSTHNNY LTLPVLFLML
241 SNHYPLAFAT QYNWIIAALV FLMGVTIRHY FNSLHARTGN PTWTWLVTAL LFLAIIWLST
301 APMHQPLEEA EAMPMTAQEQ RLAAAPGFDQ AHDVVLGRCS MCHAREPVWE GILWAPKGVL
361 LETEGDIARN ARAIYLQSGV SHAMPPANVT YMEPEDRAAI IAWYRAATR
SEQDB ID: 3101377ARP
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYLDNIRTF VRVYELGSMS AAGRDLRISP AVTSARISQL EDHLNVRLFQ RTTRNLTPTE
61 QGRAFYPGAV AVLDAVDEAE AQVMHLTEAP RGSLFVAAPL GLGRRLLAPN VPDFLAQYPE
121 IDIRLRLTDR TIDLTTEGLD LAFFLGQPED SNLRIRKIAD CRRVLCAAPD YVKRRGLPAT
181 GQDLITGRHE CLNLRFPGAT EFQWLLQTAE GPRRFAVSGR HECDDGDVLT DWALTGQGIA
241 MKPVFEVAEH LKAGRLVPVA VDTPPVTVQM ACLYTHRRHQ DPKTRLFMEF MIERVGRAVK
301 AAESAAA
SEQDB ID: 3101377ARQ
Reference:
3101377
Name: transthyretin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGYLTTHVL DTARGCPAAG LRITLCRIEN SARHKIVEML TNADGRTDAP ILPQESFSPG
61 IYELEFAAGD YLRATGQDGV EPLFLDVVPI RFGISDPEAH YHVPLLLSPF GYSTYRGS
SEQDB ID: 3101377ARR
Reference:
3101377
Name: polysaccharide deacetylase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPRYPRDM IGYGATPPNA NWPGNARIAV QIVLNYEEGG ENNILHGDAA SEAFLSEIVG
61 AAPWPGQRHW NMETIYEYGA RAGFWRLHRL MRDLPVTVYG VATALARSPD QVAAMKSAGW
121 EIASHGLKWV EHKDMPEEEE RAQIAEAIRL HTEVTGSRPR GWYTGRCSMN TVRLASEAGI
181 DYIADTYDDD LPYWKRIDGR DQLIVPYTLD CNDMRFATPQ GFNSGDQFFA YLKDSFDALY
241 AEGGEGAPKM LSIGLHCRLI GRPGRVMALK RFLDYARGHE DVWFATRLQI AEHWVREHPP
301 VARTRPSEMP KADFVAAYGG IFEHSPWIAE RAHGLELGPA HDTAGGLHNA LCRMFRSASA
361 EERLGVLTAH PDLAGKLAQA KRLTAESTSE QASAGLDALT DEERTTFTRL NTEYVARFGF
421 PFIIAVRDHD KASILAAFQR RIGNDRETEF AEACRQVERI AEFRLRDVLP S
SEQDB ID: 3101377ART
Reference:
3101377
Name: ureidoglycolate hydrolase, Class: EC3.5.3.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: allA
Sequence:
1 MSRRIVTEPI TVAGFAPFGD LLSVSGAPDK IINQGQCGRY HDRARLDFAD GRAGISLFDA
61 NPRALPYTLD MVERHPDGSQ AFIPMSHQPF LVIVAPDEDG RPGTPRAFVT EPGQAVNYHR
121 GTWHGVLSPL AAPGLFAVVD RIGPGANLEE FWFDDPWEVV AG
SEQDB ID: 3101377ARU
Reference:
3101377
Name: xanthine/uracil permease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADTSIGTPE QLRDPNYTPP LIKAVPLGIQ HVLAMFVSNV TPAIIVAGAA GFGFGSNSPD
61 FPELLYLIQM SMLFAGVATL LQTVTLGPVG AGLPIVQGTS FAFLPIMIPL VAGKGVDALA
121 ALFGGAILGG LFHFCLGFFI GRIRFALPPL VTGLVVTMIG LALVKVGIQY AAGGVPAIGT
181 PEYGSALNWS AALVVILVTL GLKFFARGML SVSAVLLGLI VGYVYALMVG MVTFEAIGTS
241 WSRAAGFALP VPFKYGFEFS LAAVIGFAMM AVVSAIETVG DVSGITKGGA GREASDNEIA
301 GATYADGLGT AVAGLFGGFP NTSFSQNVGL IAMTGVMSRH VVTIGALFLI LCGLVPKVGA
361 IIRTVPIEVL GGGVIVMFGM VVAAGVSMLS DVHWNRRNMV IFAIALSVGL GLQLEPGAVQ
421 HLPDTARILM TSGLLPAAVI AIVLNLILPQ ELGEEATEEV SGGMDGHGRR
SEQDB ID: 3101377ARV
Reference:
3101377
Name: glyceraldehyde 3-phosphate dehydrogenase, Isotype: I, Class: EC1.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gap-2
Sequence:
1 MKLAINGFGR IGRTILRQLL AAPRATDIDL VLINDIAPLD TCAYLFEYDS TFGPWRGDVA
61 TGADSLIVDG LAIPVTHSAD LARVDLSDVD VLLDCTGIAR SSDVAARGLS AGAGKVLISG
121 PSPAAEITVV LGANEALLGN ARIVSNASCT TNGLAPLARM IDDIAGITSA HMTTIHCYTN
181 SQPMVDAPRG DLARSRAGAL SMVPTTSSAT HLIDEVLPHL AGRISGAAVR VPTASVSAVD
241 LVVQLDRAMT PEQFDAALRA AVEASPVLGW TDKPLVSSDL RARPESLVIA GPETRMVGDK
301 QVRVFGWYDN EWGFSARMLD IARLMAV
SEQDB ID: 3101377ARW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHPSYYAPQ GGHPGQEQLL TDRAMFTQAY AVIPKGTMRD IVTSKLPFWQ GTRAWILARP
61 LSGFAETFSH YIMEVQPGGG SDRPDTDPGA QAVLFVVEGA VTLTLDGAEH VLEPGGYAYI
121 PAGHPWRLRN HAGPAARFHW IRKAYEAVEG IDPPTPFVIR EQDVTPNEMP GTEGRWSTTR
181 FVDPEDMRHD MHVTIVNFLP GGVIPFAETH VMEHGLYVLE GKAVYRLNQD WVEVEAGDYM
241 WLRAFCPQAC YAGGPGPFRY LLYKDVNRHM ALPRR
SEQDB ID: 3101377ARX
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGECNDRLAG NRAGRCGAGR LCGAASRDPA QGRARPACDR HPPVQRRGWR LDADAVRQGI
61 GELCSVRDDW LPVLCPGSRD LWEEERSGPR FTDAAVRVIV GYLCRPARLS RGLTIPCRDD
121 HGCWMIQMQQ DVRQYGDMPS RVVVLHGGPG GAGEVEPLAR ELGNRGHAVL EPFQTCQTVG
181 GQVDELSSHI ERFCAPPVTV IGWSWGAWLG CLLAAQRGML VRRLILVGSG PFEESYASAI
241 RTTKNSRLTK DQRKEISQLR PTEGDPAEVA RFIALSDIAD TYARDTSQQP FVAFDGAIHA
301 AVWAEAVDMR RNGALLEAVC AIRCPVVAIH GDYDPRPSEG VQIPLRAALP SADFVQLERC
361 GHKPWQETFA KADFYRALEA AIV
SEQDB ID: 3101377ARY
Reference:
3101377
Name: Gly cleavage system, Subunit: H protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gcvH-1
Sequence:
1 MKYTEEHEWL LAEDDLIVVG ITAHAAEQLG DVVFVELPEP GTEVSKDDEI VVIESVKAAS
61 DILAPLDGEI VEVNEALIDN PGMVNEDPMG EAWFFKMRPS DLSPMDDYMD EAAYTDFIS
SEQDB ID: 3101377AT
Reference:
3101377
Name: 3'(2'),5'-bisphosphate nucleotidase, Class: EC3.1.3.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cysQ
Sequence:
1 MTYEELIPVI RRLALEAGDV IMSIYNADDF GVKVKSDSSP VTEADEAADA LISAGLRAAF
61 PDILLVTEEQ AASHSQTGDT FLIVDPLDGT KEFINRRGDF TVNIALVENG TPTRGVVYAP
121 AKGRMFYTLA DGSSVEETGG LDKETPGDLS PIRVAEADNA ALLVVASKSH RDQATEDYIG
181 KYAVKDSKSA GSSLKFCLVA TGEADLYPRV GRTMEWDTAA GHAVLAGAGG KVVRFDNHQP
241 LTYGKDGYAN PFFIAYAPSV TLKEA
SEQDB ID: 3101377ATA
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMTFAMRDE NRKLLDRVAA MIRDEIMPLE EEYHAEIAKG DRWQYTARQT EILEWLKAKA
61 KAAGLWNFWL TDSDRGFGLT TVEYAYFAEE MGKTPLAAEV FNCSAPDTGN MEVFERYGSE
121 RMKRDWLAPL LDGQIRSAYL MTEPDVASSD ATNISMSCVR DGDDYVLNGE KYWASGAGDP
181 RCKVYIVMVK TGGEDAPKHQ RHSMIVVPAG AEGIEILRPM LVFGHDDAPH GHMHIRFTNV
241 RVPAENILVG EGRGFEIAQG RLGPGRIHHC MRSIGQAEIA LERMCKRALD KEAFGKKLAH
301 LGANYDIIAE CRMEIEMARL LCLKAAWMMD QGDARAAAPW ISQIKVVAPR VSLKVIDEAM
361 QMHGGQGISQ DTPLAAAWTG QRTLRFADGP DAVHRRQIAR TELKKYTQEK V
SEQDB ID: 3101377ATB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPVYFTET EPGLFVGNDP ARGPWSPDHC HAGPVTGLVA RAAEAVAGPE KMLTRLTLDV
61 LKPVPLAGIR ITTEIARNSR TLTTTRLALH DTTGTLCLTG TSMHLVRKEL GEVPTATVPA
121 PDFARARPGP ALLVGKLHDQ PAFGQYIEMA YPEGEDLGPG PKTVWMKAPH LLAGEVPSPI
181 QAICPLADCG NGISWNEPPV RFGFMNTDLT LQIHREPQGD WFAASAVSHW QPNGIGMSQA
241 ILYDTLGPVG MALQTLVLHP MAK
SEQDB ID: 3101377ATC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEEKSSGRV TVRLSGKLGE MISEIQNETP AETPTDVVRR ALIVYHSLAM AKLNGADLLI
61 VEPGPDGEEK RSRRIFL
SEQDB ID: 3101377ATD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGRQKGKET VPRKPDPLFD QLGPDVKSSL ERNTFAGSFS PELKRAIRRF VFEVAIILVA
61 TLIIFAATKA YAHYISDDFG GSKFPANIEQ MDKHAPPTSC RKPQYWRWNS ESFKI
SEQDB ID: 3101377ATE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRIALALSL LFPAPLTAHP HVFIDTGFEL IFAPDGALTQ VRVTWAYDDF YSLVILEELG
61 MDPDGDGSLT PEEQAQLAGF DAQWIDGYNG DLDLRLGDQP LALSGPLEPT ATTEAGRIVS
121 THLRAVTGGG VGAGAPLSLR PYDESYYTAY EVARPVTMSG RDDCLLERFE PDIDGQLAEM
181 QQMLLRIDAD ADLEEMDIPL IGAEFATEIR VTCPGS
SEQDB ID: 3101377ATF
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRLVIVPVA LVLALLGWFW LSGGFDQLTL WAAGEQRDFQ NRIAQALRGL RSGQGEALML
61 LLSVCFAYGF FHAVGPGHGK VLIGGYGLGR RVPVLRLAAI GLAASLGQAV TAIALVYTGV
121 MVLDLGRQHL VGVTERIMAP ASYAAIGLIG CWLVWRGARR LLATQKPTHH HHHHDGETCS
181 HCGHKHGPSL SEVEQIGTLR EALALIASIA IRPCTGALFV LILTWQMGIA LAGIAGTLAM
241 ALGTASVTVG VGLASAGLRG GVLGAASAWR FAGVALPMVE LAAGLLVATL AGGLFLSAI
SEQDB ID: 3101377ATG
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRFARSTSG AGSMRVEANG IYLEVEQSGP ADGVPLILIR GQGSQLVHWP KELGAGFAAA
61 GFRTIAFDNR DVGLSRRCPA PGVPDSADDI LAALAAGADL PKPYGIEDMV DDITGLMDAL
121 GIERAHFFGI SMGGAVLQQL CIDHPGRVLS ATIVMTACRP FTERAGEGRE ALLALAANLL
181 VRDTSQPEYL EAQIAEHGLW GSPGYPMPEA DIRAMAERAW ARGVDAAGKN RQVLAILHAP
241 DRRPGLRQLD LPCLVIHGRQ DTLVPLEMGE EIAAHIPASE FHAIEGMGHI ITPKLAPVMV
301 DLVRNFITRR A
SEQDB ID: 3101377ATH
Reference:
3101377
Name: chaperonin, Isotype: 10kD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: groES
Sequence:
1 MALKPLHDRV LVRRTESEEK TAGGLIIPDS AKEKPSEGVV VACGEGARKD SGELIAMAVK
61 SGDRVLFGKW SGTEVTVDGE ELLMMKESDI MGIIE
SEQDB ID: 3101377ATJ
Reference:
3101377
Name: chaperonin, Isotype: 60kD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: groEL
Sequence:
1 MAAKDVKFNT EARNKMLKGV NILADAVKVT LGPKGRNVVL DKSFGAPRIT KDGVSVAKEI
61 ELEDKFENMG AQMVKEVASR TNDEAGDGTT TATVLAQAIV REGMKSVAAG MNPMDLKRGI
121 DLATAKVVEA IKAASRPVND SAEVAQVGTI SANGESEIGR QIAEAMQKVG NEGVITVEEN
181 KGLETETDVV EGMQFDRGYL SPYFVTNADK MIAELEDCMI LLHEKKLSSL QPMVPLLEQV
241 IQSQKPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLQ DIAILTGGQV
301 ISEDLGMKLE SVTMDMLGTA KKISITKDET TIVDGAGEKA EIEARVAQIR TQIEETTSDY
361 DREKLQERVA KLAGGVAVIR VGGMTEVEVK ERKDRVDDAL NATRAAVQEG VVVGGGVALV
421 QAGKVLADLE GANADQTAGI NIVRKAIEAP LRQIAENAGV DGAVVAGKVR ESGDASFGFN
481 AQTEEYGDMF KFGVIDPAKV VRTALEDASS VAGLLITTEA MVADKPQKDA PAGGGMPDMG
541 GMGGMM
SEQDB ID: 3101377ATK
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPFPPAVFP DLVDALLRAA FDTGAEADLV RELRADRDIA TEVTFQEHGE LLGYAALSWM
61 RSPDGWLCLA PLAVAPGAQG RGIGSKVLQL TLKWAAERDL MIVVLGDPAY YEPRGFSQAR
121 AAELRAPYPN EHLMLAGRGS EAPKARLVYP LALEPR
SEQDB ID: 3101377ATL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLFLLTALT MTAFAANSVL NRLAVAQGWA DPGGFAILRV LAGAAMLTVL VLAQGQRLPL
61 WRRRRLLGAG SLTLYMVGFS LAYLTLDAGL GALILFGVVQ IAMFGWSAAT GAPPTMRQMA
121 GAAIAFGGLV WVLWPAGAFR VDAGGAGLMA LAGIGWAAYT LAGRREADAL AATGANFALA
181 LPLTAAAILP VTGVPAMSGA GLLLATVSGA VTSGLGYALW YRLVPALGPV RAATVQLSAP
241 VIAVLGGVLL LGETAPLRLL LGGAVLLGGI ALSIRRAPDA
SEQDB ID: 3101377ATM
Reference:
3101377
Name: lipase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRCLPILLLC LLPGTLWADC VVLLHGLART EASLSVMDQV FEARGLRVVR PGYPSTDMSI
61 PDLARETLPP AVAACGDETV HLVAHSMGGI LIRYWLLSNR PAKLGRVVLL GPPNQGSELV
121 DELGAWEVFG RLNGPAGLAL GTGPDSVPRG LPPVDYPVGV IAGDQSLNPI FSSIIPGPDD
181 GKVSVASTRV AGMADHMVLP VTHTFMMNNP RVIAQTLHFI ETGHFDADLS WLDAVFETID
241 RVCLRSECWE GPGGRER
SEQDB ID: 3101377ATN
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGVELTLTG AEVLLPGGPA RRDLCLSGGQ VVDAPAGRQV DLSGYLVLPG IVDLHGDGFE
61 RHMAPRRGAM KEMGEGVVAA EAELAANGIT TAVLAQFWSW EGGLRGPDFA AGVFQAIRQV
121 QGSLVTDLIP QLRFETHLLE DYAALPDRLA EWQVPYVVFN DHLPHDRLAE GRKPPRLAGQ
181 ALKAGRSPEA HLALLQALHA NGPQVPAALD KLCAELHRRG VRMGSHDDHS AEDCATGQGR
241 GLTISEFPET LEAAEATRAS GGHVILGSPN VVRGGSHKGN VSALDLITMG LCDALASDYH
301 YPSPRRAALM LVRTGLLDLA AAWALVSSGP ARVLGLDDRG ELAPGKRADL VILDAQSHRV
361 AATFAAGRVS YMSGDVATRF LA
SEQDB ID: 3101377ATP
Reference:
3101377
Name: phosphoribosylaminoimidazole carboxylase, Subunit: ATPase, Class: EC4.1.1.21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purK
Sequence:
1 MSEALKPGAR IGILGGGQLG RMLSVAAARL GFVTHIYEPG ANPPAGQVAD RVTTAGYDDA
61 EALAQFAASV DVITYEFENI PTEALDILEA HRPIRPEREA LRVSQDRLTE KSFLRDLGLM
121 TAPFADVTDL ESLEAAIAEI GTPAILKTRR FGYDGKGQAR LKAPGDAAAA LADMAGAPAI
181 LEGFVQFSHE VSVIAARGLD GQVACFDPGE NVHRDGILHT TTVPARLSAA QRTDAVLLAA
241 RILNALDYVG VMGVELFVTP AGLIVNEIAP RVHNSGHWTQ NGCAVDQFEQ HIRAVAGWPL
301 GDGQRHTDVV MENLIGADMD RIPELARERD LALHLYGKAE AKPGRKMGHV NRMKRNG
SEQDB ID: 3101377ATQ
Reference:
3101377
Name: phosphoribosylaminoimidazole carboxylase, Subunit: catalytic, Class: EC4.1.1.21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purE
Sequence:
1 MAGVKVGIIM GSQSDWPTMK GAAEILDELG VAYEARIVSA HRTPDRLWDY GRAAVGRGLQ
61 VIIAGAGGAA HLPGMMASKT RVPVIGVPVQ TRALSGVDSL YSIVQMPKGY PVATMAIGAA
121 GAANAGLMAA GILALQDAGL AERLDAWRAA LSASIPEEPV DE
SEQDB ID: 3101377ATR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 METDLRVARM NAPSDMSMKT DEVLRVELEV FRRQHRDLDE AIAALEEKGT ADQLTVKRLK
61 KQKLRLKDII AMLEDRLTPD IIA
SEQDB ID: 3101377ATT
Reference:
3101377
Name: heat shock protein, Isotype: Hsp20 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKLTLGSYP HMLGFEQLER LLERSAKSGN EGYPPYNIEQ TSETSYRITL AVAGFAEADL
61 SITVEDRQLV IRGRQSDDSE GRVFLHRGIA ARQFQRMFVL AEGVEVGEAV MENGLLHVDL
121 SRAVPQSVVQ TINIRKG
SEQDB ID: 3101377ATU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHTPFDFKDD GDRIVYVKTV DVADLPDEVR QQAGGRDHLY AVHNAAGEQL ALVADRRMAF
61 VLARQNDLSP VAVH
SEQDB ID: 3101377ATV
Reference:
3101377
Name: phenazine biosynthesis protein, Isotype: PhzF-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNWYDFDWVD AFTDRPFGGN GCAVVHGGAG LPAETCMAYV RETSLVECTF TGPSDVADLK
61 VRYFLASREI PFAGHPTIAT VAALSARGFI DKTDLVLETG AGLVPIRIFG DEIEMTQVAP
121 QFGALVPAEQ VARVIGLPTE AIVSPPQMVS TGLPFCITVL RDRAALQAAR LDVAALTAMA
181 AGLGYDGSDM LEPFLVTLEG ATEAGDTFAR LLLAPPSPPE DPFTGSATGA MAAYLWHHGL
241 MAKDTFIAEQ GHGMGRPGQA RVTRLGPPDA MTGIKVAGQG TIVMRGQVRL PG
SEQDB ID: 3101377ATW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPAIAVLP YGMKLGPALS GLPLDQVNWP LGCPERLVGK TLGDLGAGDH LLVYPRTGTH
61 FQLSRGTRAR ISLIMAEPAV IHAKHYALLR VTWRRFHRVL TFNQAAVDRL PNARLLLFGS
121 TWVPEWQSLT PEKVAQCSLI ASAKRDSTGH KLRHAVVDWV RASDQDVAVL GRGYQPFDSK
181 ADGLAPYRYS VVIENVQERN YFSEKLLDAV FCETVPIYWG CPNIADFVDT TAMILCTREE
241 DIRRAVAEMS AEDYAARLPA LRALKQQLAP YAAHEARAAR MILDEL
SEQDB ID: 3101377ATX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVESNLLQGG LMHKGMRILA VLAVSLLPGF PQAAEQWEKD QIACVQNQLA TLGISGVSPT
61 GKINGATKAG TEAIRGQYPS AAGLALLPKL SGVSAVGWCR EIAALQPALR RFMPSAQPPL
121 VTGEGGQGSM QTRLLATAFR DVEQFFQSQY GIRPASRVDV AGAASGEVLT QLAVNLQRQR
181 GRSIARMKDH VTDNCDSPSL RYGGQAYRNQ LLLCWPVAKQ YDKGWYSKVY PVVSSIMAHE
241 YMHHVQRELA NDKVSTGANR SQAKRGPAWM TEGTAELVEA RWRRAKLGKG KSFAELQKAA
301 HDHPKTLGGM HGWGSVKDAH QYRVAHFAAH LLAERYGDQA IMNYWRYIGQ GQSWDGAFRA
361 AFGESLSAFS SRFETLRHNT AQAKAYAAGQ
SEQDB ID: 3101377ATY
Reference:
3101377
Name: sulfate adenylyltransferase, Class: EC2.7.7.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sat
Sequence:
1 MTMLSNLAPI PELYVSYDSA QKLKMEAAEL KSHDLSPRQI CDLELLMNGG FSPLKGFLSE
61 ADYNNVVDNM RLADGTLWPM PITLDVKEGF ADTIELGQDI ALRDQEGVIL ATMTVTDKWV
121 PNKAHEAEKV FGADDQAHPA VNYLHNVAGK VYLGGPVTGI QQPVHYDFRA RRDTPNELRA
181 YFRKVGWRRI VAFQTRNPLH RAHQELTFRA AREAQANLLI HPVVGMTKPG DVDHFTRVRC
241 YEAVLDKYPA ATTSMSLLNL AMRMAGPREA VWHGLIRKNH GCTHFIVGRD HAGPGKNSQG
301 QDFYGPYDAQ ELFKKHQDEI GLEMVDFKHM VYVQEKAQYY PVSEVPEGDT VLDISGTELR
361 RRLREGLEIP EWFSFPEVVK ELRRTSPPRS KQGFTVFFTG FSGSGKSTIA NALMVKLMEM
421 GGRPVTLLDG DIVRKNLSSE LGFSKEHRDL NIRRIGYVAS EITKNGGIAI CAPIAPYATT
481 RRAVREEIEQ FGAFVEVHVA TTIEECERRD RKGLYKLARE GKIKEFTGIS DPYDVPEAPE
541 LRVETENVEV DNCAHQVLLK LENMGLIAG
SEQDB ID: 3101377AU
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRYRQHKSL LSGAITMAEL IFHNVVRGVR QGHSNAYAAL GKNMMQILVF VLVFYMMFSM
61 LGLRGSAIRG DFLLYIMSGI FLFMVHIKTV GAVAGAEGPN SAMMKHAPMN TIIAILSAAL
121 GSLYTQLLTL FLILFGYHVA FKPVEIADPA GAFGMLMLAW FTGCAVGLVF LSIKPWAPML
181 VGVMTTLYQR ANMIASGKMF VANTLPGYML AMFDWNPLFH AIDQCRGFVF RNYFPHNSNW
241 HYSLWLGIIL IMIGLMGEFY TRRHVSASWY ARR
SEQDB ID: 3101377AUA
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTSALWRGS LATRLRIASG LILFAYAFFH FVNIGLGLIS PAWMEAFQDA RQVITRSLVG
61 SILLYGALLI HAGLALSGLA RRRRLRMRAS EAVQVVLGLL IPLQLIAHLT HTRYAHEVYG
121 VNDEMSYLII LMWPNISIWQ QSGLLLVVWI HGCIGLHFWL RLTSWWRAWV PWMIGLAVLV
181 PAFALAGLLT EGRRMFAIFT NDAQRPGYME AFNWPDAATF GALFQVKDLG LAVFWGLLAL
241 TAAIHLGRRL LRRRNAVRIR YVDGPEIVSE RGLTLLQMSR SHGVPHTALC GGKGRCTTCR
301 VVIEAGADLL HPPSEVELRS LRAVGAPPNT RLACQIRPTD PATVFRVFRP EGGRSRAHAS
361 QGQERQLAVL FLDMRGFTAR TTGQLPYDVV FLLNRFFDAI VPSVIGAGGT VDKYLGDGFL
421 ALFEARDAQT SARAGIEAAR SIGAALEVFN RTLAAEGTPP VRIGMGLHLG TLVLGEIGAA
481 GHAPRTIIGD TVNAASRLEA ETKALGVELL ISEAVLHAAG ADLSALELGS FALRGVPQPV
541 AALPVATAAK LSLDQTRGEP SSSQP
SEQDB ID: 3101377AUB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDFSGTVWR ILFADLAGAP TAPARAPEGR FHHSGQWALY ASLTPEGAGV AIRRYVGPQD
61 PPRVIVPLEV TRAWLADLRG RPEVSQIWQD IRATGAAAPS WPYSDTARAE GAQGLLYSSR
121 SRPELSHIVL FDPGPVRAGG TAPLPWPGTD ITTT
SEQDB ID: 3101377AUC
Reference:
3101377
Name: thioredoxin-disulfide reductase, Class: EC1.8.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trxB
Sequence:
1 MAETRHTKVL IIGSGPAGYT AGVYASRAML EPILVQGIEP GGQLTTTTEV ENWPGDTEVQ
61 GPDLMVRMEA HAKAMGCEII GDIITSLDTS ARPFVAKGDS GTTYTADAVI LATGARAKWL
121 GMESEEKFKG FGVSACATCD GFFYRGQEIV VIGGGNTAVE EALFLTNFAS KVTLIHRRDE
181 LRAEKILQDR LFKNEKIVPL WFNQLEEVYG TDAPLGVEGV KVRNVKTGEI TDIPCKGVFV
241 AIGHAPANEL VKDVLELHNG GYVSVKPGTT ETSIPGIFAA GDLTDHKYRQ AVTSAGMGCM
301 AALDAERFLA EQE
SEQDB ID: 3101377AUD
Reference:
3101377
Name: Leu-responsive regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVAHRLDEID RKILAELQAD GRMTNVELAK RVGISAPPCL RRVRALEDAG LIRGYHAEVN
61 ARQLGFEVQV FAMVGLESQA EVELSAFEAR CREWPLVREC HMLNGEVDFM LKCVAPDLSS
121 FQSFLTGQLL TTPNVASVKT SLVIRGAKDE PGVPFDVLEE RLSRSA
SEQDB ID: 3101377AUE
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIPHSLARA ARNAVHTSPL LQDPAALRGP QPRPQMRRYE VSTLLENGNV VQTRHIAPAL
61 PLFEDAFCAF SRGSLIDTDC GPMAIEDLLP GDRVITQDGS AQEVVWKGST VIVPGRVSAT
121 GRDYRLTRIM ADAFGMQRPM SGVIAGPSAR LLATPGHLRA LAGDQPMLTP VQHFVDGMGI
181 IETAPPTPIE VFHICLRRHA VINVDGLQFE TYHPGVQAVR VLSQAIRSLY LNLFHHIDQL
241 TDFGPQAFAR AGEGEIDAIP A
SEQDB ID: 3101377AUF
Reference:
3101377
Name: ORF TIGR00726
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLEILTADS LSFVRHGFFT RRGGASSGVF AGLNCGSGSS DQTDVVILNR ARVAQAMEVE
61 REALVGVHQV HSPDVVTVTG PLNDKPRADA LVTATPGLAL SVLTADCQPV LFADPEAGVI
121 GAAHAGWRGA RDGVLEATLD AMEALGASRA DITAVIGPTI SQRAYEVGPE FLDDFLAEDM
181 DNSRFFANGT GDRMLFDLPA YGLHRLRAAG CGQAEWTRHC TYSDADRFYS YRRATHAREA
241 DYGRLISAIR L
SEQDB ID: 3101377AUG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLTGLLLER IAQQGPLSLA DYMAECLLHP EYGYYTTRDP LGVAGDFTTA PEISQMFGEL
61 IGLALAQAWM DQGRPAPFTL VELGPGRGTL MADALRATRA VPGFHEAARL WLVEASPVLR
121 ATQAQALAGH DPQWCDTVSD LPAGPLFGVA NEFFDALPVR QFQRAGAVWR ERLVGARDGA
181 LCWGLGAEAL QPALAHRLED TREGDLVELC PAAGLILSEL ASRIAADGGA ALIVDYGDWR
241 SLGDTVQALR NHAPADPLAD PGQADLTAHV DFEVLAMTAR AAGCAHSRLS TQGVFLERLG
301 IAQRAQALAR HADEAALDRL ITAHRRLTHP EEMGNLFKVL GLYPSDATPP PGLEP
SEQDB ID: 3101377AUH
Reference:
3101377
Name: pro-lipoprotein diacylglyceryltransferase, Class: EC2.4.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lgt
Sequence:
1 MQAVLNFPDL SPELFSISLF GMEFALRWYA LAYIAGIVIA WRLAVLATRR AALWPANTPP
61 MAPARIEDLL TWIILGVILG GRLGFVLFYQ PAYYLANPTE ILMVWQGGMA FHGGLLGVVI
121 AAWLYSLRHN IPKLSLADLI THTVAPGLLL GRLANFINAE LWGRPSDLPW AVIFPGPAAQ
181 ACPGVVGLCA RHPSQLYEAA LEGLLLGTLL LWLVWRRGAL KRPGLITGVF LAGYGLSRFV
241 VEFFRQPDAQ FVTPGNPLGL AWQVGEYGLT MGQLLSLPMI ALGLWFVLRA RAVPA
SEQDB ID: 3101377AUJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTRNKILDD ISQLMTNAMG VAQGARDEAE TAMKSLIDRW LADRDFVTRE EFDAVRAMAQ
61 KAREENEALA ARIAALEARL KD
SEQDB ID: 3101377AUK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALSEQFLEE DIHPIDIVEH LAEHHDWDFD RIGDDQIAMA VEGQWRTYSL TLAWSGYDET
61 LRLICTFEME PPAEKLPLLY ELINAMNDQC WAGTFTYWAA QNLMVYRYGL VLAGGQVASA
121 EQIDTMIGAA VLSAERYYPA IQLMVWGNRS PADAMQVAIA EAYGRA
SEQDB ID: 3101377AUL
Reference:
3101377
Name: pyrroline 5-carboxylate reductase, Class: EC1.5.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: proC
Sequence:
1 MTGEGHIVDM SDIARRGLVL LGCGKMGSAM LAGWLDGGLP AGSVWVIDPY PSDWVKAQGV
61 HVNAELPGDP AIALIAVKPQ MMGDALPQMQ ALGNGTTLFV SVAAGTSIAT YEQILGADTP
121 IVRAMPNTPA AIGRGITALI GNARASAADL DLAEALLKAV GQTVRLEREE QMDAVTGVSG
181 SGPAYVFHLI ETLAAAGTAQ GLPADLAMQL AKATVAGAGA LAEAAEEDPA QLRVNVTSPN
241 GTTQAALEVL MEPETGFPGL LNRAVAAATN RSRELSRG
SEQDB ID: 3101377AUM
Reference:
3101377
Name: chaperonin, Isotype: csaA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: csaA
Sequence:
1 MAEISFDDFL KVDIRVGEVI RAEAFPEARK PAIKMWIDFG PEIGERKTSA QITAHYDPAT
61 LVGKQVMAVV NFPPRQIGKF MSEVLVLGLP DDNGEIVLIG PDGKVPLGGR MH
SEQDB ID: 3101377AUN
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLLIARPMT AAVEARARAE FETEIRTSTT PLSEAEMLRA LREFDIVMPT LGDMFSADVF
61 AQVPEPRCRL LANFGVGYNH IAVAAARAAG VAVTNTPGAV TDATADIAMT LLLMTARRAG
121 EGERLVRSGA WEGWHPTQML GHHVTGKHVG IVGLGRIGQA IARRCHFGFG MQVSYVARSD
181 KDVDFPVSRM ESLAALAGAV DFLVIAVPGG GETRHLIDAQ ILAAMKPSGI LVNIARGEVV
241 DEAALIAALS ERQIAGAGLD VYEFEPKVPE ALRAMEQVTL LPHLGTATEE VRSSMGHMAL
301 DNVAAFAAGR DLPNPVS
SEQDB ID: 3101377AUP
Reference:
3101377
Name: thymidine kinase, Class: EC2.7.1.21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tdk
Sequence:
1 MAKLYFNYST MNAGKSTVLL QASHNYRERG MQTYLMTAAI DGRAGTGRIA SRIGIGAEAD
61 IFTPRDDVFA MIRDRLGAGP VACVFVDEAQ FLSPEQVWQL ARVVDDLDVP VLAYGLRVDF
121 QGKLFPGSAT LLALADEMRE VRTICKCGRK ATMVIRQDAS GRAITEGAQV QIGGNETYVS
181 LCRKHWREAT GDPGAKGH
SEQDB ID: 3101377AUQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFDLERIHG KNSIRFPDKN NGAENAVQER VNMADIGAYL KKHTEALVKD VGIEAACALT
61 GKSKATLGRY YSDNAEHADR FIPVDAVARL EGASSYPHVT SALAELKNIT LSYDGRNSDT
121 ETRTGGVNAD VIALSQRFAM LMTEYQTAIE DGIITVNEAK RLLKETVQLQ QVLIDMKLHL
181 EEESTS
SEQDB ID: 3101377AUR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGSLRALAF LQTLPPDRRQ PNLFFAALRL VGGLPEAGVA FDDVLTREGD AIAAVMRARR
61 TQTNEPGRCA CLLPLLAQLD GPLALIEVGA SAGLCLLPDL YGYDWGRARL DPPGGTGAPM
121 FPCRVNVRAP LPEHHPEIVW RAGLDLSPPD LGDAADVAWL EALVWPEQTD RLAGLRQATS
181 IARQAPPPVM AGDLTRDLEA LIAQAPADAR LVVMHSAVLT YVSDPGARAD FARLMRSRDL
241 HWISNEAPGV FPDHAEGLTP REDMFLMALD GRPVAWTGPH GQSLDWL
SEQDB ID: 3101377AUT
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNYTMAGMIL FTHNYQDCVD FYGSTLELEV LHRIDRPGET LTTFLLGDAY LMVESGGVAS
61 DKPKTLEQSP VKLRFNVRDV RAAADQLLEK GVPVKVTEHI WGTTAEFVDP DGNRCALRSD
121 KGFGE
SEQDB ID: 3101377AUU
Reference:
3101377
Name: 3-oxoacyl-acyl carrier protein synthase, Isotype: III, Class: EC2.3.1.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabH-1
Sequence:
1 MFRPAITGTG VFTPPNVITN AELVTAFNAY ADRMNAENAE AIAAGEMEPM QHSSEEFIVK
61 ASGIENRYVM DKTGVLDPAV MHPLLRQRGD DEPGIMTEMA VYAAKKALEQ AGKTAADVDA
121 VICAASNLER AYPAVAIEIQ QALGIEGFAF DMNVACSSAT FGIQAAADMI RSGSIRSALV
181 VNPEICSAHL EWRDRDCHFI FGDVATATLI ERIEDAKGPH FEILSTRCAT QFSNNIRNNN
241 GFLRRSRPDG MADRRDMQFM QNGRKVFKEV LPMVSQHIAD HMAAEGVANT HLKRLWLHQA
301 NKTMNDFIGK KVLGREPEPG EQPNILQDYA NTSSAGSIIA FSQNSADLVE GDLGLICSFG
361 AGYSVGSVIL RRHTS
SEQDB ID: 3101377AUV
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDHDSSPPK SYPPEIEAMM GVYALYWKLE EVIASEVAET CLSRPEVHML IKLDAPMRMG
61 VLARDMLALP STITATADSL ERAGYLTRSR DPDDRRAWLL ELTPEGRALR AEFVADAGAL
121 FHEVSGLDAA QTEEFARLAR KIRLTILETG LSEGFKT
SEQDB ID: 3101377AUW
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRPPLAADT LAKPVKLMVV SETAPGFSRQ FFGQVAARRT VDLAFQVAGQ IVQFPVNEGV
61 LLPKGSLIAQ LDLEPFELQL DRARLQKEQA DRTVARLSRL KGTTVSQVSL DDAETSAQLA
121 AIALRDAEYA LEHATLTAPF DALISRRNVA AFTTVAAGTP VARIHDMSEL RIEVDVPEIL
181 FQRAGEPEDV TITATFPASD RVFPLQIREF DAETSSVGQT FRINFGFTPP PDLNVFPGSS
241 VTVNVRVRDG EPGIAVPPSA IIPDAGGGPG VMIFEPTGAD TGTVRRQAVE IAPLPNGSVR
301 VLSGLGEGNE IVSVGGASLK DGQAVRRFTG FGN
SEQDB ID: 3101377AUX
Reference:
3101377
Name: AcrB/AcrD/AcrF family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNIARLSIEK PLYTWLIILI SLVGGIWGFA TLGRLEDPAF TIKQAVIATQ YPGATAEQVA
61 LEVSEPLESA IQKMDEVDII TSVNQPGQSL IEVEIKSTYD GGELPAIWTK LRARVGDAAR
121 TLPDGVSAPF VNDSFGDVYG LFYAVTAPGY SDAEQHELAT WLRRELLAVP GVAGVEVAGL
181 PDEAIFVEPD LALSVNQNVP VQAIANAIAT ADSVRDAGTL RNGDGKTAIL RPEGSDSVDA
241 IAGLSVGTQG KVINLFDMAQ VHRGRQADPD LIIRHNGGEA FSLGIAGLAT ENIVEVGQRV
301 DAHLAELDGD IPAGVTLEPI YQQHVVVEEA SNAFLVNLAM SVAIVVAVLA LFMGWRAAVV
361 VGATLLLTVV GTLLFMALFS IEMERISLGA LIIAMGMLVD NAIVVAEGMQ IAMLRGKPSR
421 AAADEAAGKT QIPLLGATVI GIMAFAGIGL SPDATGEFLF SLFAVIGISL LLSWVLALTV
481 TPLLGHYFFK QGHADAADAY GGPLFRAYAA TLRAALRLRW LVVVGLVAVT AACFAGFGLM
541 KQQFFPNSNT PLFFVHYKLP QGTPIETTAG DLARVEAWLN KRSDVLAYTT FAGQGATRFM
601 LTYAAEKPNP SYGHMIVRTA SIEDIPALQA DLEAFGTATF PEGEFRTRRL VFGPGGGDPI
661 QVRFSGPDPA VLRQLADTAM GEMRAASDNI TGVRSNWYEQ ELALRPVYAT ERAQIAGVSR
721 DDIADMLRFS TDGITSGVLR ERDRLIPIIV RRPADGPYSI VDQVVYSPLS ETFVPVEQMV
781 DGFEYEAVNT LVHRRDRLLT VTVGADIPAD LTAAQVHAEV RPVIEAIDLP PGYRMEWGGE
841 FEDSAKAQES LGKQLPLSLL IMVLISILLF NAIRQPVIIW LLVPMSVNGV VIGLLGTGLP
901 FTFTALLGLL SLSGMLIKNG IVLVEEIDLV RAEGKPLRAA IVEASVSRIR PVMLAAVTTI
961 LGMAPLLWDA FFVSMAVTIM GGLAFATVLT LIAAPVFYDL FFSREARAGA
SEQDB ID: 3101377AUY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNIYTTFGTN DLTRAVRFYD AVFAVLDQPR LPDWPEGWAG WGQDYDNGTG FWVCAPFDGS
61 PASTGNGTMV GFPAKNAAQV RAFHAAGLAH GGTDAGGPGT RPYYGPDFYV AYLRDPDGNK
121 ISCFYYHYDP ATDAGA
SEQDB ID: 3101377AV
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWLVALLLV LAAPLAADPV PALFDVTGVA ADDVLNVRED PSAGSEVIGT LAPDAVGVEV
61 VDLTFGGDWG RVNVNETSGW VSMRYMQQQP ESDGVWMTPR FTCSGTEPFW SLTVEQGVGA
121 RFQIMGEAEQ ALPAGLLRPG AGLIDRFALP LGHNLAILRQ MQCHDGMSDR AYGLDVGLML
181 NGSLYAGCCT LLPN
SEQDB ID: 3101377AVA
Reference:
3101377
Name: carbamoyl phosphate synthase, Subunit: large, Class: EC6.3.5.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: carB
Sequence:
1 MPKRTDIQSI MIIGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPGL
61 ADATYIEPIT PEVVAKIIEK ERPDALLPTM GGQTGLNTSL ALEEMGVLDK FGVEMIGAKR
121 HAIEMAEDRK LFREAMDRIG LENPKATIVS APKNEKGKFD IRAGLAEAMD ALEDIGLPAI
181 IRPAFTLGGT GGGVAYNRDD YEHFCRSGLE ASPVAQILID ESLLGWKEYE MEVVRDKADN
241 AIIVCSIENV DPMGVHTGDS ITVAPALTLT DKEYQIMRNG SIAVLREIGV ETGGSNVQWA
301 VNPADGRMVV IEMNPRVSRS SALASKATGF PIAKIAAKLA VGYTLDELDN DITKVTPASF
361 EPTIDYVVTK IPKFAFEKFP GSEPYLTTAM KSVGEAMSIG RTIHESMQKA LASMESGLTG
421 FDEVTIPGLS VGLWDAVEGA DDKAHVIKAI SRQTPDRLRT IAQAMRHGLS DDEIFGVTKF
481 DPWFLARIRE IVEEERALRK TGLPTTEEGL RALKMLGFTD ARLGQLTGRD EDNVRRARHN
541 LGVTAVFKRI DTCAAEFEAQ TPYMYSTYEA PMMGEVECEA RPSDRKKVVI LGGGPNRIGQ
601 GIEFDYCCCH ACFALTDVGY ETIMINCNPE TVSTDYDTSD RLYFEPLTFE HVMEILRVEQ
661 QNGTLHGVIV QFGGQTPLKL ANALEQAGIP ILGTTPDAID LAEDRERFQD LVNRLGLKQP
721 RNGIASTDAQ ALAIAEDIGF PLVIRPSYVL GGRAMEIVRD MDQLRRYIAE AVVVSGDSPV
781 LLDSYLSGAV ELDVDALCDG EAVHVAGIMQ HIEEAGVHSG DSACSLPPYS LSAEIIEQIK
841 DQTNKLARAL NVVGLMNVQF AIKANEQGVD EIYLIEVNPR ASRTVPFVAK ATDSAIASIA
901 ARVMAGEKLS AFPMRPPYKE GEDTKIADQM TLADPNMPWF SVKEAVLPFA RFPGVDTILG
961 PEMRSTGEVM GWDRSFARAF LKAQMGAGMV LPSEGRAFIS IKDADKGAAM LEAAQVLVDQ
1021 GFTLVATRGT QSWLEGHGVP CEIVNKVYEG RPDVVDMLKD GQVHLVMNTT EGAQAVSDSK
1081 AIRSIALYDK IPYFTTAAGS NAAALAIKAQ AEGDIEVRSL QG
SEQDB ID: 3101377AVB
Reference:
3101377
Name: p-aminobenzoate synthase, Subunit: component I, Class: EC4.1.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pabB
Sequence:
1 MQLRFDHGPC GAGTGFDRPV RLIRADTAAQ VPAALADLDA ARADGAWLAG YASYELGYAL
61 EPRLAGLMPE GRRLPLLCFG VYDGPRVLPL PTPGGGIGDF APRWDGARYG AAFDQVHSAI
121 GAGEFYQANL TFPVDLRLHG AAPALYAALA ARQPVGHGVL VTQPGLPDIL CRSPELFFRT
181 DPEGRIETRP MKGTQPRSDD PVEDARRRDW LACDAKNRAE NLMIVDLLRN DISRVALPGS
241 VHVPDLFKVE TYATVHQMVS RVAARLRAGV TLSDILRALF PCGSITGAPK IRAMEMLARL
301 EPWPRDIYCG SIGWAAPDGA SEFNVAIRTL LADGARATLN VGGGVVWDST AGSEYEEALW
361 KARFARQMIP AFA
SEQDB ID: 3101377AVC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEGPLCPPDD PGFRLIETLG WHPDEGPRRA ALHLARMARS AAALGMPLDQ TEAQRLLDQI
61 TGPAPLRCRL TLGTRGALSL ETAPLAASPP HWRVAIHPER LDADDPWLRH KTTRRALYDR
121 ARAELPTGFD EWLFLNRAGE VCEGTITNIF ADLGDGLLTP PLASGLLPGI LRAELLASGQ
181 AREACLTPQD LHEAHALYCG NALRGLIPAT FAPDA
SEQDB ID: 3101377AVD
Reference:
3101377
Name: Asp-tRNA synthetase, Class: EC6.1.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aspS
Sequence:
1 MHAYRSHTCA ALTAANVGET VRLSGWVHRV RDHGGVLFID LRDHYGVTQV LCDGDSAAFA
61 ALEKVRSEWC IRIDGTVKAR DADLVNPKLP TGEIEVYVRE LEVLGRAEEL PLMVFGDQEY
121 PEETRLRYRY LDLRREAMQA NMTLRSDVVA SMRRRMWDKG FREYQTPIIT ASSPEGARDF
181 LVPSRLHPGR FYALPQAPQQ FKQLIMVSGF DKYFQIAPCF RDEDPRADRS PTDFYQLDLE
241 MSFVTQQDVF DTIAPVLAGV FEEFGGGRKV DAPQDWPQIA YADAAKWYGT DKPDLRNPIK
301 MQDCSEHFRG SGFAIFAKLL EQEGTEIRAI PAPTGGSRKF CDRMNAFAQK EGLPGMGYIF
361 WRDQGEGLEA AGPLAKNIGP ERTEAIRQQL GLGVGDAAFF LGGKPKSFEK VAGKARDVIG
421 AELGLTETDR FAFAWIVDFP IYERDEETGE IDFEHNPFSM PQGGMEALNG DPMAVRGYQY
481 DLACNGYELV SGAIRNHKPE IMLKAFELAG YGADEVKARF GALFNAFHYG APPHGGCAAG
541 IDRIVMLLAD EANIREVMMF PMNQRAEDLM MQAPSEPSSD QLMELGLRVI LQD
SEQDB ID: 3101377AVE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQSGVMLPG RIPKTSTGQP PLRPAAMRLS SLWVPVVLAP NLAATVLAVS LPSLSRQ
SEQDB ID: 3101377AVF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARSIDDAVF DPGGAVEAQL GWTLGPRYSV ASYRSAAAIL AQRAPGELAA ILRILDAFTI
61 SRTEIRSPGG NRMSATTRFA DLAAAEGFHQ EVRIEADLTV RLREGKGENA PEIDRILRAD
121 YIHNHLVDFW RGRVAFDYEW NSKDQTYDRD LYAFRSFFEA GVIDVGVIVT RALPPEFFQS
181 LGYCLDKDGN ETASTVAAKF GASTTGTHKL LSRIAAGRSG GCPVLVFGIR PGNITPD
SEQDB ID: 3101377AVG
Reference:
3101377
Name: type II DNA modification methyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQSASQDLS DFLGDDRFAT VMADPPWRFT NRTGKVAPEH KRLARYPTMT LEDICALPVA
61 DYLQDRAHCY LWVPNALLPE GLQVLSAWGF EYKSNIVWHK VRKDGGSDGR GVGFYFRNVT
121 ELLLFGTKGK NARTLAPGRR QVNMMQTRKR EHSRKPDEQY ELIESCSWGP YLEMFGRGVR
181 DGWTVWGNQA DADYKPSWKT YSYNSGVAAE
SEQDB ID: 3101377AVH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGMLPIAIV TAGVLIYALR WHQTPVPRRR QVGPR
SEQDB ID: 3101377AVJ
Reference:
3101377
Name: response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDDSDPFAAP HRLPTVTRPL LGLTILVVED SRFACEAMRL LCLRSGARIR RADCLKSARR
61 HLQIYRPSVI VVDMGLPDGS GADLIEELAH TAPRVGVILG TSGDDCAEER ALEAGADGFL
121 AKPVTSLATF QAEILSRLPA DRQPTGPRIL HDEHIRPDPI AYHDDMAHVA DVLSEKTDPQ
181 TLDYVAQFLL GVARSAEDHV LASAAQALAR TRASGAPVTS DTARIAGLVQ ERLNHRKAI
SEQDB ID: 3101377AVK
Reference:
3101377
Name: methylmalonyl-CoA epimerase, Class: EC5.1.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIMIGRLNHV AIAVPDLEAA SAQYRSALGA KVGAPQDEPD HGVTVVFIEL PNTKIELLYP
61 LGENSPIQGF LDKNPSGGIH HVCYEVEDII AARDHLKSTG ARVLGTGEPK IGAHGKPVLF
121 LHPKDFNGCL VELEQV
SEQDB ID: 3101377AVL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSITSALVLF SVIWFMTFLI VLPIRVRTQG DLGDIVPGTH ASAPEHHHLK AKAWITTGVS
61 VVLWAIIGGI ILSGWISVDD IDLLNLRPPQ E
SEQDB ID: 3101377AVM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIIINAFLAA LGQIGDPRFR KVLGLGVGLT LALLVAVYAL FLWLIQTLVG PEVTLPVLGE
61 VTWVGGLLSV SSLIFMLVLS VFLMVPVASA ITSMFLDEVA QAVEDRHYPH LPAVAKVPFG
121 EALKDTVNFL GVLIAANLAA FVLYAMFAPF ALFIFWGLNG FLLGREYFTL AAMRRVGRAE
181 ARRLRSKHLM TIWAAGALMA IPLSVPLVNL LIPILGAATF THIFHAVNGI R
SEQDB ID: 3101377AVN
Reference:
3101377
Name: nitroreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPRNDAALE FLQTRRSRPA KTLSAPAPSR EELLPILTAA ARSPDHGKLE PWRFVVLEQG
61 AMARLADLAE ARGRALGKPD EDIAKGRAQF DQGILAVAVI EVQKDSPKIP AIEQTYSAGA
121 VCLAMLNAAL AAGWGANWLS GWPSHDRIFC AEGLGLESHE RIAGLIHIAT ETSAPPDRPR
181 PDLEAITTWV TA
SEQDB ID: 3101377AVP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTPHAFLMA AFLALSACAT SAPQPVAQYP GSLPPPKAQR DSDARASATA YYLGPRGEEW
61 Y
SEQDB ID: 3101377AVQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKPKVKSLP DLSHLARPGQ EIALRVTPKA ARDSVTLAGE GLRITVTAPP EDGKANEAVR
61 KLLARAMGVA PSRLTLRRGQ TARDKTFVYL GG
SEQDB ID: 3101377AVR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVGRHRHCGL MFTIEHEFDS TVITLVDEGE APLQEDVVIN SFAECVTVEQ FDPRTETMQK
61 ITLSPEQLRD LAAALDLPEG VYQLREVPG
SEQDB ID: 3101377AVT
Reference:
3101377
Name: peptidase, Isotype: M48 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRFLTLTVA LGFLSACEVS DPGPVAPLPK VPDSPPMSAS AAQSAFASVS ARVRPVAVRE
61 CQQRTQGANC DFKIQIDPDP KAPVNAYQTV GKNGQPLIIF TRSMIATARN ADELAFVMGH
121 EAAHHIRGHL ARQNASAIAG AVILGGLVGL AGGGASTIDA ATQIGASVGA RTYSKEYELE
181 ADELGTVITH KAGYNPLVGA HFFSRIPDPG DRFLGSHPPN AARIQTVQRT AGSLGLTQ
SEQDB ID: 3101377AVU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGLTRLGVV LTDRGSKYAV SGAPARSREE VDTVLAALKS DRAYAKATHN TWAALLPSGA
61 LKADDGESGA AMVILRMMER AELADHVIVV TRWYGGKKLG GDRFRRVGDA TRAYLDHLGL
121 CA
SEQDB ID: 3101377AVV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADRDTLRKH ADLFDRMATT LGHDLEESAL KGQVRIDEIS DAVLACTGCS NPAHCSDWLA
61 TRDTALQAPQ YCRNRALLER LHP
SEQDB ID: 3101377AVW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQIPLGDIE RHFWLTRSVA RTIGVSFTEA LAEKRLTEEG YAELITRCRA AGCTERCQLW
61 LACQQGRAEA APEFCTNAEA LDRLR
SEQDB ID: 3101377AVX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDSPEIVQK APFAVEVTEG KSYFWCACGK SQKQPFCDGS HKGTAFAPVK YTAEADKKVF
61 FCGCKHSGKQ PLCDGSHSKL
SEQDB ID: 3101377AVY
Reference:
3101377
Name: RNA modification enzyme, Isotype: MiaB-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAMSTNPPN LRPDLAPAAR LGTAATRPGQ PTIGMVSLGC PKALVDSERI LTRLRAEGYG
61 ISPDYAGADA VIVNTCGFLD SAKAESLDAI GEALKENGKV IVTGCLGAEP DYIREHHPRI
121 LAVTGPHQYE QVLDAVHGAV PPDPDPFVDL LPASGVQLTP RHYSYLKISE GCNHKCKFCI
181 IPDMRGKLAS RPAHAVLREA EKLVDNGVKE LLIISQDTSA YGLDRKYDTN LWKNREVRSH
241 ITDLARELGQ LDAWVRLHYV YPYPHVRELI PLMADAGCNL LPYLDIPFQH AHPDTLKRMA
301 RPAAAARTLD EIAAWREICP EITLRSTFIV GYPGETEAEF QTLLDWMDEA QLDRVGCFQY
361 ENVAGARSND LPDHVPAEVK QERWDRFMAK AQAISEAKLA ARVGQVIEVI VDEVDDEAAT
421 CRTKSDAPEI DGNLFIDEGF EGLQPGDIVT VEVDEAGEYD LWGRLR
SEQDB ID: 3101377AW
Reference:
3101377
Name: alkylated DNA repair protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNLRGVEIR KGALDGPAQA RLIEALRPVL KAAPLFTPTM PNGKPLSVRM TSAGSLGWVT
61 DKGGYRYQPT HPKGMAWPAI PPEVLDLWHG VTGQDRAPDC CLINYYGEGA RMGLHQDRDE
121 ADLTWPVVSL SLGDDALFRI GNTSRGGKTE SVWLNSGDVV VMGGPARLIY HGIDRIRFGS
181 SRLLPKGGRL NLTLRVAG
SEQDB ID: 3101377AWA
Reference:
3101377
Name: AsmA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWIVRIGIT LVLAAVVMIG ALLLLPGDRL ARLAIEQIRK QTGREVTVAG EVKLSFWPVL
61 GVETGPVTVA NADWASAAPM LQAQGLAIGV AAPALLGGEV RITRILAQDP VLRLETAKGR
121 VNWEFSPTGA SGGAATPSGG GSGGQLVTLD GLDLRNARLI YVEEGKTSFD FGGVDLSASW
181 PATDAPLKME ARLEPGAGPI SVDLDLADLS AFSNGQVSAM QMKMTAPKTS ITFDGRASID
241 GALAGAAVLD TSDSAAMLAA FGQAGISLPR GLGQRADLRA QITYTADGRL ALRELAADLD
301 GNRLNGAADV TVADPPQVTA RLTAGALDLT GLAAAGGTGS GRSDAASGWS EDAIDASALA
361 LANGMLHLSA GSIALPGLEL GQSVLSLSLD NSRAVVDMAP VSLFSGQLTG QVVANNRNGL
421 SVGGDLRAEG IEMREALATL GGIERLSGAA SGQLKFLGVG ASEAQIMRSL SGEGRLAMGR
481 GVIAGFDLDN LMGRGAKGGG TTVFNSLTAS YRMDKGNLFN EDLLMLLDNF KANGTGRVGL
541 GARDIDYLFT PVALRANAGQ GLSVPVRIVG PWADPSIRPD LSQVIEAATG LDKEAVDTKA
601 KDELRRKLGE ELDTEITPDQ NVEELIKDRL EKEATKGLLK LLGAD
SEQDB ID: 3101377AWB
Reference:
3101377
Name: phosphomannomutase/phosphoglucomutase, Class: EC5.4.2.8;EC5.4.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: algC
Sequence:
1 MIRPTGFREY DARWKYPEEI NLPGMTALGL GLGTQMHRRG IAPVIAVGND YRDYSLAIKN
61 ALILGLMQAG IQVKDIGPAL SPMAYFSQFH LDVPAVAMVT ASHNPNGWTG VKMGFDRPLT
121 HGPDEMAELR DIVLNGEGVA RPGGSYEFVD GVKEAYIDDL VGDFRMSRPL KVVCATGNGT
181 ASAFAPEIFA RMGVEIVPSH NELDYTFPNY NPNPEAMEML HDMADTVKAS GADFALGFDG
241 DGDRCGVVDD EGEEIFADKV GVIMARDLSK LYPGSTFVAD VKSTGLFAAD PELQKHGAKA
301 DYWKTGHSHM KRRVKEIGAL AGFEKSGHYF LAEPIGRGYD CGMRVAVEIC KLMDRNPEMS
361 MSDLRKALPR TWSTPTMSPY AADTEKYAIL ERLVEKLVAK HAAGDSFAGR AIKEVVTVNG
421 ARVILDNGSW GLVRASSNTP NLVVVCESSE SEAEMRAIFA EIDEVIRTEP GVGDYDQTI
SEQDB ID: 3101377AWC
Reference:
3101377
Name: 3-deoxy-8-phosphooctulonate synthase, Class: EC2.5.1.55
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kdsA
Sequence:
1 MKHVQIADLT VGNDLPLTII AGPCQLESAD HAQMIAGTLK EACDAAGAQY VFKASYDKAN
61 RTSLGGKRGM GIDAGLKVLD DIRRTMGVPV LTDVHSEAQC AIAAEAVDVL QIPAFLCRQT
121 DMLLAAGNTG AVINVKKGQF LAPWEMGNIV DKIASTGNEN ILLTERGVSF GYNTLVADMR
181 ALPIMAQTGY PVVMDATHSV QQPGGRGGSS GGQREFAPVM ARAAVAVGTA AVFMETHQDP
241 DNAPCDGPNM IYLDEMPGLI DTLMRFDALA KANPIQI
SEQDB ID: 3101377AWD
Reference:
3101377
Name: capsular polysaccharide export inner-membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kpsE
Sequence:
1 MLPSTELSPT QRREMEIGRI QQDIMRRRRR KMMQLLTRLA FFVFLPTLIA GYYFYVVATP
61 MYASKSEFVI LQADGSLGGV GGFFAGTQFA TSQDSISVQS FLESKEAMLL LDRDQNFKAH
121 FQQAEIDPIQ RLAPDATNEE AYKVYSRIVT IGYDPTEGVI RMEVAAPDPQ VATDFSNSLL
181 SYAESRVNNL SGQKREDQMR EARKSFEDAQ KERRKAQEAL VELQQQGALL DPESVIASLR
241 GRIDQVEVQL QEKELQLAAL LDNPRPSKAK VDGARADIAR LNDVLDDLNA RMLDTSSGEN
301 SLARLSVRIQ MAQADLASRD MMLQGALQQM ETTRMEANRQ VRYLTISVNP VPSDEPSYPR
361 SFENTILAFL LFAGIYLMIS LTASILREQV SS
SEQDB ID: 3101377AWE
Reference:
3101377
Name: capsular polysaccharide export ATP-binding protein, Class: EC3.6.3.38
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kpsT
Sequence:
1 MWPDRHAKHL TLGRSRQQML EFENVSKSFW TGTQRKVILD RVSFRVELGK SMGILAPNGT
61 GKSTLINMMA GLEKPDEGVI RRGCNISFPL GFMGGVVGRL SAMENSRYIA RLYGMDPDYI
121 EAYCRWLCGL GEYFDQPLGT YSSGMRARFS FALMLALDFD MYLIDEGMPA STDVEFNKKA
181 GAILEERLRT TTIVIVSHQP ATLEQFARQA AVLMDGQLHV FDTLEEAKQL YDYQTQG
SEQDB ID: 3101377AWF
Reference:
3101377
Name: uracil-DNA glycosylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPADRPLI ERIRACRLCA DRFAATHTAH EPRPVVWFRP GARLLIAGQA PGARVHASGR
61 PFTDPSGDRL RDWLGIGEET FYDRSRVAVV PMAFCFPGYN SQGADLPPPP VCGKTWHNQV
121 MGELGEMPLS VLVGGHALKY HLGARSPVTE TVAAWRDHAP RVFALPHPSW RNTGWLRKNP
181 WFEAELLPVL RARVKEVLNE PDRSANPD
SEQDB ID: 3101377AWG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQTGAQTPI DRAHAEMETS DTARLRFFER LGDAELFLLL TEEARGENLS PELFDLADGR
61 FVLAFDREER LAAFAGRPAP YAALSGRVLA AMLAGQGIGL GLNLDVAPSA MLIPAEALAW
121 LAETLGHGPD QVEARITEVT APGGLPEALL SALDAKLVTA AGLAQGAYLA GVVYQDGGRG
181 HLLGFVEARE GAEPALAKAA SEALTFSGIE AGAMDVGFFT AADPMAATLS RVGLRFDLPE
241 PPEPPRGPAA PGMDPDAPPR LK
SEQDB ID: 3101377AWH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDHDRAVIG PQRLGQQGAV GLVLQAQLPD LERHLVRPRR RDVDAIARRG LLADRQAVRR
61 GRGMRERGRE LRADPEQRLV DAAAADAHGQ AQCLGETVGL GIGAGIARGH RDRAVIGVAG
121 VQLSGADLLP EIAGADRHIG GAYTDGGDPQ PLLAAVRNHD GVLALHHLGG IQHKGLVMPV
181 LVGDELVGYH LLPVDRNADV ALAAGGVGVR HPGAGDGQSD IGRLGQLQRE IGAAARLQVP
241 EPGRGREPAV ERHAEQRGTR GVGGVEGDGL RRHQLRTGIL EQRRRGRALG KDAIAARAGG
301 RGRHGPAKDR IREIRARIEQ HAGKVLRHRH VHMVSPETLD QRRIVAPCHR DDRIGPAAQR
361 RAARDFRLFR NEKTGPQQGA VRSCDLAHSG PSPGWVEGAK GPDSVWHFPK MPRIFGRPLA
421 QLGFDSSLSW VRVSKSLASW RSRSWYFGSP ETRLTMRPRL TPGRASSSRA QRITWV
SEQDB ID: 3101377AWJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEHTPYTPP RVWTWDKENG GQFANINRPI AGATHDKELP VGKHPFQLYS LGTPNGVKVT
61 VMFEELLAAG HAGAEYDAWL INIGEGDQFG SGFVDVNPNS KIPALLDRSG PEPVRVFESA
121 SILFHLAEKF GAFLPASGPA RTEVMNWLFW QMGSAPYLGG GFGHFYAYAP EKFEYPINRF
181 AMEVKRQLDV LDRQLAQHPF IAGEEYSIAD MAIWPWYGQL VLGRAYDAAE FLDAESYTHV
241 MRWARELDAR PGVSRGRMVN RVSGEPKYQL RERHDASDFD TRTQDKLESN PS
SEQDB ID: 3101377AWK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRLVLALAA AVMTALAAPV LAGPQYLDGT GFAVSGYDVV AYRGLAQAPV GQAQPEAVKG
61 RADITAEWNG STWAFASADN RDKFLANPAY YAPQYDGHCA YGVSKGGKVP GNPNLWRIVD
121 DKLYLNITKN VVGFWEEDIP GNINKAQGNW PGIETKAAST SVIPDFTSAA PVKN
SEQDB ID: 3101377AWL
Reference:
3101377
Name: amidohydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFPTDRRSVL RVLLWGSAAF LPSHSARALT NSLSDLGGTM VQNADAVIYT AREVVTLDPA
61 RPTAQAVAVL GDRIHAAGTL SEVTAALDGH PYRVDDRYSG HVIVPGFIAQ HDHPILAALT
121 MASVILSIED WVLPGGTVPA VRDKADFIAR LTEAVSAAPT ADEPILTWGY HPSFYGRLTR
181 SDLDAISTQQ PILAWARSCH EMVLNSAALA RGGVTADTVA GFSDTAQEQS NFDEGRFWEQ
241 GFFAVLPNIG SMVASPERLR AGLELSRDYM RAKGITIGNE PGGILSKQVQ DGVNAVFGAA
301 DMPFRWSFMA DGKSLIAAQP DDARVIADTE ALAGWYGGMT SLAPKQIKLF ADGAIYSQLM
361 QVRDPFLDGH KGEWMMDLDQ FQRAFRVYWD AGYQLHVHVN GDAGLDRVLD TLETNLRRTP
421 RDDHRTTIVH FAVSGADQVL RIRDLGAIVS ANPYYVAALA DNYGEVGLGP DRADNMVRLG
481 DVEAAGISWS LHSDMPMAPC DPLFLMWCAV NRVTSSGRVA GPAQRVSAET ALRGVTINAA
541 YSLKLEHEIG SIEPGKRANL TILGDNPLTV DPEKIRDIAV IGTVMEGRDF PAQSDRRKAS
601 LDMPRNPEAS QEFAVAALDH AMRVAHGHEG N
SEQDB ID: 3101377AWM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWTDERVEL LKKMWGEGQS ASQIAKELGG VTRNAVIGKV HRLGLSNRSS GAAPASTKAE
61 TKEKPAAATP RAEAKPKPAP RPEPLRAAPD PAPAPQPAEI KPIPARKQII PAGQPLPPQP
121 SANEISPEAL AKVNEVEKKA KKLSLMELTE RTCKWPVGDP ATEDFWFCGL PVQQGKPYCE
181 AHVGVAFQPM SSRRDRRR
SEQDB ID: 3101377AWN
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELGMRRFGR VNWLGLYTLA AREVMRFLVV WTQTLLAPLV TAGLFMMIFS LAVGSGRGAV
61 MGVPFLTFLA PGILMMTVIQ NAFANTSSSV VISKVQGNIV DTLMPPLSAL ELLLGYLAGA
121 VVRGLLVAVA IAAALVLVLG IVPAHPLLAL GFVVLGAGFM GALGLVAGIY ANKFDQMAAI
181 TNFIVTPLAF LSGTFYSVEA LPPLLERLTH ANPVFYLIDG LRFAVIGVSD SPPALGLTVC
241 LGATGAVCLL AWVLLKRGYR LKA
SEQDB ID: 3101377AWP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHERRIPEWV RHSPAPSVRD FGLLAGLEAV VRGILISVFP LIMYRALGDA ERVSMAYFLI
61 GFLSLGAGLM VPGLIRYLPR RWAYSAGALL FVAGAGLAVQ GTPLTTIAAL ACNTVAAVVC
121 FICFNAYVLD YIERVELGRC ETSRMFYSAL GWTVGPMAGV LLMEIWPPAP FVISGVAALA
181 MLALFWALRL GNGKMITRAR RPARNPLAFL PRFFAQPRLV AGYLFAMIRS CGWWVYVVYL
241 PIFAIESGLG DQLGGIMLSI TNGMLFAAPL ILRWVQARSL KSAVRTGFAG AGLCFATAGL
301 LSGWPPLAAG LLMLGSFWLI VLDICAGLPF LMAVKPSERT EMSAIYSSYR DVSGILTPGV
361 AWLVLLAAPV AGIFVAGGAG LFGAFTIAAR MHPRLGRPRI RLEPGSLADA
SEQDB ID: 3101377AWQ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRASVTIGA RRNGAIKAAA HARIRPVANS SCLAISRQMQ HRYTMFEPKP QNPALAAALI
61 FAATAFIAGT TLLAKALGTG ALGPALPALQ ISHGRFLFAL AVILSIVAAT RPRLSRPHWG
121 LHLGRTSFGW AGVTLMFAAV AYIPMADATA IAFLNPVFGM LLAIPLLGER VGPWRWGAAV
181 IALVGALILL RPTPGSFQPA ALLALAAAAV MGMELIFIKK LAGRERPIQI LLVNNAMGLA
241 IASLAVWPVW QAPLPAQWAA LAGIGLLMAC AQICFVNGMA RADASFVAPF SYGTLVFAAL
301 YDLAVFQVWP DAISLGGAAI ILTGALTLAW REGRVRRP
SEQDB ID: 3101377AWR
Reference:
3101377
Name: transcriptional regulator, Isotype: MerR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIGELARRS GLSRDTLRFY ERQGLIQSEP GAEATNSYRD YPEEALITLD QIADAQAAGM
61 SIADLAMLMG QLQAADPDGF DGEAFLDARI VEVEARITRA ERFLDSLRQA RAALAATPRL
121 R
SEQDB ID: 3101377AWT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQTCQSCGM PLSKDPAGGG SEADGARSTK WCSLCYENGA FRHPDATYEE FQAHCVEALV
61 GQGMPRILAW AFTRGMKRLD RWRAA
SEQDB ID: 3101377AWU
Reference:
3101377
Name: Ac-Orn aminotransferase, Class: EC2.6.1.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argD
Sequence:
1 MIPSVLPTYT RAPLHFVKGE GAWLTEADGR RFLDLGAGIA VNALGHAHPA LVKALTDQAQ
61 NLWHVSNLYH IPQQQALADK LVEHTFADTV FFTNSGTEAC ELAVKMARKY FYDKGQPERV
121 EIITFDGSFH GRSSAGIAAA GSEKMVKGFG PLLPGFVHLT FGDLDGVTNA ITDKTAAILI
181 EPVQGEGGIR PVPDADLKAL RQICDDHGLL LILDEVQCGV GRTGRLFAHE WAGITPDIMM
241 VAKGIGGGFP LGAVLATEEA ASGMTVGTHG STYGGNPLGC AVGCAVMDHV ADPDFLAEVN
301 RKAALLRQRL EGLIATHPNV FEEVRGSGLM LGLKCKASNL DVVKAGFDNL VITVPAADNV
361 VRLLPPLTLT EEDIAEAFTR LDAAATQVDA A
SEQDB ID: 3101377AWV
Reference:
3101377
Name: Orn carbamoyltransferase, Class: EC2.1.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argF
Sequence:
1 MNHFLDIHKT DAADLRAMID QAGAMKQARL GRPKAAPDDE QPLKDRMVAL IFEKPSTRTR
61 VSFDVGVRQM GGQTMVLSGN DMQLGHGETI ADTARVLSRY VDMIMIRTFD ESVLAEMAEY
121 ADVPVINGLT DRSHPCQIMA DVLTYEEHRG PIAGKKVVWT GDGNNVCSSF LHAAGQFGFD
181 LTFSGPAQFD PEEEYMGFAR QKGSKIVIER DAVKAVEGAD LVVADTWVSM HDAQSAKERR
241 HNLLRPYQVN AELMRHAKPD ALFMHCLPAH REEEATSEVM DGPHSVIFDE AENRLHAQKA
301 IMRWCLGA
SEQDB ID: 3101377AWW
Reference:
3101377
Name: Ac-gamma-Glu-phosphate reductase, Class: EC1.2.1.38
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argC-1
Sequence:
1 MTYKVFIDGE AGTTGLQIRA RLEGRDDIRL ITLGDADRKD TRARLAAFDA ADVGILCLPD
61 AAAVEIVAQL AGTGTRLIDA STAHRVDPGW VFGFAELDND LRARIAGGQF VSNPGCYSTG
121 AIALLHPLVK RGLIAADQAL AINAISGYSG GGKAMIAEFE SGKTDGPFVY ATEQRHKHLP
181 EIVAHAGLTR QPVFVPSVGP YEQGMIVQVP LPFVEPGQGA AIEAALADHY ATSRFVSVVS
241 PDHYGARIDP RRLNGTNQLE LSVHGNLDTG GAVLLALLDN LGKGASGAAV QNLNIMLGLD
301 EGLGL
SEQDB ID: 3101377AWX
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAVDLLLTR LEGEYAITRR PSAAPLPGWQ EGPGLISVTR APDETSILCL SERVPEGETT
61 ARGWQALRVE TLAALDQPGV VLAAVEPVSR SGLGVFVTST HDRDYLLVRA GQAARAEAAW
121 IAAGHNVCEG GVTLRRAGPQ DAEALATLHF QVWQETYARI APPEVRLALN KVRRTAYWRD
181 RLASGDDTVI ALRDGVAVGL AALSPSGVEE FDGCTELDHL YIAASARRSG LGARLLGLAR
241 AQAALAGAPR LILAVVRDNA PARAFYQAQG GAVLAERQDK GPLWRSDNLI FGWATA
SEQDB ID: 3101377AWY
Reference:
3101377
Name: 2-dehydropantoate 2-reductase, Class: EC1.1.1.169
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: panE-1
Sequence:
1 MRIVIAGAGS IGCFCGGLLA LGGHDVTLLG RAPLLARIGA HGLRLSDYGG LDLHLGADRL
61 TLATDPACLA QAELVIVTVK TPATAEMASA IATHAPASAP VLSWQNGLEN TRQLRARLPG
121 RDIRAGMVPF NVVPLGEATW HRASSGDIVI AAGPGGLGAA LTVPGLPVAE SLRIEAVQWG
181 KLVINLNNAL NALSGLTLVQ QLADRSWRRL MAAQMAEALA VLRAAEIPVA ATTPLPAWTT
241 PHILRLPNTL FTRIAARMLT VDPSARSSMA YDLEAGRMTE IASLQGEIIR LGRAHDVATP
301 ICSRVAALID AATHDGAGPP RLTVAQIAPP G
SEQDB ID: 3101377AX
Reference:
3101377
Name: chaperone protein, Isotype: DnaK
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaK
Sequence:
1 MGKVIGIDLG TTNSCVAIMD GAQPKVIENS EGARTTPSIV AFTDEERLVG QPAKRQAVTN
61 PSNTIFGVKR LIGRRVDDAE VTKDKKMVPF TIVNGGNGDA WVEAKGEKYS PSQISAVILG
121 KMKETAESYL GEEVTQAVIT VPAYFNDAQR QATKDAGKIA GLEVLRIINE PTAAALAYGL
181 DKKNSQTIAV YDLGGGTFDV TILEIDDGLF EVKSTNGDTF LGGEDFDMRI VNYLADEFKK
241 EHGVDLSGDK MALQRLKEAA EKAKIELSST TQTEINQPFI SMGANGQPLH LVMKLTRAKL
301 ESLVGDLIKK SMDPCKAALK DAGISPSDVD EVVLVGGMTR MPKVFEEVTK FFGKEPHKGV
361 NPDEVVAMGA AIQAGVLQGD VKDVVLLDVT PLSLGIETLG GVFTRLIDRN TTIPTKKSQV
421 FSTAEDNQNA VTIRVFQGER EMAADNKILG QFNLEDIPPA PRGMPQIEVT FDIDANGIVS
481 VSAKDKGTGK EHKITIQASG GLSDEDIEKM VKDAEENAEA DKARKELVEA RNQAESLIHS
541 TEKSVEEHGD KVDPTTVEAI ELAIAALKDD LDKDGVSAEK IKSGLQNVTE AAMKLGEAIY
601 KAQSEGGDDE PAAADARPSD DDIVDAEFED LGEDKRK
SEQDB ID: 3101377AXA
Reference:
3101377
Name: phosphate transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDRKSKPQW GRLDADLNRI SRMETATAYA SRPLVGTGIA LAFIVLAALA AMVALGGTPG
61 GIVVVAAAAF GAYMAINIGA NDVANNMGPA VGANALSMGA AIAIAAVAES AGALLAGGDV
121 VSTISKGIID PQSVADTQVF IWAMMAALIS SALWVNLATW VGAPVSTTHS VVGGVMGAGI
181 AAAGMSAVDW STMSAIIASW VISPLLGGVI AALFLALIKH RIQYAPDKIA AARRWVPILV
241 AVMAGTFAIY LSVKGIKKIV KIDLQTALMI GLATALLVWA VTIPWIRRKS EGMENRTKSI
301 KALFGLPLVL SAALLSFAHG ANDVANAVGP LAAIVHVSQA GSFAAKVAIP FWVMVIGAFG
361 ISFGLFLFGP KLIRMVGSQI TKLNPMRAYC VALSAAITVI VASWLGLPVS STHIAVGGVF
421 GVGFYREWHS ERRLRNGRNS RPPAQRLPLE ERRRRKLVRR SHFMTIVAAW VITVPAAALM
481 SGVIFSILNS FV
SEQDB ID: 3101377AXB
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSRVLNAWT ELVRPMFLRP KRTQVAALCL RPATGGPEVL LITSLDTGRW IVPKGWPIEG
61 LSGPETALQE AWEEAGVRRA RVEDEPVGVF GYGKRRKNGT VEPVETYVYR MLVDEISDSY
121 PEAGRRKLRW VAPSEAANMV QEPQLQDLLR QL
SEQDB ID: 3101377AXC
Reference:
3101377
Name: aquaporin, Isotype: Z
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: apqZ
Sequence:
1 MTNKLIAEVF GTFWLVLGGC GSAVLAAGVA DVGIGWAGVS LAFGLTVLTM AYAVGHISGG
61 HFNPAVSLGL MVAGRFDGKL LLPYWAAQVV GAILAALVLY IIVSGGAGFT GVGGFASNGY
121 GEASPQGYSM MSGLVIEVVL TAFFLIIILG ATSKGAPAGF APIAIGLGLT LIHLVSIPVT
181 NTSVNPARST GVALFADGPA LAQLWLFWVA PLIGGALGAV LWKVIAGKDA D
SEQDB ID: 3101377AXD
Reference:
3101377
Name: oxidoreductase, Isotype: GMC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEQLAGDYD YIIVGGGTAG CVLANRLSAD PKTRVLLLEA GGKGHYHWVH IPVGYLYCIG
61 NPRVDWMMKT AAEPGLNGRS LVYPRGKVLG GCTSINGMIY MRGQAADYDG WRQMGNTGWG
121 WDDVLPYFRR SEDHHKGESD LHGAGGEWKV TTQRLSWEIL RAFQEGAREF GYEPTEDFNS
181 GTNEGSGFFE VNQRNGVRWN TTKAFLRPAM NRPNLRVLTR AETQRLILDG KRVTGVAFRH
241 GGQDRTATAR AEVLLAAGAI NSPKLMELSG IGQPDRLSAL GIAPVHDLPG VGENLQDHLQ
301 IRTAFKVSNT PTLNETANSL TGRIGIALKY ALTRSGPLSM APSQFGMFTK SDPALETPDL
361 EYHVQPLSTD RLGDPLHAFP AITVSVCNLR PESVGDCHIT SAKTGPQPHI RLNYLSAPRD
421 QQVAVAAVKQ ARRIMTARAL APYAPQEFLP GPQIASDADL LREAGNIATT IFHPVGTCKM
481 GNDPMAVVAP DLRVHGLAGL RVVDASIMPK IVSGNTASPV IMIAEKAAEM IRAL
SEQDB ID: 3101377AXE
Reference:
3101377
Name: ATP-dependent helicase, Isotype: HrpB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hrpB
Sequence:
1 MTRLPIDDAL PDLISALRAQ GRAVLQAPPG AGKTTRVPLA LLSAGLTNGR IVMLEPRRLA
61 ARAAAERMAE TLGEPVGQTV GYRIRGEAKR TNATRIEVVT EGILTRMLQA EPDLPGIGAV
121 IFDEFHERSL NADLGLALCL EVTEALRDDL ILLAMSATLD AGPVAALMDA PMVTSQGRAY
181 PVETRWLDHP LGPRARRVEA LADLVAKAEA ETRDLGGSLL VFLPGEGEIR RAQTLLSARL
241 PDSCTLRPLF GAMPFAAQRA AIRPATEGRN VVLATSIAET SLTIPDVRVV VDMGQARRAR
301 FDPGSGMTRL VTERVTRAEA TQRAGRAGRV AEGICYRLWT RGEEGALAAF PPAEIEAADL
361 TGLALELALW GAEPGALGFV TQPPETALAE ARALLGFLGA IDAQGRITDH GRVLAALPLH
421 PRLGHMLALA GREAAPLAAL MAERDPLRGA PADLDLRLAA LRDPSRFRRE RPYEVNMGVL
481 DRIRAEARRL EKQAKTPAGR MSPAAMAALA YPDRIGQRRK GEAPRFVLSG GKGAALDPGE
541 ALANTPYLVA IDTDGDPREA RIRMAARITE GELRELFADQ ITRNDLCEWS RRERRVIARH
601 QERLGAITLS DRIWKEVPDE AVARAMLDGV RDLGLRLSAP AARLARRVEL VRASGADLPD
661 FSEPGLMGTI EDWLQPMLQG VRSAEDWKRF DLLPALKARL DWGQSQELET RAPGAFITPL
721 GRKVPIDYER EVPEISVRLQ EMFGVTQHPM VAGVPLKITL LSPAQRPIQI TRDLPGFWDG
781 SYADVRKDMR AQYPKHPWPE DPREADPTLR AKPRKG
SEQDB ID: 3101377AXF
Reference:
3101377
Name: LAO/AO transport system ATPase, Class: EC2.7.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDITQLGDRI LSGDRRALAR AITLVESRRD DHRAQAASLL DHLAGAGRQA LRIGLSGTPG
61 VGKSTFIESF GMMLIGQGLR VAVLAVDPSS ARSGGSILGD KTRMERLSRE RAAFIRPSPS
121 QSHLGGVARR TREAVSLCEA AGFDVVLIET VGVGQSETVV AELSDLFLLL LAPAGGDELQ
181 GVKRGIMEMA DLILVNKADG ELKSTATRTC ADYAGALRLL RKRVQDPPGF PKALTVSAVE
241 EQGLDAAWTE MRALSDWRRE NGHWTANRAE QARYWFGQEV RHALLAQLDT PQARAEMDRL
301 STAAAQGQLT PASAAEQMLA FLREG
SEQDB ID: 3101377AXG
Reference:
3101377
Name: ribosomal protein L28
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmB
Sequence:
1 MSRRCELTGK GPMTGNNVSH ANNKTRRRFL PNLNDVTLQS ETLGRGVKLR ISAAALRSVD
61 HRGGLDAFLA KAKDEDLSDA ALKVKKEIAK AQAAA
SEQDB ID: 3101377AXH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEIGPLTDRR PAVAGGLLPL RSGYREQISG RRMMTPLRIS LALALSLLVG LTGQGLANSR
61 GMSAAVDQME ICTGTGPVIL YVDADGQPTA PPHYCPDFAL MLLGALLPDA AVAPTPPQLA
121 LPAPDRTQPS LITRTLSAVP ARAPPVLL
SEQDB ID: 3101377AXJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLKSRLLAA AATLTLAGAA WAGETIVIDD AYARSSGANA KAGAAFMMIQ NTGAEDDRLI
61 DARSEVAARV ELHTHKINEQ GVAKMMHVPE GFVIPAGGMH PLARGGDHVM FMGIKVPFAQ
121 GATVPVTLVF EKAGEIEVEI PVDLERQDGG HGHMKKKSN
SEQDB ID: 3101377AXK
Reference:
3101377
Name: Orn cyclodeaminase/mu-crystallin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGVRPAGPKG MSDFLILSDP DLDTLGITTD EIQTALEAAI RAQIRATVHV APKSALLPGD
61 GRYVMTTLAT GNSPALTVVK SVMVSPDNPA RGLPGTEGVL LVQDSETGQL RALMQAGWIT
121 RMRTAGLSAL VARRLGDPAA RVVAFIGAGA QARAHLAALC DLFPLQRAVI LGRGAENIAR
181 LSAAARARGL QAEIADNPHQ AIADADLVVS SVTLDHQMTP FLDARWLKPG AFASLTDTGL
241 PWQPDGMAAL DPLYIDDLAQ EAANPRPMID PARVGGDLAA LLGEDLHSTN VNRHDPSRRA
301 GFLFRGPAIA DFALAALALH RAQSLGAGRD TAWPDATRPG QSPA
SEQDB ID: 3101377AXL
Reference:
3101377
Name: CobB protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKIVILTGA GISAESGLGT FRDADGIWTK YPLEDVATPE GFARDPELVH TFYNARRVQA
61 AAARPNAAHT ALARLQRDWP GEVVIVTQNV DALHEAGGAS DVIHMHGTLA GALCAICGHR
121 WLAPETMDTT TPCPACARPA ARPGVVWFGE MPYFMDAIYD HLASADLFAA IGTSGQVYPA
181 AGFVQEATAC GARTVELNLD PSAVVSNFDE TRFGPASRIV PQWVCDLLDQ RG
SEQDB ID: 3101377AXM
Reference:
3101377
Name: low MW Tyr(phospho) protein phosphatase, Class: EC3.1.3.48
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHRILFVCL GNICRSPAAE GVFRALMPEV GTDSAGTGGW HVGEPPYGPM RAAAAARGID
61 LSDLRARQFV AGDFGRFDLI LAMDAQNLAD IEAQRPAGNG IPVRLFTDYA PESGATHVPD
121 PYYTRDFDGA LDLIEVAARG LRQRLAEGAL LPL
SEQDB ID: 3101377AXN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGVTLRGLE VFEALSRTGS VAQASTLTGL SQPAVSQQLR NLEQALGTDL VDHGRRPMVL
61 TPAGRAFLPR AETVLSQLRL AQSELTVMDL THLSTLSMGL IDDFDNDLTP RLATLLADSL
121 TKCRFKLITA PSHEISEAMK ARRLHIAVAA TSGEVHDGII EYPLVRDPFI LVAPRGVVSK
181 GGDMLASLQG LPLLRYAREQ LIGRQIEAHL ARQKLDFEER FEIGSHLALM AMVARRLGWA
241 VTTPLGFMRA ERFHDEVEAF ALPFAAFSRR ISLFAGADWA DRVPRDVAET MRRLVQSQII
301 DPAVARLPWL GGELRVIES
SEQDB ID: 3101377AXP
Reference:
3101377
Name: His-ol dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTITVLKSAP GLPPAPQGDA ADVVQVMLAR LRAEGEAAAR DYAARLDGWS GEIVVSPDQV
61 ARASEQVPED LKTQIRYAHD NIRRFAEAQR ASALDFQTEL RPGLIAGQKQ IPLAAAGAYV
121 PGGRYAHIAS ALMSIATARA AGVGQITAVS PPQVGRGVHP AILYAMSLAG ADRILALGGV
181 QGVAALAFGL FGAPPADILV GPGNQFVAEA KRQLFGPVGI DMFAGPTDSL VIADSTADPL
241 TVAWDLVGQA EHGYNSPVWL VTDSAALAEA VLAHIPGCIA DLPEPNRSSA QAAWDALGEV
301 ILCTDREEMA ATADRYAPEH LHVQAADLDW WRGRLSAYGS LFLGELTTVA FGDKASGPNH
361 VLPTSGAARY TGGLSVHKFL KTVTWQQVAP QALPDLARAT ATISRAEGME GHARTADIRL
421 EKLRPTLRQV GTG
SEQDB ID: 3101377AXQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTRAPPGKL TRDRVRGDMG DVNNEEELEE FLRALPHRAR VGFAARAALR VAPYTFRYRD
61 HVDENFDGSV FLLACLRANL VSGVAGTWPT HDTREIVSAA RSAASAARSA LSAARSALSA
121 AHPADSAALS ARSARSALSA ALSADSADSA ALSARSALSA ALSADSAARS AALSADSAAR
181 SALSAALSAD SAALSADSAA LSAAPDQSQQ IFATPLWPAQ VPEKVSEAVE TFEEAAPGTP
241 WAFWARWYRG MFDGKPLDWE LQRQVALIDD AIWKAGPKAV AQEIARIERL FELEHEIAAL
301 KATLPPRMAL SSTSLIGDNG GPPLNDGVQQ AVRGDFVLIW DQIEALEAEI TKPEPSLGKL
361 KKIAKALLDI SVRIASYCGG KIDLALTEAS KEAGKAVVKL GAPIAVASLA AQNEGIQQVA
421 KAIWAFVKTL PPG
SEQDB ID: 3101377AXR
Reference:
3101377
Name: GTP-binding protein, Isotype: LepA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lepA
Sequence:
1 MTDLAHIRNF SIVAHIDHGK STLADRLIQE TGTVQDRDMK EQLLDAMDIE RERGITIKAN
61 TVRIDYTADD GQAYVLNLID TPGHVDFAYE VSRSMRAVEG SLLVVDSTQG VEAQTLANVY
121 QAIDADHEIV PILNKIDLPA SECDRVAEQI EDVIGIDASG AIRVSAKTGV GIHETLEAIV
181 KHLPAPKGTR DAPLKAMLVD SWYDSYLGVI VLVRIMDGVL KKGMRVKFMS NGTLHHVDRI
241 GVFRPAMQMI DSLGPGEIGF LTASIKQVRD TRVGDTITND RNGTEVALPG FKPAQPVVFC
301 GLFPVDSAEF EDLRDAIEKL ALNDASFSYE METSAALGFG FRCGFLGLLH LEVIRDRLER
361 EYDIELITTA PSVVYHVFMK DGEMRELHNP ADMPDLSKVD HIEEPRIKAT ILVPDEYLGD
421 VLKLCQDRRG IQQDLSYAGS RAMVVYDLPL NEVVFDFYDR LKSVTKGYAS FDYQLTGYRE
481 DSLVKMSILV NDEPVDALST MVHRDRAEAR GRAMCEKLKD LIPRHMFKIP IQAAIGGKVI
541 ARETLSALRK DVTAKCYGGD ATRKRKLLDK QKAGKKKMRQ FGKVDIPQEA FISALKMDS
SEQDB ID: 3101377AXT
Reference:
3101377
Name: Zn ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: znuB
Sequence:
1 MMLDDFMIRA ALAGAGVALA SGPLGCFVVW RRMAYFGEAT AHAAVLGVAL ALALSAPILP
61 AVVLAAVLMA SAVTLMRGRG YAMDTALGVM AHTALAAGLV AVSLLADVRL DLMAFLFGDI
121 LAVSRGDLAV IWGGGALVLG LTLWRWSDLL IATLNPDLAH AAGVDPRRAE TWLTLALAVV
181 VAVAIKVVGV LLIAALLVIP AAAARPLSGT PEGMALGAAG IGGLSALAGL YGAYLFDTPA
241 GPSIVCVAAL SFIVTTLARG LVRGR
SEQDB ID: 3101377AXU
Reference:
3101377
Name: Zn ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: znuC
Sequence:
1 MNTPVIAAEG LSIRVDGRTV LADISVAVAA GEIVTIVGPN GSGKSTFLRA LIGALPAASG
61 RVIRAPGLRI GYVPQKLAID ATLPITVSRF LSLPRRVPQD VAAEALARAG VPDLANRQMT
121 DLSGGQFQRV LLARAVLERP HLLLLDEATQ GLDQPGSAAF YEQIEEVRQD LGCAVVMVSH
181 DLHVVMAASD RVLCMNGHIC CEGTPEVVAD APEYRALFGT GTRGALALYR HQHSHRHDDD
241 CGHDHGAEHM HPHGDR
SEQDB ID: 3101377AXV
Reference:
3101377
Name: Zn uptake regulation protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: zur
Sequence:
1 MTAKGFERHD HSQCIATALH QAERHCAAHK LQFTPVRRRV LEILLDRHRA MGAYEILDIL
61 AADGLGSQPP VAYRALDFLV QNGFAHRIER LNAYTACAHP EEDHVPAFLI CRNCKAVAEA
121 GTELEQGRLG KAAAEAGFTI ERIVVEAEGL CPGCAGQAA
SEQDB ID: 3101377AXW
Reference:
3101377
Name: Zn ABC transporter, Subunit: periplasmic Zn-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: znuA
Sequence:
1 MPMTRLSLSA LLLTCATPVL AEAPRVAVDI APLHSLVAQV MAGVGEPDLI VRPGASPHSY
61 ALRPSEARAL QQADLVIWVG DDLTPWLEKP LMALSDAGRQ IALLDHPSTA RLAYRDLAHD
121 GHDDAHTQTG HDDHDHAQEA HETHDDDHDH SGTDPHAWLD PGNASAWLSL LAEELAALDP
181 GHADRYRANA AEAQARLAEL TIQIATELQP MQGKPFIAFH DAYQYFERPF GLTLAGTVSL
241 GDASSPSPAR LAHLREEVVE EGVSCAFSEP QYNTALLETA VEGTGAAIFV LDPLGAGLEP
301 GPALYPQMLR DMAASFAACA AQ
SEQDB ID: 3101377AXX
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVWLSDSQA VALVGLVGGI ALGLAARLGR FCTLGAIEDL LYGGSDVRMR MWVLAIGAAM
61 AGSFGLMGLG WLDPGQSYYL SIRWMPLASI LGGLMFGYGM ALAGNCGYGS IARLGGGDLR
121 AFVIVLVMGV FTYVTLAGPL APLRNLLFPQ IEVAGDLPPG LAHHAHALTG LPVHVIGIGI
181 GLILCLGALS SRDMRQEPKS IFWSLVVAAA IVGGWAGSYW VYQHGFDGLQ VVSHSFSAPV
241 GESILYAMTG SVRPLSFAVG SVAGVWAGAF IGSLIKGHFR WEACEDPREL RRQILGAAIM
301 GTGAVIAMGC TVGQGLTAFS LLAISAPVTF LAIFAGAALG LRQLIEGFSA AE
SEQDB ID: 3101377AXY
Reference:
3101377
Name: transcriptional regulator, Isotype: SoxR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLETQPGTA PGTRTRDMAL PQFSTDMADD ELDKMVDNAT TASNFLKAIS HEGRLMILCH
61 LVSGEKSVTE LEELLAARQA AVSQQLSRLR LEGLVIPRRE GKAIYYRLAD ERPRRILEVV
121 YDLFCNND
SEQDB ID: 3101377AY
Reference:
3101377
Name: chaperone protein, Isotype: DnaJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaJ
Sequence:
1 MSKRDYYDVL GVSKGASADE IKKAYRGKAK ELHPDRNKDN PDAESLFKEV NEAYEVLKDA
61 EKKAAYDRFG HAAFEGGMGG GQRPGGGFGS GDFSSAFSDV FEDLFGDFMG GQRGGGGRRA
121 ARGSDLRYNL RVTLEEAFSG LQKTINVPTA VACSSCEGTG AEGGVEPTTC PTCSGMGKVR
181 AQQGFFTVER TCPTCSGLGQ IIKNPCKSCR GQGRVEKDRA LSVNIPAGVE TGTRIRLAGE
241 GEAGMRGGPP GDLYIFVEVA KHELFERDGV NLYCRVPVSM AKAALGGAIE VPTIDGGRGR
301 VQVPAGSQSG RQMRLRSKGM PALRGGGIGD MFIELAVETP VNLTSKQKDL LREFDELSED
361 NNPETKSFFS SVKSFWDGMK G
SEQDB ID: 3101377AYA
Reference:
3101377
Name: regulatory protein, Isotype: SoxS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxS
Sequence:
1 MGMTRNLLAA GLAAVLALPA LAAELVMVEQ HGCEWCARWN EEIAPIYPKT AEGAFAPLRR
61 VDLRAIPADL ETARRVVFTP TFLIVEDGRE LARLEGYPGE DFFWPLLEQL LVDHAGFVPK
121 KPGSS
SEQDB ID: 3101377AYB
Reference:
3101377
Name: S oxidation V protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxV
Sequence:
1 MFEISYLGAL FAGLLSFFTP CVLPMVPFYL SYMGGLSMAE LRGDGRIAPG AQRRLIVSSV
61 AFAAGVTSVF MMLGMGATAL GRLFGTYLDT LSWAAAAILV VFGLHFLGVI RVPLLYREAR
121 MDSTMPASTL LGAYLMGLAF GFGWTPCVGP ALAAILMIAS GMGEIWRGGL LLLVYGIGMT
181 APFVVAAFFA RPFLGWVQRH RAAFAWVEKG MGAMLILFAI LIVTGGVNWI ADAMIRWVPG
241 FSALG
SEQDB ID: 3101377AYC
Reference:
3101377
Name: thioredoxin, Isotype: SoxW
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxW
Sequence:
1 MRRFLAILGL LALTSGAQAE LGDDGLHKTA WMRDTFKDLR EDLDEANAEG KRLVLFFEQR
61 GCVYCAKMHK EVFPRPEVSS YIEENYFVVQ LNLHGDIEVT DFDGEALSEK DMARKWGILF
121 TPTILFLPEE VAEDQSAQQA AVAMMPGAFG AGTTLDMFTW VAEKRYALDN GEDFQRYHAR
181 RIQERSNGST D
SEQDB ID: 3101377AYD
Reference:
3101377
Name: monoheme cytochrome c, Isotype: SoxX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxX
Sequence:
1 MGGHMKTTIL TLAAALISGA AWAGETAPGD VVYADGAVEA SLTGTPGDAA NGAMVVGSKK
61 HGNCVACHQV GALADVPFQG EIGPALDGAG SRWSEAELRG LVANAKLTFE GSMMPSFYRI
121 DGYIRPGDAY TGKAAKGALT PLLSAQEIED VVAFLATLKD E
SEQDB ID: 3101377AYE
Reference:
3101377
Name: S oxidation Y protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxY
Sequence:
1 MDFSRRDTLG LALGAAALTV LPFRVNAAAE DRIAEFTGGA EMGEGGLTLT APEIAENGNT
61 VPIEVSAPGA AAIMVLAMGN PTPGVAQFNF GPLAAAQAAS TRIRLAGTQD VVAIAKMADG
121 SFVKASSTVK VTIGGCGG
SEQDB ID: 3101377AYF
Reference:
3101377
Name: S oxidation Z protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxZ
Sequence:
1 MASGVKPRVK VPKSVAAGEA ITIKTLISHA MESGQRKDKE GNVIPRSIIN RFTCEFNGQS
61 VIDITMEPAI STNPYFQFDA TVPEAGEFVF TWYDDDGSVY NDNKSITIA
SEQDB ID: 3101377AYG
Reference:
3101377
Name: diheme cytochrome c, Isotype: SoxA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxA
Sequence:
1 MKVRAMTAIA ALLAAPLAAV AGPDSDELVV NGEINMVTQT EAPAHLDGAL SELYSGWRFR
61 SDETQALQMD DFDNPAMVFV DQAQEAWDTA DGTEGKSCAS CHGDAADSMA GVRAVYPKWN
121 EAAGEVRTLE AQVNDCRENR MGAKAWKYDG GDMASMTALI SVQSRGLPVN VAIDGPAQAT
181 WEMGKEIYYT RYGQLELSCA NCHEDNYGNM IRADHLSQGH INGFPTYRLK NAKLNTSHAR
241 FKGCVRDTRA ETFNPGSPEF VALELYVASR GNGLSVEGPS VRN
SEQDB ID: 3101377AYH
Reference:
3101377
Name: S oxidation B protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxB
Sequence:
1 MISRRDFLQV SMAASALVGA SGFGNWSRLA AQQALTQDQL LEFDTFGNLT LIHITDIHAQ
61 LMPIYFREPE VNLGIGAAKG QMPHITGADF RRFYGIEDGS PSAYALTYDD FSSLARTYGR
121 VGGMDRVANV VNAIRADRPD ALLLDGGDTW HGSYTCHHTE GQDVVNVMNA LKPDAMTFHW
181 EFTLGTDRVT ELVESLPFAS LGQNIFDAEW DEPAELFKPY KFFERGGVKV AVIGQAFPYM
241 PIANPGWMFP EFSFGIREEN MQAMVDEVRA EGAEVVVVLS HNGFDVDKKM AGRVTGIDVI
301 LSGHTHDALP EPVLVEQTYV IASGSNGKFV SRVDLDIRDG RMMGLKHKLI PIFSDVIAPD
361 PQVTALINAQ REPHIDQLRE VIGRTADDAL LYRRGNFNGT WDDLICDALI SERDADIAMS
421 PGVRWGPSIL PGQEITREDI WNVTSMSYGA AYRTEMTGEF LHVVLEDVGD NLFNPDPYYQ
481 QGGDMVRVGG LGYRIDVTKP QGSRISDMTL LKTGEQIDPA KNYVVAGWAS VNEGTEGPQI
541 WDVVENHIRK LGTVNVTPNT SVEVVGA
SEQDB ID: 3101377AYJ
Reference:
3101377
Name: S oxidation molybdopterin C protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxC
Sequence:
1 MSESSGKHSP SRRRFLTSVA AAGAGAVAAG AARAAGPDPL ITEVQDWARA TGDGVDATPY
61 GLPIEYEGDV IRRNVEWLTA DTISSINFTP IHALDGTITP QGCAFERHHS GAIALKKEDY
121 RLMINGLVDT PLVFSYADLE RFPRENHVYF CECAANSGME WAGAQLNGAQ FTHGMIHNME
181 YSGVSLRTLL EEAGLSAAGD LKDKWVYVEG ADASSNGRSI PMEKALDDVL VAFKANGEAL
241 RKEHGYPVRL VVPGWEGNMW VKWLRRIEVM DGPVESREET SKYTDTLEDG TSRKWTWVMD
301 AKSVVTSPSP QAPITHGAGP LVITGLAWSG RGAITGVDVS IDGGKSWQPA RLAAPGQDKA
361 LTRFYLDTNW DGSEMLLQSR ARDSSGYVQP TKAQLREVRG LNSIYHNNAI QTWWVKANGV
421 AENVEVS
SEQDB ID: 3101377AYK
Reference:
3101377
Name: diheme cytochrome c, Isotype: SoxD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxD
Sequence:
1 MSKFPKLTLT ASLAALMLSA PAWAGEFGLG RPALPEEIAA WDLDVSPDGT GLPAGSGSVE
61 DGEMVFADNC AICHGDFAEG VDNWPKLAGG MGTLDRDDPL KTVGSYWPHL STAWDYVNRS
121 MPFGNAQSLS PDEVYAIVAY ILYSNDLVDD DFVLSNENLA AFELPNAEGF IIDDRETAEA
181 HFWTAEPCME NCKDTVEITM RARVLDVTPD AGGAEEASAE AEEAPVTEAA AEPAPVAEAA
241 LDPALVAEGE KTFKKCKACH QVGEGAKNKT GPTLNGIVGH AAGAVDGFKY SKPMQAAGEG
301 GLVWTEAELA AFLAKPKAYM KGTKMSFAGL KKDEDIAAVI AYLKSFE
SEQDB ID: 3101377AYL
Reference:
3101377
Name: diheme cytochrome c, Isotype: SoxE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxE
Sequence:
1 MRWLGGAILA GAALTGVARA DETARDIGDA ARGEELFQVC ASCHQVGEGA EHGTGPHLNG
61 IFDRKVAQFE DFDYSPGILR ARRDGMVWDL EHLDAYLTNP KTLVSGTNMD FAGLPDPQDR
121 GDILAYLRRF SASPQNIPEA APTALKQDVE LAPEVLAMVG DPEYGEYLST ECTTCHQVDG
181 EYDGIPVITG WLAEDFVLAM HAYKLKIRPH PVMQMMAGRL SDEEIAALAA YFEALE
SEQDB ID: 3101377AYM
Reference:
3101377
Name: S oxidation F protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxF
Sequence:
1 MTLNRRTFLG TGVAAAATLQ APMVLGAGKP RVVVVGGGAG GATAARYIAK GADGAIDVTL
61 VEPTRSYYTC FFSNLYIGGF RELSSIAHSY GKLASEYGIN VVHDWAVGID RDARTVSLAG
121 GGVLPYDRLI LSPGIDFVDG AVEGWDLSAQ NKMPHAYKAG SQSELLKAQI EAMPEGGTFA
181 MVAPPNPYRC PPGPYERVSM VAHVLKQRNP TAKIIVADPK PKFSKMALFQ EGWNTHYSGM
241 VDWIGPDFGG ANVSVDPDAM TVTIDGEETK VDACNVIPAM KAGRICEIAG INEGNWAPVI
301 GHTMQSRMDE NIHVLGDATN QGDMPKSGFS ANSQAKVAAM AVRAALTGTK MFPAKFSNTC
361 WSLIGTDDGV KVGATYEATD EKIAKVDGFI SATGESAELR QATYEESIGW YAGITSDMFG
SEQDB ID: 3101377AYN
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTPFVSKA ASASVSLHYD GPPQDFRFLL LPKATMLAVA AAIEPLRIAN QLTKTQLYTW
61 HTMTENGAPV TCSNGLRITP DQALAPLPPE AMGFVCAGVE PEKSYSPAVL AWLRREYRHG
121 SALGGICTGA FALARAGLLE ERRFTLHWEN QPGFAEAFPN LTPTPNIYEL DGRITTCGGG
181 NTAIDMMLAL IEKQHGPKLA IVVADMCIHM RSGRQSPQRS ARSVAIGSRN PALIKAIELM
241 EAELEEPLTN DDLCDRLGIS RRQLERLFKR YLDQGPMAFY LNLRIERAFI FLNETNMTVA
301 EIAAATGFAN TSHLSRQFRA RYGASPHSFR KAWS
SEQDB ID: 3101377AYP
Reference:
3101377
Name: ATP-dependent clp protease, Isotype: ClpP, Subunit: proteolytic, Class: EC3.4.21.92
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: clpP
Sequence:
1 MFDPVDTYMN TLVPMVVEQT SRGERAYDIF SRLLKERIIF INGPIHDGMS HLIVAQLLHL
61 EAENPNKEIS IYINSPGGVV TSGLSIYDTM QYIKPKCSTL VIGQAASMGS VLLAGGEKGM
121 RFSLPNSRIM VHQPSGGYQG QASDIMIHAA ETQKLKDRLY DIYVKHTGQT KKAVEKALDR
181 DNFMSPEEAK EWGHIDEIVE SRSKGDDAE
SEQDB ID: 3101377AYQ
Reference:
3101377
Name: ATP-dependent clp protease, Isotype: ClpX, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: clpX
Sequence:
1 MTMATNSGGD SKNTLYCSFC GKSQHEVRKL IAGPTVFICD ECVELCMDII REETKSSSLK
61 SSDGVPTPRD ICDVLDDYVI GQSTAKRVLS VAVHNHYKRL NHAQKAGSDI ELAKSNILLI
121 GPTGCGKTLL AQTLARILDV PFTMADATTL TEAGYVGEDV ENIILKLLQA SEYNVERAQR
181 GIVYIDEVDK ITRKSENPSI TRDVSGEGVQ QALLKLMEGT VASVPPQGGR KHPQQEFLQV
241 DTTNILFICG GAFAGLDKII AQRGKGSAMG FGADVRASDE RGVGELFTEL EPEDLLKFGL
301 IPEFVGRLPV LATLEDLDED ALVTILTKPK NALVKQYQRL FELEDTELDF TDDALKAIAK
361 RAIERKTGAR GLRSIMEDIL LDTMFDLPSM DNVTKVVVNE EAVTSDAQPL LIYADAEKGS
421 ASAG
SEQDB ID: 3101377AYR
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIGRRGISA PFSVERGEGA LPPSLAVTPP EYFEQSEKAM CRHGNREGAG KMRIRRISSG
61 GPFEAKIGYC RAVVAGGFVH VAGTVGQGED VVAQCRSALE VIGAALKEAG AGFADVVRVT
121 YYLPDAAEFE PCWPILAETF GANPPAATMI ECGLIDPKYR IEIEVTALLP Q
SEQDB ID: 3101377AYT
Reference:
3101377
Name: NADH dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGILNTLLRA VTWWNGATLN TRIYTARKGT RVGEDAQGNI FYRNGDDSQR WVIFNGEAEA
61 SRIDPEWHGW LHRTWDEPPS ERPLPHKAWE KPHQENLTGT PLAYVPAGSL RRTKPVERRD
121 YEAWSPE
SEQDB ID: 3101377AYU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSHNMTEVL VGGAVLAAAL TFGIYASQAT GLSRGTGGYE LAASFRSLEG VTVGTDVRLA
61 GVKIGTVTGV DLNPESYRAD TRFTVSEGIQ IPDDSAAVIS SEGLLGGNFL EIMPGGSAFY
121 FEPGDVIDDT QGAVSLISLL VKFVAGDGSG E
SEQDB ID: 3101377AYV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRLVAVLLA LLPAPLVAGD AVTSGTGAML RGLDKVSGQT EDFRVATGGT AEIYGLDVAL
61 GDCRYPVENP TGDAFAYLTI WERGQRQAIF DGWMIASSPA LSALDHSRYD VWVIRCMTP
SEQDB ID: 3101377AYW
Reference:
3101377
Name: Leu/Phe-tRNA-protein transferase, Class: EC2.3.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aat
Sequence:
1 MSLPPEILLH GYSIGIFPMA EHRNDPDVFW VDPIRRGVFP LNGFHLSRSL ARRMRRGGYQ
61 VSIDRDFAGV LDGCADRAET WINPEIRASY LALHHLGHAH SLEVWQAGQL IGGVYGVVLG
121 AAFFGESMFS RRTDASKIAL AHLVDRLRQT GFALFDTQFL TAHLASLGAV EIPRAEYRRQ
181 LERALNGAAD FAAVIEQSPQ GVIQRITQTS
SEQDB ID: 3101377AYX
Reference:
3101377
Name: Ac-CoA carboxylase, Subunit: biotin carboxylase, Class: EC6.4.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: accC
Sequence:
1 MFDKILIANR GEIALRVIRA AREMGIATVA VHSTADSDAM HVRMADESVC IGPPPGNQSY
61 LSVPAIISAC EITGAQAIHP GYGFLSENAG FVQIVEDHGI TFIGPSAEHI RIMGDKITAK
121 DTAKELGIPV VPGSDGGVAD VAEARRVGEH IGYPVIIKAT AGGGGRGMKV ARNAKEMEHA
181 FSTARSEAKA AFGNDEVYIE KYLTTPRHIE IQVFGDGKGN AVHLGERDCS LQRRHQKVFE
241 EAPGPCITPE ERARIGKICA DAVARINYIG AGTVEFLYEN GEFYFIEMNT RLQVEHPVTE
301 GIFGVDLVRE QIRVAAGLPM SFTQDDLQIN GHAIEVRINA EKLPNFSPCP GKITAYHAPG
361 GLGVRMDSAL YTGYSIPPYY DSLIAKLIVQ GRDRPEALAR LQRALSELIV DGIDTTVPLF
421 HALLQEPDVQ SGTYNIHWLE RWLAENLAD
SEQDB ID: 3101377AYY
Reference:
3101377
Name: Ac-CoA carboxylase, Subunit: biotin carboxyl carrier protein, Class: EC6.4.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: accB
Sequence:
1 MTDSRHEADV AFIKALAELL RENDLTEVQV KREYGEEDSL NVRVSRVSPV AAAPVQVAVP
61 AAPVAAAPVA PAAPTAAPAS AEDPAAHPGA VPSPMVGTVY LQPEPGAPSF VSVGASVAEG
121 DTLLIVEAMK TMNHIHAPRA GTVKRILVGD GDAVEFGTPL VIIE
SEQDB ID: 3101377B
Reference:
3101377
Name: glucose-inhibited division protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gidB
Sequence:
1 MMVPDANTLN VSRETFERLK IFADLVHKWN PRINLVSKRS LEDLWTRHII DSIQVFRNAP
61 KGDLWVDLGS GGGFPGLICA ILAAEEKPET QFICVESDQR KSAFLRSAAR ECGIACQVIS
121 ERIEHLDPLD ADILSARALT DLTGLLGFAE RHLKIGGTAL FPKGAAWKKE LQDAAKQWNF
181 SYDAVTSLTE PQAVLLKITG VTRV
SEQDB ID: 3101377BA
Reference:
3101377
Name: phosphomethylpyrimidine kinase, Class: EC2.7.4.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thiD
Sequence:
1 MVPIALTIAG SDSGGGAGIQ ADLKAMSALG IYGASVITAV TAQNTCAVTA VHEIPTEIIR
61 AQIEAVLDDL DVRAIKIGML ATPEIIGAVA DAIAGFDGPV VLDPVMVAKS GDALLAAEAV
121 ASLKERLLPR ATLLTPNLPE AARLLSLRDA ADQDEMVSQA RALIALGAEA VLMKGGHAKG
181 AICHDLLVGR AGVLAEFSAP RRMTKNTHGT GCTLSSAIAA GLAKGRTLKA AVRDAHTYLQ
241 GAIVAADRLG VGKGHGPVHH FHRVWSA
SEQDB ID: 3101377BAA
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPGFEYAP IGLVELENRV IRRCNLHFAS MFGGQESEYR DMPLLRLYPS HEDFERIGKR
61 GLQVMRETGY YTDERIMRRR DGDLFWCRAR GKSLTPDDPF RHGIWSFADI SEERRVVELT
121 PREREVALLT CRGLSAKEVG VELGLSYRTI EAHRARLLQK FGARKLPELV AKLSGMPL
SEQDB ID: 3101377BAB
Reference:
3101377
Name: thiolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVSIAGWGHT KFGKLTDMSV EDMITAAGRD ALADAGLGAE AVDGIWVGHF NAGLVGDGFP
61 ASLAMSIDPA LRFKPATRLE NACASGSAAV FAARQAILSG EARVALVIGV EKMTHLPTAE
121 VAAALGHAAY QKEEAGLSFP GVFAQFAQAY FERYGDHSRA LARIAAKNHG NSVNNPLAQL
181 QKPLDEAFCA EVSDRNPIIA APLKKTDCSL VSDGAAALVL VADDMLGDVT KAARLRGVAQ
241 VNDIMPMSQR DLLAFEGPRR AIHRAYDRAG VTVSDIDVAE VHDCFTIAEL LIYEAMGLAA
301 HGHAADLLEG GVVHEGGRLP VNLSGGLKAK GHPVGATGVS MHALIARQVL GQADAMQHPG
361 AELGLVFNMG GSGVANYASI LEPVKA
SEQDB ID: 3101377BAC
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNIGLWLARQ AQAGGERPAL FLGRDLVADY AAFHDRAARV AGWLGSQGVA PGDRVALFMG
61 NSPDYLILQY GIWYAGAAAV PINAKLHGRE AAFILADSET TITFAAPDLA AALHAAQAPG
121 RIVETGTAGL AAILAADPVA APAQCDPGDL AWLFYTSGTT GRPKGVMITH RMLMAVSLAY
181 PVDVDPVTPE DTVLYAAPMS HGAGLYNMVH VLRGARHVCP ASGGFEPGEI FGLARHFTRV
241 QMFAAPTMVK RMTDQARASG ETGEGLRTVV YAGGPMYLAD IVEAVEHFGP IFVQIYGQGE
301 CPMGITALSR HDVTDRSHPR WQERLASVGR AQSPVELRIG DGDGAPLPPG QTGEVMVRGD
361 VVMPGYWRNP QASARALRDG WLMTGDMGFL DAEGYLTLQD RSKDLIISGG SNIYPREVEE
421 VLLTHPLVRE ASVVGRPHPD WGEEVVAFVV GEATAAELDA LCTRNIARFK RPKHYRWLPE
481 LPKNNYGKVL KTELRRILEG EG
SEQDB ID: 3101377BAD
Reference:
3101377
Name: 3-hydroxybutyrate dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLSGKTAL VTGSVQGIGL AIAKVLAGGG ARIAVHGLAD AGEAEAACAA MRAAGASEAR
61 FFAGDLRDPG QIAMLMREVA HWGGADILVN NAGIQRTAPL SQMAGENWET ILSINLSAAF
121 YTMQAAMPAM AERGYGRVIN IASVHGLVGS VEKAPYVAAK HGLIGLSKVA ALEYAALGDR
181 GRGGVTVNCI CPGWTETAIL EPQIAARMAA LGVDRVAAMA DLMAEKQPSR RASDPAEIGA
241 LALWLCAPTA HNVTGAAIPV DGGWTAQ
SEQDB ID: 3101377BAE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRATVFRHGK RPGKDLFLAG NFQFPALVRQ ARPCLNERMK ICAITMVYRD HWALGQWYRH
61 FARQLGAEHL YVVAHGADPE IARICPGASI LTIPRADLSR FDTRRGDMLN AFQNGLNQIY
121 DWVIRTDADE LICLDPARFD SFADFFARQR RSAVFALGLN LGERAEDATL QGDEPVLNHR
181 QSAVFTGNYS KAWAVRNRIG LKSHGVQLRP ARVEGFPFVM PRGAYLVHLK YANSAALARS
241 ADHRREVAEQ PGLGNPGQAW LNPGTDSRRF FKQFEALPEL PWEEAEPRAY ADISTEPVRE
301 PGPGVVRARR DTPRLRTRLP DWFSAL
SEQDB ID: 3101377BAF
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNVKPDFSKN ANQATTAPAF LSVWDMHAYY GESYIVQGVN FNVHEGEILA LLGRNGAGKT
61 STLRSIARTG SPLVTHGEIW LDHQPLHNMA SYEAAQAGLG LVPEDRRIIP GLTVEENLQL
121 AQIAPPVGWS LERLYDLFPR LGERRKQEGV TLSGGEQQML AIARALARDI KVLLLDEPYE
181 GLAPVIVDEI EKTLIHIKEQ GMTTIIVEQN AVRALELADR AVILDTGTIV FDGSAAEVLG
241 NAELRAEYLA I
SEQDB ID: 3101377BAG
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGILEVKNVG KRFGGLQALS DVNLSVAENT VHAIIGPNGA GKSTLLNCLV GKLIPDSGSV
61 MFDGQSVLGR APYEINQMGI SRVFQTPEIF GDLTVLENMM IPCFARRDGA FELNALPSVG
121 SQKDVVEQAM HMLEEMRMAD KRHMHAASMS RGDKRRLEIG MCLSQQPRLL LLDEPTAGMA
181 RADTNNTIDL LKQIKEERDI TIAIIEHDMH VVFSLAERIT VLAQGTPLVE DTPENIKGHP
241 KVREAYLGES A
SEQDB ID: 3101377BAH
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGLDKKDTS LLIIVAILTL LAPFILNPFP TGSAMAQFNA GYPDLMQRFV IFGIFAIGFN
61 ILFGLTGYLS FGHAAFLGVG SYSAVWMFKL LSYNVIPAIA LSVVVAALFA LLIGYVSLRR
121 SGIYFSILTL AFAQMSFALA YSVLSNPKFN LTNGETGLQV YADDPQIFHR DGLPDMPHLF
181 GLSMRSTYKL DLGAWSFDFN AGYYLCAVIM MVMFYLAIRI FRSPFGMMLR AVKSNQQRMN
241 YTGLNPRPYT LAAFVISGMY AGLAGGLMAA MDPLAGAERM QWTASGEVVL MTILGGAGTL
301 IGPVLGAGFI KYFENIFSKI NDTILHQWFS FLPDGIEDFM VFIVHPFIGK GWHLTLGILF
361 MLVVIFLPGG LVEGGQRLGN WLRNRGKRTS EAKTKHEPAE
SEQDB ID: 3101377BAJ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTMDAILLQ ILNGLDKGSA YALIALGLTL IFGTLGVVNF AHGALFMIGA FCAVMLQRIL
61 NLSFQTIDET QKDFLGNPLK VDTPYVHSWF GPETGAAIID WSVPLAVIFA IPIMLFIGYA
121 MERGLIKHFY KRPHADQILV TFGLAIVLQE IIKYFFGANP IQTPEPSALK GSLDIGLMLG
181 FDPNAIIYPI WRLVYFAFAA VIIGGVFAFL QFTTFGMVVR AGMADRETVG LLGINIDKRF
241 TIMFGIAAGV AGLAGVMYGP LNPPNYHMGM DFLVLSFVVV VVGGMGSLPG AVAAGFLLGV
301 LESFASTTWA TTTIPGINQI IIYLVAIIIL LTRPRGLLGR KGVMED
SEQDB ID: 3101377BAK
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKNQVTRRG VLKTGAVAGA GVALPTIFTA SSAAAYTNEP TGGTVTLGFN VPQTGPYADE
61 GNDELLAQQL AVEHLNGMGD GGCLNTFTSK ALKGNGILGK KVQFVTGDTQ TKSDAARASA
121 KSMIEKDGAI MINGGSSSGV AVAVQGLCQD AGVIFMAGLT HANDTTGKDR KANGFRHFFN
181 AYMSGAALAP VLAKEMGSDR RAYHLTADYN WGWTQEESIV ASTEALGWET VNTVKTPLAS
241 TDFSSYIAPV LNSGADVLVL NHYGGNMVNS LTNAIQFGLL DKVANGKDFK IVVPLYSELM
301 AAGAGDNIKG VLGSMNYNWQ LDNEGSRAFV KSFGEKYGKP PSNSAQTCYA QVLLYADACE
361 RAGTFNPCGV VEALEGFEFD GLGNGKTLYR ADDHQCFKDV LVVRGAQNPT NAYDTLEIVE
421 VTPVAQVMYP PNHPMFGGDE ATLGQCNPGA
SEQDB ID: 3101377BAL
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARDTLTGSR IRERRLMIGL RQADLAREVD ISASYLNLIE HNRRRIGGKL LVDIAAALSV
61 EPSMLTEGAE AALLATLREA AADASPTGAE ADRIDEFAGR FPGWAELLAR LFRRVGSLER
121 TVETLSDRLT HDPHLAASLH EVLSTAAAIR STAAILAEPG ELEAEWRDRF HRNLHQDAER
181 LAESSKSLVG WLDDSQAIED RTGVPVEQVE AFVAGHGNHF PELEAGGDIE SVPLDDLASG
241 AAREIARVIL GDYAADARAM PLPEMEAALD ALGLDPVALA RRFDVGLPAM FRRLASLPEG
301 VLPYEVGLVI CDASGSILFR KPITGFALPR HGESCPLWPL YTALGRPLTP IRRRVSQLGR
361 NAVEFDCLAV AWPEEMLDFD SDPVIRSVML ILPVPATERG RQPAQPVGAS CRVCPRGDCP
421 ARREPSILSE GF
SEQDB ID: 3101377BAM
Reference:
3101377
Name: response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRRVLLIED EPNIAEAIRF LLSRDGWQVE THADGADAVD IITTALPDLV ILDVMLPGKS
61 GMDILRELRE QAATQDLPVL MLTARGQSRD RDMAEKAGVS RFMTKPFSNT EVLTAVRDLH
121 AQASRP
SEQDB ID: 3101377BAN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGPAGEEAG RGPLQPPPVF LERQSYRRRR LMDAARLLPL MGAALFAVPL LWPTDEAGTV
61 RMSAAITYVF GVWAVLIAVS ALFGRATRQG GDRQIAQEPE R
SEQDB ID: 3101377BAP
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSLNVLVAV CMAYVILLFG VAFAADRLSS TGRTTWLRSP LVYTLSLSIY CTAWTFYGAV
61 GYAARSGLEF VTIYLGPTLV MIGWWWGLRK LVRVGRSQRV TSIADLISSR YGKSNTLAVC
121 VTLLAVIGVT PYIALQLQSI TLSFDIFAEA DPVSRPGEGS SAFWVACGLA VFAILFGTRN
181 LDANERHHGV VTAVAIEAVV KLVALLAVGV FVVWGIAGGL GDTLARIDAS EIGVWQVDHG
241 RWATITFLAA AAFVCLPRMF QVMVVENDDE RHLRTAAWAF PLYLMLMSLF VVPIAVVGLE
301 LMPEGANPDL FVLTIPLAEG QETLAMLSFL GGFSSATSMV IVAAMALSTM VSNHIVMPIW
361 LNAQGSGASV SGDVRSVVLY ARRVSIAVIL ALGYFYYRLS GGGAALASIG LIAFAGIAQI
421 LPALVGGLFW RGATRTGALV GLTVGFVLWL YTLLLPGMGA GVIAPQVMEH GLFGLSWLRP
481 QALFGIAGMD PMVHSVMWSL SLNTAAFCIA SLLSFPSPLE RLQGAQFVNV FDHSAGPRGW
541 TGSVAQSEDL MIMSQRIMGA REAQEFFQSE AMAQGSRAYL PEPTPAFLER LERELSGSVG
601 AATAHAMIGQ IVGGSSVSVE DLLAVADESA QLLEYSSRLE AKSAELSRTA RKLREANEKL
661 TQISLQKDAF LSQISHELRT PMTSIRAFSE ILRDTDGLAP VDKTRYAAII HDEALRLTRL
721 LDDLLDLSVL ENGQVTLNMG QGRLVDVLDR AMATALTGTD RPLRVRRHRG AERIVLRTDL
781 DRLSQVFINL ITNAQKYCDA ADPELSVTVH DVGGRIVVDL IDNGSGIPRD ARKMVFEKFA
841 RVGAEKAGGA GLGLAICREI MQRLGGDISY LSGQEGGAFR VSLPVGMEIA AQ
SEQDB ID: 3101377BAQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMATDAENKT VLERKLALAR DERQGDTRSI LRALRLALAR AADEAVGLAM SVIGATQARR
61 ELDELGRAVA EDRLYLMLSG PEGALGAACM DRACVTAILQ QQTMGQVVAG GFVERAFTGT
121 DAAMVAPLID ALLPRARDMV DQPLDRVCLT GYEFCARAES RRALLLLLEY DRYRVFDLTA
181 EIAGGKAQGQ ITLILPDRPE AALEGAEGAA APQGLHLDAA FGVVRADLDA VISRIRLPLA
241 AFAGMQPGDL LPLVGLKLDR TEIVTIEGRQ VALARLGQCR GMRAVRLNEK LPDPERIEQG
301 PDGFLAHKPG EGQRPETPPD PDVIDHEARP PARPRHRAED YEDVDTEAEG DLDALSEYDL
361 PALSTDQVAT EIAELAGLPR EEETAESN
SEQDB ID: 3101377BAR
Reference:
3101377
Name: ORF TIGR01244
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIRPITPRY AVSPQISVED ITAIAAAGFT RIICNRPDAE VPPSHQAAAI GEAARAAGLE
61 FEVLELTHQT MTPENVALQG TLAESASGPV LAYCASGTRC SVVWALGQCG VLGADDVLNK
121 TAAAGYQLEA LRPRLEEIAQ ARG
SEQDB ID: 3101377BAT
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLLISLIAG ALFGGGLFVS GMTDTRKVQG WLDVFGDWDP TLAFVMGGAI LPMLLAWRLT
61 EGRKPLAGGS FPALPRPEMD HRLITGSVLF GMGWGLAGLC PGPAIASLSY GGVGGLIFLV
121 AMLAGMAVAP RVGTQLDRLA ATA
SEQDB ID: 3101377BAU
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 METDWIWGLV GGLLIGTGGA VYLLGNGRIM GASGILGGLI DGTGRSNWVE RAVFLFGVVV
61 APLLLWPLYS VEIDTHVTSD IWVIVAAGLL VGVGTRIANG CTSGHGVCGI SRFSLRGIVA
121 TVFYILAGGL TLAIFRHVLG VI
SEQDB ID: 3101377BAV
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHHIHDSPYD LGNQQEPVMT PFVKAFFDEA TFTVSYVVRE PDGRACAIVD SVLDFDHASG
61 RTNTASADAI VNYVTAEGLN VEWILESHVH ADHLSAAPYL QERLGGKIGI GANITVVQDT
121 FGKVFNEGTE FQRDGSQFDA LFREGDSFHI GQMRGDVLHT PGHTPACLTY VIGDAAFVGD
181 TLFMPDFGTA RCDFPGGSSA TLYQSIQKIL ALPDDTRIFV GHDYKAPGRD EYAWETTVGE
241 QKALNVHIGQ GRSIEEFVQM RDARDATLGM PRLILPSLQV NMRAGQMPPA DEQGNVYLKL
301 PVNKL
SEQDB ID: 3101377BAW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWALQGCARI RQPLRKQADR AFGLGMGPIV REISYACYLP VAKSVLTMGR GHMTAQDLYR
61 AAERLERRVE GASLNTRLEL QPEFSKIMDR MRQQGLKVPA RLRQLDAALC EDAVEAQFDN
121 MPV
SEQDB ID: 3101377BAX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLFDIIIWAG AALSLLGLAG LVWCILRVNR ARKAGLSDDD LRAAVQAVLP WNLGALFLSV
61 IGLMMVMVGI SLG
SEQDB ID: 3101377BAY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQPQSDANY GIAAGELRQF IERIERLEQE KKDIADQQKE VMAEAKARGY DTKVMRKIVA
61 LRKRDKDDIA EEEAVLEMYK AALGMA
SEQDB ID: 3101377BB
Reference:
3101377
Name: thiamine biosynthesis oxidoreductase, Isotype: ThiO
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLWSVIGAG VAGLTVATEM VARGARVQVF DPGGPPGPHG CSWWAGGMLA PWCEYENAEE
61 PVLRLGQQAI GWWEQHTTVT RRGTLVVANP RDLPDLRRFG RRTEGFREIN QTEILGLESD
121 LGAFSKGLHF PDEAHLDPRR ALSDLYRGLL DKDVDFHRKP APAGLENAID CRGLHAREVL
181 HDLRGVKGEM LVIRAPDVAL TRPVRLLHPR MPLYVVPRAD HVYMLGATMI ESEDSGRITA
241 RSMLELLSAA YALNPAFGEA EVLEIGVDLR PAFPDNLPRI RRLGRTIYAN GLYRHGYLLA
301 PALAQGVADL ALNNTHTELV DEDRA
SEQDB ID: 3101377BBA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQVVFHTGAH GTDDDRLIRC LLSNKEPFSQ RGIAVPGPAQ YRALFKKVLT ALDEAEPEPQ
61 AREVLIETIL DGEVADRVIF SDANFFGSHW SALGKGMFYP RAAPRMANLQ SIFAYDQVEM
121 FMAIRNPASF VPDILGALPE KGAAEAMDGI DLNKLHWTGL VESIRAAAPN VQLTLWCNED
181 TPLIWAQIIR DMAGLEHGNK IVGGFSLLSE IMSKEGMVRF RAYLAEHPEL SEMQKRRVIA
241 AFLDKYALED AVEEELDLPG WTHELVDQLT ERYDEDVFSL QRIPGVQFIA P
SEQDB ID: 3101377BBB
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQIKFIDTK VGAIPTPDKT VWYTDPEQKG LRLCVTKTGV KTWYVNKWDP TANKVRSVKL
61 AQWASKVTHC KWAKDQRGLV AHGIVSGDVL NKAETQAKAA VEQANALPTF REALEQFIEH
121 RTTSRQSGKA RMMETTAKDY RSTFNKHLAH WADVHVDRLP ILEINQYLNA VQITRPNAAH
181 VAATVAGATV RFINKLCALA LPIPSLLEGT KMRSRVETGK LDMHVPWANR WDEIEAIQNE
241 HIRLCWKITW YTGFRGRGLR ALTWDQVDLD AGVVTFDRLK RQEVERTIVL ADDVFWLFKR
301 LHEIRHDDCD WVFPSRVVRR DTRGHLDVLD KLPLTKPGDL RHFWMTVARE VAPRHVHRWL
361 AQQTMTDNDL RMLGHYGEPT YEEQKAAANS IAAAISKRIQ AAPSSVVELR RNTA
SEQDB ID: 3101377BBC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNCAIPSRR CGRMARGESV MAGNRIRRQN TTDEFERLEP GVAQDLLAFN ITKQRIVDLC
61 NKEFDEDPLE GAKNYSSFHR ALDGHEVYSG IVHALTNLRD DQATNPAKYL PKEGPGEDLA
121 EWMAQFAKAT WWYNLLDLEM TQSTLNAWFS GRGKRERPDV REQVEAWWAK LSEAVELVMR
181 RNRAEARSRH HDSEVKRDEW DKPRREAMSW DTWCKDQLED GLSMEEVREH FIGEALIYKT
241 SLFDVDIIDL ANPQNPLEAE SPTDLERNLC EYMWSELVER DFACAVSRHP TEFDPTPFFE
301 EDRWGDRRNE ECPKDINSEL YKLNYRTKVT RFWDAEQRCV STEREIVAVS KDGIDWQEPT
361 ERQKQGWSSG FDYWLAAMDA GESTDSQYKQ ALDAASLRVR QIDRKLSLEM DDAERRSLKV
421 QLEEAQDWEN HCHNDY
SEQDB ID: 3101377BBD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRMPFDLPQ TMTPTERARQ LYADGHSIQT VFMALAFVTT KSEREQIIRA LVQ
SEQDB ID: 3101377BBE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKIKHRTYQ EQRQAYDKIR DVIAGEDRLK NAGARYLPEP EGMTTAQYTR YVQGASFYAV
61 AERTLRGMVG AVTRNAPVLE LPERIAGMRD AATFEGHSLD VLLESALREV LSLGRFAMLL
121 DYPTDGAAPG SAPFISTFDA ESILDWKEEL VGGRQKLTYL RLHETNHDLE DTGVEQHLVL
181 TLDPAYTVKR YHVKSQRNGP DIQSVEEVQV GEDITPTIDG SPMFDIPAVI VSPYNLKADV
241 EKPPFLDLVN VNLAHWRVSA DYYWSLYLTS QPTPWVAGSI NEKNKPRQIG SGAFWVLPQG
301 AQAGMLEFTG AGIAAQKTAL DDLTAQMATL GARMVYDGKG RNETTDTARL RHRSELSLLH
361 SSVNMVEAGL TKLLRLAAEW TRPGTADDVV FKLHRDFVTA QMDPAILTAL LKAYTAGAIS
421 HDTFLMNLKK GELMDVNRAL DDERDLIDED DNVLPMPGVA
SEQDB ID: 3101377BBF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMLTDPDFGQ HNSRTPPEEL LIFAVLSRAI LDLFGPVALA SNKAEGKKSR YEALRFLTDH
61 SGAWAKRRTE LCDAIGFNGD DVRARVIRVL EGDTRALDVY EGRGSLNQVE KARELWECEK
121 QARADAQTRR KVKPKRQGVR YMEARPKVMA LLDRPRTVKE LSDETGFSDG VVRTVLNKAI
181 EKGTVEKQGA AYRVPDTPVA ATAA
SEQDB ID: 3101377BBG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGMTRPNHEE PEMADENDKQ AEALIAALAP KIAEAILPQI TESVETQIKG VVTKNDELLD
61 KLAKQKADDN HSKLLAAAES QYQARLDGNG LYQGRKPGDS IKIKKSDARS VSKYREAKAL
121 AEKEGVPLEI VAND
SEQDB ID: 3101377BBH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKKVTLVPG KGPVATVHKK RGPPKGTPVK AKQPYKMELL PDAKREHYTR EIVLGRMSMF
61 QAGKELGISD TSVARYITQL PEDEKLAILA TAMHDAKVKT AMQHAAIVNE FGEDTDKDLK
121 WVLRELKSLL ESAKGDEDRM MQLGALKELR QSLMSLADLH GKLNKKMDIH LNLNESPQFI
181 QLRSIILKVL NNHPAAKHEF LNEMDAMGVI QEPVLVDDRR PA
SEQDB ID: 3101377BBJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMDPHLLSFL QGLTVSLDPV ERFRLAIGEP DPWQKTLLST DPRLNEADRM VLALCGRQSG
61 KSTSAGGLGY DDFSQARR
SEQDB ID: 3101377BBK
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPRRRCSDG LLPYEARDRA HLLAVHAEPA NRIFLRDVDR RQTGAPHHGA LHRHPPTRGA
61 SRLRQSHHVR HHVPARTPVR VCRFWNAPPV LGHARKFEQP ERQRIGAVMT QPKYEFLKDG
121 RVVLPSNADP AAYGTVVHGW LKHHVGMDLG RNDPSAIVVV RDTCYPQFTG RGFEQELGPR
181 KCTVVFQETI QLYSYTDLAD FLAKRLNQIP HWSLAIDASG LGAPFSSTLD NAGIEHHAVV
241 MTAGANMSRS GKDVKIAKTM LLENMAVGLE TGALTVAHDL EGKQDLLNEI ASFELASTSS
301 GNLVLQGGGK GHHADRAIAT ALAYLSATHL DTTLSGSYRL SGWA
SEQDB ID: 3101377BBL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHEGASHAG KNSYDLCMQS VAHHLQVEAV KLVPASTVDA DSYARSAFNR YYYATFLCVR
61 SALVSIDRKY ESSLNHKGVP DLLRGVIQKR IKAIQKKADK LGDQLLVKDC RQANSRNLKF
121 ANTLEKAYAI RVVADYTPET AVDFRSSRFS LSGVAVTEAH DWLGEATLWA SLLLDVIRQE
181 NA
SEQDB ID: 3101377BBM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSLEKVTKY LVDSGLKLSG PIARRDGENS DLYAFVEVTR DEKGHQKPSN LRLSRLTKEL
61 LDDGIVVKFI LNDVSNADFE TGLRATLLHA FPEFIRNCFL SFDNDGAVVW IVPKISAVRE
121 HLGSIANRIT IYLGNADITL SEVKLTVDEN LPSRTAILSE LRISAPTTSE HLAERLSEKG
181 FSTPPIDYIN RHLDALRRAN HVIRRKDAHY CLTASALKVL GTVKRRSSPD IARFLDLARR
241 GT
SEQDB ID: 3101377BBN
Reference:
3101377
Name: RNA-dependent DNA polymerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPHQLTGS RFFSFSDEGE FLKSVSAVVD EEEFVRIGSL VQAGLMPITS KEVLATMLGV
61 NPGIIWSLEN KPERYYRRFK IPKGKGEREI VAPKVGLKVI QKWFSVQLQD CARIDDHVFG
121 FVPGRSHIDA ASVHTNANWV YSIDLTNFFP STPINWVASS LINIGYDADS ADRISKLCCY
181 RGALAQGSPA SPVLSNISMR GIDAALGALA AEMDVRVTRY ADDITFSAAG EFPQVLPERL
241 ESLFSQTPWK ISQEKTYFSE APVRLKVHGL VVNGNTVKLT KGYRNKLRAY RHVLQTNRCR
301 QEDLARLSGH VRYASQVSSR DD
SEQDB ID: 3101377BBP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEERFHIAE WYGNPFHRLG DWDRVRLAQH KVGGATMSKA EIDRLVVLED KAVTEALTSR
61 ESDRLSVLRD KLTRQQAEEI PCPFRPDTPN ATCTKPGGVC SIRVYRGEKN RVEPITGERG
121 RLRALCPWRF HQDGKAFSEV GKRLLNDPDP IKAGEVGFLE SSGNLDSDPG EDVGRIDMIL
181 VKSNGVEGAP MDWVAVEVQA VYFSGKKMSI EFDHLIKTQG KISMAREKRR PDYRSSGVKR
241 LMPQLQTKVP TLRRWGKKMA VVVDAPFFYS MGEMARERDV SNADIIWFLA DFKEDLNGGG
301 FKLEIVEEFY TTLESATLGL TGGTPVSQGD FEARIRAKTD G
SEQDB ID: 3101377BBQ
Reference:
3101377
Name: DNA methylase, Isotype: C-5 cytosine-specific family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHTAIDLFC GAGGLSAGLE MAGFTVLAGN DIFDAAGKTF EATHPRAKFI PGPIEDLTIE
61 HLLEVTGLKP GELTVLAGGP PCQAYSVYNH QRGMHDERAT LFKEYLRIVD GLRPEWIVME
121 NVTGIYSIGG GEAVAAIKSE LAALGYEVEE AVLRAEEYGV PQERRRVVFI GNRVGVPISH
181 PEPTHGPGRS MPFVTIKDAI GDLPALENGE AKPDAAYLDG KPTSYQRQMR GNATVITNHA
241 APRLGQVNMD RLPHIPPGGS WRDIPFDLLP AGMKRAKRSD HTKRYGRMTW DGLSCTVLTK
301 CDIHWGAYIH PEQDRAISVR EAARLQAFPD WFEFHGSRTD QYVQVGNAVP PVLGKAIGDH
361 LMGLIKARSS KAA
SEQDB ID: 3101377BBR
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSAVVGLEN DDDDYDRREV VAESLRGVPD KALTVVALMD PERPAPVHTL QDARNIYLKE
61 RLGDDEDGRK RVDRVFKRVE EALGDLTKLP LSGLKREHAR KVRDHMLQSE KKGGGTLSPA
121 TVERELNLVT AVVSLALREF DLAGEVANPF EKLPVGSAGN EALKNESDKR DPLPADVIKA
181 MRERLSSGAV RLPEIGLIWR LLEGTGCRMS EVTGLLVDDV DVTSDLPHIR IQWNEDRRLK
241 TQVSIRSVPL VGDALDAAKE ALELSREGRA LFPRYSGKRG GDGASQILMK HLRTITTNPR
301 HTNHSLRHKM KERLVTADVS ELVQNFLLGH TLRGEGNTAY GGERAKLVVT TKALKKALGL
361 PE
SEQDB ID: 3101377BBT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNGWITASG EQEVCTSNIA TPEKIAEITA RQSRPDTTVS REVHMPFNGG PARVTEQHNG
61 EYQAYQDRSF KGSIIETAAA EGGHMIVNRA VRGSDQVTLP GGMTSIAADL GFLVRNPNGS
121 YSDAPRKTDL KDPTAGALPG KPDASSVKGE ASGSDSDDTF SLSEEGEAAM KTIVESCFQG
181 DAIRGMDEIL NHGEVSPNTI GKLASAANME PHEMAEIVNK AHQGFYDAVA QRIEASGIDG
241 DAFEAFLKSD LQRLGKFTHA ARQLVLGNID EGFEIIDEAK ERFLWQADRF MQDDVKAALD
301 EAGYGWESDG KGRLIVVTND FGKIPFEVAV HQGIIRFI
SEQDB ID: 3101377BBU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIIETLPTR SQKKRSRFTS ELRRQLVHAF GGPRFAPLDE KYKTAGSKRQ DRNVPVWWRS
61 IRIRNEVQIT CDLIAEDYEA KTGVRLPPAE IIAAAMSITL PELVERLAED AEDEVAAAEQ
121 QQRLHDGLVK SGWRS
SEQDB ID: 3101377BBV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLAEFRSQD MSPQKPMLHM VCGKIASGKS TLSAELACAP NTILVSEDAW LDALYGEQIQ
61 DGADYLRYSA RLRTIMALHV TALLDAGLTV VLDFAANTLA QRRWMADIVR ASGAAHQLHY
121 LDVADDTCLN RLRARNAEGS HAFAATEEQF RRFTAHFVPP TEDEGFTLVR HDGQAR
SEQDB ID: 3101377BBW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPLVFVLTQ FAILAYAVLG GVFLAFSDFI MRALALTSAT GGIEAMQVIN REVFRWVFMT
61 LFLGMAAISA FIMVHSALYL AGGPGTLILV GALVYLFGCF AITVIFNVPM NQALADMDLS
121 AEATRDFWTG TYLPRWTMWN TIRMLACILA ATMMLFGLVW FTQSQTRLA
SEQDB ID: 3101377BBX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQMALTVLEK TALWASGLTA VGIGACILTA PHAFFASYAI ILGDDPSLLS ELRAPAAGLA
61 AFGVLILAGL WRAALTPLSK AAAMTIFLAF PAGRIIGVIV DGLPSAPIIG ALLFELAIAA
121 LCVLAFGRGA TPIRAKHPIG RPKH
SEQDB ID: 3101377BBY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTRPILVVG ATGKTGSRVA AKLEAKGAAV RRGSRHAEIP FDWESPATWA PALSGVSRAY
61 VTYFPDLAFP GAVEKLEAFT KVAAASGLDQ IVLLSGRGEH HARLGEKVVE TSGIPFTIVR
121 AAWFAQNFSE GYLRDPVVAG VLPMPGGDIA EPIIDIDDIA DVVVAALSED GHAGQLYEVT
181 GPRLMTFAEM AKVLSTATGR PIRHLPISFE DFHANVAAAG GEFVADVFTA IARETLDGRN
241 AYVSDGVERA LGRKPRDFAA FAAAAASQGL WTAAA
SEQDB ID: 3101377BC
Reference:
3101377
Name: thiamine biosynthesis protein, Isotype: ThiS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thiS
Sequence:
1 MKIVLNGEPR EVEAETLAAL LAECGLSGRV ATAVNESFVP SSLRGAHRLN DGDRVEVLAP
61 MQGG
SEQDB ID: 3101377BCA
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYVTSLFAR KMVAAAGAGI DQRATLEGAG LNPDAPWDPK VMIPATTYYE MLEDMAEQTD
61 VTELPIHVGA SMRCDEYGAL GLAWKAAPTL GASCARIARY ARIWTGVVTY ELREHPQGTL
121 FILHREGERR LGLRLSNEAT LASAVALARQ VCPVPFSPLA VFVQHKAPES KAFHEAWFEC
181 PVTFGADLDA ILISREAMER ANILGDEGIS RYLMSDLDGE LARVQMPPAV VGQAKDAIAQ
241 SLNAGTPRMA DIARGLGLSA RSFHRRLSEH GMSFQALTEE TRRELAEGLL RDEQYSLAEV
301 AYLTGFSEQS SFTRAFKRWL GTTPASYRKA LS
SEQDB ID: 3101377BCB
Reference:
3101377
Name: acyltransferase, Isotype: HtrB-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSASLKSFI HHARYFPLWS ALTLSQWRSF DERSRSLGAT FAAVMRWFPP ARNRFDREAR
61 RVFPEMTRGA RAKLGQSMGR HMGRTLFELY HDAEFQTQHQ KFRISGPGLE ALKTAHAAGK
121 GAIIVSGHFG QWEAIRAALK MHDMESGAII RTHKNPHYAR RIRAGIEAGG TPILSTGRAG
181 TMALVRHLRS GGIISILLDE KYPEGVRLPF LGVDALTSLS AAQLALKYDV PMIPAYGIRI
241 EDGDAVQVIF EAPIARTDSV TMTRAFNDSL SARILANPDQ WYWLLRRWEG A
SEQDB ID: 3101377BCC
Reference:
3101377
Name: Ser/Thr protein kinase, Class: EC2.7.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALNTLVDTS IEADQQDDLQ PGTTLLHGQY TITCFLNNGG FGITYLAKDS LDRTVVIKEC
61 FADAFCRRTK TLVSARSRAH QGELKSIIRH FIREAQSLSK LKHPNIVGVH QVFEDNDTAY
121 MAIDFVDGRD LQDILDDPNA TLTPEQIVNM TRKLLSAIGY VHKENLLHRD ISPDNILLTK
181 DGEPVLIDFG AAREETSADG RKHSALRVVK DGYSPQEFYI AGSDQGPWSD LYALAASLYH
241 VIRGEAPVNG QARLVAIAEQ RPDPYAPLAG DVKGYPEGFL EAIDKAMNTK PSTRLQSAED
301 WLAMLDGNQT APVAPEAVNN NTAPATEQKQ RSRLPAVSLL AVVAGLGVAG FVFYGNNKAE
361 KGAELAAPVA AQPVKSAQTE PVAGGSSEAP TAAKPTSEIA VAIAPPPEPA AKDAPVAEVT
421 SQAAAPEIAA VPAETAVVAE PAQTAAPAAD TAAPAATESA AADAPGVDAE QAAADSDKII
481 AAAAAPTETA PAVEAPEVKA APAPGHEVTY ALWDVSIPFE YEEKIVRKAQ VVSITGIGTE
541 TDLAKTGAWI APGVEIITVN NRPLSTDSRF ATQLLNAMQI DPDGYTRVSI RYKDAENKRF
601 EMGLLAVPVL RRTGMTGGLQ FEAGMQDGAW VTVVSQVAAE GAAQFQVSDI LLRETTTGSR
661 LTTADGLSEI MQSLKERDAA TASFDILRDG QPASVELKLA GHD
SEQDB ID: 3101377BCD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKTTILMGA SLLAIAAAAQ TAQAQQACEI YQVAPGDNLL KLTQKVYGHI DFNVIYSANA
61 AVIGHNPNII KTGSKLLLPC ADGSLPGTTA AEEKAPAVTT QAVVVNDTAE AADAAAVAQA
121 LAAAEASVEA QTALETQAAL EAQALRDAEA AAQAEAAAQA EAAAQAEAAA QAEAAAQAEA
181 AAQAKVTAEA EIAPEAPVAV TPLVPADPEP MVLITGNDFP PFTGENLPGR GLFTQLIETA
241 ALRADPDTEV SVTFVNDWES HLETLLPAMA FEGSFPWLKP DCEEYQLLSG GDRFRCDTYR
301 FSDPFFEVVD GFFATSGSPF VATFDYDDLK GSRICRPEGY SMAHLDTAGL TSETVNFYRP
361 VQVAECFTAL AAGAVDVVAL DTLVASDTLA TMGLAGQILE NPNLGEVKTL HAIVHKDHPR
421 AEETLGLLNS GLKEMSASGE WYAIISKALQ REIRPLTN
SEQDB ID: 3101377BCE
Reference:
3101377
Name: LysM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMLKPLVHK CATTLAAALC LATSAEAQEA CSSYTVQHGD SLGSIAQSAY GSFDYQMIFN
61 ANRNALGSNP NAVEPGTVLQ IPCADGSIAG MERAQAVIKR EEAKQEERDI PEVYNPPIKF
121 LGGNDWKPFM DETLKGGGMM VRLSSTALKR GDNDRDHIMS YIDDWGAHLT TLLTNGAFDV
181 AIGWTPPPDC TKRDLLDEAA LYRCDELVFS LPIYETVTSY WSRTDSKYAD VKTWSDYAGA
241 VICRPEGWST FDLTLEGLVD PVVTWKFMPN ASDCIKAAVD GDVDMVSLDL ESALGAIEEV
301 PGSADVLQPN SNLSKVEPLN WVMHKNNPRA AQYIELLNAG LTEMRESGEW YAIISDSIAE
361 YNQFGS
SEQDB ID: 3101377BCF
Reference:
3101377
Name: LysM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMKFSKTKTL ILAGVAIAAL PGIAAAQVAC APYTVKDGDS LGSIAQAAYG SFDYQMIFNA
61 NRNTISNPNS LEAGTVLQIP CEDGRLTANS DVTEIIAQQE EKQSKRAKSS IYEPPIKMVS
121 GNGWEPFTGE SLKGGGMLVR LATTALNRGG NDRDYNLSFV DDWKSHFDTL LPLGAFDVSI
181 AWYKPNDCSD LENTDSDTKY RCTQLNFSLP IYESVSAHWT TVDNPYANIR DYADYAGAKI
241 CRPEGWSLAE LSGQGLVEPV ITVLHPTTAV ECIRMLMTGE ADMALLDLEG GDAAVSEVPE
301 AEGKVQLNSN LSELQAIHFV THKTNPRGRV YLTLLNKGLN EMRESGEWYA IIADSLAEFN
361 KIGS
SEQDB ID: 3101377BCG
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGFFGKLIGR QDQLAEPDRM GRLRDSDEAA QQDLLKAVAQ QTRTVELDLG PFATERTPPA
61 SAAVPAQAAP EAAAGIWDLD SAAGSPAAAP SGGAGLQIPQ PGGEMPDLTA HVSAAPARKR
121 RAKTRLLGFD TSDGQVVDLF NAPDTAAAQA RDARFPVGWI VVADGPGYGE SFTLKAGMSA
181 IGRGEDQAVA LDFGDTAISR SNHAAIVFDP ETAQFFLGHG GKSNIVRLNG QPVISNESLK
241 SGDMIRLGET TLRFVALCGS EFSWSANGGQ EAEHVEIA
SEQDB ID: 3101377BCH
Reference:
3101377
Name: Ser/Thr protein phosphatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWKSPEPRFD VAAAICQGAR DYQEDAIITD FPSGTDIGMA VLADGMGGHA AGDVASKMVV
61 TEAFSKLKFE SVNFAEYETQ IPYHLTHAAA EANSCVHEYV QDNPSVRGMG ATLVSLVVIE
121 DRLYWLSIGD SPVYLLRGGK LKQLNEDHSM APQIDMMVKA GLLDAEAAQN HPDRNCLTSV
181 ILGENVVRTD CPKTPFKLEV GDLVVVSSDG LQFLEDARIE KILQKYRRRK SAEIVERLLA
241 ALDELADPDQ DNISFAVIKL NHNKPATRKM RRKPVDLVSD NSASATRVVA MNSATYPQPA
301 EGEPDQGGEV VKLAAKGR
SEQDB ID: 3101377BCJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQSETAQTG EAVRRALADG HIPAHLQAAA GALLQKLDQP VGVTLFGLPG SGKSSVVNLL
61 LGREVIPAGI SFPTLKISGG PDAASSGVLA DGSPFRLSGF DPVALASKAA VYIEARLPLP
121 ALNQISVTEI VAPDAAALER AVPWAADRTG ISLWCTQEFG AAEQAAWSRA SEQMKDSAFL
181 LVTKADDLAA QGRLQPVLAA LQDGAAEQFN QLLPLATLEA QAARHPDGAV DRDRLRRSGG
241 QALISVIMHE VKLQRQAALD QADSLLRKYR PATPKADPAP AVSVLPEAEA VHEQAAMPAV
301 AAAPAPNDVQ ARPAMPATIP PEQPEAVTAA DTPVPPPTAV PGAAADPALG PEIRQAYDQA
361 LDYLSGQAQS LSQTLQTKTA RDHAPLIRQT LQSVQWLSEH LDECGNGSDG ALAQMRGAVS
421 EAEDLLHLIQ VEEDETSLFD ATSILLQLKR DMQAQLAA
SEQDB ID: 3101377BCK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHDDAIADN LAALAARQTV FRDGKRVISN GFFPPPLPAI LQEIATTVLP RQVTFQAGDS
61 HLSLVVSERR LMALTSASSD LAEVQPLIGT GLSHDQPDVL EAVASALVRL SQMEQPVLVD
121 TGFSGPSEGQ SGLGVPLGML KDLIALDQAE QERPMAFFID ASADLYVACL LHTDGTWMEA
181 AEDETVLASL QQVADVQWER FQASFAKHAA PLAAPRLISL GAVLEDGLCV SVVWADGEYA
241 LFAHSQADLV GLHEMWRRVF TL
SEQDB ID: 3101377BCL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTCGPAGTGL SSRASEMTVL EALDRLHTQF PACGTLAYAD LAAGMVLVAN SQCALDRHAL
61 DALCAEAGCL LGEASSPPLG SNAPDIALAQ QAGRLLLALR APEQPSDALL CLADPELDLG
121 GFRSAARDCL TAISAEA
SEQDB ID: 3101377BCM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTPEGGARK PRIGIMGEFS AGKSTLSNLL LGQRILPEQV TATRLPPVWI VQGDKPAQRA
61 ALDGSLHPMS LVDLEEISLE ETLYVKIGID APVLDECDLI DFPGISDPNM PSEVWERMLA
121 EVDSVLWCTH ATQAWRQSEA AAWGMVPEAV RQRSLLLITR FDKLTTPLDK LRVQTRVARE
181 TEGLFAGVCP ISLTEALAAA PDSPEWEASG AETFADALEA VVRAAACGGL PEAMPAQTQL
241 TAPAAPEPAE PSTSAPQPAP GRVMPRRVRP KGETRTPRPS ARPQAADQDL SALRREMQET
SEQDB ID: 3101377BCN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDETQESQRA GIRALPFLHL GHGSLSRLAG DFEELKDLLL DIHALEGKGR RSQVARQLKE
61 LEDFKPSVTM LGQIKSGKTS LVNAMVARPG LLPADVNPWT SVVTSLHLNA PRREEDPVAS
121 FQFFNGDEWD HLVANGGRIG ELSMRAGADE ELQKIQAQVA EMREKTRKRL GRRFELLLGQ
181 KHDYRHLDDE LMQRYVCLGD DFEMAGSSDQ QGRFADITKS ADLFLSLPSL PVPLCLRDTP
241 GVNDTFLMRE QITIKSLRNS RLCVVVLSAS QALSSVDMGL IRMISNVRSE GIVIFVNRID
301 ELPDPINQIP DIRDSILATL QKMNGPENPR IVFGSALWAN AALAPQTHPL NESSAASLRS
361 YAGAVLQEAV QNPEIDAALM WQLSGVPDLF QTIGERIADG VGARLLSEVR QRAANQVSSM
421 QAACTVASMR IEGNQISVIE PAALNQMLRR LESVSMAQMD TALDQVFATF SARVDQAHNK
481 FLERAVASLL QHLESYGENE TWQYAPDGLR ILLRSSYQVM RKNLLAACTQ VYCDAASAIH
541 DTYEQTVSIQ VSGFRIAPAA APEVPPPVAI GATIALDLQT SWWKGWWQRR RGYRAYASSF
601 YDLIKAETAP IIHELKEQQT AEIRQDARER LMDFFSEQRA LLMEVAEKTR LSVGDLNNLF
661 GIAAQQEQAE LLGLLLKELT SSDAGQTDAP AKSTREGAAA
SEQDB ID: 3101377BCP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGANTADAII VGSGLAGLVA AAELGDRGKR VILLDQEPES FLGGQAFWSL GGLFMVDTPE
61 QRRMGIRDCA DLALRDWLGS AQFDRAEDAW PRKWAEAYVE FAAGEMRPWL HGMGLRWFPV
121 VGWAERGGSY ANGHGNSVPR FHITWGTGPG VLAHFLRRVQ DHVAAGRIEM RFRHQVSHII
181 MQNGAATGVS GEVLAEDSAQ RGQRTNRDEI GEFEVYAPSI LVTSGGIGGN FDLVRKAWPR
241 DRLGAPPPNM VAGVPFHVDG RMIAISERAG GHVINGDRMW HYTEGVRNWD PIWPEHGIRI
301 LPGPSSMWFD ARGNRLAPPC LPGFDTLTTL REILKTGHDY SWFVLTQKVI KKEFALSGSE
361 QNPDFTSGKW SEVIRQRILS GKSATAPVEA FKEHGEDFVV AHSLSELVRG MNQLGEVAID
421 EDHLRAQIEA RDAQMDNPFT KDAQVMAIHA ARNYRGDRLI RTAKPHKFLD PANGPLIAVR
481 LHVLTRKTLG GLHTNLDGQM LGSDGQVVPG LFAAGEVAGF GGGGYHGYNA LEGTFLGGCL
541 FSGRNAGRSR AIA
SEQDB ID: 3101377BCQ
Reference:
3101377
Name: Gln amidotransferase, Isotype: class-I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRFLILQLR PETDAADAEF ASILDKCGIG PERAHRIRLD CEDLPEGLDV TDYAGVIVGG
61 GPGCVSDDPA TKPATEARIE AAILGLMPQI TGADHPFMGC CYGLGVLAAH LGGAVSKARY
121 GEPVGPSTCT LTESGATDPL TAGLPPVFEA YVGHKEAVQA LPPGCTHLVA SDPCPFQMIR
181 WGENVYATQF HPEADAQDFE QRIQIYKDHG YFPPEDAARL IELCHSAEVT APGEILRRFA
241 ERYG
SEQDB ID: 3101377BCR
Reference:
3101377
Name: ORF TIGR01033
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGHSKWANI QHRKGRQDAA RSKLFSKFSK EITVAAKMGD PDPDKNPRLR LAIKEAKSQS
61 MPKDNIERAI KKAIGGDGDA YEEIRYEGYG PNGVAVIVEA MTDNRNRTAS NVRSTFTKHG
121 GNLGETGSVG FMFERKGEVV YPASVGDADT VMMAAIEAGA EDVESSEEGH VIWCADTDLN
181 EVSTALEAEL GESDSTKLVW KPSTTTELDL EAMQKLMKLV DALEDDDDVQ RVTTNFEASD
241 EVMAAL
SEQDB ID: 3101377BCT
Reference:
3101377
Name: Bordetella uptake gene family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLRKTIAAI AAAAGLFVAG IAHAEWAPKG NLTLQIGFGA GGSTDTIGRV VAKVMKEQTG
61 WNVIAENKPG GGGVAMFAGI ANRPADGSVV GLGVNMPILV NLVNKPGDLG FDLDSFDYLG
121 TAARAQLGLF ARADAPFDDV AGLIEYAKAN GAAPLAFDAK PQELAMRQVM AKSGAEFQFL
181 STKGGAENLK LVLGGQAIAG FEAGEHLPFL ESGEIKMIAS MNNTRHNYAP DIPTLPEQGY
241 DIYVDPVFFF AAGKGTPEDA RMAITEALAA ALDSEEVKTV VMNSLKSPIE NMGPEGTEKM
301 LRDGLVNVGA LFGK
SEQDB ID: 3101377BCU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMQAKTSDRL LGLCLILLAV AFFVSIIPWQ AQAADYGWLK PRTLPRILAV VLGLCGLALL
61 IRPPGDVRPG RFYWARAMLF AGVLVLGLAA MSWLGFVLVA PPMALVLMWL AHERRPLWLV
121 LGAAGMPAAI WFTVAVLLDR PLP
SEQDB ID: 3101377BCV
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPELSVILAG FGDALAPINL LFILFGVALG QFVGAVPGIG PVMATAIAIP FTFGMDPLTG
61 IAFLVGVNKG GLVGGAIPAV LLNTPGTPDA AATALDGYPL AKQGKPLKAT KMALFSSITG
121 DTFSDIVLIT VSAPMAILAL RMGPVEVLGL MLLAFAVIAG LMGQSLVKGV VAIALGLMAA
181 MVGTDPEHGS PRLIFGNYEL YDGLPLASVA IGMLAISELL KRLSETRGTV RPAITLPRNQ
241 PRADRSVSWA EYWGCRFTML RGAVIGTILG ALPGIGSTAA AFMSYASARQ ASKEPESFGK
301 GSLHGIAASE SANSSVMGAN MIPMLTLGIP GSVSAALIIS AFMIHGIQPG PFLFSQQGQL
361 VYGLFGAMII ANLINLWVGQ LGLRFWVRVV SAPEPFIFAS ALLMCFVGVA LASGGLFGIG
421 VMLVFALLAY VMSAFGISVV VFIIAFFLGP RLEISLSQTL ALLNGQPQKL LDYPFALVLM
481 ALALVTAVAL ARRRDTESET R
SEQDB ID: 3101377BCW
Reference:
3101377
Name: trkA-C domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLDQILLFS LFAAVFALLL WGRFRYDLVA FSALLTGVVL GLVPVKDAFS GFGHPATIVV
61 ALVLVVSAGL VRSGAVFLIT RTLVDASRGL GAHIALMGGI GAVLSAFMNN VAALALLMPV
121 DIQTARKAGR AAALTLMPLS FATILGGMVT LIGTPPNIII ASIRAEALGE PYRMFDFAPV
181 GGAAALAGLI FVALIGWRLI PTRGGGAAEA AEALAEYIAE LTVPEGSPHI TKRLAELDAE
241 AEKADVAILG LIRDGQRRYG RAANTILAAG DTLVIEATPE ALDEFRAALS LDFSDKERQQ
301 ALTAAGEGLD VIEVVVTDGA RIAGRTAQGL GLSWRQNTVL MGISRQGTRI TQHIRRTEVQ
361 PGDILLLLCP RDRGPDVTEW LGCLPLATRG LSVTANDKTW LAIGLFGAAV LAASVGLLYL
421 PVALGLVVVA YVLTGILPIA ELYDHIEWPV VVLLGSMIPL GAALEASGGT QLIAGGLVTL
481 TEGWPAWAIL TVLMVVTMTL SDVLNNTATT IVAAPVGIQM ANALGVSPDP FLMAVAVAAS
541 AAFLTPIGHK NNTLILGPGG YHFGDYWRMG LPLELLIVAV TIPAILLFWP M
SEQDB ID: 3101377BCX
Reference:
3101377
Name: nitroreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFARDALSYA ALPLPDRVEM SDDQMLAAAE AFHDTMRRRH TVRDYSDRPV PRAVIEACIR
61 TAGTAPSGAN HQPWQFVAVA DPALKARIRE EAEEEERRFY AGGAGDEWIK ALEPIGTNAV
121 KEHLTVAPWL IVVFAQRWGQ FDDGTRYKNY YVPESVNIAT GFLLAALHHA GLCALTHTPN
181 PMRFLNDALG RPASEKPTMI IAVGHPTEEA TVPEVAKIKK PLDQIASFAE
SEQDB ID: 3101377BCY
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFDPQQLAA LAAILRLGSF EAAAGALSVT PSAVSQRIRA LEEKVGLALI QRGPPATGTA
61 AGLRLARHAE DVGLLEAQVS RDLALDQGAG PVRVRIAVNA DSLATWFLEA MTGVEDVLFD
121 LVIDDQDHSA DWLRRGEVAA AITAHGKPVP GCDAHPLGAL RYIATASPGF MQDWFAEGVT
181 ATALARAPCL TFSPKDRLQK AWIAAHVAEA LTPPTHFLPS THAFVDAALA GVGWGMNPES
241 LIRQHVAQGN LHPLLPQAPL DVPLTWQVSR VLTPALAPLT RAVRRAASRG LIAG
SEQDB ID: 3101377BD
Reference:
3101377
Name: thiazole biosynthesis protein, Isotype: ThiG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thiG
Sequence:
1 MRAFYGTELP NPLMLGTAQY PSPAILEQAF RASGAGVATV SLRRESGAGQ TFWSMIRDLG
61 VLILPNTAGC HTVKEAVTTA HMAREVFGTP WIKLELIGHT DSLQPDVFGL IEAARILTED
121 GFQVFPYTTD DLIVGERLLA AGCEVLMPWG APIGSGRGLN NEYALRAMRA EFPDTPLVVD
181 AGIGLPSHAA RALELGYDAV LLNTAVARAG DPVEMARAMA LAIQAGQLAH RADPIEARDM
241 ASASTPVIGK AFLS
SEQDB ID: 3101377BDA
Reference:
3101377
Name: Lys exporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSAIVAGFA LGFGLILAIG AQNAFVLRQG LRRQHVFAVC LTCALSDAVL IAAGVAGFGG
61 LARAVPWFEP LMRYGGAAFL IWYGARSLFA ALTKTEALTT GEDARPGGGA ALRPVLLTVL
121 AFTWLNPHVY LDTVVLIGSI SAQYPDRLGF GLGAVLSSFT FFFSLGYGAR LMAPVFARPR
181 AWQVLDTVIA LTMWTIAAKL LLM
SEQDB ID: 3101377BDB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFNPDMPLPQ TADSRPLAGI LWMLAAGLCF VVMTAMVKSM GQGMHPIQSA FLRYLLGIVF
61 VLPALRSLLA ARLTRRHWTM FGLRGAIHAV GVMLWFFAMT RIPLAEVTAM NYLTPIYVSL
121 GAALFLGETL AARRITAIFV ALIGAAIILR PGFREISPGH LAMLGTTLTL GGSYLLAKAA
181 VADLSPAVVV AHLSIWVTVA MIPFAVAVWQ TPSWQQLAVL FAIASFATAG HYFMTLALQA
241 APVAVTQPVT FLQLIWATLL GALVFGEGVD IWVVAGGTLI LASVSFITWR EAVLKRRPIT
301 PPSIAPKL
SEQDB ID: 3101377BDC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPASRIGSGA KTGGRMTRAI AILCLLLAPG TAQAELEICN DTPVVQSVAL AYRGGEDWNS
61 QGWYVFEPDQ CQTVLEGDLS NRYYYVTALA EGWVFDHQDI AFCVKQGVFD IVGAENCRDR
121 GLITNLFREV DTGPRATGFR LDLSPITRIG ED
SEQDB ID: 3101377BDD
Reference:
3101377
Name: HTH-type transcriptional regulator, Isotype: BetI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: betI
Sequence:
1 MGMPKIGMEP IRRDAIVKAT IAELGVQKSL DVTVSQIAKR AGMSSALAHH YFGGKDQIFL
61 AAMRHILSEF GDEARAEMKG STPADRPQAI VRACFAHSCF TPDVIAAWMT FYVLSQTNDD
121 ALRLWRIYQS RLYSNLVHAL RPVVRNPGEV ANDLRALIDG LYIQAALGAP GEPDLACAHA
181 LRVLDTLIEA GR
SEQDB ID: 3101377BDE
Reference:
3101377
Name: choline sulfatase, Class: EC3.1.6.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: betC-1
Sequence:
1 MTRPNILILM VDQLNGTLFP DGPADWLHAP NLKRLAARST RFANAYTASP LCAPGRASFM
61 SGQLPSRTGV YDNAAEFRSD IPTYAHHLRR AGYYTCLSGK MHFVGPDQLH GFEERLTTDI
121 YPADFGWTPD YRKPGERIDW WYHNMGSVTG AGVAEITNQM EYDDEVAYHA KAKLYDLARG
181 KDDRPWCVTV SFTHPHDPYV ARRKYWDLYE DCEHLLPQVG DLGYDNHDPH AKRIFDANDW
241 RNFDITEEDI RKSRRAYFAN ISYLDDKLGE ILEVLETTRQ EAIILFVSDH GDMLGERGLW
301 FKMNFYEGSA RVPLMVAAPG MEPGRIDTPV STIDVTPTLG ELAGVDMAEI APWTDGTSLV
361 SLANGTERTA PVLMEYAAEA SYAPLVSMRY GKWKYNRCAL DPDQLFDLDA DPHEMTNLAD
421 HPDHQGTVQS LRAKSQARWD LDRFDAEVRA SQARRWVVYE ALRQGGYYPW DYQPLQKASE
481 RYMRNHMNLD NLEESQRFPR GE
SEQDB ID: 3101377BDF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTSEHIAAL TALVETYVMA MTRGDRPALE RIFFGKASEV GHYEGELLWN SRDAFIAMCE
61 DAADAETDPF WAISSVSVQG DIAMLHVEND WAGMRFDDFL TVLLHEGSWR IVSKVYRIR
SEQDB ID: 3101377BDG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRDKLTERF RTLHVPGNPL VMPNPWDIGS AKVMARLGAQ ALATTSSGYG FTLGLADGGQ
61 ISRDIALQHA ADICAAVDLP VNGDFENGFG DSPDTVAETV RLAAEAGLAG VSIEDTMMPS
121 KEFYPFDLAL ARIEAAVAAA RAAGIVLTAR ADGCMTGNYD QAEALRRCIA FARAGADVIY
181 APLVDADTTR ALVATGTPVN LLAAGEMRDL TTEQMGALGV ARISIGGGLA RVTQQILLDG
241 TRAMLERGDF TLLKGAANVA EVEALLNG
SEQDB ID: 3101377BDH
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRKRIRDIR NDELVAAAIR SLHQRGFGSV TMAEIAGEAG ASAASINYYF GSKDRLMEET
61 MRRLLSILHA ALLSRLAKAK TPRDRLLAIV EANFDDTLFT PAQCSVWVQF WANAPYTNSL
121 SRLHRINRAR VASNLRHELR ALLPDPARSW VQTSIQAYMD GIWIEAAQAD SVPDAAQARA
181 DACALTEMLL ERG
SEQDB ID: 3101377BDJ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILNSILSIG LLLTFGLVAF CVIKWRDVEC IGPTPVHLFT FIAILFTSGL DVGLIMFPLA
61 EFGGYAEDPA YAFANPLAIE FGFWGFLIWA FYFLTAFYFC VIEPRVGFFE IPLVKLVNNI
121 VIIGTCAFTA SLFLIYLPGY IPEIGDGETV VPAFYVIVFL TILAAAYSST DLKYVRVLSV
181 GSTFLFLALI LGMWAAAGMG LGGVGQNLGL LGAYFGNLHE FVLPLTDYHA FYLFWWFAWS
241 IMIGQFTSRF VGGLKTWQLL IALLVFPSIP LAIWFSVLYF YHENGISTAG LTNVAMIVVG
301 ITFVINSLDS LIRLYTDNLS ITVERLGRPV YIAGNVGVLF ALTLLFQSQW LQIQWVGSIV
361 IGLYLACVLF IALRHRSTVM AIRTSPEDRA LDFHKVESVH
SEQDB ID: 3101377BDK
Reference:
3101377
Name: choline dehydrogenase, Class: EC1.1.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: betA
Sequence:
1 MEADFVIVGA GSAGCAMAYR LSGAGASVLV IEHGGTDAGP FIQMPAALSY PMNMSRYDWG
61 YLSEPEPHLN NRRLVCPRGK VIGGSSSING MVYVRGHAMD FDTWSEMGAD GWAYADVLPY
121 FKRMETWHDG GHGGDASWRG TDGPLHVTRG PRTNPLFKAF VDAGKQAGYE VTGDYNGEKQ
181 EGFGPMEQTV WKGRRWSAAN AYLKPALKRE NCDILRGLAA RVVMDAGRAT GVEIIRGGKA
241 EVIRARREVI IAASSINSPK LLMLSGIGPA AHLAEHGIAV VADRPGVGAN LQDHLELYIQ
301 QAAIQPVTLY KYWNLLGKAA IGAQWLFTKT GLGASNQFES AAFIRSQPGV PYPDIQYHFL
361 PIAVRYDGQA AAEGHGFQAH VGPMRSPSRG AVTLRSDRPE DAPVIRFNYM SHEKDWADFR
421 TCIRLTREIF GQDAFKPYAG KEIQPGAAVQ SDEELNAFIA EHAESAYHPC GSCRMGRASD
481 RNAVVDGQGR VIGVEGLRVA DSSIFPQITN GNLNAPSIMV GEKMSDHILG RDPLPRANDI
541 PWINPRWEAS QR
SEQDB ID: 3101377BDL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHTPHELAE EFPEKVDLMS QLKQSDAHFS KLADEYHEIN RAVHRAETNV EPMEELAEVE
61 LRKKRAALKD EIWGILSKV
SEQDB ID: 3101377BDM
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATQKLYAGA KLREIRNRLS LTQKDFAAKL GVSLPYLNQM ENNNRPVSTS VVLALAQEFG
61 LDVTELSTGD SERLVSDMRE ALADPIFADA MPPLADLRLT ASNAPALARA FIELHRTYRQ
121 THERLASLDE ALGREDARIQ ASPWEEVRDF FHYCDNYIDA VDHAAERFAA RAQTDGVRGA
181 ALAALADRGI TVELADIEAL RQYDPATRLL RLSTRSAPQT QVFQLLLQVA LLSQNSLLEA
241 TLDFARFHSE EARAIAKIGL ANYFAGAALM PYGIFLEAAQ QTRHDLERLS TRFGASIEQV
301 AHRLSTLQRP GAKGIPFFFV RVDQAGTITK RHSATRLQFA RFGGACPLWN VHRAFETPGH
361 FLRQLAETPD GVRYISLARD VSKTGGSFGA PVRRYAIGLG CEVRHADQLV YADNLDVSNA
421 SAYEPIGISC RICERKTCHQ RSVPPLERRL TIDSDHRGTL PYEVN
SEQDB ID: 3101377BDN
Reference:
3101377
Name: YCII-related domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLFCVTFQDN PGKEHLRQRH MAEHLAFLAT QGAAIRGAGP LFEGAQGRGG MWLIEAGTRA
61 DVQALVEQDP FWPTGLRKEV TILEWRQVFC DGQPL
SEQDB ID: 3101377BDP
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNWDDMRYLL AVAQAGSLKG AARSLGVDKT TVSRRLRAME AALGRPLVEP RGPGLGLTDF
61 GQVLHRHAEV MRDEMRAVDA RIMADHAAPL GTVRLTSVPL IINHVLLPAL SDLRAAAPGL
121 RVELIAESRD LSLLRGEADI ALRLARPTEG GQGVLARKLG DLDYAAYGAR GAAGPMPWIG
181 YEPRMGYLSH AAAIARAAEA EGGFAVAVND AESLFQMVCA GHGRTLLPRA IADADARLVE
241 VPFPHVALPR REVWLMVRRD LRELDRVRLA MEWVERAFAA RMSQAQSTRP PDHRENGDNP
SEQDB ID: 3101377BDQ
Reference:
3101377
Name: drug resistance transporter, Isotype: bcr/CflA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSPPAPSHR SPPALATLIL LSGLSALGMN IFLPSLPNMT EYFQTDYRLM QLSVALYLAV
61 NAAMQVVIGP LADKAGRRPV ILWGLVLFLF VTLGCIYAPT VEVFLFFRMC QAVIAVAIVL
121 SRAAVRDMYQ QDEAASMLGW VTMGMAVVPM IGPALGGVLD QYFGWQANFW ILFVLGVAAL
181 ILTYVDFGET ALKSGKTLIQ QFREYPALLT SPRFWGYSLA SGLSSGAFFA YLGGAPFVST
241 EVFGMEPARM GLFFGAPALG YFAGNFVSGA FSVRVGVDRM VLWGCLMNAL GVTLSLVTLL
301 AGFGSEYSFF GFMTLVGLGN GMAIPNATAG ALSVRPHLAG SASGLNGAIM LGGGAALSAW
361 AGALLSPETG AMPLLLLMLA TALLGVVAIF SVIWRARRLG L
SEQDB ID: 3101377BDR
Reference:
3101377
Name: propionyl-CoA carboxylase, Subunit: beta, Class: EC6.4.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pccB
Sequence:
1 MKDILSELET RREAARLGGG QKRIDAQHAR GKLTARERIE LLLDEDSFEE FDMFVSHRCT
61 DFGMEKQRPA GDGVVTGWGT INGRMVYVFS QDFTVFGGSL SETHAQKICK IMDMAVQNGA
121 PVIGINDSGG ARIQEGVASL AGYAEVFQRN IMASGVVPQI SVIMGPCAGG AVYSPAMTDF
181 IFMVKDTSYM FVTGPDVVKT VTNEVVTAEE LGGASTHTRK SSVADGAFEN DVEALAEVRR
241 LVDFLPLNNR EKPPVRPFFD EPGRIEASLD TLVPENANTP YDMKELINKI ADEGDFYEIQ
301 EDFAKNIITG FIRLEGQTVG VVANQPMILA GCLDIDSSRK AARFVRFCDC FEIPILTLVD
361 VPGFLPGTSQ EYGGVIKHGA KLLFAYGEAT VPKVTVITRK AYGGAYDVMA SKHLRGDFNY
421 AWPTAEIAVM GAKGATEIIH RADLGDADKI AAHTKDYEGR FANPFVAAER GFIDEVIQPR
481 STRKRVSRAF ASLRGKSLKN PWKKHDNIPL
SEQDB ID: 3101377BDT
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MACRTWHITR ADGKLQLSRR LPASFDVAAE TVLPAADPLR LAHQIRQDMW RKLQSLCGFS
61 PVVEITAEGQ GLRVRAGAHV IRAVPGMESP GAWHSHDLDF QMVYVTKGWV VFEYEGQGEH
121 LLRAGSCVLQ PPGIKHRECR HSDDMELIEI ISPAAFETRD ETAP
SEQDB ID: 3101377BDU
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKCIKFVAM VAFVGAVAAC DNSPKEEFVI VEPISTEPVF TGKYK
SEQDB ID: 3101377BDV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKHRGFPSR MPGSDFQFTI RRANPKGVTP LTRRERYRDR KAVDRRADAL FMQALWEQFG
61 DQPFERGNLD AGRLSWLFGR EVVAAEDPFD PASYEALLVI DVAVARASFP DAFDGDDWE
SEQDB ID: 3101377BDW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRRLDAISA LALMAALGAA STATAGDAGS QAELDALRAR VEALEAGRAA GANGDLNIGR
61 TAIDIYGYAK ADFFYDFDFV QGDTAFVNNI GEPANATDGT FGATVRQSRL GIRTSTETDI
121 GTLGGQLEFD LFASGGRSEL RLRHANIRIG DHWLIGQTWT NFMPIGHYPT SVEFNGPVGV
181 TFARVPQVRY THAFGKAVFS ASIEENSARS DDPVVTAALE YNDDLFSARI AGLVGTVISG
241 GTEVDQTGVT VSGALRPWHG GLFQATFVTG EALGPLLIGG GASAVGGVAN DVDGFTVEFR
301 QDVGEKWNFG IAYGNEEYDL GTSTGTLDFT ELESIHVNAF YKPTDNLTLG AEYIFGERTT
361 STGASFEGDR VQLAVQLNF
SEQDB ID: 3101377BDX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSLTSNRPS FYPRPARVDR RISPKLRGPP LRLSRRVRAA
SEQDB ID: 3101377BDY
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQKSKLFAGL ALVASLAACG DNPTEQALYG GSAGLLGSLV LDGNPVVGAA AGAAGNMLYC
61 KVQGTCN
SEQDB ID: 3101377BE
Reference:
3101377
Name: thiamine phosphate pyrophosphorylase, Class: EC2.5.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thiE
Sequence:
1 MTLDRFYPIF DHTDWLRRML PLGVKLVQLR IKDQSDPVIR AEIDTARDLC RAHGAVLVIN
61 DYWQAAIDAG CDWLHLGQED LDQADLPAIR KAGLRLGVST HDDDELERVL GMDPDYVALG
121 PVYPTILKQM KWHQQGLPRV TEWKARVGSI PLVGIGGMSV ERAPGVLGAG ADIVSVVTDI
181 TLNADPEARV HQWIEVTR
SEQDB ID: 3101377BEA
Reference:
3101377
Name: propionyl-CoA carboxylase, Subunit: alpha, Class: EC6.4.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pccA
Sequence:
1 MFNKILIANR GEIACRVIKT ARKMGISTVA IYSDADKQAL HVQMADEAVH IGPPPANQSY
61 IVIDKVMAAI RATGAQAVHP GYGFLSENSK FAEALEAEGV IFVGPPKGAI EAMGDKITSK
121 KIAQEANVST VPGYMGLIED ADEAVKISNQ IGYPVMIKAS AGGGGKGMRI AWNDQEAREG
181 FQSSKNEAAN SFGDDRIFIE KFVTQPRHIE IQVLCDSHGN GIYLGERECS IQRRNQKVVE
241 EAPSPFLDEA TRRAMGEQAV ALAKAVGYAS AGTVEFIVDG QKNFYFLEMN TRLQVEHPVT
301 ELITGVDLVE QMIRVAAGEP LSITQGDVKL TGWAIENRLY AEDPYRGFLP SIGRLTRYRP
361 PAETAAGPLL VNGKWQGDAP SGEAAVRNDT GVYEGGEISM YYDPMIAKLC TWAPTRAAAI
421 EAMRIALDSF EVEGIGHNLP FLSAVMDHPK FISGDMTTAF IAEEYPEGFE GVNLPETDLR
481 RVAAAAAAMH RVAEIRRTRV SGRMDNHERR VGTEWVVTLQ GADFPVTIAA DHDGSTVSFD
541 DGSSMRVTSD WTPGDQLANL MVDGAPLVLK VGKISGGFRI RTRGADLKVH VRTPRQAELA
601 RLMPEKLPPD TSKMLLCPMP GLIVKVDVEV GQEVQEGQAL CTIEAMKMEN ILRAEKKGVV
661 AKINASAGNS LAVDDVIMEF E
SEQDB ID: 3101377BEB
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFGARTYPRA SRPLAVLALI GLAACALDRE AEVRAQLGGW MPLGDTLYFE SKLECTAGVF
61 ATPADILQTK VRTVSTLRDG LAALSREAIV AFDLEGETPD QVSQAVMSAD LPKGLGILAS
121 GLSARACMDE ATKSAYLSAL HSPAALLIFA PDNNALVILD RDRRQVFFAR GDV
SEQDB ID: 3101377BEC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAGMYLHSH AQPLTKPLTL NFLHPAPSQV VAIGAATVIL KRTGDHMKPL FAFVFLAFLP
61 LAGWAADATQ PEQDALIRPA GDSDLSEFLW IKRPIVIFAD TEADPRFQQQ IEMLRAGAAM
121 LEERDVVVLT DTDPAARAPA RQKLRPRGFA LVLIDKDGGV KLRKPTPWSV RELTRSIDKM
181 PTREQEIRDR RGLD
SEQDB ID: 3101377BED
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGMTVKVHSR SHRVLRARKK GCAMDVILHI GAHRCATTTF QHYLRQNADR LAADGTGFWG
61 PRRTRNGLFR GLLPTPGPAT GRDLRRRAVG RVRLNLARTA LGGTRRLVVS DENMLGSMRQ
121 NLRQAELYPD AGERIARYGE AFDGKISDVV LNIRSPELWW SSALGYGLTR GFGLPGEVAL
181 DWIAQSRRSW RDVIADIGCA LPGARLWVLP FEIFAGRPEA QLEAVTGRPA PHEHSRDWLN
241 ATPRLPELRE ILPPRLAEAL PGGEGRWTPF APDQAAALRE AYADDLMWLA AGADGLAWLM
301 DDPNKKPAGQ TLPRPELTRG RRNEQDRRLA GAG
SEQDB ID: 3101377BEE
Reference:
3101377
Name: methylmalonyl-CoA mutase, Class: EC5.4.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKTDDWRAL AEKELRGRPV EDLTWQTLEG IDVKPLYTDA DTAELPHMGG MPGFGPFTRG
61 VKATMYAGRP WTIRQYAGFS TAEESNAFYR RNLAAGQQGV SVAFDLATHR GYDSDHPRVV
121 GDVGKAGVAI DSVEDMKILF DGIPLDKVSV SMTMNGAVIP ILASFIVAGE EQGHDRSVLS
181 GTIQNDILKE FMVRNTYIYP PEPSMRIISD IIGYTSDNMP KFNSISISGY HMQEAGANLV
241 QELAYTLADG REYVRAAIEA GMDVDKFAGR LSFFFAIGMN FFMEIAKLRA ARTLWHRIMT
301 EFGAKSERSK MLRTHCQTSG VSLQEQDPYN NVIRTAYEAM SAVLGGTQSL HTNALDEAIA
361 LPTDFSARIA RNTQLVLQEE TGVTKVVDPL AGSYYVESLT NDLIEKAWAL IQEVEEMGGM
421 TKAVASGMPK LRIEESAARR QAMIDRGEEV IVGVNKYRKD KEDPIDILDV DNMAVRDAQI
481 ARLERIRASR DEAACAAALD ELTRRAKEGG NLLEAAVEAA RARASVGEIS MAMEKEFGRH
541 RAEVKTLAGV YGAAYEGDEG FAAIQKSIEA FAEEEGRRPR LLVVKMGQDG HDRGAKVIAT
601 AFADIGFDVD VGPLFQTPAE AAQDAIDNDV HVVGISSQAA GHKTLAPQLV EELRKAGAGD
661 IIVICGGVIP QQDYQFLYDH GVKAIFGPGT NIPEAAQDIL KLVRDARAG
SEQDB ID: 3101377BEF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MACRFFAVSL CFGRRTVMEL DHFAVAGETL EAARAHVEAA LGVAMQPGGQ HARFGTHNTL
61 LGLADGLYLE AIAIDPGAPG PERPRWFDLD RFSGPARLSN WICRVPDLQA ALSAAPAGAG
121 DIVDLERGAL SWRMAVPASG VLPYDDRFPA LIQWQGDLHP AAMLAPSGCA LRWLVVTHPE
181 ARALAELCGP LERVVFETGP SGLRAEIDTP HGMRVLA
SEQDB ID: 3101377BEG
Reference:
3101377
Name: phosphinothricin N-acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIRPARALD AADIAGIANH YIRDTLVTFT TELRRPEAVA GDIAARAPAY LVAEAAGAIL
61 GFATYGPFRA GPGYACTREH SILLDPGARG QGAGRALMTE LERVARAEGV HVLVAGISGA
121 NPGAVAFHRA LGFAEVGRLP QVGRKEGRWL DLVLMQKILD ADPN
SEQDB ID: 3101377BEH
Reference:
3101377
Name: DnaJ-like protein, Isotype: DjlA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLWTRITDA LSALAQGESL SAVFERLRTP PEKSVAFAIA VIALGAKMAK ADGRVTRDEV
61 TAFREVFQIA RADEAGAARV FDMARTDVAG YQDYARKIKG MFAEDSTVLC DLMEGLFHIA
121 MADGFYHPGE NEFLEEVAQI FGQTDRQFHA LRARFVPDAP KDPYTVLGVS PDMPMPEIRK
181 VWRNLVRETH PDAMMARGVP EEAIRLAEKK MIDINRAWDE LNGARV
SEQDB ID: 3101377BEJ
Reference:
3101377
Name: endonuclease/exonuclease/phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLATWNIEW FANLFDRNDR LLVDDRWSGR HDVTRAQQVE AIAKVLTALD ADAVLIVEAP
61 NTGRTQNTVR ALGAFAEAFD LRTHAAVMGF ANETHQELAL LYDPARLEAR HDPLGEETGK
121 RGSATPPRFD GTYRIDLDID ATEDLVRFSK PPLELEVTTA TGTRFRMIGA HLKSKAPHGA
181 GSRDEAIRIS ILNRRKQLAQ AIWLRERVED HLTRGDEVVL LGDLNDGPGL DEFEHLFGRS
241 SVEILLEAGL YDPHADKARQ VRPGPLPATA RFQLPGEGRY LSALLDYVMI SKGLMARRPA
301 WRIWHPFDDA ECWQMVELRE ALLTASDHFP VTLDIDI
SEQDB ID: 3101377BEK
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARINLEQLS TFLAVVRLGG VRRAATSLNL TQPAVTARIK NLEDNLDCEL FDRTQSGMKL
61 TKRGELLLGH AEKYEHLTQL VERDLVDPAG VEGRLRLGAS ETIAQCWLPD LVTRLHQLFP
121 KLEIELVVDI SANLRAGLMD RELDLAILLG PLSEFSVNNV ELPDFELAWY AAADTSSEAI
181 AASYLSRPVL TYPRNTRPYR ELKEKLFEQA GPNFSLFPSS SLSACFRLVE ADLGVAVLPR
241 ALGREYVLAG RIREFDPGWV PAPLRFTICY MGEPKSQLIE TAAHMAREVA VDYHGDKNNL
SEQDB ID: 3101377BEL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVGYDRLKT SSLAELRAAI RSGAYRSHTA GLGQGYLQAN LAILPEAYAL DFMRYCQRNP
61 KPCPLIGVSD TGNPMMFTLG RDIDIRTDVP AYNVYRDGRL DSVSADITED WRDDLVVFAL
121 GCSFTFEHAV MRAGVALWHV DNDRTVPMFR SNIETVPAGP FSGKMVVSMR AVPEDRVAEV
181 AEISRAYPLA HGAPVYWGDP AGLGIADIMS PDWGDPAPLG PGEVPMFWAC GVTPQVAIEA
241 ARLPLCITHK PGHMLITDVA EDAEVPVVET AQDKR
SEQDB ID: 3101377BEM
Reference:
3101377
Name: TRAP transporter, Subunit: periplasmic
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRVMFSLAA STALAAPVAA EDLSVVGSWS SLPLHKQYEA PFWSETLPAA SGGKINVSLT
61 THNQMNLGVG DVFRLLGDGV YDVAMTVADY AVADAPELEG LDVPLLALTA DEARAMVDAA
121 RPMVEDIYNA RFNSHVLAIA PYPPQVVFCN AEIAGLDDLN GLKVRASGRM TAKFLEALGA
181 EGVNVSFGEV PGALQKGTVD CAVTGAGSGY SAGWWEVSTH LLPIPLGGWD SVVTAINLDK
241 WNSLDAETQA LISTQVTTAF EAPAWASAQD ALVNDIACLT GNGTCPAGDA RGMTLVEVSE
301 ADFARARDVL VSQVLPDWAE RAGGDWAERW NASVGATVGV AIGTN
SEQDB ID: 3101377BEN
Reference:
3101377
Name: TRAP transporter, Subunit: transmembrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGLRKWNRW IAILTGAILL VCAGIVLLDI VLRRMGSSLG GTDEISGYVM AIATSWGMGF
61 TLLELGHVRI DILRGRAGQI GRAVFDLFAM SVLAGTVTLI AVKCLPVLSR SLANSSRANT
121 PLETPLAWVQ LPWLAGWIWF ALVAWATLVA ALKLVLKGRF QHAEAAIGAF GEEETRT
SEQDB ID: 3101377BEP
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGYVTVGLL GLLAMSIPVG IVLFLLGFGV DAFFSPFPLI RGLGNLVWST SNNATLIAIP
61 FFVLLGEILV RSGIATRTYA ALDRWVSWLP GGLVHANIAT ATMFSATSGS SVATAATVAT
121 VAMPQAEKLG YDPKLFSGAI AAGGTLGIMI PPSINLIVYG FLTQTSIPRL FLAGLLPGLA
181 LALGFMLITV IICLIRPALG GTRRVFSGGE MLRALLQLVP IVLLFTIIIG TIYKGWATPT
241 EAAAVGVAGA ILIAGFFGGI SVQMFIDSIL GTVKITSMIM LVVIGASFLN FTLASAGLGR
301 ELESFLGGLG LSPLGTILVV VVIYIVLGFF IETLSLMVVT IPIIVPLVVA QGYDPIWFGI
361 LMIVLIEMAL ITPPVGLNLY VVQGARQSGK MSEVMLGTIP YVIAMLVMVA ALIAFPAIAL
421 FLPSALGG
SEQDB ID: 3101377BEQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFTAAGTQI DVDIADLVIA GWTGRNADAV QHHIDELARL GVQPPSQVPL FYRVSSTLLV
61 QAPEIEVLGT ATSGEIEPLL INHEGTVWLG LGSDHTDREA EALSVAGSKQ ACPKPVSDML
121 WRFDEVAARL DTLILRCHVE EGGAWVLYQE GPLAQIRPLP ELVAQSGLGA GGAMLCGTLP
181 AIGTVRPATA YRMELVDAAA NRSQRLEYRV RTLPIIK
SEQDB ID: 3101377BER
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRSAHELAV FGGTILHAIL ASLATNKARI IALPSAALFG LVLFLFWGSI DAAVQDRWNV
61 TPGKFALYFA NCKILSRDAA DCAQTRSRIA GDFVDSKDKE QDTRFDELER QLASVIKQQE
121 QSNDQIAQLS LRTIELAQQL ALASEAGDNA RVAELTESIA EVGAELELAN LNAADIQTSI
181 AALSSSLSGA LRSDARVLSF EVSPEVGTLA PNLVAPDSSV ASREKPFVEA FIDGPKSRGS
241 SSHLMSPEVE SYIQPNGTWT LPPSSPRSVV VTSTSAIGSG VQTEFVDADV EEIISNVFEK
301 VGLEPRADEF SKAIPELAPL PNPEGAFAMM QGQLAPPVFE VPKAPSIVSP SPSDLAGLDV
361 QQTISYAFER VDQDALATRL EPWVPDTFPD PSFDTARFID RVDSPKPTQP WDKNWDFKAN
421 PRLTAETQLV LKSLGYDPGV IDGRWGPNTQ AAWDKAQSEL GLSTTKYPTE FVIHDLRGRI
481 PAIDAGQVDG FIAANHSRVS RHSRPDLLGA DAGYGTARDT YATQSRVGGT NSSQIASHEN
541 GIQMPNNWSS ISTTTMNCTN CTDMTGTIGS YEQSDIIGTR SIEHSYEPYS YENNMVLGNS
601 GFGQSDLIVR HQDFMNSFQS PTIDIPSFSV PSVSIPSFSM D
SEQDB ID: 3101377BET
Reference:
3101377
Name: phosphatase, Isotype: ppx/GppA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLQTETSVP DWGPFGRPLF DDPGARALSR IGVVDVGSNS VRMVVFDGAA RSPAYFYNEK
61 VMCALGAGLS ETGRLNPEGR VRALAALRRF QHLADDLDLP PLRVVATAAV REAEDGAEFC
121 AEVKRQTGLT IQVIDGEEEA RLSAQGVLLG WPGAYGLICD IGGASMELAE IGSGQVGRRL
181 TSPLGPLKLR DVPGGRRGRK AHIKQVMSEL RAQLGPQRDR LFLVGGSWRA IARIDMLRRN
241 YPLKVLHEYR MTVRDVHETA RYIERTDLDK LRGKAGVSAS RMALVPFAID VLARLIREFK
301 PKDIAISSYG IREGLLYEQM PQRLRDRDPL IEACYFAESK DARLPGFGKQ LFEFVMPLFK
361 SAPRARVRLI KAACLLHDVS WRAHPDYRAE VCFDNVTRAN LGGLKHSERV FIGLALQHRY
421 RNKREGNRFE PIYDLLDEKS QTQAEILGKA MRFGAMLWLK RDARMGRLTW FPKKRRLELH
481 LPQEAAPLFS EVAEARFQSL VGALDATSEI FIEE
SEQDB ID: 3101377BEU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARQLSFDLP AMTALGREDF FVSPANALAV AMISARIWPG GKLVLTGPAG AGKTHLAHVW
61 ASETGARIIE ATALVEADIP ELAAGPVAVE DVPLLAGDDA RQALLFHLHN LTLANGHPLL
121 LTGRAAPGFW DLSLPDLQSR VDAAQHVALD PPDDALLGAV LAKLFVDRQL SPGPEVISYL
181 VKHMDRSFEA AARTVAALDR IALDEKRDIT RALAVRLLST QAGAA
SEQDB ID: 3101377BEV
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALPVKDQLR YWGLAAAVFV AVLYLLGDVL LPFVIGGAIA YFVDPVADRL ERWGLSRAAA
61 TAVITIASVL LFVLMVLMVV PALITQMIDL INVLPQLFQD LRTFVSTHFP SVLDRESNAH
121 QMIASVIETL KSRSGDLLQT LAGSVGSAIN VVLLLVIVPV VSVYLLLDWD RMIARIDQLL
181 PLDHAPVIRR LAGEIDAVLA SFVRGMGTVC LILGTYYAVA LMIVGLQFGL VVGLIAGLVT
241 FIPYLGALIG GALAIGLALF QFWGDWLSIG LVAAIFALGQ VVEGNLLTPK LVGSSVGLHP
301 VWLLLALSVF GALFGFVGML IAVPVAAALG VLARFGTGQY LGSRLYRGLT VQDDD
SEQDB ID: 3101377BEW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDLLNRMAE ATETETVWTL LVDALAPFGF ERVNYGLTRG LSGASIGDPH DVYIRSTHSP
61 DRVRAHHETG HYLRTAEYRW VLENVGAVSW GWVARERAAG RLSDSECAAM DALQARRRRA
121 GISISFAEGG RRYKGAMGLA AHTHESQEAL DARWPEISAR VLAICNMAHL KFSQLPLPVR
181 SACLNQRQRE LLEWVADGKT MQDIQVLTGL SVSAIEKHLR KARDALGVET SAQAVAKAAF
241 LNLIFVASDA S
SEQDB ID: 3101377BEX
Reference:
3101377
Name: Pro-tRNA synthetase, Class: EC6.1.1.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: proS
Sequence:
1 MRLSRYFLPV LKENPAEAQI VSHRLMLRAG MIKQAQAGIY SWLPLGFKVL RKLENIVHEE
61 QIRAGHIPML MPTLQSADLW RESGRYDDYG QEMLRITDRH GRDMLFGPTN EELITDIFRG
121 HVSSYKDLPL TLYHIQWKFR DEIRPRFGVM RGREFLMKDG YNFDLTKEDA LHAYNRHLVS
181 YIRTYERMGL QAIPMRADSG PIGGDDTHEF LVLAETGESE VFYDSKVTDI RLGEREIDYD
241 SVDQCRAVME EFTSLYARTD ETHDEAVFNQ IPEERRRSAR GIEVGQIFYF GTKYSEPMGA
301 TVQGPDGKPV PVHMGSHGIG VSRLIGAIIE ASHDDKGIIW PEGVTPFHCG IVNLKQGDGE
361 ADAACDQLYA ALSAIGLEPL YDDRNERAGG KFATMDLIGL PWRITVGPRG LKNGVVELTS
421 RKTGESVELS PEEAVKKVAD IYAPHHPHLS REEPMAGRSF HTWL
SEQDB ID: 3101377BEY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIMTMTRPMS PSTKTAPQPA SFDCETAALL RAVMLPLFHG AQTWAELIEA MQRRGYGLAF
61 RDGAFCVIER AGGQRLCGLR FLGLAMEDLV TRMGRPCVLA RPGTWADGDL LSHPPTRSAV
121 H
SEQDB ID: 3101377BF
Reference:
3101377
Name: thiamine biosynthesis protein, Isotype: ThiF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRGHEMSRY ARQMILPQAG GEGQARLAGA RVLVVGAGGL AASALPLLAG AGVGQIDIFD
61 GDHIELSNLH RQTLFAEGDV GRAKAEVAAE RCGALNSGIV LTGTKRSITP ENVILACRDT
121 DLVLDCADSY AASYLLSDTC QALGKPLISA SVLGLGGYVG GFCGGAPSLR AVFPDAPDSA
181 ASCATAGVLG PVVSILGSIQ AQMALSALLE LAPSPLGQMV QIDALSWRNS TFRFDGAPEP
241 ATAFRFVAPS DLSADDLIVE LRTEGEAPQP AHPSARRMTV SEIEISDTNK EKRLALCCAT
301 GLRAWRSAEQ LQPIWPGEIV LVAAATS
SEQDB ID: 3101377BFA
Reference:
3101377
Name: lipoprotein releasing system, Isotype: LolE, Subunit: transmembrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lolE
Sequence:
1 MTPPRGQRTL RAKPEQEPQM ARQPAPFAPF EWKIAWRYLR ARRAEGGVSV MTWISLIGIT
61 LAVFALIATL AVRSGFRSDF VGTILGANAH VTVYNPGEYR ENGQIDRTIP NYAEMAARVA
121 EVAGVTRAAP LVKGQVMAAA QNRNAGVEVF GIATGDLAAL PGITNSDRSY GDLSRFDQGI
181 ALGSGVAREL GVTVGDRIKL ISPNGARTPM GTSPRVNAYE VVYVFSAGRY DIDRTRVYMP
241 FGEAQAYFNR EGVADEIEVM VSEPERLDRV LIPILSAAGD GAQVWTWQDA SGGFLRALEV
301 EDNVMFIILS ILVLIATMNI VSGLIMLVKN KGRDIGILRT IGLSEGSILR VFFICGAFTG
361 ILGTLMGVAL GCLFAIYIDP IFSFVNFVMG GGVWDPAIRG IYALPAELRL GDVLKAAGLS
421 LGLSCIVTYF PARRAARLNP VEALRYE
SEQDB ID: 3101377BFB
Reference:
3101377
Name: lipoprotein releasing system, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lolD
Sequence:
1 MSEPTLRLSG IEKTYLSGTP GEVRVLRGVD LSVEPGEMVA LVAPSGAGKS TLLHISGLLD
61 VPDAGRVEIA GQDMTGRGDR ARTGVRRRDV GFVYQFHHLL PEFTALENVV LPQLANGIGE
121 GEARARARAL LSRVGVEGRA GHRPAALSGG EQQRVAFCRA LANAPRLLLA DEPTGNLDPA
181 TSDQVFDALV ELVRGTGLSA LIATHNLELA ARMDRVVRLS DGRLSAES
SEQDB ID: 3101377BFC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIWIMAGVDG VGQAGCEDHN REIVMYRLVP ALLLLAACAP AAPDGAQLYA RHCAACHGAT
61 GAGDGPEAAR LPVPPADLRN LAASNGGQFP TGAVMATIHG YPGKSHLGAM PEFSALLGGE
121 TVAVTTTDGR VIAAPRALVE LAVHVETLQT P
SEQDB ID: 3101377BFD
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPIIPALLA LGLATPAPAQ DAAEGEQLYR HHCATCHGIE ATGHGPMAGV LVISPADLTT
61 LSEGGELPIA RIVQRIDGRD PLVSHGSPMP IYGPYFEGRD VAIKAETGQP ILTSQPIVDL
121 LAYIATLQKN
SEQDB ID: 3101377BFE
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAMSATVLI LGLIAACTRT DIMPGPAEGE QVFAANCVAC HDYRGQGADL SGGGEAPDLT
61 RIAARRDGAF PRAEILTKID GYGRGKVSAE IMPAFGALLE GELVPVEIDG VMTPTPRPLA
121 ALLSYLESIQ VAEAG
SEQDB ID: 3101377BFF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASVRDRDGW RGRCPLTPAR GGTVQGRSSS FPNRKRPARM ILRLFCLLLL VAACGRPLTE
61 AERAFATRLH GDALDISRVR LVEGAPVGAV TFHRKPRPRV TCRERILPPQ KEEIVTVKPA
121 AVTLFHKVYF ARDWYLDDYM PDYPDRVNLI AAMLLAHELT HVWQWQNRRV TGYHPLRAAA
181 EHGASDDPYL FDLREAPDFL SYGYEQQGAI VEEYVCCRAL APEAPRTRRL HDMLAAVMPV
241 TALPQSRRES DVLLPWRDAE LTGICD
SEQDB ID: 3101377BFG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHHFDEILGL AAARHGGEAA LEAKLTRPKS PAELTAMPED RWLSVITKCV FQAGFNWKVI
61 EAKWDGFEAA FDGFDIGRCA LMDDEKFDAL LQDARIVRNG TKIATVRDNA AFLLELRDEG
121 GAGQVLGGWP SSDYVGLLDL LKRRGSRLGG TTAQYAMRFA GRDSFILSRD VIARLIAEGV
181 VDKAPASKKA MAQVQAAFNT WMEQSGRSLS EISRVLAMSL
SEQDB ID: 3101377BFH
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTPDTAQTL LSEHFAEWVQ ALAPEVLAID REHALVRMPL GPHLARTGGI VSGQALAALA
61 DTSMVLAAIA QEDALRLFAT TDLHTQFLRP GVGRAILCRA QVVRAGKALV FTRADMHEED
121 SGKLVATATA TFYAP
SEQDB ID: 3101377BFJ
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVLRNRRIV HPIGSTGRTE MKRVGLGLAL VALAGGVNAA EMGASDEPIK LAINEWTGQH
61 VTTHVAGEML RAAGYKVEYV TAGMMNQFQA LADGDIHATL EIWSSNVSDE YAKKVAEGTV
121 TEIGDLGLNA REGIAYPAHV ADLCPGLPAW EALKDCAQVF ASAETLPMGR LVDYPADWGT
181 PGADRMTGLD LPIKAVPAGS EGALIAELRA STERKSPLLI TFWQPHWAMS AYDVKFIDLP
241 PGEEACFNDA SWGPNPNAVN DCDFSPSRIF KASWSGFAEK WPAAHEILSN YQLSVEAQQP
301 MMGAIDVDGG KVEEVVAAWM TENEGSWRPV VDAATK
SEQDB ID: 3101377BFK
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.32
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEATTPAIT CQNLWQVFGP GANDALAEAL ARSGGDAEAA AAELRDKGLI PAVQDASFEV
61 REGELFVIMG LSGSGKSTLI RCISQLLPGT GGEIRIEGDN VVGASKKRLT ELRRRKLGMV
121 FQHFGLFPHM TVAENVAYPL KVQGVGRKER RARAQEVISL VGLEGREDSF PRQLSGGQRQ
181 RVGIARSLAV NPDIWFLDEP FSALDPLIRR QLQDEFLRIQ ATLKKSIVFI THDIAEALKL
241 ADRIAIMRDG KIVQIGTPTE IVLNPVDDYV REFSKDVAKG RHAKVASVMR AGVEEQGPDD
301 PGLTAGMTLD TALARCMQLY QPVPVRDASG AIVGTVQPSD LAAALQVDDT
SEQDB ID: 3101377BFL
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAADISVPR VARLTVGTWA ALITALVGAL CLALEPVAPW LGAWPKAWVL PATDWVGTVM
61 TAFLAWFKPV ARLFSAVMVY PMDAANWVLN ATPWPLVIGI VTALGWYLGG AAMAALGLGG
121 LGFVLASGYW HEGMNTLALV AVSVPLALLV GGAIGILANE VPRIRGAVQA VLDIMQTVPT
181 FAYLTPLLAL FGFGPVVGLI ASAIYAAPPM ARNVMLGLER VEAEVKEAAI MSGGTRMQQL
241 FQVEIPSASR QIMVGFNQCL MAALSMVIIA AVIGGFNDIG WEVLLTMRKA QFGAALLAGM
301 VIVAFAVIID RMSAVLATER KRHDIRVVWA LLGLALAFTL VFWTRLPAAS DLTLLDPVAV
361 SLDQGLTRFT QANGAALDAL KNNTLYYVLL PLRIGLDQAV LPFTWGFSWT PQMSSALFAL
421 GAVLALGMAW AGRASAGLMI LIGFGMIETG ITNLPWPFVL TGAAALGYVA GGRRLALMVV
481 ILLGTILVSG LWDRALLSLY LCGASVFACA VLGGAIGVAS AVWTPVWRVV RPICDMLQTI
541 PLFVFLIPVL MVFQIGEFSA FLAICAYAIV PMIRYTRHGL VDTPDEMMEA AISSGATDWQ
601 ILRDVRAPYA APTILLGLNQ TILYAFSMLV IAALIGTTGL GQSIYLALGQ ADVGLGISAG
661 AAMAILALIA DRLVQGFAEE RRKALGL
SEQDB ID: 3101377BFM
Reference:
3101377
Name: NnrU-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMGGWAEFVA ALAVFLLSHV IPVRPPVRPW LVARLGARGF GIAYSLFSIA VLGWLILAAA
61 RAPYVEVIPP LPALRWVPIL IMLPVCLLAV AGLRAVNPLS FGGLGRGVFD PTRPGILALS
121 RHPLLLALAL WSGAHLLANG SLAHVILFGL FAGFAVMGMA LIDRRKRREL GADWARLAAG
181 TARLSPRGLP ALLAPRVLWP AALLYLALLL AHAPVIGVSP LP
SEQDB ID: 3101377BFN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRERRTQP MHLAYVTTTA RGATDRLLSE VATRLDAKGV RLAGVVQTNT ECADNARCDM
61 DLRVMPGPEV IRISQTLGTG SRGCRLDPGE LERAVGLVSA ALAEDPELLI VNKFGKHEAD
121 GRGFRPLIAE ALARDIPVLL GVNGLNEERF LAFTEGAAVK LSPEPDALVD WVEKVRASRI
181 QAA
SEQDB ID: 3101377BFP
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKNDQLDQW DRENFFHPST HLAQHARGDS ANRVIKTASG VFIEDRDGNK LLDAFAGLYC
61 VNVGYGRQEI ADAIADQARE LAYYHSYVGH GTEASITLAK MILDRAPANM SKVYFGLGGS
121 DANETNVKLI WYYNNILGRP EKKKIISRWR GYHGSGLVTG SLTGLELFHK KFDLPVNQVI
181 HTEAPYYFRR ADPDQSEAQF VAHCAAELEA LIEREGADTI AAFIGEPVLG TGGIVPPPAG
241 YWEAIQAVLR KHDILLIADE VVTGFGRLGT MFGSDHYGIE ADIITIAKGL TSAYAPLSGS
301 IISDKVWKVL EQGTDENGPI GHGWTYSAHP IGAAAGVANL KLIDRLNLVQ NAGETGAYLN
361 ATMTEALAGH PNVGEVRGAG MLCAVEFVKD KDSRLFFDAA DKIGPQISAK LLEQDKVIAR
421 AMPQGDILGF APPFCLSRAE ADQVVDATLR AVRTVLG
SEQDB ID: 3101377BFQ
Reference:
3101377
Name: succinic semialdehyde dehydrogenase, Class: EC1.2.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gabD-1
Sequence:
1 MTETALSARA DIADKALVRS FSYINGKWCA AANGETFAVT DPADGTELGH AASLSAEESS
61 AAVDAAQAAF PAWAGRLPQE RAALLRRWYE LLLEHKEDLA RIMVLEQGKP LSEARGEIDY
121 GAAFVEFYAE EAKRPNIEGV TSHLPDAEVE LWREPVGVAA LITPWNFPSA MLTRKAAAAL
181 AAGCTVVAHP SRETPFSALA LAELAERAGV PPGVFNVVTG TAATVVEPWT RDTRVRALSF
241 TGSTEIGKLL YRQSADTVKR LVMELGGHAP VIVFKDCDLD KAVSETIKAK FATSGQDCLG
301 ANRILVERPV YADFCARFTL AAQALTLGPG MADCDLGPLM NEQAVQKQED HVADALARGA
361 RLACGGRRHP RGPLFYEPTV LVDVPPDALI MSQETFGPVA AIAPFDTEEE AVARANDSEY
421 GLVAYVHSND PRRIYRLSRA LQYGMVAVNR TKVTGAPIPF GGTKQSGLGR EGARLGMEAF
481 TEVKYICRDW A
SEQDB ID: 3101377BFR
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLDQRDLDI LRVLSTEGRI TKAALADRIG LSPTPCWDRL KKLEQAGLIE GYGARINLKK
61 LAPHVTVFVA AEIADHTAAS FRAFEAAMQR YEEVTACWAL GGGFDYLLQI VTRDIDAYQR
121 LIDEMLDDRI GLSRYFTYVV TKPVKGTGAP PLKILLGLE
SEQDB ID: 3101377BFT
Reference:
3101377
Name: succinyl-Glu desuccinylase/aspartoacylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQKNPISPTI PLDRDGVFHG FLKLPHSRDD SAWGSVMIPL TVIKNGAGPT ALLTGANHGD
61 EYEGPVALHE LAATTSAEDV TGRLIIVPAF NYPAFRAGSR TSPIDRGNLN RSFPGRPDGT
121 VTEKIADYFQ RTLLPMADLA VDFHSGGKTL DFVPFAAAHI LEDKATQAAC FAAMKAFNAP
181 YSVELLEIDS AGMYDTAVEE MGKVLVTTEL GGGGSSSARS NAIAKKGLRN VLIHAGILKG
241 EMQLDETVNL TMPDDDCFVF SEGDGLFEMM IDLGAPVAKG DLLARVWPLD RTGQPPVEYR
301 ARRAGLVISR HFPGLIKSGD CVAVVGVTGA
SEQDB ID: 3101377BFU
Reference:
3101377
Name: peptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADPKLFFTR AEFQARLDKT RAEMARRGLD LLIVTDPSNM NWLTGYDGWS FYVHQCVVLT
61 LEGEPLWYGR GQDANGALRT CFMDPVNIIG YPDHYVQSTE RHPMDYLSAR LKDRGLDGGV
121 IGVEMDNYWF TAAAFMSLQK HLPNARFTDA TALVNWQRAV KSEAELTYMR QAGKIVERMH
181 QRIFERVEPG MRKCDLVADI YDAGLRYDAG LGFGGDYPAI VPLLPSGSDA AAPHLTWDDL
241 PMKSGEGTFF EIAGVMHRYH CPLSRTVFLG KPTQTFLDAE KAVLEGMEAG LEMARAGNTC
301 EDIAKAFFKV LKSYGIEKDS RTGYPIGVSY PPDWGERTMS LRPGDTTVLQ ENMTFHFMTG
361 LWMEDWGFEI TESIRIGADG PECLSNVPRK MFVKD
SEQDB ID: 3101377BFV
Reference:
3101377
Name: Orn cyclodeaminase/mu-crystallin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTWMWKPTS KEAQMPDIRI LTEAELRDLV PLDLDAVDCV EQGFTTLAGG KVVMPPIMTL
61 GVPDHNGEVC VKTAYVPGID SFAMKMSPGF FDNPKIGLPS TTGLMVVFSS RTGILEALLL
121 DNGYLTDVRT AAAGAVAARH LARAEASHVC IIGAGVQARM QLQAMTLVRD IESAAIWARD
181 VAKAEAAAAS LRQDLGIDVT VGTDIAQAVS PADIVITTTP ASSPVIRAEW LQPGQLVIAM
241 GSDQEHKGEL EPACLTKADL YVPDSQAQCA LKGELRSAIE AGLIAAGQSF AELGQVTSGQ
301 TPGRRSDREL IIADLTGTGV QDTAIATLAG NRADATGAGA TFTS
SEQDB ID: 3101377BFW
Reference:
3101377
Name: Thr dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTKITLQDS IRARARIAGR IRETPLVESP SLSSLSGRQV LLKLESRQIT GSFKLRGATN
61 AVLSLTDTQR AAGVVGVSTG NHGRGLAYAA AEAEVRCIIC MSELVPQNKV DGIRSHGAEV
121 RILGRSQDDA QQEVDRLVRD GMTMLPPFDH PDIIAGQGTV ALEMLDQAPD LETVLVPLSG
181 GGLISGVGMV LKAANPDIRV IGVSMERGAA MYECLQAGRP VQVAELPTLA DSLGGGIGLD
241 NAYTFEMTKA FVDEVVLVSE AEIAAAIRHA YFEEREVIEG SGSVGIAALL AGKIGNPGRC
301 VSLVSGQNIA MDLHKRIIDG EDVDVEADIK GGADA
SEQDB ID: 3101377BFX
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALDTHSAPS RVPARLDDRP VRKRIALVAL ATDHTSERDF ARICDPDQVG VYTNRIAFEN
61 PTNKETLLKT GPRLTEAAAR ILPGEEVDVV AYCCTAASIV LGNDTVTRHL NAAKPGTPCV
121 TPSSAAFDAF AALGVRRVSL LTPYSPDVTD EMAQYFAVHG PEVVNAACFG LTDDREMARI
181 SEDCIIEAAL AAFDKDAEAL FLSCTALRAA TCAQRIEDRL GKPVVTSNQA MIWRCLRLAG
241 IPDMVPGYGR LFHL
SEQDB ID: 3101377BFY
Reference:
3101377
Name: universal stress protein family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFASILVPFD GSHGAEAALA KAAALACLCG AELTLLTVYR HHSPLEASMH VVRPDEPADL
61 DDIMRTHARE VAEHGKARAA AYGVPAPRAF VKGGPVARTI AGFAKEHGHD LTVIGSRGLG
121 SFERALLGSV SHKVTSLSET PVLVV
SEQDB ID: 3101377BG
Reference:
3101377
Name: ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPASGPGAL RNSCNRFGRA RSFSLRPPHH ERKRDMKHLV TALALLAATP ALAQDKMTLL
61 LDWFINPDHG PIIVAQEKGY FAERGLEVEI VAPADPSAPP RLVAAGQADL AVSYQPQLHL
121 QIHEGLPLKR VGTLVATPLN CLLVLDNGPI KSPADLKGKK IGFSVAGVEE AILTTVLGKY
181 DVALSDVEMI NVNFSLSPAL MSGQVDAVIG AYRNFELNQM DIEGEPGRCF YIEEEGVPSY
241 DELIYVANPD RMDAGKIARF LEATEKATQF IVNNPQASWE IFSATSPELQ DELNKRAWAD
301 TLPRFALRPA GFDAGRYARF ETFLKDSGMI DSVNSVSAIT IDVTAE
SEQDB ID: 3101377BGA
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAATIFLTMI VLLLLGFPMM IPLIAGAFIG FLMLFGDLAR TETMVQQMLA GIRPASLIAV
61 PMFIFAADIM TRGQSAGRLI NVVMAYVGHI RGGLAISTAA ACTMFGAVSG STQATVVAIG
121 SPLRPRMLKA GYKDSFVLAL IVNASDIAFL IPPSIGMIIY GVVSSTSIAE LFIAGIGPGL
181 LILVLFSAYA YIYAVRNDVP TEPRASWAER ARTMRQALWP MGFPVIIIGG IYGGVFSPTE
241 AAAACVLYAL VLEVLVFRSM SLADVYDTAK STGLITAIVF ILVGAGAAFS WVISFAQVPQ
301 QILGAIGIAE MGPIGVLFVI SIAFFIGCMF VDPIVVILVL VPVFAPVVKS VGLDPVLVGT
361 IITLQVAIGS ATPPFGCDIF TAIAVFKRPY AEVVRGTPPF ILMLLGVSVA LIFFPQIALF
421 LRDLAFSK
SEQDB ID: 3101377BGB
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQQTHESALP GFLGMLDSAI SRIESFLLAM GVLLMAANTV ANVVGRFVLG NSIFFSEELN
61 RILIILITFA GISYAARNAR HIRMSAVYDL LPARLRKGMM VVISVVTAAF MFLLCYYAAK
121 YIGSQASRGR VLPALQIPVW VILIWVPAGF FMTGAQYLLT AVRNLTSSGI YLSTHVQEGY
181 EDAEEIEI
SEQDB ID: 3101377BGC
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQSITFTFG AVAAAGIALA AGTAAQADTW RYAFEEAMTD VQGVYAQKFK EEIEANSDHE
61 IQLFPYGTLG ESADIMEQTQ DGILQFVDQS PGFTGSLIPE AQVFFVPYLL PTDQDHLARF
121 FKESKAINDM FKPLYADQGL ELLNMFPEGE VAMTTKTPVT TCSDLDEVKF RVMTNPLLVE
181 SYKAFGATPT PLPWGEVYGG LQTNVIQGQE NPTFFLYSTK IYEVTDYITY AGHNNFTTAV
241 MANKDFYDGL SAEDQQLVQN AALAAYDHTV VYQQQAADTE LAKIMEAKPE MQVTVLTDEQ
301 RSCFKEAAAE VEAKFIEMTG DSGAAILKQM KADLAATAN
SEQDB ID: 3101377BGD
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNWLPDPSA LASPLHSSLA LAIAKAISEG KLPKGTQLPT HRKLAEELGL SVHTVSKAYE
61 SLRRQRLIDG QVGRGSYVLD LNTPDDQPFQ LSSERGRNFD LSISRPAFSQ RHAELFQQVL
121 ADLPQGLDPS YYLACRPNVG HDAHRAAGET WLRICGLDVP SERIIMTNGV SHGMSAALSA
181 LARPGDTVVS SRITHHLLVS GCSYLGLNLV GIDFDQDGML PDALDRHCSE NNAKVLFLLP
241 SLANTTVEMI PEERRQALVQ VARKHNLYII ENDAFGPVAE DRPVPVAALA PERTIYLTTF
301 TKCTVSGLRA GYMAAPEHLL PALTGRIVVF GWMATPLMCE IATRWVLDGT ALELALWQRR
361 ALAERYEIAS QALQGHQWRG HPSALHLWLP LESGWTTSSF VAYARQLKVA VAPDAPFLTP
421 KTPPPNAVRI SLGSVQDLSR FKQAMELVGG MLSRPPEGVA PLAF
SEQDB ID: 3101377BGE
Reference:
3101377
Name: RNA methyltransferase, Isotype: TrmH-family group 3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKPKWVVEK EQAKKASAAE TVWLFGLHAV RDALMNPKRE KLRLIVTLNA REKLAEAIDA
61 AGIEPELADA RRFSAPIDPG SVHQGAALEV KPLNWGSLAE VAIGAENPRV ILLDRVTDPH
121 NVGAILRSAE VLGASAVIGT RHHSAPETGA LAKTASGALE RQPYLRMRNL ADAITELQGM
181 GYLVLGLDGE ASETIEAALA GQTDRPVALV LGAEGPGLRQ KTKETVDKLV KIDAAGGFGS
241 LNVSNAAAIA LYASKAH
SEQDB ID: 3101377BGF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRLVTCCYC GARATLAADR SGMLACEACG APIQQVDSAA QAPRPTAVPE PAAAAVAAAA
61 ERPAPRQAEK PEKKPKKRKK RKGLFSRALE EVWDKVEDIF D
SEQDB ID: 3101377BGG
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMLNRRTLL SGLAGALTAS ALPLWAETPV FYADDGAAIR GYDTVAYFTQ GAPVQGAPAI
61 AVMWKGAVWH FASHENRAAF EANPRAFAPQ FGGYCAYAVA RGYTTDTDPT AWRIVDGELF
121 LIHSPEVARL WAEDIAGNIA GARRNWPSVL DR
SEQDB ID: 3101377BGH
Reference:
3101377
Name: CoA-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAMFDYSDDH LKRILKRTKV IAVVGVSMNP VRPSYYVARY LALKGYRVIP VNPGHAGQRL
61 FGETVRAGLS EISEPVDMVD IFRRSEAVPP IVEEALEAFP GLKTIWMQIG IEHAEAAARA
121 EARGVDVIQN RCPKIEYQRL FGELRMGGFA TGIISSKL
SEQDB ID: 3101377BGJ
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTFRALLAI LAVLLITACT DTQSVSQKDV NALAQQLRAL GPDVDPAEAQ RAAEISYSYG
61 RQLARDYNVT SSPIVHNAKV LNGFRERGLC VHYAQDMQKR LNQENFRTLV VHRAIAEPDS
121 IWRIDHSTAI LSRRGDDMFD GVVLDPWRYG GELFWSLTRE DTRYNWRPQR EVLEKKAAEK
181 LARQPS
SEQDB ID: 3101377BGK
Reference:
3101377
Name: phosphoribosyl-ATP pyrophosphohydrolase, Class: EC3.6.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSILHDLAAT IEARKGADPD SSWTAKLLAK GPEKCAEKFG EEAIEAIIEA VKGDRAKLVS
61 EGADVLYHFL VMLAARDVAL DDVLAELAHR QGQSGIAEKA ARPKG
SEQDB ID: 3101377BGL
Reference:
3101377
Name: imidazoleglycerol phosphate synthase, Subunit: cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisF
Sequence:
1 MLKTRIIPCL DVADGRVVKG VNFVGLRDAG DPVDAARAYD AAGADEICFL DIHATHENRG
61 TMFDVVSRTA EQCFVPLTVG GGVRTHADVR ALLLAGADKV SFNSAAVANP DVIAEAADRF
121 GSQCIVCAID AKTVEPGRWE IFTHGGRKPT GIDAVEFARL VTAKGAGEIL LTSMDRDGTK
181 SGFNLPLTRA IADAVDVPVI ASGGVGTLDH LVEGVTEGHA SAVLAASIFH FGEYTIREAK
241 EHMAAAGIPM RLT
SEQDB ID: 3101377BGM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRTYPIVEK TPLPATAQLW QAVQPGDFID GYAVASQISP RAAAEIGLSL PGWANALLRL
61 RNWIVRPLGL KTDVSDSGDK AIFPVTYEGA DELILGADDS HLNFRISLVQ QAGRLHMATW
121 VHRNNLLGRV YLAVVMPFHI LIVRGAMRRI ARHGGAIASA PGAQ
SEQDB ID: 3101377BGN
Reference:
3101377
Name: HisA protein, Class: EC5.3.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisA
Sequence:
1 MILYPAIDLK DGQAVRLVHG EMDQATVFND NPAAQALEFV AAGCEWLHLV DLNGAFAGEP
61 VNAAPVEAIL EQCKVPAQLG GGIRDMATIE RWLDKGLARV ILGTVAVENP DLVREAARAF
121 PGKVAVGIDA RNGRVATKGW AEETDVMVTD LAKSFEDAGV AAIIYTDILR DGAMKGPNIK
181 ATADLARAVS IPVIASGGVS SLEDLIALRD CGASLNGAIS GRALYDGALD LKQALAALKG
SEQDB ID: 3101377BGP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRLILAAGA TLALAGMAMA DPAAGTWQTE PGDTGGYLHV AIAPCGAQVC GTIKAAYDKN
61 GAKQNDYEHA GKRMLWDMQP GGDGSYSGGQ IWAPDSGKTY GSKMSLAGNT LTVKGCVAGG
121 LICRGQAWKR VN
SEQDB ID: 3101377BGQ
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLMPRQTTPP LSLPLVGGGR FDLSAETSTR WTLICFYRGL HCPICATYLK ELEKRVADFA
61 ERGVACVAVS SDSEERAQAM AEKVGGGTLR FAYDLPLAEA RDWGLYISTS RGKTSIGIEE
121 PALFSEPGLF LVTPERTLYY GAVQTMPFVR PHFSELVAAL DFAIPNNYPA RGEYTGAV
SEQDB ID: 3101377BGR
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSCSALSQGL VFGKSEFPDR GSDTRMDRLT ALMERFQLRV EAAAPEDANL LALAGADGTP
61 GELLFYPAGT GRAGDPLFAA RVSWSGESNP FLAALPEVVR FDLSADPEAR AVVELIRVEV
121 AARRCGAQSV VNRLGEVLMV RLLRDQIAQG ATRPGLLAGL ADPRLSRAIV AIHDHPGRVW
181 SNGDLAAEAG LSLSRFAELF AAQVGETPMG YLRRWRLILA AQDLGRGDRV DRVARRYAYG
241 SPEAFARAFR RAHGVAPMSL RAG
SEQDB ID: 3101377BGT
Reference:
3101377
Name: imidazole glycerol phosphate synthase, Subunit: Gln amidotransferase, Class: EC2.4.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisH
Sequence:
1 MLTAIIDYES GNLHSAEKAF QRMARETGAG EVVVTSDADL VARADRLVLP GDGAFPACAA
61 ELRGHKGLYD AMVEAVEQKG RPFLGICVGM QLMATTGHEY EETPGLGWVA GDVVRITPEN
121 AALKVPHMGW NDLVIEAAHP IFDGIAGGDH VYFVHSYHFR VTNPTERLAH VDYGGPVTAV
181 VGRDTMVGLQ FHPEKSQAIG LRMIGNFLTW TP
SEQDB ID: 3101377BGU
Reference:
3101377
Name: imidazoleglycerol phosphate dehydratase, Class: EC4.2.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisB
Sequence:
1 MRRASISRQT AETEISVDIN LDGTGAYDNQ TGVGFFDHML DQLARHSLID MTISAKGDYH
61 IDDHHTVEDT GIALGQALSA ALGDKRGIRR YGECHLPMDD AQVRCALDLS GRPFLVWNVD
121 LPTAKIGTFD TELVREFFQA FSTHGGITLH VDQLHGLNSH HIAEAAFKAV ARALRQAVES
181 DPRKGDAIPS TKGTL
SEQDB ID: 3101377BGV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAARVSLWPN QHQRGGMTTC VFIQIRCKPG STYKVAEDIA LREIHSELYS TSGEYDLLMK
61 LYIPAGADVG KYINDHLLVI PNIERSLTTM TFKAF
SEQDB ID: 3101377BGW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARGSDHPAP GYPGRAALAA ALLCAGLLPV PALGEADCTQ DAMIVFDASG SMAEMGYNGL
61 DRPRILDARE ALHDALPRIA ALRRLGLVTY GAAMDGDADG DLCKRVSMPF TPSPNAAGQI
121 LNLIDAIEPD GNTALTDAVN LAARVFDQPP RPGVIVLVTD GDETCGGAPC ALAADLARDT
181 PGLTVHVIGF RVRSQFFGWE GGDGNPTVPE TISPAECLAQ ATGGEYVSTE TVEELIRALN
241 QTLGCPLYGA LAPLRTP
SEQDB ID: 3101377BGX
Reference:
3101377
Name: aminotransferase, Isotype: class III family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPVIYPTTN LTATEQLVLD RGKGIYVYDT DGNEYIEGLA GLWCTSLGYD NAEVIGAITD
61 QLNRLPFTHT FGGKTHEPIM KLAEKLKAMV PVEDAYFFFG NSGSDANDTH YKMLRYYFNA
121 IGKPEKRKII TRERGYHGVT VAAGSLTSLP ANLAHFDAPV EALHILRSDA PHYYTGRQGN
181 ETEAQFVDRI LDNLEQQILA EGADTIAAMI VEPITGASGV IVPPEGYYEK LQTLLRKHDI
241 LVWADEVICG FGRTGADFGC TTMGIKPDLM TFAKQLSSAY FPISASVIPG WMYEKMIAPS
301 AAVGVFGHGY TYSGHPVACA AALKTLEIYE RDDLFGHAAE VGAHMQEQLR AIFTDHPLVG
361 EVRGKGLIAA LELVSNKTTG ATIEKGAGGA TVQRLAQENG LLIRAVAGNS AALCPPLIIT
421 KEEVDEMLRR LKTAVDGAYA ELKDKGLLAA
SEQDB ID: 3101377BGY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLEPDNRGKV QIMKLAAIAL ALGATLAGPV LSQSLEPWGS SDYWDVLIDP TLGNGCLIQS
61 TFTDGSVVRI GFDRVEGAGY VTAFNEAWGD IVEGEWYPVL FALDGAEYEA EARGMYLEGV
121 PGADILFDNP DFLYDIAAKY TMTLYNESGE VMSIDLTGSM AALEAAIECQ EEMG
SEQDB ID: 3101377BH
Reference:
3101377
Name: TENA/THI-4 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAAAGQPWR DYTRHAFVEG MKDGSLARDA FVHYLRQDYV FLIHFARAWA LAVVKGETHA
61 EMLAAVGTVN TLVVEEMQLH VGVCEAAGIS KDALFATPER PENLAYTRFV LEAGYSGDLA
121 DLLAALAPCV MGYGEIGARL ATEATSEAYK DWIDTYAGPE YQAACKAVGE LMDQALTRRI
181 GADFEASPRW ERLCRTFRTA TELEVGFWQM GLTP
SEQDB ID: 3101377BHA
Reference:
3101377
Name: pyruvate carboxylase, Class: EC6.4.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyc
Sequence:
1 MTDFKKILIA NRGEIAIRVM RAANEMGKKT VAVYAEEDKL GLHRFKADEA YRIGEGMGPV
61 AAYLSIPEII RVAKECGADA IHPGYGLLSE NPDFVDACVQ NGITFIGPRA ETMRSLGDKA
121 SARKVAIAAG VPVIPATEVL GDDMDAIRKE AAEIGYPLML KASWGGGGRG MRPIHSEKEL
181 AEKVMEGRRE AEAAFGNGEG YLEKMIIRAR HVEVQILGDK HGEIYHLWER DCSVQRRNQK
241 VVERAPAPYL SQAQREELCD LGRRICAHVN YECAGTVEFL MDMDSGNFYF IEVNPRVQVE
301 HTVTEEVTGI DIVQAQILIA EGKPLAEATG KASQGEIALN GHALQTRITT EDPLNNFIPD
361 YGRITAYRSA TGMGIRLDGG TAYAGGVITR YYDSLLTKVT AWAPTPEKAI ARMDRALREF
421 RIRGVSTNIA FVENLLKHPT FLSNEYTTKF IDTTPDLFQF KKRRDRGTKV LTYIADITVN
481 GHPETRDRPM PAAEARMPKP PAKRGEPRMG TRNLLEQKGP QAVADWMKAQ RQLLITDTTM
541 RDGHQSLLAT RMRSIDMIRV APAYAANLPQ LFSVECWGGA TFDVAYRFLQ ECPWQRLRDL
601 REAMPNLMTQ MLLRGANGVG YTNYPDNVVR EFVRQAAKGI DVFRVFDSLN WVENMRVAMD
661 AVVEQNKICE GTICYTGDIL NPERAKYDLK YYVAMGKQLR DAGAHVLGLK DMAGLLKPAA
721 ARVLIRALKE EVGLPIHFHT HDTAGIASAT ILAASEAGVD AVDCAMDSFS GNTSQATLGT
781 VVEALRHTDR DTGLDVKAIR EISDYFEAVR AQYAAFESGL QAPASEVYLH EMPGGQFTNL
841 KAQARSMGLE DRWHEVAQMY ADVNQMFGDI VKVTPSSKVV GDMALMMVSQ GLTRAQVEDP
901 KSDVAFPDSV VDMMRGNLGQ PPGGFPTVIL SKVLKGEAPN TERPGAHLPP VDLEEVRSKV
961 SAELEGKEVD DEDLNGYLMY PKVFMDYMGR HRQYGPVRTL PTRTFFYGME PGEEITAEID
1021 PGKTLEIRCQ AIGETDENGE VKVFFELNGQ PRVIRVPNRL VKSTTMQRPK AEPGNANHLG
1081 APMPGVVATV AVQAGQQVKA GDLLLTIEAM KMETGIHAER GATVKSVHVQ PGGQIDAKDL
1141 LVELE
SEQDB ID: 3101377BHB
Reference:
3101377
Name: FMN-dependent alpha-hydroxy acid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLKWRARRR LPRFVWEYLD SGTGVEATKA RNRASLDRVG FLPSVLHGPL EHDLTTTLLG
61 TTYALPFGVA PVGMSGLIWP DAEGHLARAA AAANIPYCLS TVASQSPEDL APHIGPQAWF
121 QLYPPKNPDI RRDLVERARQ AGFKTLVLTV DVPVASRRER QVRSGLTQPP TLTPRLLAQV
181 AMRPAWAMGM ARRGMPHMRT LDKYSQGLTN LPPTAHIGYL LRTSPTEDYV AWLRDAWQGP
241 FVVKGVLRPE DGERMERLGV DALWVSNHAG RQFDGAPGAA EMLPHIRAAT RLPLIFDSGV
301 ESGLDILRAL ALGADFVMLG RAFHFGLAAL GPRGAAHAID ILQKDIESNL GQLGAARLTD
361 LPPTRPLSIA Q
SEQDB ID: 3101377BHC
Reference:
3101377
Name: diguanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQKAFASWR LRWLGLVLFL CAMVAVAAWS VFRLPVPVVD RMIEADIRKQ AQLWSRGITM
61 HLDHLSETFA TGALDEHDIE FLMLMPNTSD AYRLTLLAAD GRVIWSTRED EIGTLTQDAP
121 FFDVVARGGT HFTLSERPIT EVDGLLPVDE PVQTGSLRCI AEVYTPVMLN GQFLGALKFY
181 ADVSERRQTF AKRLQLVLAA LSSFALLTMC ITMLVIYRTN RARFAALQSR SETERTLMDE
241 QLRLAREVRL LGELNEWLQS CRSLEELFAM VSRFMEHILP DAEGSLYVYS NSRDVLDGSA
301 GWNGGAFKDH IHPEACWGLR RGRSYEYGAS EVDFVCDHAE PHDGRPYFCF PVLAHGETVG
361 LMHLRAQPGA EAEFSASKRL AQMCAEQISM AIANVRMRDQ LHDQSVRDPL TGLFNRRHLT
421 ETLRKQLLHC QTRGGRLSLI AVDVDHFKKF NDTHGHDAGD MVLRAVGAAL EQACDRDEVA
481 CRIGGEEFML VLLDCAPEDA LTRAELLRQS VEEVSVRYGE KTLPRVTISA GVAHYPRHGT
541 MPQDLMRAAD DALYEAKGLG RNQVRVAQSP GTDPREAQAA KPAKAKDPKT PEGKFAAE
SEQDB ID: 3101377BHD
Reference:
3101377
Name: DNA helicase, Isotype: II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAARPAPYLD DLNPAQREAV ERLDGPVLML AGAGTGKTKA LTARIVHLLM TGRARPNEIL
61 AVTFTNKAAR EMKNRVGRLL GQPAEGMPWL GTFHSICVKL LRRHAELVDL KSNFTILDTD
121 DQLRLLKQLV QAANIDDKRW PARLLANIID GWKNKALTPD KLPAAEAGAY NHRGPELYAQ
181 YQTRLRELNA VDFGDLLLHM VTIFQTHPDV LEQYQRWFRY VLVDEYQDTN IAQYLWLRLL
241 AGGHRNICCV GDDDQSIYGW RGAEVGNILR FEKDFPGAHV VRLEQNYRST PHILAAASNV
301 IRGNEGRLGK ELWTDAQEGE KVRLIGHWDG EEEARWIGEE IEAMQGGTRG VRPISLDEMA
361 ILVRAAHQMR AFEDRFLTIG LPYKVIGGPR FYERMEIRDA MAYFRLVTSP EDDLAFERIV
421 NTPKRGLGDK AQQAIRAVAR ENGVSLVEGA RIAVENGLIK GKGGKALGEL TDGLARWAAL
481 TRGPRIEIDD DSVIEDGAAP IQFGAPEMSH IELAQVILDE SGYTAMWQND KTPEAPGRLE
541 NLKELVNQLD NFENLQGFLE HVSLVMDNEQ DSGGAKVSIM TLHAAKGLEF PAVFLPGWED
601 GLFPSQRSMD ESGLKGLEEE RRLAYVGITR AEEVCTISFA ANRRVFGQWQ NALPSRFIDE
661 LPEDHVEVLT PPGLYGGGLS SPGIESRAAA ADGYNSPGWK RLQARQGQHG LSQPRESRNT
721 VIDLAAVASF TLSARVFHQK FGYGSVVGVE GDKVEVAFDK AGLKKVVARF LCAPDDVPF
SEQDB ID: 3101377BHE
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELLWILMVL LSAVTHPLRD LTLKGVAHPV SCYTGVCLSW VVFAGAHMVL GGQGAALPAQ
61 VWPLVAVSGL GLTVYYYGTL SALRRGNLSA YYPIVRSSPL AIAALSWLAS GQSYSWAALS
121 GMALIILSGL MIQRGNGRLL DDPRAFAMAL MAMLGSAAYS ISDATAMQAT TSAPFLFWTY
181 ALVTLAMTAL RAWEDRGSSA PLLGVVRGWV QNPWRILFAG LSSYLSYLLI LRVFQLGAEA
241 AAVSAVRQVS IPVSVILAAL VLKEPRGLRR LGWAVLIAIG IAMIALQ
SEQDB ID: 3101377BHF
Reference:
3101377
Name: Ser/Thr protein phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFIHLTDIH LMPPGQSVSG SDPIEKLSKV FEDIATWHSD AEFCVVSGDL ADLGDRESYE
61 WLRQRLAHFP VPVFLMLGNH DVRETFISVF PDHPRDANGF IQHAHTAGGA RFLFLDTLTG
121 GPDIHDGELC NDRLAWFAAE LERAGDMPVY VFLHHPPFDI AIPYVDEIKL RQPDAFHAAL
181 QAGRNIRHIF YGHVHRTTYV NWRGYPFTSL PSTNHQVPLI PEREGQEHSA EPLAYGVATI
241 EGDQFTLHVD HYLGKPGA
SEQDB ID: 3101377BHG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVTSEHSTL KGHHGLGVLA LIEAARSRFA QHRVYRQTVN ELSALSGREL ADLGLHRSMI
61 KRVALQAAKE YTAR
SEQDB ID: 3101377BHH
Reference:
3101377
Name: MraZ protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARRFRGESN HKVDSKGRVS IPASFRRVLE AGDPNWQSGG NPELVIVYGD HRRKFLECYT
61 MEAIDEVDAK IDALPRGSME RKMLQRMFHG QSFPTSVDET GRLVLPAKLR TKIALEDEAF
121 FIAAGDTFQI WNPATYDQEE LAAAEEWLDE LPEDFDPMQY LDGAGGS
SEQDB ID: 3101377BHJ
Reference:
3101377
Name: S-adenosyl-methyltransferase, Isotype: MraW, Class: EC2.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mraW
Sequence:
1 MSRTAAPPSD DPHIPVLLRP LLAAVAPVSG IWLDGTFGAG GYTRGLLAAG ADRVIAVDRD
61 PLAFELAAGW AKDYGDRLVM QQGVFSRMDE YASDLDGVVL DLGVSSMQLD LAERGFSFMK
121 DGPLDMRMSQ EGPSAADLVN TATEADLADI LFHYGEERAS RRIARAIVKA RAEAPIETTL
181 QLAALVESCL PRPKPGQSHP ATRSFQALRI AVNAEYDELF EGLMAAERAL KPGGKLAVVT
241 FHSIEDRMVK RFLQARAGRS GRANRYAPET VEDAPQFELL SRKAIGPDDQ ELAENPRARS
301 AKLRVALRTD APAGAVDAKS IGMPQLKGGT R
SEQDB ID: 3101377BHK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSVIYVLTA LAVLGLALWA YQENYRTQEV LKDTQRLQRQ IGEAQVRLSV LRAEWAYLNR
61 PDRLRELADL NFERLGLLPM RADQFGRVSE IMYAEDPALP IINGIDVSNF SDAGTLPPEQ
121 QP
SEQDB ID: 3101377BHL
Reference:
3101377
Name: penicillin-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRTPLRPLA RVLHARAKGE NPDLIERENI RLRHEEMQDR SRARAEGRLL VLGVFFFCAF
61 SVVGARMGML ASSEAQEPLA SATGATIAAQ RADIVDREGR LLATNFETHS LYAQPPLMVD
121 PVAAAEGLVR IFPDLDKDRL VRDFSGKRKF IWIKKRISPE QKQAVHDIGD PGLLFGPREM
181 RLYPNGRLAA HVLGGAGFGR EGVDAAEVIG VAGVEKQFDG YLRDPANGAK PLQLSLDLTV
241 QAAMEQVLDG GMKIMSAKGA SAVLMDVHTG EVVAASSLPS FDPNDRPRPP TSGFDPSDSP
301 LFNRYVQGVY ELGSVFKIFA AAQAVDLGLV NSDTIIDTSG PMRIGKFPIG EFNNKNYGKI
361 SIADVIVHSS NRGTGRLALQ IGAERQQAFL NSLGMFDPTP FEIVEASGGQ PLKPKTWGEL
421 STVTISYGHG LSTSPMHLAA GYAAIANGGQ YVSPTVLKQK GPQYGPRVMS ENAARQARAM
481 LRKVVTSGTA SFGEVPGYQV GGKTGTADKP KPRGGYYDDK VIATFASLFP ASDPKYVLVV
541 TLDEPSILAY GEKRRTAGWT AVPVAAELIG RVAPLLGLRP QLEPGQGAGY TLTSN
SEQDB ID: 3101377BHM
Reference:
3101377
Name: UDP-MurNAc-Ala-D-Glu-Dpm ligase, Class: EC6.3.2.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murE
Sequence:
1 MGDTRRRLSQ LALTARGGRD PDISGLAVDS RLVREGFLFA ALPGSRVHGG DFIQYALRMG
61 ASAILTDAEG ARIAAAELAA SQAALVVVED PRQTLALTAA LWFGAQPATM VAVTGTNGKT
121 SVSTFVRQIW TELGHDAVNL GTTGVEGAWT APLAHTTPEP ITLHRCLAEA VANGVTHAAM
181 EASSHGLEQR RLDGVVLKAA GFTNFTQDHL DYHETFEAYF AAKAGLFRRV LPPDGVAVIN
241 MDDPKGAEMR AIAAARGQNV LTVGRGPCDL SLTNQRFDAT GQDLLFSWRG KAYQARLDLI
301 GGFQAENILL ACGLVIASGG APERVFETLP HLGTVRGRMQ LAATRANGAA VFVDYSHTPD
361 AVATALRALR PHVMGRLVAI VGAGGDRDPY KRPLMGKAAV ENADIVIITD DNPRSEDPAL
421 IRAAVMQGAP GATEVGDRAE AILRGVDTLE PGDALLICGK GHETGQVVGD QVLPFDDVEQ
481 ASIAVAALEG RLA
SEQDB ID: 3101377BHN
Reference:
3101377
Name: UDP-MurNAc-3-peptide-D-Ala-D-Ala ligase, Class: EC6.3.2.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murF
Sequence:
1 MTLWTAAEAA EATGGRALGD WQVSGISIDT RTIAPGDLFV ALTAARDGHD FVAQALDKGA
61 GAALVSRIPE GVGEDGRLLL VDDVQTGLEA LGRAGRARAQ ARVVAVTGSV GKTSTKEMLA
121 AMLGAQGRTH ASVASYNNHW GVPLTLARMP RDTEFAVIEI GMNHPGEIAP LARQARPHVA
181 MVTTVAAVHL EAFDDVAGIA REKAAIMEGL EPGGVAVLNA DIAEADILRA AARGARQLSF
241 GRAAQDYRLT GVEVADGMTH ARADTPAGPV SFTLQSAGTH FAMNALGALA CCDALGADAG
301 QSLQGLERWT PYKGRGARET ISLAGGPVTL FDDSYNANPT SVGAALEVLA GTPGTRRVAF
361 LGDMKELGPE ELPLHAGLAA LPAMERVDQV HCIGPLMRAL FDALPEAKRG RWTETGAEML
421 AELPALVAPG DAVLVKGSLS MGLARLVDGL REMGHGAGSK QSET
SEQDB ID: 3101377BHP
Reference:
3101377
Name: phospho-MurNAc-5-peptide transferase, Class: EC2.7.8.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mraY
Sequence:
1 MLYWLTALSD GGDVWNLFRY ITFRAGGAFM TALIFGFLFG RPLINVLRRK QGKGQPIRDD
61 GPEGHFSKAG TPTMGGLLIV GALLTSTLLW ARWDNPFVWM VLFVTLAYAL IGFADDYAKV
121 SKQNTKGVSG KMRLALGVII AVIAALWASY NHPAELQNQL ALPVFKDTLI NLGLLYVPFA
181 ICVIVGSANA VNLTDGLDGL AIMPAMIAAS TLGVIAYAVG RVDFTEYLDV HYVPGTGEIL
241 IFTAALFGAG LGFLWYNAPP AAVFMGDTGS LALGGALGAI AVATKHELVL AIVGGLFVVE
301 ALSVIIQVLY FKRTGKRVFL MAPIHHHYEK KGWAEPTIVI RFWIISLILA MIGLATLKVR
SEQDB ID: 3101377BHQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSNFKKSLG EIVSIEAWYT GFSEEDQQSD LFLHVRFQEA VFGGDPSQSV RFKLRLKKAD
61 IVVIAEAPIN VPRSRVRRDR LNMEAKLTEV RKTELEGSVE GSVEANVKPT GVSGGAQFKA
121 TGKAAGAVEK NSTREIRHSG TLVEHSVDSE GNNRWSFNPA EGPNLFGQAF NATEPVMLMR
181 IDGKPPKIPP TVKVRVHCLR EDIDVLELEA KNISKSLLNR GIGEEKKLKL AEEIIKDYLS
241 REGLEFEDVS EKFAKLVVAD VIAHDE
SEQDB ID: 3101377BHR
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMSSPMMSD TDREDLDAIL RTVLVSDKGY VETLSRATGL NGKALTDKAA FTLSRLSAVG
61 GYDYENEALE VAGRYLAEAR FTEAEAIYRQ VLVSFPEKHG FNHPGYATRL NNLAEVLRAT
121 ARYDEAESLY RQALEIDREA LGLEHPDYGI DLLNLAGLLH DRGRYEAAEP LYREAMTIIG
181 KVVGEEHYRY ATAQNNLAGL LQDMLRFEEA EALCRQALEI TSKTLGESHS VYATRLNNLA
241 ELLGTTERYG EAEPLYRQAL EITQKTLGEE HPDFAIRLNN LAVLLKATGR YEEAEPLYRQ
301 ALEITHRTLG EAHPDYATRL NNFAGLLDST ERYDEAEPLY RQALEICEKA LGVEHPSTQT
361 VRANLELFLS EKPD
SEQDB ID: 3101377BHT
Reference:
3101377
Name: UDP-MurNAc-Ala-D-Glu ligase, Class: EC6.3.2.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murD
Sequence:
1 MIPVKGFAGA NVAVLGLGRS GLATARALRA GGAEALCWDD NPAAREAAEG EGFTIRDLRK
61 QGVRDDTACL IVSPGIPHLY PAPNPVVAAA LEAGVPVDND IGLFFRSFAG PEWDGFDTLP
121 RVVAVTGSNG KSTTSALIHH ILSEAGRPVQ LAGNIGRGVL DIEPGEEGSV VVLELSSYQT
181 DLARALTPDV AVFTNLSPDH LDRHGGMGGY FAAKRRLFAE GGPDRAVIGV DESEGLYLAG
241 QMSEGPGDDR VIRVSVSRKL TGPGWQVFAR KGYLSEYRKG RQAGSIDLRD IRGLPGAHNH
301 QNACAAYAAC RALGLSPKAI EAGMRSYPGL PHRSQIVAEA GGVTYVNDSK ATNVDAALKA
361 LGAFKRIRWI CGGLQKEGGI AALNGGLAEV LKAYVIGREA AGFALQLEVE SEVCTTMDEA
421 VARAMAEAEP GDTVLLAPAA ASFDQYDNFE RRGEDFMAEV QKRLDG
SEQDB ID: 3101377BHU
Reference:
3101377
Name: ORF TIGR00275
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNRARYGTP GQMQLNTIIL GAGAAGMMCA AHAGPGTLVL DHARAPGEKI RISGGGRCNF
61 TNMYAEPENF LSQNPHFCKS ALARYTQWDF IDLMNRHHIA WHEKTLGQLF CNGSAKQVIS
121 MLLSEMERAG ATLWLSTTLK DLSHADGRFS LTVEREGRTE HLSARNLVLA TGGKSIPKMG
181 ATGLAYDIAR QFGLGVTETR AGLVPFTFPE SRFAPLAGLS LPARLSNARA TFDEALLFTH
241 RGLSGPAVLQ LSSYWREGEE IAIDLAPDQD LFAALRDQRQ AAGRRDLTTE LARHLPARLV
301 EFLAPQLGLK GRLADQSDSA LRALAETLRD WRLTPSGTEG YRTAEVTLGG IDTDMLDSRT
361 LRSKSQPGLY AIGEAVDVTG WLGGYNFQWA WSSGHAAGTA IAKTQR
SEQDB ID: 3101377BHV
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRYSTGVILV ATAAMLWSLM GLAIREIEVA GTWAILFWRS AAMVPALLAF FVWRKRKPIL
61 PALRATGRAG LMAGFGLVVA FAGAIFAIQS TTVANAVFLF AASPFLAAAL SWVVLRETVR
121 RATWAAIAIA LIGLVVMVRE GLALGALAGN LAALASAMGF ALFTLSLRWG RLGDMMPAVA
181 IGGMLSMMVA LGMLGLTGEP LLVPARDIAI AMAMGAGLLA VGMALYTMGS QVVPAAELTL
241 ITMIESMLAP VWVWLLLGEE ASAGTLWGGA IILGAVALNA LSGMRRKPVM PPMA
SEQDB ID: 3101377BHW
Reference:
3101377
Name: transcriptional regulator family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALKITRNKA APLPGRCPLS ECMKLLGGAW TPNVIWYLSG GARRFNELRV DIPGISAKML
61 TTRLRELEHK GVVQREVRPT SPPSVEYSLT DLGQDLVPAI LAIVDVGHRL KNRDQCSATS
SEQDB ID: 3101377BHX
Reference:
3101377
Name: glutathione S-transferase, Class: EC2.5.1.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gst
Sequence:
1 MKLYYKPGAC SLASHIALIE AGESFELEQV DTAAGTTASG GDFRAINPKG YVPALVLDGG
61 ETVTEGAAIL QLIAERNPDA GLVPQGGGLG RTRVQEQLNF VASELHKAFG PFFSGKPLEG
121 EARDAAVERV NGRMQLVEAM LADGRDYLNG AQFSVADAYL FVVTNWANFL GLSLDGVPNL
181 KALVARVAER PSTRAAMQAE GLLG
SEQDB ID: 3101377BHY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSMTTEEASF AAVQAVIGTY FDGLHHADSA RLRQVFHPQA IYACATGGDW LYRDMETYFA
61 VVDQRVSPAS KGEARRDRIQ SIDFAGPDTA RAVVNCAIGD SYFTDFLTFV RQDGRWQILA
121 KVFHSEPL
SEQDB ID: 3101377BJ
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDLSHRDRA RGRFLADGVD PVTPAPAITV AGSASIDGAR LFAPLTLTLE AAQWTCLLGG
61 SGVGKSTVLR LIAGLETGAE FSGAITASDD APVLKRVAYM AQDDLLLPWA TVAQNVGLGA
121 RLRGEQVDRA RLDDLLRRVR LTAHAAKRPA ELSGGQRQRV ALARTLMEDK PVVLLDEPFS
181 ALDARTRADM QELAAELLAG RTVLLVTHDP AEAARLGHSI QVMTAAGLTP VAPPTAQIPR
241 AVDDAATLEC QAALLRMLRE GVQ
SEQDB ID: 3101377BJA
Reference:
3101377
Name: 4-oxalocrotonate tautomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPYVNIKITR EGATPAQKAE LIAGVTDLLK QVLNKNPETT FVVIDEVEME HWGIAGLPVA
61 EYRQRKAG
SEQDB ID: 3101377BJB
Reference:
3101377
Name: cell division protein, Isotype: FtsW
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHQIRRKPGT KTPNRGANEA ASGSGVMTEM VYGAVPERGG EPILPKWWRT LDKWSMSCVL
61 ILFGIGLLLG LAASPPLAAR NGFDPFHYVQ RQAFFGGLAI VAMLLTSMMS PVLVRRLAVL
121 GFLGAFVALA LLPIFGTDFG KGAVRWYSLG FASVQPSEFL KPGFMVVAAW LFAASQEING
181 PPGRLWSFAL CVAIVLMLVM QPDFGQACLV LFGWGVMYFV AGAPMLLLMA MAGVVVLGGM
241 VAYSSSEHFA RRIDGFLNPD VDPTTQLGYA TNAIREGGLF GVGVGEGQVK WSLPDAHTDF
301 IIAVAAEEYG LVLVLIIIAL YASIVVRSLL RLMRERDMFL RLAGTGLACT FGVQAMINMG
361 VAVRLLPAKG MTLPFVSYGG SSLIAGGIAV GMLLCFTRTR PQGELGDLLR GRG
SEQDB ID: 3101377BJC
Reference:
3101377
Name: UDP-GlcNAc-MurNAc-5-peptide pyrophosphoryl-undecaprenol transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRKYLMIAA GGTGGHMFPA QALAEAMLRK GWRVRLSTDA RGARYTGGFP HTTEISQVSS
61 ATFARGGILA KAMVAPRIAA GIAATAWEMR RDRPDVVVGF GGYPSIPALG AATLLRLPRM
121 IHEQNGVLGR VNQLFARRVA CVACGVWPTD LPEGAQGVHV GNPVRAAVLE RAGAAYIPPG
181 PYPMSILVMG GSQGARILSD VVPGAIAALP EELRQYIRVA HQARDEDGAR VTEFYAAHGI
241 DAEVQPFFHD VPRRMSEAQL VISRAGASSV ADISVIGRPS ILIPFAAATG DHQTANARAL
301 TGANAAILIP ERALDSAALA EQIAAVLTHP DAALQMANAA LSTGAPDATE RLVGLVEQLA
361 EKETP
SEQDB ID: 3101377BJD
Reference:
3101377
Name: UDP-MurNAc-Ala ligase, Class: EC6.3.2.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murC
Sequence:
1 MTPATKLPQD VGPIHFVGIG GIGMSGIAEV LLNLGYRVQG SDLKGSKITE RLAGLGAEIF
61 EGQRAENLDG AAVVVISSAI KPGNPELDGA RAQGLPVVRR ADMLAELMRL KSNIAIAGTH
121 GKTTTTTMMA ELMVAGGFDP TVINGGIIHA YSSNARMGQG EWMVVEADES DGSFNRLPAT
181 VAIVTNIDPE HMEHWGSIEA LRQGFYDFVS NIPFYGIAVC CTDHAEVQAL VGRITDRRVR
241 TYGFNAQADV RATNLTYKGG VAHFDILLQH EDMVIEGCTL PMPGDHNVSN ALSAVAVARH
301 LGMKADEIRA ALAAFGGVNR RFTKVGEVNG VTIIDDYGHH PVEIAAVLKA ARQASEGRVI
361 AVHQPHRYSR LSNLFDDFCA CFNEADVVAI AEVYAAGEAP IPGADRDALV AGLIRHGHRH
421 ARAILSEEDL ERLVREQTRP GDMVVCLGAG TISAWANGLP DRLKG
SEQDB ID: 3101377BJE
Reference:
3101377
Name: AA permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHRRGIMAA PLKRRIGLGL LTAYGVGVMV GAGIYVLVGA VAGDAGVWAP VAFLLAGLIA
61 APTALSYAEF STRLPEAAGE AAYVGTGLNS QSLALLVGLA VVVAGTVSAG AVLRGGVGYL
121 SAVTEINPVW AMIGLGGALT LVAVAGVLES LALAAVFTVV ELAGLALVVW AGLGADPSPD
181 WVAPAPPVWT GIGLGGVLAF FAFIGFEDIV NMAEEVEAPE RTLPRAILIS LVVTSVLYAL
241 VAWAAVRAVP LDVLGQSESP LALVWQYGRG SGAGFLSAIA VFAALNGILA QIVMATRVLY
301 GLGGRTKALA LFHTAHPRFG TPVLATFLVG AAVIFCALYV PVETLAETTS SILLAVFALV
361 NGALIVQKRR APEARFRVPM AVPVLGLVLS LAALSVAVRG IL
SEQDB ID: 3101377BJF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLSLILAAL WAVIANVLAM LPSRDHHWRR AYVLIALGIP LVGFVTYENG PWIGLVVLAA
61 GMSVLRWPVI YLGRWLRRPR A
SEQDB ID: 3101377BJG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDLGIGGGG VSDELLIYVI PTLLGLGAAL LGRWMARKGG WRRVLSLAMI ASGALAGLML
61 YADSLDDPWA AIGVAALAAL GVGPVILGLV LGGFVGWVGW RRGG
SEQDB ID: 3101377BJH
Reference:
3101377
Name: UDP-N-acetylenolpyruvoylglucosamine reductase, Class: EC1.1.1.158
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murB
Sequence:
1 MIDTSAIRGK LTPNRDLSEL TWLRVGGPAD WLFQPADIDD LQTFLRMLPA DIAVFPMGVG
61 SNLIVRDGGL RAVVIRLGRG FNAIDVAGDT VTAGAAALDA HVARKAADAG VDLTFLRTIP
121 GSIGGAVRMN AGCYGSYTAD VFRSAQVVLR SGELATLGAA ELNFRYRQSD LPEGAVLVSA
181 SLQGVPGDPE ALHARMQAQL DKRDQTQPTK ERSAGSTFRN PAGFSSTGRA DDTHELKAWK
241 VIDEAGMRGA RLGGAQMSEM HSNFLINTGG ATAADLEGLG EEVRKKVYDT SGITLEWEIM
301 RVGDPLDG
SEQDB ID: 3101377BJJ
Reference:
3101377
Name: D-Ala-D-Ala ligase, Class: EC6.3.2.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ddlB
Sequence:
1 MGMSSRTNPK VAVLMGGPSA EREVSLVSGR ECAAALRGEG FEVVELDAGS DLCDRLRASA
61 PDVVFNALHG RWGEDGCVQG LLEWLRIPYT SSGVLASALA MDKERSKEAY RAAGLPVAAS
121 QLADRAAIEA AHVMQPPYVV KPYNEGSSVG VYIVTEAANG PPVLAPDLPA TLMVEEYVPG
181 RELSTTVLGD RALNVTDIIT DGWYDYHAKY SPGGSRHVIP ADLPPEIFEL CLDYALRAHK
241 ALGCRGLSRT DFRWDESRGA AGLFLLETNT QPGMTPTSLA PEQALAAGMS FGQLCAWMVE
301 DASCDR
SEQDB ID: 3101377BJK
Reference:
3101377
Name: cell division protein, Isotype: ftsQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSLSRILLP VRFRPQLPAG QDAAFDSGAG QVPPLAEAMR LDGLARLKPA PKRSDPAPSR
61 LSYRVQRWML TPGIRLGLRI GVPFCLIFAL GSGFLASEKR RDALNAFVAD IRASIQDRPE
121 FMVNLMAIDG AGTHLAADIR EVAPIDFPIS SFDLDVEQIR QVIAGLDPVK SATVRIRPGG
181 VLQVDVIERQ PAVVWRTRAG VEMLDETGAH VDDLPERGAR PDLPLIAGEG ADAHVAEALR
241 LIQAARPMGD RLRGLVRVGE RRWDLVLDRG QTIQLPAKRP VPALERVLAV NEVQELLDRD
301 VAVVDMRLGT RPTIRMTEAA SAEWLRVRNT GGNGQ
SEQDB ID: 3101377BJL
Reference:
3101377
Name: cell division protein, Isotype: FtsA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ftsA
Sequence:
1 MMTDLYQSQR AMRQMRQQAI QRGVVAILDV GSSKISCLIL RFDGSGRLSE DSAIGSMAGQ
61 TGFRVIGAAT TRSRGVQFGE ITAMQETERA IRTALQAAQK MADIRVDHVI ACFSGANPRS
121 YGLDAKVELE TQVVTESEIG RVLNACEVPE YGAGREVLHA QPVNFALDNR SGLIDPRGQL
181 GQSLAVDMHM LTVDATAIRN LAHCIKRCDL ELAGVANSAY VSGVSALVED EQELGAACID
241 MGGGTTSISI FLKKHMIFAD CVRMGGDHVT GDISMGLGVP TANAERIKTF SGGVHATGAD
301 DREMIDVGGD TGDWEHDRRT VSRAELIGIM RPRVEEILEE VRARLDAAGF EHLPSQQIVL
361 TGGGSQIMGL DGLASRILGQ RVRLGRPLRV HGLPQSATGP GFSSAVGLSL FAAHPQDEWW
421 DFEVPVDRYP ARSLRRAVKW FRDNW
SEQDB ID: 3101377BJM
Reference:
3101377
Name: cell division protein, Isotype: FtsZ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ftsZ
Sequence:
1 MTLNLSMPGQ DELKPRITVF GVGGAGGNAV NNMIEKQLEG VDFVVANTDA QALQQSHAPS
61 RIQLGVKVTE GLGAGARATV GAAAAEESIE QIVDHLAGAH MCFITAGMGG GTGTGAAPII
121 AQAARELGVL TVGVVTKPFQ FEGAKRMRQA EDGVDALQKV VDTLIIIPNQ NLFRLANEKT
181 TFTEAFSMAD DVLYQGVKGV TDLMVRPGLI NLDFADVRAV MDEMGKAMMG TGEAAGEDRA
241 VQAAEKAIAN PLLDEISLNG AKGVLINITG GHDLTLFELD EAANIIREKV DPDANIIVGS
301 TLDTSMEGAM RVSVVATGID AVDVQHDMPV PRRPMNAPLK QRVAAEEKPA PLTLEQPAAP
361 QPVAEAAEEP SLFEGMDVEQ VAAHDLGEDI LDTGDEPELL DDDGLPPPAY QPQVPAFEPR
421 AYVEEEEAPV ETFVAPRAPA PGTPSPEAMR RLQAAAQKAP SAPQQGHRAL QQPVGDKPRF
481 GFNRLIDRMT GHAPDTPADR GPAVARKQPV MRPSDATAPA HAEADPDQER IEIPAFLRRQ
541 AN
SEQDB ID: 3101377BJN
Reference:
3101377
Name: UDP-3-0-acyl GlcNAc deacetylase, Class: EC3.5.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpxC
Sequence:
1 MQHTLKTSVT FQGIGLHGGK PVRMTLRPAA AGHGIWFKRT DIEIGDAMIP AIYDLVDRTP
61 LCTRLVNAAG VSVSTVEHIM AALAGCGVHN ALIELDGPEV PIMDGSSVEF VRGIMARGVR
121 QQAAPVLAYE VLKAVTVEKD GARATLMPSD GLEIEFTIDF EDAAIGRQTR RMNMRNGSFA
181 RELSDSRTFC RRSDVEAMRA NGLALGGTLE NAVVVDGDEI LTPGGLRHTD EAVRHKMLDA
241 LGDLYMAGGP ILGCYVGDKA GHALTNALLR TLFETPGAVR PVLCTPEQAA RLPGQGLIWS
301 EIPQVA
SEQDB ID: 3101377BJP
Reference:
3101377
Name: competence lipoprotein, Isotype: ComL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGSRAGARL VGALLLATFL AACGGGGFRT AADRSQNLDG YTPEQIFERG EYELSAKRTE
61 DAAYYFSEVE RLYPYSNWAK RALIMQAFAY HSGKDYPESR AAAQRYIDFY PADEDAAYAQ
121 YLLALSYYDQ IDEVGRDQGL TFQALQALRT VIEVYPDSEY ATSAILKFDL AFDHLAAKEM
181 EIGRYYLRRQ HFSAAINRFR VVVEDFQTTT HTAEALHRLV EAYLSLGLEA EAQTAGAILG
241 HNYQSSEWYE ASYKLLTARG LKMRDVGNNW LSQIYRQSIK GQWL
SEQDB ID: 3101377BJQ
Reference:
3101377
Name: DNA repair protein, Isotype: RecN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recN
Sequence:
1 MLRALEIRDM LIIDRLELNF RPGLNVLTGE TGAGKSILLD SLGFVLGWRG RAELVRQGAE
61 QGEVMAEFDL APGHPAHAVL ADAGLPGGDT LLMRRVNTAD GRKTAWVNDR RCSGEVLRAL
121 SETLIELHGQ HDDRGLLNPR GHRAMLDTYA GLSAELEAVR AAWTAQARAR KTVAATEAAL
181 EAVRAEEEFL RHAVGELDAL DPQPGEEGEL DARRRLMQGA ERIRDDVARA FALIGNEGAE
241 GAMSDAIRWL DGVVDKAEGR LEAAVSALGR ALIELGEAQS GVEDCLDALQ FNPAELEQIE
301 ERLFAIRALA RKHGVAPDEL GGFAETLRGK LAALDAGDAD LAAQRAALAK AEAAYEAAAA
361 ALSQARRASA GELDAAVMHE LAPLKMERAV FQTRITEGEP GPEGRDAVAF EVATNPGAPA
421 GPLNRIASGG ELSRFLLALK VCLRGDDGGK TMIFDEIDRG VGGATADAVG RRLEALAGAG
481 QVLVVTHSPQ VAARGVHHWR VQKRVEAGMT LSTVVALSDP EREDEIARML SGDTVTEAAR
541 AAARALLDA
SEQDB ID: 3101377BJR
Reference:
3101377
Name: voltage-gated Cl channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSLRLRAVL VRTKDLRECV MTQSTRTVLV QQFLQAKAEI GDAWQVLRHR GPSQVQFWFI
61 ALAIGVAAGV AAVAFRKGIN ALQSVLYGNE DVRLLHSHAE HLPWFWLLLI PTLGGLVVGL
121 ILHKTTPDGR VRSVADVIEG AALTDGRVEM RAGIGSMLAS LITLSSGGST GREGPVVHLA
181 GVISTWVCRR INADGITGRD LLGCAVAAAV SASFNAPIAG ALFALEVVLR HFAVHAFAPI
241 VIASVAGTVI NRLDRGDVTE FALNTPGALQ FYVELPAFLL LGLVCGLVSL LLMRSIFLAE
301 DLGTHVQNSL RMPRWLRPAV SGALLGLLAI WFPHIIGVGY ETTILALSGE LALGTAILFA
361 VIKTVALALT MGGRMGGGVF SPSLMIGALT GLAFGLIATR VLPDVSGTHA LYAFAGMGAV
421 AAAVLGAPIS TTLIVFELTG DWQIGLAVMV SVSMSTALAS RLVDRSFFLT QLERRDVHLA
481 AGPQAYLLAM LRAGAVMRPL GDPRCLDRAG CEALIAEGVC VPASATLEAA MPWFDRDEHP
541 CIPVVVREED GRETPVGALY HIDALKAYNR ALAATAAEEH S
SEQDB ID: 3101377BJT
Reference:
3101377
Name: MlrC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKVLIAGLAT ETNSFSPIPT GRLAFEDSFV SRTATREPAN LFSAPQHEWR AMAEARGWEV
61 VESLSAFAQP AGPTIRSTYE GFRDEILADI EAAKPDILLL SMHGAMIAEG YDDCEGDMLV
121 RARAILGPSA VIGLEIDPHN HLTEDMLGAA DLIVSYKEYP HTDGHLRARE LFTLAADTAA
181 GKIRPVMRDY DCRMITMFHT TRAPMRGFVD EMQARENTGG ILSLSLTHGF PWGDCERVGA
241 RMLAIADGDA ELAETVAREF GEKLWSLRDQ LRGDWPSIPG AIDHAVAANK TPVVLADFAD
301 NAGGGAPADS TFVLREILGR GLRDAAIGIF WDPVVVRMCQ DAGVGAQMQV RLGGKIGAMS
361 GDPLDLKVTV RGLREKMTQK MGEGQMPMGN GVWLETEGVH IVVSDRRTQA FHPMCFTDLG
421 IDLSDMRMVV VKSSQHFYAG FAPIASEVVY ISGPGAITPD YANIPYTKRD SNYWPKVEDP
481 FA
SEQDB ID: 3101377BJU
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: periplasmic oligopeptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNSSRRGAL RSAVGAMVIG LGLTFSGSAT QAETVLKAVP HSDLKILDPI WTTAYITRNH
61 GYMVYDTLFS LDAQGNIQPQ MVDTVTTSED GLMVTMTLRD GLVWHDGAPV TAADCVASIN
121 RWGSKDAMGQ KMMSFVESLE ATDDKTITFK LSTPTGLVTL ALAKPSSNVP FMMPERVAST
181 PSSEQIADYT GSGPFVFRQD LWEPGTKIVY EKFDGYVPRS EPASGLSGGK IAKVDVVEWL
241 PIRDHQQAVN ALKAGEIDFI EAPPHDLLPL LKDDPNITLD DFNPAGNQFT FRFNVLHPPF
301 DNPKMRQALL YAFNQEDFVQ AVVGNEEYYE LCLALFGCGL PFESTAAMDG LLESNFAKAR
361 ELIAESGYNG EPILLMHSTD LAVLTNLAPV AKDLMEAVGL NVDMQSMDWQ TLVARRSKRD
421 APADGGWNAF ITSWTTGDLF NPVAAAFLNS SCDTALFGWP CDTRIEELRD AFARATSVEE
481 QKKIVDEVQA AWFDYPTHIH LGQWTSRAAM TNNVSGLLQT GAAVFWNLEK N
SEQDB ID: 3101377BJV
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVSYLLRRVL ATIPVMLLVA VFIFLLLRLT PGDPATIIAG DYANDEQVAQ IRENLGLDKP
61 VVTQFFVWLG NIAQGDFGES FFYKKDVSEL IAARLEPTLS LSLLTIVLTV SIAVPLGTLA
121 AYRQGSWVDR GIMGFSVLGF SLPVFVIGYA LIYLFSIQLG WLPVQGYQRI GEGMGGWLYR
181 LILPSCALSV VFVAFIARMT RTSVLEVLGE DYVRTARAKG QTETRVLVRH ALRNAAVPIV
241 TVIGLSFAVL IGGVVVTESV FTIPGLGLLT VEAVLARDFP TIQAVILLFS FIYVLINLII
301 DVSYTLLDPR IRY
SEQDB ID: 3101377BJW
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTTAISPAG QTVRRMFRNS SVIVGGVLVL VITLMALLAP ALGTRDPSAI SPKDRNQPPG
61 FEATVRDRET GQKVTVEYKL GTDTLGRDVY SRIIYGARIS LVVGLAVAAI AIVIGMAIGV
121 LAGYIRWLDG IIMRVMDGLM AIPAILLAIA VVSLFSAGLL SVIIAIVVPE VPRVVRLVRS
181 IVLSIREEPY VEAAITAGTR TPTLLVRHVL PNTIAPLIVQ GTFIVASAII VEAILSFLGI
241 GIPPEIPTWG NIMAEGRTVF QLYPHNILYP GVILAITVLG VNMLGDGLRD TLDPRFAKRV
SEQDB ID: 3101377BJX
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNGYRVEPM VDHKYALEVD GLTVSLPTNA DRPNAVENIS FTVAPGEIVC VVGESGSGKS
61 VTASAVMGLL PDALRPIAGR TLLEGEDTLA ADKNRLRDLR GTRMAMIFQE PMTALNPVTR
121 VGEQIAEVLE IHTTMSAAER RQRAIEVMES VHLPDPERMV DSFPHQLSGG QRQRIMIAMA
181 LVLDPILLIA DEPTTALDVT TQAQILKLIK EMQERRGTGV LFITHDFGVV AEIADRIVVM
241 QNGRIVEYGD RDEVLQRPKA PYTQMLMRSV PSMTPPDRSA KTDKTAVEVT ALNKVYGRTG
301 WLSKDRIVHA VQDVDLQVRK GETLGIVGES GSGKSTVARC IARLIDPTSG SIGLHGAEIA
361 HLTQGQLHPY RRKVQIVFQD PYRSLNPRRT IGQSLIEAPM NYGMTRDQAL TVARDLMELV
421 GLSGDALDRY PHQFSGGQRQ RICIARALAV EPDILIADEA VSALDVSVQA QVLKLLDDIR
481 VKYNLAMLFI THDLRVAAQI CDRLIVMQKG VVVEHGPTRQ VYQDPQHAYT RLLLEAAPGQ
541 GMRFGSQIQP TVAQGS
SEQDB ID: 3101377BJY
Reference:
3101377
Name: hippurate hydrolase, Class: EC3.5.1.32
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKILPAIEQS RSELETIFKD LHAHPEIGFT ETRTAAIVAE KLRAYGVDEV HEGIARTGVV
61 ALIRGKGDGN RRIGLRADMD ALPIHEETGL AYASTRPGIM HACGHDGHTT MLLGAAKHLA
121 ETRDFSGTAV LIFQPAEEGL GGARGMLADG LFDRFPCDEV YGMHNWPNGT PGKFRIVKGA
181 AMAGASFFDI HIKGKGSHGA MPQDSRDPLI VASALVGQIQ TIVSRNIPPL DACVVSVTQI
241 HSGSAYNVVP DTATLAGTIR YFKDEVCALA EQRMQELCDG LAAAYGVEIR LELRNIFNVL
301 ENDADLSDAY MEAACDIVGA ENVIERKEPV TGSEDFADML RAVPGAYCTL SHAGNVPVHN
361 PGYVLDPEIL PVGASILARI VERRLSPAA
SEQDB ID: 3101377BK
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGRAAQDAA GGCAMTRWLP AVAATLFALA IWQAVVSLTD LPRFILPGPV LVAETWWQSR
61 WLIAEHTAVT ALEVLIGLAC GAVLGVATAL QLASSRIARV LVQPMLVFTQ ALPVFALAPI
121 LTLWLGYGLW SKVAMAVLII YFPITAAFFD GLMRTPVGYL DLARTMQASP RAVLWHIRVP
181 AALPQLASGL RLAAVYAPIG AVIGEWVGAS KGLGYLMLLA NGRAKTDLMF AAMLTLGVLS
241 VLLHLAMRRA TRRMAGER
SEQDB ID: 3101377BKA
Reference:
3101377
Name: peptidase, Isotype: M20/M25/M40 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPYLDLPFDA DAMLAGLKPW IECESPTFDA AAVNRMMSLA AYDLSQMGVV ERIPGRMGFG
61 DSLRVRLPHP RAGEPGILIA GHMDTVHPIG TLAKLPFRRE GDLCYGPGIQ DMKGGNYCAL
121 EALRQIAAAG LHTPLPVTVL FTPDEEVGTP STRELIESEA RRNRYVLVPE PALPNGGVVI
181 GRYAIARFNL RTTGRPSHAG ARLAEGRSAI AAMARRILDI EAMTGADCTF SVGVIHAGQW
241 VNCVSSSCEA EALSMAKRQE DLDDGIARML ALAGEADDVL FEVTRGVTRP VWQPNQPGTM
301 QMYDLAREIA GEMGVELPCD SAGGGSDGNF TGALGIATLD SLGVRGKGLH TLTEHIEVAS
361 LPERARLMAG LLLRLE
SEQDB ID: 3101377BKB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGREGHMWI IAILCIGTLL VWYSNKRRGQ RFVRAVHFLD LLDSGANTDE ANGKVARLFT
61 KHSTSETDVA AIEYAMDKAN RMTDGKQLLW IDEARQRGFA IDSGDTRFDM AHLSQAQAQT
121 NRPQDFAADF SEGQSTTAPG GSFPHAPSGL ADAYHAGLEK IEANKDALRS ALQAIIFTGA
181 RWGVRGAMAG FVFGLIVPRL GVLSYYEIWA VPIVVAFFAA MAGVALGSVY GLLRWVFTG
SEQDB ID: 3101377BKC
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKTLRTPEH VYLCQRLRQA RLDAGLTQAD LAERLDKPQS FVAKVETRER RLDVIEFAKW
61 MAACEGLDVV SEIVATIAEG RAQA
SEQDB ID: 3101377BKD
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLSAYLSPS RHGIFYFRWP LPHSGREKRS TVKVSLRTRC PHRAADLARC LAAHGRIVRD
61 SNALAGLRQT EIREKVQAYF KAQLDQYLDW LDQRGLSKNA LTDAREEMLD HESLLELETT
121 SPMWLPISRF KRVMDVSDEQ WDASQPRITY QLRKGRRDML RRVLEAAEGL ERYSYDDAPA
181 IAPAALEALP AAPSVTLEQA IADYMDEHAH RWDEKYTDQI QAFLNILIEY CGADRQLATI
241 TKQDAQEIKK VVRALPQNRH VKPELKSLSL CEVIQVAGHP KISITTVNNH ISNFIRFFKW
301 AKNNDYTPHA LFEGMKMAKA KASETNRKPF SPAQTQLMYR ELTENTSGLV RKDSHRWGAL
361 LGMFTGARLN EICQLLVSDI QQDQGIHFLN IDDEGDERKR VKTRASKRKV PIHPELIHLG
421 FLDFVESRAQ HDRLFFDFEY NRNGGYGRSL SRWFNENTFL PKLGIKSREL VFHSFRHTMV
481 TRLSQAGEAE PLVKCIVGHE RSGVTQEVYF REGYTLVQLK AAIDKFKIA
SEQDB ID: 3101377BKE
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVRLTDLAV KKLPLSENGQ VTYWDELTPN FGIRCSTRSK SYIVLLGEKR RRKTLGRYPD
61 LSLADARKQA KQLLSANAMG EGQVTPHAPV VAFEEAKARF LKDCEGRNKP RTVADYRRLL
121 NRHFNFKGDV REVYRQQVMR VVSGLSATPS EQSHAYVAIR TMMNWCVRHG LVDHSVVPPM
181 KQKTSERDRV LSEDELRKVY LRAQETPFAF GPIVQLLILT GQRRTEIGQM RRSWISHGEV
241 AFPKGFAKNK REHRFPLSPL SQQVVADLPN TGDLLFPAAT DFEKAFTTWA WHKKRFDEGL
301 EAVEPYTLHD LRRTFATIHA KIGTPIHVTE KLLNHVSGTI SGVAAVYNRH SYADEMRHAA
361 SQFDTYLTEL ALTPT
SEQDB ID: 3101377BKF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHIPDIDFRL AVALYAALLS TFVFIRSVYR RAKFVYDFDS HSSAKRLTLT AYSQSSQEVF
61 VHKIIVVGDL VKEVDIFEFL KPFEVKVWSF DENVVNVNNV MDVKVVAAGR TRKAGRAE
SEQDB ID: 3101377BKG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHRMNPLSDK RRYRLSDRLS GTLPAKFEGL LDRRFYPYFD YLLDSQHSPE EQSDFYEVYV
61 NNPEIEEKLR RRVSSPTTHI TALTGARGIG KSTTLRYFFG VSTQPKLKSL KEIFPGQTGR
121 GVKTVIVPFY LDTYGVPEGG KLSDAKIRSI LTSQIQAAAE LIYRTYNVEV SDEELFDFIN
181 THKSQLVTFP ELGLKPTPRA RIERFRSADV YAYTTELLKF GLHNSDIERV ILIVDDIESC
241 SFESQKNIVK GIMRLRDCLK NFGDLPRTYV PDYIFTCRPA TFNLLKSHPE VDGYSIGHSI
301 NFNKPASIAE VVSRRFDYAK KVLGEGRAPN AMGTLGNVKN LETWREAYRA FEAIINSVAS
361 VNEAFIANLC NHDLRRALID LQGALRNSRW YERETHSQGA FKITEDKYNF STAGIIRAFV
421 LRENEYYSEE VDTVLPNLFF NHERDEIDLM VLHILKFCFE QTRSKRITAI PLSRISDALK
481 IPYRVEVVKN HFDEVLDYMI STEIVRQEMV KMPGDRTRMR YIIPMNKGFA LWRACRSTSV
541 FLEFFRDNTF MFHNSVGTFQ KGRTIGTSRL DSEHKFIFTA EFISEVAGSE SKIYRFINKY
601 RDMQKYREVF GTRFISRPLL WGFRDSLRRH YGLARYNSDL PTDVKIALSR AERDVSRVKR
SEQDB ID: 3101377BKH
Reference:
3101377
Name: site-specific recombinase, Isotype: resolvase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPCFGYIRV STERQGDGAS LEAQKDAITG FASQNNLEIV RWFEERETAS KTGRPIFGEM
61 MNALVSGAAE GLILHKVDRT ARNFSDWSRL HEVAKLGIDV YFAADSLDFG TRGGQLLADI
121 QMALAADYSR NLSQEVKKGI YGRIKNGVYP FRAPLGYLDT GGGNVKAIDP IKAPLVSQVF
181 ELYCSGDYSI TSLTEEMQRR GLKGVGERPV VRRNIESILR NPFYCGKMLV RGKLYDGAHE
241 PLISTAQYRR VAAIKAQRFV KKSTKHELLF RGLFTCGACG QVLTGERQKA HVYYRCHTPR
301 CGRGAIREDR LEETLREKLA RLEISPEDQV TLESDIRAWL NKDGVKDIEK SLRLRISDAT
361 ARLDRLTDLL VDGAIDKPAY ELRKQNVEFE KQQLREELDA LERSRAEEKD LKALLALAAD
421 LSSLYDAAPP PKKRELIRNC LVAPCVMDGQ LVSHPADWLV SLRKSPKTDE KSHSAPQAIL
481 EGVRVMHAVV DVMP
SEQDB ID: 3101377BKJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLGPWRHRR RMGSGHRSFP KHQWRQAMTL MLHAGASPLD YDGLRQLETP EATSTHVPIP
61 HHRLVDVVRL TLGFYGHTVE EEHHGVTPDG MRYFGVLSLR STYGDYTDTV GLRNSHDKTF
121 PIGISFGSRV FVCDNLAFIA DHVVRRKHTA QAKRDLPGLV GDLIEPLADQ REAQHRVISR
181 YRAANLSQSL VDHAVLELYR AEVITVTRIA AVMERWENPP HDWGVKTAWR LFNCVTHALE
241 GRIAEQPALT SRLHDVIDAT CLNGNATVSA ELAAQ
SEQDB ID: 3101377BKK
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHFHPDHVTT LGQAHYRYGD FPFGIRLADR LMHLYIIGQT GTGKSTLLAN LARQDAKNGI
61 GFCLVDPHGD LAAGLVEMLD TPGIYWNVAD PVSPYGYNPL TRVGTDHRPL VASGFIESLK
121 KQWKDAWGAR MEHLLRYAVL ALLEQPSADI RDIVRLFVEK DFRRSVVARV TDPQVFAFWT
181 KEYPNMNYQT AVDGVAPIAN KLGAFLANPT LRRAICEPEE PLRFRRIMDD GQCLIVNLAK
241 GRLGSDNANV MGGLIVSSVL NAAFTRHTVP EHERRPFFLY IDEFHSFTTS VFAGMLAEAR
301 KYGLGLVLAH QHIVQTDREV FEAVIGNAGS LVVFRVGAQD APTFHRQLGT VEIPDLVNLP
361 NYRAFIQLMV RGERVGTFSA TMDPPLQ
SEQDB ID: 3101377BKL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARVIPTCAP EKEVIMGILQ DDDVGDIGAV PVCKSCGSER VALDAWACWN PDSGLWELEN
61 VFDDAHCHAC EGETTMVWKR LDGAAPRQAI RELNDRFRRE GLGNGSVMVT SGVQAIGAEF
121 VLKAVQTVRT FDQFSEDNDP WGEHDFGAVE VDGERVFWKV DCYDPTLTQG SENPANEAVT
181 HRVLTIMLAG EY
SEQDB ID: 3101377BKM
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRSIALFSF FMALVTTQGC SEDISNSETH NSASPMSNSQ SGKFSLSNNG KVGCTIEFNG
61 EIELGETDRM MAFFKSLADD NPFDASFFNG AGFSNPSRYS EMKTEYGFEF FWEDGELTLL
121 NQSGLSICLN SSGGSFSEAV QMYDAIKGLG LGTVVPERAR CLSACAVVFL GGRMKHWTTM
181 GGNLVTQKRR SLHATAELGV HAPSIEFELD ELDEALPPEV LSELITSSYS AAVNENAQLI
241 SRLSDNELPI LRRILATSPE TMYLFNTVER TLEVEMEILG IRVPKSVVAN HVKSSCENAA
301 LAFIGIASNY EQLGHPRNVG PWHWQCEKPS LDTYSVKSAR VLETARTNSG LIAGIMDMPS
361 IECWEPGHRN YCIAVYSEIL NEESPPALEG YGVSVGFWFQ ENGRPTSLAD FVESSQAESE
421 DTAAPFFVWD GGSELLYSPS TQLRKVSE
SEQDB ID: 3101377BKN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTEFALDLS LARRKAGFVQ SDIAHLMASH QSRVSELEHG GKLPTLTEIV TLSLIYGRSF
61 ESLFSMIMAD ARQDLQKRVG TLPKDVRNFV GTFNRSASIE RLRDRLAAEE TEHGGP
SEQDB ID: 3101377BKP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGLRMLSVA AASGRVGYVY LVGGSLMDWR TSSKAAESPS AAAEQTQKWI NRLKPEVVVT
61 EKPEAAAKKG EKTKEIIGAI ARTAEHNYVL DVSVKREHDF ANKYEEAEAL AERYPEIEAW
121 LPKRRRFFDN EPRNTVLFEA LSLADAVMRG GPTALGRAMG
SEQDB ID: 3101377BKQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAAISHHTV RKGLLLKTTY YEVHLSVAFT HEEKQIIRQR GLLKTKLLDR RPANAKNDAR
61 DDKFELRVGH LMDERTDRFL CATPSQAKIY EENLLDVLGQ MKVWLDDNAE TGTRTVVEF
SEQDB ID: 3101377BKR
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRGPVEEFG GLFLVFAIVG TLLMITVFVT PIAIAGIVAY VGYRLYTESP ARLERIARQE
61 TETLYNHALA GTVQLSDAEI DAALGQHWPV DLPASLRIQL LDVGRAIFEQ EGLMPDVPPP
121 PALCNTVEGA RYRDMLARAG QARSDRVMVM TALEIVSAAL APIANAVPPI EGDVLVEVTQ
181 FTHPLGQAVQ NVIAPFFRDN DYMHFKALRQ RLDANLTATH RTNPVFPVDY KGDDIVDTYL
241 RGTYLKELFS LKTPFTIPED RRFEHTHIVA GSGHGKTQTL QYFIAKDLEA VSRGDKSVVV
301 IDSQGDLLST ILMAKTLPPD RIVLIDPEDI QFPVSLNLFS VGQDRLENYD PLERERLTNS
361 IIELYDFVLG SLLSAGMTAK QSVVFRYVTR LMFHIPDATI HTLRELLEPD GTDTYRKHIE
421 KLEGTPRRFF ETEFDSKEFA NTKTQVLRRL YGVLENQTFE RMFSHPVSKF DMFTEMNAGK
481 LILVNTSKSL LKEQGTEIFG RFFIALIAQA AQERATLPDY DRLPVMVYVD EAQDYFDQNI
541 GIILSQARKY KVGMVMAHQY LGQLTQGLQE AFEANTSIKL AGGVSARDAR ALAGQMSCDP
601 DTIQRQPKGT FATYVRGLTE RAVPISFPFF VLEKMKKRSS EELGAIRDAS RAAYAEPVSG
661 TKSRDQDAPG DDGDGYGPGA EPMSNAQEDD VGDETEYNPS YGTLGGTDPQ NRKPEQSSQN
721 EDDGDQGDIG WDELRKAMGP SFGKPNDKSG LKTAPLDPDD PANPVDKL
SEQDB ID: 3101377BKT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQPATDRLG RATFRHIAPK EDVRPNTREV RWLKHIERHG PQGSHYLYEL TRDTHRCKDT
61 TLRQMQKLRA GGYLSLPHQQ RATERAEFNP YIYDLTQKAE DHLFDLGIDE PTVRPTGHWW
121 HSYMTSCVTS AIDIAALRAG VRFIPAHEIL AIKDVDLAIP IGRAHLIPDQ LFALDYGGRY
181 RAFALEVDRG TEPKTSPAKR KSWKRSIEQY RQIIEKQRYK RHYGLNTNLL VLWVFNSRTK
241 EARFLELMHQ KPCAADRAFL TQSIYDDTGP STERNLPTHL FDRPWKRADG SAVSIRGV
SEQDB ID: 3101377BKU
Reference:
3101377
Name: DNA-binding protein, Isotype: H-NS family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNLNSMSLA ELKSLEKKVA RAIAKFEELE KKQALVALKA QAKKLGFSLS ELTGAVAKPA
61 KQQKPRKKVP PKYANPADKS QTWTGRGRRP VWVVEALEAG RTLDDLEIKS GTPAA
SEQDB ID: 3101377BKV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGFQLFSLP NWLRAKPRQI PEPETHGSDA SSQRTASDFA TNIDRPVIDL YRPHILSGNC
61 LIVTGYQDFL SSLAILMNEV PELRTAEAAS ETRIRIAFGI DTGNAKRLGK PSPVSEEMKL
121 FWLERSGLQV DDDEDLLAVL AQHAISEGNI QLRVFDPGLA QEKLGISGER RLHSKIVSSP
181 KGAVAGSANF SKSGLYRNIE YADGLDTGSH DLQLERTQAA EQVWDVSVDW NTEALEILDK
241 LIKPVTAEDA MARMISEQKG FEPWLTGQRQ SITGHTLFGY QQELTYEACS IAYDHGIAFV
301 EAPTGSGKTE IGCHLAEALS ETFSRVIPKS PVHGVSRKNT AVIAPPKVIP SWERHSTNSL
361 TAIANSKLSK QKLRGAGDHA RSGLRLDQFG VLIIDESHTV TPGFEQASQM AAAIELAPPS
421 WNVCLSATLL GNRDVDWLAH MQEKRASIFM TPDYIQDMGE LFQREMQKPM DIFDHGAPLA
481 VLTEPDTALS REARSELAAL ISPFLTRRQR HCIGESQDRT KHGYPVLANH GRPTSLKVTK
541 RHEQLLEDIV ELCRELAPGG RVTAVEKSRF GHVRTQQSTQ DQLHIRNLLN ILRVNSAQAS
601 WEMSHGVIGK WLREFEGGSR ARKSKSHANQ SDMFSLLGID QPGPTNTCDA LGKKLEAKPF
661 KELDERRYQA CLDIQATKDR VVFLAERTDT LEIFAEALSR KGQHTNFVVG NQTKGEDRAV
721 KAIFGDGPDG FKRIVTGKSV EQFFRPGGRK APKGPASVFM TYKMAEGINL QSADTLVLLG
781 VTSNLKELIQ GLGRIDRIDS QFEIVNYHLV DVPVGQFASD EKIAQRIENY KTLSGEELID
841 AVQEEGSEDA EVILESVVEY LRAPRRLRSN NLHDVLSRTR LAITPARYEL ITKARIEGTW
901 GAELALLSAR ESFTALHLKG TDKPTSFLPP RLIILEHDKD GIQLVRGQVR CARTLNAAYE
961 RTKSLCQENA HMSMDQLTDA LEVVSSQLGE LTEWDLRPAR VESLMKACAE FMNRLDRTGL
1021 DDQQRFGHLS LPAIEMICES WSRLLDPYWE QAKQEVRDSF AYEDLPKGYI ALQEVLTKLE
1081 QDSLRSPKVH DLMSDVIKEA ELLSRDHEYE IGRRVSVVFF SKGSGEH
SEQDB ID: 3101377BKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVYHDMSDD QFEQVAVALG QRLFGPGLIG FAKGKDGGRD AKFRGTAQAY PSTASPWNGG
61 TIIQAKHTTG INASFSDKAF FNPETETGIL ADELARIKAL IASGELDNYL VISNRKLTGI
121 TQGKLETYLH KETGLKKDQL GFLGTSQLDD LFKLYPDALK SLDFRPLERP LIVRSDELAE
181 TIEAFGDALG DLEVPETKDL PEPRTPLDKK NRLNNMSDEY AKKLRSLYLP VTRQIDVFLG
241 DPKNDQFLEK YHDATEEFSL KIIEFQGAED TFDSVFNYLL DMLIDRSSVL RGNKRLTRAM
301 LFYMYWTCDI GKNADA
SEQDB ID: 3101377BKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLERLYSNL DHYFTPIEFN SGFNAIVAEI RLPENRSKSS HNLGKSTLAR VIDFCLLGKV
61 DKNHFFKKRE DLFSEFVFFL EVQLFDDNYL TIRRAVDTPT KISFRRSDLD EPDLTSLEDE
121 DWTHANLPLS KAQGLLDGYL NFSDISPWKY REALGYFLRR QSDYDDVFKL QRHLGPDIYW
181 KPVLARVLGL DAELFQKRYT MRNDIDQKEA DLQTFERQSG ASDEQLENAD ALLQLREADV
241 ERMQAELDQF DFAGADTDVT ERLVEDIDRA IAELNERRYT LTYNLSEIRN ALKDDKIRFD
301 PNKAKSLFEE AGILFPDQIV ADFEQLIAFN RAITEERQQY LLEELQEISA ESASIGRELA
361 RLNLQRRSAL AFLRSEDVFA KYKEMSARIS EINAEIRILR KQQEFRTSLQ DKREELRALK
421 SDYSIQQGTA ERHVRSVSLD SQSLLAETRK HFSSIIERVL GRKALLIVRV NSEGNLEFRA
481 DFVDANELST SEGEGTSYRK LMCVAFDLAV LRAHLKGNFP RFVCHDGVFE SLDPRPKQNL
541 LDVIREYSDL GIQTVITLIS SDAPPPEDGK TSAFEPGEVI VELHDDGADG RLFKFESW
SEQDB ID: 3101377BKY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLYRSTKES GHVGDYYGRA RSLPRVVTAN DVFSLRQKLK GHVLIIRSAV ACETCSQVTT
61 VRIGMGQGIR QEHTIQCSKC SEPISFGMNV DYENLGTEVF AIENCSIVPS PAPGTGPVVN
121 VDANFAIPEN MADQDFTFHR LNQMQEMVEA AKAFGPLPTA KFDPNAPRRP YSDFSSEWKQ
181 LKKAASLMAN GHSKLALRRM KEASEEHYSN QPLDSVSDWF IRFTMKLLGR KYQSRFKAVL
241 KEFSEIRENH DVGPLFEHYE ANMVEDRFVR YREIFTDFFS RYEQFSQVIF RAALDLKLSD
301 DLVASSVQFD AVKSFYGDAF EVFAGNVDLL AMMNNVKSGR DYDQFKELTL DKYLKLDNSS
361 KFNPFADNAV FAELCEERDN QLRNASHHKG FRIDGEGRKI TYRAGKGGTG ETQEISYAEY
421 LFRSVNLFLQ ICVLVCIELA VCSGSGIKLP FD
SEQDB ID: 3101377BL
Reference:
3101377
Name: DNA repair protein, Isotype: RadC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: radC
Sequence:
1 MPSYIRDHRK RLRERFMTGG AAALPDYELL ELVLFRSIPR QDVKPLARLL LDTFGDFNRV
61 LTAPVERLAE VKGVGEAVIT DLKILEASAH RMARARVMQR QVISSWDALL DYCHTTMAHR
121 ETEQFRVFYL DRKNVLIADE EQARGTVDHV PVYPREVAKR ALELNASALI LVHNHPSGDP
181 TPSQSDIDMT ARIRSACEAL GLTLHDHLII GKSVELSFRA EGYL
SEQDB ID: 3101377BLA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEAMIWSLIP LKIENTRIQM PVGQGFFHAG WVGFPEAEEK FFYVYDCGAM NKFATARNRE
61 IKKLHAYVGE GARLDLLVIS HMHADHVNGV EALVTDGKLQ VDTIMLPMIE MKERLLSFAT
121 TAHDDPASAE SDFYREFIVD PVAAVSRFDP RNILLVGRGD GGAPGSGSPG DSPLDGGSDL
181 SGEGRGYTWK LVGQGIADFL SPDAGRPQIA KIPDTSALRV FEFRNWQDAW LIAPYVDEEI
241 TAKNDLFISN LASELRIKVA ELEGRLSSTS FVLDLVTNQA DKLQSAYISC HGDLNRTSLC
301 LYSGPVGSVA VDHRCQVQHG PWVSNLGHPR IAWIATGDAK LSKDAKCDAL LEHFKDHLAK
361 VSTLTLPHHG AAADFNQKLL TATKPSFCPV TADAVKNWQH PAASVTRSVA SEGAMLLVVN
421 ADEATLVRED VWTGTP
SEQDB ID: 3101377BLB
Reference:
3101377
Name: protein-L-isoAsp O-methyltransferase, Class: EC2.1.1.77
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcm-1
Sequence:
1 MTDFATRRRM MVDTQVRPSD VTKFPIIQAM LTVPREAFVP DPQRDVAYAD AMIDLGEGRA
61 MLEPRTLAKM LDAAAIGGDE MVLDVGSGLG YSAAVAARMA ELVVAVEEAA ELADEAQTLL
121 MDNGADNAVL HQGPLAQGAA EHGPYDVILI QGGVEQVPET LVEQLKEGGR IVAVFMEGAL
181 GTVRIGRKTA AGLSWRQAFN ATAPVLPGFE RERAFSL
SEQDB ID: 3101377BLC
Reference:
3101377
Name: type I secretion outer membrane protein, Isotype: TolC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRTLTGRLS RMAVLAAGVA VIAIAPRPAV ADNLADALIG AYNTSGLLEQ NRALLRAADE
61 DVAIALSALR PIVNWTARIQ TTYNRSGNAI ASTTATPDTF FAGLELTQLL YDGGAARLGR
121 QAAQETVLAT RQALVQIEQQ VLFRAVTAYL NVLLQEETVG IRQNNVRLLG EELRASQDRF
181 EVGEVTRTDV ALSESRLANA RANLADANGA LTTAHAEYIN AVGRHPGRTT GQPAMPGLPR
241 SEDDAAALAL RNHPSLIGAQ HQVRALDLVV GQQRANLGPN VRFQAELGFT DDFGGTTFND
301 SASASVIYSQ PLYAGGRLNA SVRRAMAQRD ASRANLLNVQ RNVTQDVSNA YVRFQTANAS
361 LTASAERVRA AQVAFDGIRE EATLGARTTL DVLTAEQDLL DAQLARISAR TERSLAAYQL
421 LASQGLLTAE RLGLAVQIYD PTLYYNMVKD APAAISKRSR DLDRVLEALG KK
SEQDB ID: 3101377BLD
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPAKNVEI EDVLSSIRRL VSEEGRATAR PEAPAAAPKP GKLVLTPALR VAETIEPAEA
61 APLSLAEPVE GTEESAPWTD PDATLFSAAA AAGALPVEAE AEPDDEVSSE AEPIVLAPED
121 LVEEIAEDVD EAEDEPPSEE DADHDTAEPE EAEAEPEPEL EPQPETEEPD WLSEIELEVE
181 AETEKPTEDS LTARIEVLET MISQVDEDWE PDGLSADAYS GTPGDAMAWQ DHDSERLDAA
241 PEPDEDPMDD DHAILSPDEA FLDEESLREL VADIVREELQ GALGERITRN VRKLVRREIH
301 RALTAQELD
SEQDB ID: 3101377BLE
Reference:
3101377
Name: cobyric acid synthase, Isotype: CobQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobQ
Sequence:
1 MVRAIMIQGT GSNVGKSMLV AGLARAFTRR GLRVAPFKPQ NMSNNAAATE NGGEIGRAQA
61 LQARAARRAT HTDMNPILLK PETDTGAQIV VQGKRAGTMR AGDYRKNKAH LLEKALESFD
121 RLCGDADLVL IEGAGSPAET NLRAGDIANM GFACAAGVPV VLVGDIHRGG VIAQIVGTQA
181 VLEPGDLAQI RGFAVNRFKG DITLFDEGRD DIARRTGWPC LGVVPWFNDA WRLPAEDMMD
241 IRSAPGGACK VVVPQLERMA NFDDLDPLAA EPGVSVEIIP AGRPLPGDAD LVLLPGSKST
301 VGDLAYFRAQ GWDIDLYAHV RRGGHVLGLC GGYQMLGHSI DDPEGIEGRP GRTEGLGLLD
361 VHTVMTGDKQ VTLRHATALP GREPVTGYEI HIGRTDGPDC ARAWLEIDGR PEGAATPDGR
421 IRGSYLHGLF ASDAFRARYL GELGHEALVG YEDGVEQVLE ALADHVEAHL DLDLLLSLAE
481 PPRRR
SEQDB ID: 3101377BLF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYFLHTTVD APICAPISGG TAPGKTTTPS AASAASHAKF AVHPCKLKVP ESCPIRHKER
61 HAENCKSKNN KEDEMKDFVD GTAFNNEQGN RARKLFAAVV LAALDDAIAD DKKYGNGPEQ
121 IARWARSRDG REVLSCAGID PNERVVRGLM EFVGRGVRTS VALSREESER RNAAQAEAA
SEQDB ID: 3101377BLG
Reference:
3101377
Name: translation elongation factor, Isotype: P
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: efp
Sequence:
1 MPKINGNEIR PGNVLEHNGG LWAAVKVDHV KPGKGGAFAQ VELRNLRNGS KLNERFRSAD
61 KVERVRLEQK DQQFLYESDG MLVFMDAETY EQIELPADLL GERRPFLQDG MTILVEFYES
121 EALNATLPQK VTCKIVETEP VVKGQTAANS FKPAVLDNGV KVMVPPFVGQ DEMIVVNTET
181 MEYSERA
SEQDB ID: 3101377BLH
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQNHEGQDM VQLYAAIWRV SGRRQVMLIV LSLAIAALAA VPLEFQRDIV NLLTEQAVDL
61 QHLFLLGAGM GAAILASLAL KFLTSFLSGT LGEHVIRLIR MRLVTRAAEG GHTLHQGTLT
121 TAVSAEAEEL GKFAGGAFAD PVVQIGTLVS VIGYISSTQP GLGLIALSMI LPQIAIVLLS
181 QRQVNRHVAE RVKLLRAAGN RLSEEDIAAA VSELEQTFDQ IYATRRSMFL WKLSTKFVIS
241 AINGAGTVAV LMLGGWLVLQ GRTDVGTVVA AVTGLSRIQA PTAFLIAFYR QVSANRIKFE
301 LLRDLFADRG
SEQDB ID: 3101377BLJ
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSRRILRLS GADTDSFLQG LVSNDIRKLD QGLVYAALLT PQGKYLADFF LCRDDEGVLL
61 DIAESLADAT LKRLSMYKLR AAVEIGDSGL NLQRGTGPAP AGALPDPRHP TLGWRAYTPA
121 PESDDGSDWD AIRVAHCIPE TGIELTPDSY LLESGFEALN GLDFRKGCYV GQEVTARMKH
181 KTELRKGLAR VAIEGAAEPG TEITADGKPV GVLHTRAGDH AIAYLRFDRA GGEMSAGEAR
241 LRRL
SEQDB ID: 3101377BLK
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAPLSIVIP TLQAESSLPR LLEALIEGLP NGLIREVIVS DGGSQDATRA IAEAAGAQVL
61 NGPPSRGGQL RHGCDAARGD WLLVLHADTL PDPGWAGVVA DHIAAREDAA CFRLAFRARG
121 PGAAWVAGWA NLRTRLFGLP YGDQGLLIRR RDYQTAGGYP DQLLMEDVHL VRALSRAPVL
181 LPHRALTGAE RYLRSGWLRR GARNLWTLMR YFAGTDPEAL ARAYRR
SEQDB ID: 3101377BLL
Reference:
3101377
Name: paraquat-inducible protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDAPQLRQP DIETRVARGW RGLSLVWLVP VVAVAGALAL VWQSYSNRDI PIRIEFADAT
61 GIEVDKTEIR FREVSVGRVS GMRFSEDLSR VIVEAEIHRE LERYLDSDAR FWRVTARVGP
121 GGISGLNTLL SGAYIAADWD AVEGEAARDF VAEAEAPAVP PGTKGLAVVL IAPDSGSVSV
181 GAPILHKGVQ MGKIAAVRYD ALSGSVLLTG FIEAPNDKLI NSATRFWNVS GAGLELGEGG
241 IQLKVDSLAS LLQGGVAFDT AMSGGEALGK RPIFDLYATE DSARDSLLGD SLQATVEVMS
301 SFDGSVRGLK LGSEVVFRGV KVGQVRHLSA EIDESVEGKP DIRMQVIYTI EPGRLGLHDV
361 STPDDTLSLL ATMVARGGVR AQLMPASFFS GGLVVQLQEN PDAPAATLDR EATPFPIMPS
421 LPTPADTLAV ASQNVLDRVA ALPVEELMQR AIETLENVNT ILADGDTRRI PADLRDMLGN
481 VNAVAGSESL RNLPEDLRQA LASVNAVLAH FEEEEGAQKL VAALEELRTA ATGISAASAD
541 LPALVRDIDA LVAKADALPL EQVVTSADQV LQTADTLLRS DDVERVPAAL NAALAQAEQT
601 LVSIREAAGS VNSTLSTFEE KKVAQTLVDA LGDMRTAAAN VETASAELPQ LVADIDRLIA
661 TANALPLADV TASADRVLQS ADAFLRNEDM DKVPGALAGA LEEAQRALEE LRQGGAVENL
721 NRTLQTASTA ADSVALAVQT LPDLAARLDA LADSAEATIG AYGPGSPVNR EVQAAIGDLR
781 ATVRSLNALV QAIRRKPNSL LVGR
SEQDB ID: 3101377BLM
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLFALSLL ALAACAGPEE RYLLPEITGV ETYRTSARTI QVTRMDLPAY VSDSEITLLG
61 EDGVLRPTKT GFWADEPERA LTEMLAAGLD QALNASVAAD PWPFEGLADI QVAVKVHRLS
121 GVPGQALAFS GQYFLTSPAH GHLERARRFS YAVPMSGETI PAFAAAQTEA LRLLVNDIAK
181 SIARG
SEQDB ID: 3101377BLN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHTLGPMSLV IANQLPLILF CFLAGSLGTG WLLLRKPAGH RAWRLADLVW VVLGGVGALV
61 AVLAGLYKAD HSRLDRQIDI AYAATAAFDR DAARFRLRFC DPPFDPDIAV LCEKIEFLSA
121 STASNSELPL FIAVTGEVAP LAGLHLLFAG PGMRDMSDQV EAFAVDEFLV FATLDAPTEA
181 ALEAMRRKVP LIAGDFQILA RAYEDLIAQV GKLKTEWEFL QENAHILLIQ VLALGLVSFA
241 APFRLGKSII ELR
SEQDB ID: 3101377BLP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKEKSRGNR EAKKPKKVKP KILATAGMNK PTVLNTRDKA K
SEQDB ID: 3101377BLQ
Reference:
3101377
Name: DNA topoisomerase IV, Subunit: B, Class: EC5.99.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: parE
Sequence:
1 MPEDLLSGAQ TATYDASSIE VLEGLEPVRK RPGMYIGGTD ERALHHMVAE VLDNSMDEAV
61 AGFANRIEVE LHADYALTVR DNGRGIPVDP HPKFPGKSAL EVILCTLHAG GKFSGKAYQT
121 SGGLHGVGAS VVNALSDSMV VQVARDKLLY EQRFSRGLPL GPIQQIGAAP NRRGTTVTFH
181 ADEEIFGHHR FKPARLFKSI RSKAYLFSGV EIRWKSAIDD GETPTEATFH FPGGLADYLK
241 ETLGKASTYA EQPFAGTVDF TEKFNTPGKV EWAINWTPSR DGFIQSYCNT VPTPEGGTHE
301 AGFWSAILKG IRAYGELISN KKAAQITRDD LLTGGCALVS CFIREPEFVG QTKDRLATVE
361 AQRLVEGAVR DHFDNWLAAD TKSAGAILDF LVLRAEERIR RRQEKETQRK TATKKLRLPG
421 KLVDCSATSR EGTELFIVEG DSAGGSAKMA RDRKTQALLP LRGKILNVLG AASSKLGSNQ
481 EISDLTQALG VGLGTRFNVD DLRYDKIIIM TDADVDGAHI AALLMTFFFT QMRPMIDTGH
541 LYLACPPLYR LTQGAKRVYC LDEAERDEWL AKGLGGKGKI DVSRFKGLGE MDAKDLKDTT
601 MNPETRKLIR VTIDEDEPGE TGDLVERLMG KKPELRFQYI QENARFVEEL DV
SEQDB ID: 3101377BLR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIQPGTNERV HLMGNWQVKL DANKAIEQID QLASRAWRAF QTPSTAVVVE LLNETRYDLR
61 HVCNYRWQGN FMEPTDDLLA GWGRVWGMQS KGLDGCFGAV IYQLWDQGTE TDAFLVIGNL
121 IYWDGAMPHY TAEITTKNYE NEGKPKTLDL LNDGRSSAWS KDYRDTGGVS LDLKVDIWRQ
181 EITSIEENFR IQLTNPS
SEQDB ID: 3101377BLT
Reference:
3101377
Name: alkylhydroperoxidase AhpD family core domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLGAIRVHV RPVQMGQRGQ SGMSWIRTVP FEEATGKLRK LYDRVTGPGG NVDNIMMVHS
61 LRPHSMEGHM ALYKNVLHHT GNAIPKWFLE VLGVWVSALN GCAYCVEHHF AGLTRLLGDR
121 ARSDAIRAAI EAGAPEQAPL EARERAAMAY VRKLTETPAD MVEADVTALR AAGWEDGEIL
181 EINQVCAYFA YANRTVLGLG CSTAGDVLGL SPGNSEDPDD WGHR
SEQDB ID: 3101377BLU
Reference:
3101377
Name: polyphosphate kinase, Isotype: 2, Class: EC2.7.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ppk2
Sequence:
1 METAKPIAPQ KDSKANGVDA TDPVVKVASP QDPAGDAKVE DATAPVAEVE PRTPRNRRLP
61 TPENVRHAFE SGKYPYSRKM SRRPYEAEKA MLQAELLKVQ LWAQETGERF VLLFEGRDAA
121 GKGGTIKRFM EHLNPRQARV VALNKPTWEE KGQWYYQRYV QELPTVGEMV FYDRSWYNRA
181 GVERVMGFCT PNEYLEFMRQ TPDLERMLVR SGIRLYKYWF SVTQEEQQRR FKSRETDPLK
241 QWKLSPIDKA SLDKWDDYTE AKEAMFFYTD TADAPWTIIK SNDKKRARLN CMRHFLSTID
301 YPGKDKHVVG EPDPLIVGRA HHVIQKSEHI LGTALHPDQR ARQD
SEQDB ID: 3101377BLV
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITVHHLAQS RSLRILWLLE ELGLPYEVIR YERDPKTRLA PPELRAIHPL GKSPVIETDG
61 IRLAESGAIV DYLCTRHAPQ MMPPQDSAAW AEHLELMHFA EGSVMTPILL NLYVGLLGEA
121 GAPLHPRIQS ELTSHFRFME DSLRPSGHFV LDGLSAADIL LSFPAGVVAR LGRAGEFPGL
181 AEFAATMAAR PAFQRALAAG GGD
SEQDB ID: 3101377BLW
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSMQTETIDL NGNPFFLRRW GDPALPPLLM LHGFPEYGGA WADLAPHLAH RFHCIAPDQR
61 GYGQSWAPEG VAHYATSHLV ADMAALVGTL GTPLTVLGHD WGAAVAYGLA MFRPELVDRL
121 IIANGVHPVP FQRAMAAGGA QSAASQYMNA LRAPEATEHF AANDYKALTD FFTRHMGGHD
181 WLSPARLAEY KAEWARPGRL DAMLNWYRAS PLVIAAPGQP RTDLPDLPLD RLRVRCPHLL
241 LWGPDDRALL PEATEGLEDF APDLTRITIP GTDHWLCHQA PDRVAAAILD WMPQPETAR
SEQDB ID: 3101377BLX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDPFDRLIP EARAFLAELA ANNSRDWFTA QKARYDTELK RPAELLLDQV AARLGPGTAT
61 KLFRAQRDVR FSKDKTPYNT HLHLLWTTPE GAQWFFGVSP DYVTAGGGRM GFDAATLARY
121 RASLPQQGEG LRAALAALAD QGLRLSEPEL KRPAPPVAPG DALADLARRK SLTAWIDLPP
181 DGEDLPGRIL TAFERLRPMQ SALSQLLEKG A
SEQDB ID: 3101377BLY
Reference:
3101377
Name: MATE efflux family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYRGHARAI AVLGLPLIGG HLAQFAIGLT DTVMLGWYGV EALAAVTLGS SYFFVLFLMG
61 AGFGWAVMPM VAAAAAERDE TSIRRATRMG LWASLIFAML AMPLLIWSQP ILLALGQEPE
121 IATMAAEYLR VAGWGMIPAL TVMVVKSYLA ALERTQVVFW VTVGAVFANA AANYALIFGN
181 WGAPELGITG AAIASICTQM VSLVAVLAYA LWVLPQHTLF RRFWRPDSEM FRRVVRLGVP
241 IALTNLAEVS LFSASAVMMG WLGAVPLAAH GIAIQLAAAT FMVHLGLSNA ATIRAGNAYG
301 RRDREHMARG GKVVIAMSLM MSLVTIALFL TCAEPLISLF MEPDDPNRPE ILAIGVGLLA
361 MAALFQLVDG AQVMALGLLR GVQDTTVPMI MAAVSYWLVG IPASYVLGFV LRWEGIGVWA
421 GLSVGLACAG SLLMTRFWRR SIRLID
SEQDB ID: 3101377BM
Reference:
3101377
Name: OmpA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNWLRAAALA ALSVFPAVPA AAQDITLTSH DGKVEISGNL LGFDGEFYRV ETRFGELTVD
61 GSGVTCDGPA CPNLTDFVAE LALSGSSTMA EVLLPALIEG FALRNRMQTR RETDSEARFS
121 YLLFQAGSDR PQARFTFRVS TTDEGFADLL ADEADLVMAL REIRPDERRR ALELGLGDMT
181 DSNRSRVLAL DAMVPVVAPV NPVRQVSVPQ LAQVFAGEID NWAQLGGPDA PIALHLPAAG
241 SGLAQAVEDR LLLPAGKSLP ETVARHDRSS LLARAVAIDP FAIGIASYSE TGTARALTLT
301 GDCGFSLAAT RRNIKTEDYP LNSPMFLYMP ARRLPKLARE FMAYMRSPAA QIVIRRAGFV
361 DQAPELIPVA VQGNRLANAI AAAGTEVPLT ELQRLVSTLS GMQRLSLSFR FETGSSRPDA
421 QSRTNISQLA QELESGAYDA RQLLFVGFSD GDGAAEGNTR IALKRAEAVR DAVLQTAETL
481 DPARVEVSVD AFGEALPMAC DDSDWGRQVN RRVEVWVK
SEQDB ID: 3101377BMA
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWTGKTGNML GALALTLTDR IRAEVNVSLD AGGETAAALV LLGANPALTV AEIAEALGLT
61 HSGAVRLVDR LCVSGLAERQ SGPDARAVHV RLTSAGARQR RRALLRRQAV LDHALQALSP
121 SEEAAFAQML DKLLRRMLDF PDQGHRFCRL CDEDLCVPHG CPVEERLVEL LERQARETGL
SEQDB ID: 3101377BMB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTSGERRVA GLAMIGSAAC WGSATVMSRD LLVSMTSIQL LLVQLMASVC VLLALAAPRF
61 PWTYRSREMT KGALCGVLEP GLAYVVGLAG LAQTTAGRAS IISASEPVLI VLVAWVLFNQ
121 RPGLRLMAAI AIAVGGLVLV SWSPVVEDRG GAFRGDMMVV LATLFAAGYV VISSRIVGSF
181 PAASLASGQQ MVGLAFAMLV YAGAMAHGDD MGGFGAIPGG TLAYAALSGV VQYALAFWLY
241 LIGLRYLSAG AAGLWLTLIP VFGLAGAWLW LGERPGLLTV LGAIVIVSAV VLGNRGGTE
SEQDB ID: 3101377BMC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAELPDYYF RIRDNGAFVF RVDTENRQRR IEMDHIAVVN IKNGDIKPQG GRTLSPEDLR
61 EIKRWMAERT DLLARRDIDD IHRAVDYLNL TTHWVQSKAS DAQLEEVTDA LLLAMHDLRS
121 VLVRKKADRL MKG
SEQDB ID: 3101377BMD
Reference:
3101377
Name: Asp aminotransferase, Class: EC2.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aspC-2
Sequence:
1 MSFLSATLSR VKPSPTVAMT AKAAELKAGG RDIIGLSAGE PDFDTPQNIK DAATAAIAAG
61 KTKYTAPDGI IELKQAVCAK MQRDHGLSYT PAQVSVGSGG KQTLYNALMA TLNPGDEVII
121 PAPYWVSYPD MVLLGGGTPV VVETALESAF KLTPAQLEAA ITPRTKWFIF NSPSNPTGAG
181 YSRDELKGLT DVLMRHPHVW VMSDDMYEHL AYDGFAFCTP AQVEPGLYER TLTCNGTSKA
241 YAMTGWRIGY AAGPVGLIAA MRKIQSQSTS NPCTISQWAA VEALNGTQEF LAPNNALFKR
301 RRDLVLSMLN AIEGIDCPTP EGAFYVYPSI AGLIGKTTPK GTRIDSDETF CTALLEEADV
361 AVVFGAAFGL SPNFRVSYAA SDAALTEACT RIQRFCASLT
SEQDB ID: 3101377BME
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDETDWYGP EAATFGDRLA AAREASGMTQ AQLARRLGVK KATINGWEDD LSEPRANRLS
61 MLAGLLNVSI VWLITGEGQG GEALNETDET ARDMAALLTE LRSLRADLQA SGQRAARLEK
121 QLRQIMEHSA
SEQDB ID: 3101377BMF
Reference:
3101377
Name: TPR repeat family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSESRETRIK RMRMRSMRRG IKEMDLILSA YADRSIEAMD AGALDLYDAL LHENDQDLYQ
61 WVTGQVSAPD RYRDLIADIS QTFQK
SEQDB ID: 3101377BMG
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANYLEALSL VERLHRLLLD VIKDEFERVG VLEINAVQAL LLFNIGDNEV TAGELKSRGY
61 YQGSNVSYNL KKLVDMGYMH HQRCEIDRRS VRVRLTQRGR EIRDVVAELF MRHAEGLQSR
121 GVLGPDGIEE ITSALKRVER YWTDQIRYIY
SEQDB ID: 3101377BMH
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRLLTLLAL LLPVPGWAGC RQALALGLDV SGSVDGREYR LQLDGLAAAL LAPEVQARLL
61 AMPGHPIRLA VYEWSEPGFQ RLILPWHQID TAADLETVAA TLRTTRRAAA PPGTAIGPAM
121 HHGAALLAQQ PDCWKRTLDL SGDGKHNMGP HPRVVKAALE GSGLTVNALV IGADSTTFTD
181 LRQTQIGELS AYYGAWVILG PDAFVEVALG YEDYQAAMER KLRRELEGLV LSALPTRAAT
241 QLHAPVLPWP VLPQ
SEQDB ID: 3101377BMJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMYRAAAVAC ALEVTAPPVQ AAECRLALAL ALDVSRSVNA REDRLQRQGL AAALRAPEVV
61 RAAFSTPQPV ALAAYEWSGP NDQHLLLDWV LLRTPTDLET AAARLGASRR ATTEAPTAMG
121 HALTYGAALL GRGPDCLFRT IDLSGDGENN EGFGPRAAYS TPEFDGITVN GLAINGAEYE
181 TEIQLIPYFR SEVLHGPGAF LEVAQGFADF ERAMRRKLER ELSGLVIGEL R
SEQDB ID: 3101377BMK
Reference:
3101377
Name: lactoyl-glutathione lyase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLKYLHVMV RVKDLEKSMA FYELLGLREI RRYDSEEGRF TLVYLAAPGQ DETPLELTYN
61 WDGDDGLPSD SRHFGHLAYG VDDIYATCAM LQENGITINR PPRDGRMAFI RSPDNISIEL
121 LQNGAALDPA EPWVSMDSTG HW
SEQDB ID: 3101377BML
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRPWGKIRR PIAALALLTG LLSSMAGAEA PVKLSPDELR ATAVQALRIG APEQAYSYAQ
61 ALLQRDPADR QALLVHSRAA RTLGRFDEAR SSAQQAWRLS ETDEQKFASS MVMAQALASD
121 ERRTLAQWWL RRAVEHAPSE ELSRIAVRDF RYVRARNPWL TRLSFAITPD SNINNGSSQR
181 SSFLNYKLSE VLYGQPVEYQ LGGSARALSG IEYALGVTTR YRFRELPTRA HDLILSVDLR
241 AYSLSSEAKA IAPTASASDF SFASYTLGYG QRGINLDRRG EYRFFVDVGQ SWYGGNEYAR
301 FARFSLGQSY KLARGRQINA RIATERQWGV TRSDQDTVRA DLSYTLPLSG GTVLWTNLTG
361 AVATSDVAAD EFDEIALRAQ ITFAKPVFGA TAQLGLWARS RDYDVSPHDR NGRQEDKYEA
421 DFTLIFNKID YYGFNPTMRI SASRTESNIA LYDARRFGVN FGIQSAF
SEQDB ID: 3101377BMM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTFARPHQ TIGQNYLTKE QRQAVMKPHL VAVAACVVLT ACGGSDAVFG TGDGSGDGSG
61 GGTGGDTGSP IQGDRTLPPG TTSPTARTGI FRSEPTSTET AYNGNGYARD VSYNAADDTF
121 SVDNLGFDGD NTYSRGTAVG SLGPYSVYEA DAQFLDSFDG EPVNQFRHRA IYGVSTSGNT
181 QFAIVRTGAY VGYGFGGFIY QRNNEVNLPT TGQALFTGSV AGLRDYNGIG ALEYTTGDIR
241 IAIDFDDFND TTGTRGDAVR GEIRNRRIFD LQGNDVTETT LNRINTQNNA TLREIPTATF
301 TVGPGVMDDN GEILGQMTSY FVNNEGQALL FEEGNYYAII SGDQAQEIVG VVVLETSRDP
361 AAPTVRETGG FIVYN
SEQDB ID: 3101377BMN
Reference:
3101377
Name: thymidylate synthase, Class: EC2.1.1.148
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thyX
Sequence:
1 MAVLMRLLAI YSIVATHLAK GTLMPLSSEQ LAEIDAQRAH TAPTRRVVSP GMESHLYRAH
61 PVLDHGFVRV IDYMGDDAAI CQAARVSYGT GTKSVQNDEG LIRYLMRHWH STPFEMCELK
121 LHVKLPVFVA RQWIRHRTAN VNEYSARYSI LDREFYIPAP EHVAAQSAVN NQGRGEALQG
181 EEAARVLEIL KADSARCYDN YEAMIGQEGQ QGLARELARM NLPANIYTQW YWKVDLHNLF
241 HFLRLRADAH AQYEIRVYAE TMCRLVADWV PFAYKAFEDY RLGAVNLSAQ MVDSLRRMLA
301 GEAVTQETSG LSAREWREFQ DVIGR
SEQDB ID: 3101377BMP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRSFLGLCL AVPLAACVQH AGTSGGDTAR LIFFGGANTE RMNIVLPDFP TERCALHRPR
61 PVSADGDREA ALLRTALLSI VTNVLTNAVV EGARKWAQRY QARYAGSANF SNFRIGRTTD
121 DIRCVGIIRM GPESADKTRR DLYSAIVLEL KEIGDGAMFI RPVYSYTPVL KTATSVQANE
181 IGWAGTAITV SVAAVNAEGE LVSHSQSLGL KPAKANVSSH LENVRHTAVP KIYSDGPEAG
241 YDTAIMPYFQ GRPVTLSIAV TEVGAGANDA KALAGAVEAN KGAISTLISG SLQRASD
SEQDB ID: 3101377BMQ
Reference:
3101377
Name: cold shock family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTGTVKWFN ATKGYGFIAP DDGGKDVFVH ISAVERSGLT GLADNQKVSF EMLDGRDGRK
61 MAGDIKPL
SEQDB ID: 3101377BMR
Reference:
3101377
Name: ArsC-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLIYGLKNCD TCRKALKSLP DARLVDVRAD GVDPAVLSRA WAQFGADLLN TRSTTWRGLD
61 AAERAGAPLE LIAQYPALMK RPLIEAGGEF YLGWTPATRQ ALGLG
SEQDB ID: 3101377BMT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNAALVLGI IAGLIGMLVG FFSFGYVEAI EHFGEIDGLA EQLENADLVQ MTSIIAPMLA
61 IAGGAMARAR ALWGGVLLLV SAAGMYHAFG FNVFTMFPIA FAAVGGVLGV AAGKPDEPKA
121 HF
SEQDB ID: 3101377BMU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNPLVSIHNR VFGLVETAGD WLLPLFARFT FAAVLLVYYW NSGLTKLGDG IFGLFSPSIG
61 AYSQIFPKQL EAVGYDVSQL GMFHWAVVMA GTYAEFILPL LIVIGLFTRL AALGMIGFVV
121 VQSLTDVYGH GATDLATLGA WFDNQASGVI MDQRLFWVFT LSLLVIKGAG ALSLDALLRG
181 RTQAAMA
SEQDB ID: 3101377BMV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVSQTQFHT ALLDPASAVP QGLCDAGERP AGRRFDVYRN NVAVSLTEAM HQAFPVITKL
61 LGTQNMDGLA GIFLRRHPPA SPLMMFYGAA FPEFLAGMQQ LSHLGYLPDV ARLELALRHA
121 YHAADSTAID PQALAIDPEA LMAARLEFAP AMRLLRSPWP IHAIWRFNTE DDAPKPEPGG
181 QDVLITRPEY DPIPQLLPPG GADWITALQG GATIGAAYEA AAEQTPEFDL GATLALLLQG
241 GAIISLTEQG QDNEPTRLDP
SEQDB ID: 3101377BMW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQRIGQMLD SSRTDTHLPA MPGVGYKPQH FAEILEAPGP VGWLEIHAEN YMGDGGRPLA
61 QLRHLSERFP ISVHGVGLSI GGEGALDADH LARLKHLVGW LNPASFSEHL AWSTHDSHFL
121 NDLLPLPYTD ATLARICDHI DQVQEVVGRR MLLENPSSYL AFAESSWSEP DFLREIAKRT
181 GCGLLLDVNN VFVSATNLDF SPQGYIDAYP LAHVGEIHLG GHDEDTDDHG RPLLIDSHGR
241 EVVDPVWALL DHVLERSGPK PILIEWDTDV PDWPVLRAEA ARAQQALERI PA
SEQDB ID: 3101377BMX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDMSNTAKT LAIAGAVAAA LAGTATTASA QAKEKCYGVS LAGKNDCAAG PGTTCAGTST
61 VDYQGNAWTL VDAGTCESME LPAQADGSVR KGSLEALERD LPA
SEQDB ID: 3101377BMY
Reference:
3101377
Name: Thr-tRNA synthetase, Class: EC6.1.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thrS
Sequence:
1 MAQISLTFPD GNARSYDAGV TPAQVAADIS TSLAKKAISA TVDGKHWDLQ WPIATDAQIA
61 IHTMADEAQA NELVRHDLAH IMARAVQEIW PATKVTIGPV IENGWYYDFD RAEPFTPEDL
121 GLIEKKMKEI INKREPVTTE VWERTRAIEF YKANNEPYKV ELIEAIPGTE PIRMYWHGHW
181 QDLCRGPHLQ HTGQVPGDAF KLMSIAGAYW RGDSNRPMLQ RIYGVAFTGK EKLKAHLHML
241 EEAAKRDHRK LGREMDLFHM QEEAPGQIFW HPNGWTIYTT LQDYMRRQQR RGGYVEVNTP
301 QVVDRKLWEA SGHWEKYQEN MFIVEVDEEH AREKAVNALK PMNCPCHVQI FNQGLKSYRD
361 LPLRMAEFGS CNRYEPSGAL HGIMRVRGFT QDDGHIFCAE DQIESETAEF IDFLSMIYKD
421 LGFEKFSVKF SDRPDTRAGS DAVWDKAEAA LLSATRAAGI EPELNPGEGA FYGPKLEFVL
481 TDAIGRDWQC GTHQVDFVLP ERLDATYIGA DGAKHRPVML HRATLGSFER FIGILIEEHA
541 GKLPFWLAPR QVVVASITSE ADDYVREVVA ELCAAGVRAE ADTRNEKINY KVREHSVGKV
601 PVILAVGHRE VEERTVSVRR LGEKQTSVQS LADVTIELGR AATPPDLL
SEQDB ID: 3101377BN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPADYLAAIF RSSTRLFNTR KSPAAEQSGM DMSRSWVVSD PAPRSSSDCA EMSRPQLVAV
61 TSASIDKVMV PAVSLSPFG
SEQDB ID: 3101377BNA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMESFPTELG ILTCLMILAA SLWIPYVVGI ATDPSQEEAF ARPAQISNLR PWVQRAHRAH
61 LNLLEQSMPF AVLVLILALM NGFSTLTYWT AIAFFWVRVL HAAGMISGYA RMPLRPILFS
121 AGWVCTLLMA YAIFAAR
SEQDB ID: 3101377BNB
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTLFKALND PARRAILDQL RQKDGQSLSE LESKFDMTRF GVMKHLKLLE EAHLVLTRRE
61 GRFKYHYLNP LPLQDMINRW VAPFLQPQAQ GLAALKEKLE TENRMGKPDF MMQTFIRCTQ
121 DALWAALTET EQMAAYHFLC NEVQGKVSPG ETVEFITPAG GAMLRQVTRR LDPKSRIEMS
181 FEPLFMGPGA ATSEMVYLIE PQGEICKLTI EHYKLAAGQD GIGEGWARLA ASLKSYLETG
241 TALKGAA
SEQDB ID: 3101377BNC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTLTTDRG RSIAYHLSPG DGPCIVFLGG LKSDMEGTKA VHLEAWARGR GHGFLRFDYS
61 GHGESSGIFD EGAIGDWHQD TLAVIDSLTE GPLIVVGSSM GGWQALLLAR ARADRIAGMV
121 TIAAAPDFTE DGWWAGFDAG QKAQLAAEGR VELPSDYMEP YIVTRRMIED GRDHLVLRAP
181 LHLPFPVRFL QGTADTAVSV DTAVRLMQHA TGPDMRLLLV KDADHRFSDE TCLKIIEDAV
241 IDVRGPA
SEQDB ID: 3101377BND
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLGRLLGR ALALLVLVAG LAWWLGPYEQ VDLKARFDPR KFGEGVQVYF ESIESRFADI
61 TPGVEKRVIW APGGYERRTP YALVYLHGFS ATSEEIRPVP DHIAQALGAN LVFTRLQGHG
121 RGDDAMAQGS ASGWMRDTAE ALAAGRAVGE RVIVIATSTG ATLAAAAALD PEMSADVAAM
181 ILVSPNFGVN DPLAFVPTLP GARYWLPRLM GDARDVTGPD ADKNTYWTTR YSWSALVPMS
241 VLVQAVVSLD FAQARVPALF WFSDQDRVVR ADLTRALAGR WGGPVRVEAV TMGPGDDPSS
301 HVIAGDIMSP GQTDIAVAGM LAWLREQGIY
SEQDB ID: 3101377BNE
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQRVSLITI GAEDIEAAAS FYEALGWRRV ETPDGVIAFD LIGQVLGLYP LAALAEDIGL
61 PVGELGQGAM TLSHNCPDRE TVDALLKRAQ TAGAEILKPA SEVFWGGYHG YFRAPDGSIW
121 EIAHNPFSAL GPNGEFRWNG YG
SEQDB ID: 3101377BNF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRPGSMWSL ETLGRVRLSR HFFMRDFLYS EIGSFHEKQN IPDDPDLAIE TGRAFCETLM
61 DPLEETFGRI AVRSGYRSPA LNRFGNENRL NCARNDHPLE CHIWDRGRGE ARIAGASVVI
121 PWFADRYAQG RDWRDLAWWL HDHLEYSEVW FFPKLCAFNL VWRPKPLRRI DSYIAPRGRL
181 VVTGEEPPLP LAERRAAYAD FPAFRGIAYP
SEQDB ID: 3101377BNG
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGEPLVFLPG MCCDARLFAP QLAALSRSHA VTVCPVGQAD QISLIVEDLL PILPARFALA
61 GLSMGGIVAM EMIRRAPDRI SRLCLMSTDA QTDTPQIAAA REPLIISARV GKLEQALGQV
121 LRPESLAPGP GRLQVLEVMR QMGLEAGPDQ FVRQMRALQR RSDQQGTLRR IKVPTLILCG
181 AHDRLTPVKR HAFMADLVAH ARLSVIEEAG HLPTLESPEV VTEALQAWLA EPQR
SEQDB ID: 3101377BNH
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRARATELE FACDCGALAG HLSADAVRAG TRVGCHCPDC RAAELYFGQP DPAPGPVDIF
61 QTSPDGFVID RGAEHLALMR LSPKGLFRWY AKCCNTPLAT TLDSPKKPFV GVNVRRLADP
121 DALGRTRAYG FVPQPDGSRK HRNIAPAVYG LLTRMLAGRL SGRWRKTPFF DTSTGEPVVK
181 PQVLDKERRA ALYR
SEQDB ID: 3101377BNJ
Reference:
3101377
Name: polyhydroxyalkanoate depolymerase, Isotype: intracellular
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaZ
Sequence:
1 MRYMMTYDWM ETVRNTNQWM GATANSMASY PLFSMVPNPV FNWMSAWGEV TERTFQRMVV
61 KPDWGIRTFT CEDGKDHLVE INTVVERDFG DLIHINVTGR ETQPRKVLLV APMSGHYATL
121 LRSTVKSLLV NCEVYVTDWH NARDIPVSAG KFDVEDYTLY LVDFMRELGP DTHVIAVCQP
181 APLTLAATAY LAELDPKAQP STLTLIGGPV DPDATPTEVT DFGRRVTMGQ LEQSMIQRVG
241 FKYKGVGRMV YPGLLQLASF MSMNADRHSK AFTDQIQRVM RDEASDHDAH NRFYDEYLAV
301 MDMTAEFYLS TVERVFKKRE IARNAFIVDG HKVDISKITD VAVMTVEGAN DDISAPGQCI
361 AALDLCTGLA DSKKANHLEP GAGHYGIFAG RSWRDNIRPL VIDFMNTNSR KGKSLRPANK
421 NSAA
SEQDB ID: 3101377BNK
Reference:
3101377
Name: poly(3-hydroxyalkanoate) polymerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaC
Sequence:
1 MTTSEDMPTH LTGEQFEQLK ENMTKVEELS KRLVEIMAGK KPHTPALDAP NQELFAKAAT
61 AYWAEAWQNP AKLLEQQLEF WGKSVLNFAE AQQALISGGA EGDEDAPKDR RFSNPMWDNN
121 PYFRFIKQQY QTNAAALAQA VASVDDLPDK DRKRLKYFSQ QIIDMMAPTN FLATNPDALE
181 RAVETEGRSL LKGLENLITD LEANNGELVV KLADEKAFHV GGNIATTPGD VVYRNRMMEL
241 IQYKPATDTV HEIPIVLFPP WINKFYILDL KAQNSFIKWV TEQGFTIFVV SWINPDASYA
301 DVGMEDYIQD GFLTAIDEVK KICKVKQVNA VGYCIAGTTL SLTLSLMKQT GDKSVKSATF
361 FTALTDFSDQ GEFTPFLQDD FIDGIEEEVT REGVLRSWIM ARTFSYLRSN DLIYKPAIQS
421 YMLGETPPAF DLLYWNGDGA NLPAKMAVQY LRGLCQRNEF AGEGFDLMGH TLHVRDVDVP
481 VMAITCETDH IAAWKDCYRG VQKMGSRSKT FVVSESGHIA GIVNPPSKKK YGHYTNPDLK
541 DDAATWLAEA DFNEGSWWPM WAAWLKPRAG KQIPARDPGD SQHPSLCPAP GTYVVAKAST
SEQDB ID: 3101377BNL
Reference:
3101377
Name: phasin, Isotype: PhaP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaP
Sequence:
1 MAKTQDFTAI MKDMMGAFPV DTKAMEDAFK STAALNEKLS GVALEAAEKS AEISSKWTKE
61 TLAKLSDMSK AKAEPADYAK AMTDFASASA EVAAENMAAF AEVAKKVQMD TVELLMAAGK
121 DITEDATAAV KKATNDVTAA AKKAAAAK
SEQDB ID: 3101377BNM
Reference:
3101377
Name: polyhydroxyalkanoate synthesis repressor, Isotype: PhaR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEQEKPLLI KRYASRRLYN TETSDYVTLE DIAGFIRAGR EVQIVDLKTG DDLTRQYLLQ
61 IIAEHESRGE NVLPVNVLND LVRSYMVPGG GMMPQFLQSS FDMLRESQSK LMENMNAMNP
121 MAQMPGFEAL KAQQEAFIRA MTGGLGSTWS GPGKEGEGDK GEQGEDLDDI KKQLAELQRK
181 LSKLS
SEQDB ID: 3101377BNN
Reference:
3101377
Name: aminotransferase, Isotype: DegT/DnrJ/EryC1/StrS-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIQDLLGSV TQLFYNSQRL NSGIPNMTLP PNVHDAEPIP ATAREAIDAL MQSGDLFRYT
61 APQDAPVALL EAEFANLLGS KYALAVSSCS AALFLSLKAL GLPRDARVLI PGFTFAAVPS
121 SVVHADCVPV LCEVGANYRI DMADFEAKLS DVQAVIISHM RGHTSDMDAI MALCDARGIP
181 VVEDAAHSLG TTWHGRNIGT IGRVGCFSFQ SYKMINAGEG GILVTDDADL VARAVIMSGA
241 YEHNWKKHKG PEGQNSPELA EAFARWQNKL PLYNLRMSNL SAAVIRPQIP ELARRVRDGL
301 VNHDYVADRL NTSPFIDVPA PLAPEQRAPD SIQFNLVGLD EAEIRAFAAA ADRRGVKVQV
361 FGLSEDNARA FWNWQFLGEV PELPQTRAML MRACDVRLPV RLSRAELDVV ADILLAAMTE
421 VTGPARAYGT
SEQDB ID: 3101377BNP
Reference:
3101377
Name: oxidoreductase, Isotype: aldo/keto reductase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFLDTDILP LGMGCWPIGG AMFAGDQPLG YTNVDDDESI RTIHAALDAG ITLFDTAPAY
61 GAGHAERILS RALKGRPEAI IATKFGTGII EESKQLTENE DDPASVLPAI DRSLARLGRD
121 RIDVLILHLN SLSVPKAEAL FEEVEKACAA GKVRSYGWST DFSESAVAFA DRPAFVAVEH
181 AMNVLLDAPR MRRALHDKDL VALIRSPLAM GLLGGNYGAG DAMRKDDIRA TSNPRTDYFA
241 NGQVNPTFLA KLDAIRALLT TDGRTLAQGA LGWIWAQEGA NIPIPGARTA KQIEGLAGAL
301 AFGALPDDVV VQVEALVERE PDDTPDRAR
SEQDB ID: 3101377BNQ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNETNFDWDD LRLFLAVARE GGLAAAAAST GKSAPTLGRR MLNLERRLGS DLFQRMARGY
61 ALTEDGQHLL AKAARLESLV LPITAIDPEQ AIPVVKVSAG SWVTHLLCAN VSEIIGSDRI
121 RLRFIASDDV ADIGRREALI GIRNHRPEGS GLAGRRITRV RFAVYARNRK VNTWARVIAT
181 TPSAKWVREE ARTADAIEVT SPRNALDLAL AGTARVVLPT FIGSQFDTLK QVSPLIGDLE
241 HEQWLVTHHE DRFVPQVRKV IDRIYLILKQ AKTSS
SEQDB ID: 3101377BNR
Reference:
3101377
Name: Gln synthetase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADWTDNLPE AAQAYLENRR LDEVECIISD LPGIARGKAV PASKFARQDY FHLPDSIFYQ
61 TITGDWGDAA GEEGFIERDM ILRPDYSTAT AAPWTGDWTL QVIHDAYDRD GDPIPFSPRN
121 VLRRVVSLYH AQGWKPVVAP EMEFFLVARN LDPAKEIEPM MGRSGRPAAA RQAYSMTAVD
181 EFGPVIDDIY DFAEAQGFEI DGITQEGGAG QLEINLRHGS PVRLADEVFY FKRLIREAAL
241 RHNCFATFMA KPIENEPGSA MHIHHSIVDM ETGENIFSGP QGGETDAFYH FIAGLQNHLP
301 SGLAVMAPYV NSYRRYVKDH AAPINLEWGR DNRTTGIRVP LSGPAARRIE NRLAGMDCNP
361 YLGIAVSLAC GYLGLMEELR PRKQFKGDAY VGEGDIPQVM GDALDLFDEA KALHEVLGPE
421 FARVYSIVKR AEYNEFLQVI SPWEREHLLM NV
SEQDB ID: 3101377BNT
Reference:
3101377
Name: Gln amidotransferase, Isotype: class I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIGILLTGH APDTLVDATG DYDAFFVRLL GPQNFEFETY SVVDGQFPSG ADAADGWLIT
61 GSRHGVYEDH PWIPPLEALI RQIRDQGQPL IGVCFGHQII AQALGGKVEK FQGGWAIGPT
121 EYDMGSERVT VNAWHQDQVV ALPEGAEVLA SNDFCRNAMV AYGDTIWTIQ AHPEYDNDFI
181 GGLIRTRGRG VVPDTVLDDA TARLDSPLDS PAIGKRMADF YKKARA
SEQDB ID: 3101377BNU
Reference:
3101377
Name: Gln synthetase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAKNWLRKN PQVRTIRVAA ADLNGQPRGK RVPGRFADKA IEGGTRFPLS VMNLDIWGED
61 IEDSPLVLAS GDRDGVLQPT ERGFMPMPWL DTPTGLLPIW MFHEDGRPYE GDPRHALNTV
121 VKRYKARGLK PVVAVELEFF LIDDSGRHLQ VPQSPRSGKR RKAGEILSLR ALDQFDHFFT
181 ELYDACEVMD IPADTAISEA GVGQFEINLM HQDDALRAAD DAWLFKMLVK GLARKHGFAA
241 SFMAKPYEDY AGSGMHMHFS VLDEDGNNVF DDGTERGSDT MLHAVRGCLD AMSGSTLIFA
301 PHDNSYARLV PNAHAPTGVA WAYENRTAAI RIPSGSPVAR RIEHRVAGGD VNPYLMIAAV
361 LGAALNGIED GQMPPQPISG NAYKANLAQI PDRWDTAIDA FESDPAVARI FAPELIRNFV
421 MTKRQEFRYF QELTEKEKTE VYLDTV
SEQDB ID: 3101377BNV
Reference:
3101377
Name: fructosyl-AA oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVVVIGAGI VGASIADQLA ARGARVTVID RAGPGAGASG MSFGWINAAA SEDDTYFRFR
61 LAAVARFRAL CDRLDLSDAV TWNGCIWWED AGEAFETHLE AMARWGYDVT LIGADDFARL
121 EPNVANPPER AIWCPSEGAA EPDKVARALL RRAATNGARL ILGREVTGLM RRGERVTGID
181 TDLCPMAADL VVVAAGIRSG ALTGLPMQNK PGLILRTAPI APVISRIIMS SDIHFRQASD
241 GRLYLGEIFS GGIATETLDF ASGLIDELMT RLRNRLPGVE GLQLEQAALG TRPVPADGLP
301 AIGPVPGSEG LYLATMHSGV TLGPLVGELV AREVLEQDSD PLLAPYRPSR LF
SEQDB ID: 3101377BNW
Reference:
3101377
Name: His/Glu/Gln/Arg/opine family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSCIDTIQD YGLRSIGIGE RLLPRSDFTL CEQFTLIGSG MIWNIYFGLL ALVSGYFLAV
61 TLALGKSAAN PWARKPAEWF IFLFRGSPLF IQFFFAYFFF LSLKKSYPMF DLLTSAWAGA
121 LIVLFMNTAA YSAEIFYGAL RAIPKGDVEA ADAYGMSGWP RFRRIIWPTM MRLAWPAYTN
181 EAIFLFHATT LVFFSAFPAW QQRGDALYYA SYFADKTFNP FVPYPILAFY FILLTLAVVG
241 IFGVINTRLN RHLPAERRPK MRFRLNLAR
SEQDB ID: 3101377BNX
Reference:
3101377
Name: ABC transporter, Isotype: HisMQ family, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSYCTDPDT LDTVRWFSCF LTNGVHLSFY MSFIKVLVLL LVTAPVALAV GFAGAMATRA
61 TLPPLRWLGE GYIAIMRGVP DIAFFLFFVI ALDQAFEWTR HQVLCPDWTD PIRQGNDFLV
121 CPDAKMPLGR AAEWVHQTYS FFLAVITFAI VFGAFAANVL RGGMRAVPHA QLETAAAYGM
181 SRRQTFWRIL VPQMWIYALP GLSNLWLILI KATPLLFLLG IEDIVYWARE IGGTKTSQFT
241 DYPHGDWRMW YFLFLLVFYL SFTRISEILL ERLTVRLSHG QATTGGEALR KEATA
SEQDB ID: 3101377BNY
Reference:
3101377
Name: His/Glu/Gln/Arg/opine family ABC transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRRNPSVCR AFFPSPRPHN RNTNDNGSLS MKKLILTTAA LALSAGMAMA DTVRMGTEGA
61 YPPYNFINDA GEVDGFEREL GDELCKRAGL TCEWVKNDWD SIIPNLVSGN YDTIIAGMSI
121 TDERDEVIDF TQNYIPPTAS SYVATSDGAD LSGIVAAQTA TIQAGYIAES GATLVEFATP
181 EETIAAVRNG EADAVFADRD YLVPIVAESG GELMFVGDDV PLGGGVGMGL RESDGELRGK
241 FDAAITSMKE DGTLNTMIKK WFGEDAAVYE
SEQDB ID: 3101377BP
Reference:
3101377
Name: pre-protein translocase, Subunit: SecA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secA
Sequence:
1 MLGLGTLAKK VFGTPNDRKI KATRPVVAQI NALEEEFAKL TDEGLKQKTD ELRKRALDGE
61 SLDALLPEAF ANCREAGKRA LGLRAFDTQL MGGIFLHQGN ISEMKTGEGK TLVATFPAYL
121 NALTGKGVHV VTVNEYLAKR DSEWMGKVFA ALGMTTGVIW SGQPDAEKMA AYESDITYAT
181 NNELGFDYLR DNMKGELSEV YQKQHNFAIV DEVDSILIDE ARTPLIISGP AQDRSDLYVA
241 IDALLPALSD DHFELDEKTR NVTFTDEGNE FLEAQLVARG LLPEGQSLYD PESTTIVHHV
301 NQGLRAHKLF QRDKDYIVRD GEVVLIDEFT GRMMPGRRLS DGLHQAIEAK ENAQIQPENV
361 TLASVTFQNY FRLYDKLSGM TGTALTEAEE FAEIYGLGVV EVPTNRPIAR TDEDDQVYRT
421 AAEKYGAMID ETKKAHEKGQ PVLLGTTSIE KSEMLSQMLT KEGIEHNVLN ARQHEREAQI
481 VAEAGRYGAV TIATNMAGRG TDIQLGGNVE MKVLEALAEN PEADPVELRA AEEARHAEEK
541 QKVLDAGGLY VMASERHESR RIDNQLRGRS GRQGDPGRTV FYLSLEDDLM RIFGSERLDK
601 VLTTLGMKEG EAIIHPWVNK SLERAQAKVE GRNFDMRKNV LKFDDVMNDQ RKVIFNQRRE
661 IMATEDLSDV VADMREQVID DLIDEYMPPK TYADQWDTQG LYAAVIEKLG IDVPVIEWAA
721 EEGVDDDEIR ERLIKASGDY MESKAADFGA ENMRNIEKQV LLQTIDSKWR EHLLKLEHLR
781 SVVGFRGYAQ RDPLNEYKTE SFQLFEGLLD SLRETVTQQL SRVRMLSEEE QRQMMAQMMA
841 QQNQAEQAAV QAEAVAEAKA SGDARPGFVE DDPSTWGNPA RNDLCPCGSG KKFKHCHGRL
901 A
SEQDB ID: 3101377BPA
Reference:
3101377
Name: His/Glu/Gln/Arg/opine family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEAAPVIQI KNLHKSFGQL EVLKGVDITA HRGDVVSLIG SSGSGKSTLL RCCNLLEDSQ
61 QGEILFNGEP VRWTGTGSHR RPADAKQVLR IRTNLSMVFQ QFNLWAHMTI LQNVMEAPIQ
121 VLGRDRAEVE DSARRYLDKV GIGDKCDNYP AQLSGGQQQR AAIARGLCME PQALLFDEPT
181 SALDPELEQE VIKVIRDLAA EGRTMILVTH DMKMAADISS HVIFLHQGLV EEEGTAEDIF
241 AAPKSERLQG FLSVTKAA
SEQDB ID: 3101377BPB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAMLGMYDM PPLRAANDRF WALIRSELGY GPETLDRTRD VWTIWRDPDL VLAQTCGMPY
61 RARLHGHLQL VGTPDYGLPD CPPGHYRSVF VARVDDTRAL PELVGGTFAY NEALSQSGWA
121 APMTHLQADG LAPAALLESG AHAASAAAVA EGRADLAALD ALTWTLLCEH TDLGGRLREV
181 AHTAPTPVLP YITAPGRDRA VIAAAVRTAI ANLDPDDRAA LHLEGLVDIP ASAYLSVPNP
241 PAPSAICPAD
SEQDB ID: 3101377BPC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRDFLTRLT QPQPAPLDDG DARLALTALL VRIARSDNDY AQAERDRIDR IAAARYGLGP
61 FEAAQLRARA EELEAEAPDT VRFTRAIKEA VAYEDRRAVV EALWSVVLAD GERAQEEDAL
121 LRLVANLLGV NDRDSALARQ RAAQR
SEQDB ID: 3101377BPD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKKFLQAFR PPTPAPLPDP DAELALGALL VRVAQADRDY QVEEISLIDR ILARLYGHNA
61 IEAAKVRATC EKLHAAAPET DTFGKLIRET TGLEERLAAL DALWEVVLAD GEQREGELKI
121 LEEARIAMGL SRKDSDSARE RILARAG
SEQDB ID: 3101377BPE
Reference:
3101377
Name: renal dipeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVFDGHNDV LTELVRAGGR AAAGGFLSGL PGQLDLPRAR AGGFGGGFFA LWARSEGATD
61 FSTLGPEYDL PLPEPVPEAQ AWEMIRAQAD TLVALEEAGA VRICTSTAQI ARARDEGLLG
121 AILHLEGAEG IGPDFYELEE LYALGLRSLG PVWSRPNAFG HGVPFRYPSG PDIGPGLTER
181 GRALIARCEE LRILIDLSHL NLAGFREVAA LSKRPLVATH SNAHARVPHA RNLTDEQLRI
241 MAESGGLAGV NFESTFLRPD GRPDDDIPAA WLLAQFDHLL DRLGEEGVAI GSDYDGCTPP
301 AWLNSVDKLP ALIAAMERHG YPAARIERIC WGNWMRVLAE TWGESA
SEQDB ID: 3101377BPF
Reference:
3101377
Name: CTP synthase, Class: EC6.3.4.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrG
Sequence:
1 MARFIFITGG VVSSLGKGLA SAALGALLQA RGFSVRLRKL DPYLNVDPGT MSPFEHGEVF
61 VTDDGAETDL DLGHYERFTG VAARKTDSVS SGRIYSNVLE KERRGDYLGK TIQVIPHVTN
121 EIKDFISIGE DEVDFMLCEI GGTVGDIEGL PFFEAIRQFS QDKPRGQCIF MHLTLLPYIK
181 ASGELKTKPT QHSVKELRSI GLAPDILVCR SEGPIPQKER EKLALFCNVR PDSVIAAQDL
241 STIYDAPLAY HREGLDQAVL DAFQISPAPK PDLTKWEDVS DRVHNPEGEV KIAIVGKYVQ
301 LEDAYKSIAE ALTHGGMANR VKVRIEWVDA EIFEKEDPAP HLEGFHAILV PGGFGERGTE
361 GKIKAAQYAR EHQVPYLGIC LGMQMAVIEA ARNVAGIAGA GSEEFDHEAG KKRFEPVVYH
421 LKEWVQGNYK VSRKVDDDKG GTMRLGAYDA VLKEGSRVAE VYGGTAIEER HRHRYEVDIK
481 YREQLEKAGL CFSGMSPDGR LPEIVEWTDH PWFIGVQYHP ELKSKPFDPH PLFADFVRAA
541 KESSRLV
SEQDB ID: 3101377BPG
Reference:
3101377
Name: pre-protein translocase, Subunit: SecG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secG
Sequence:
1 MENVVLIIHL LLALGLIAIV LMQRSEGGGL GMGGGGGGAM TGRAAATALS KVTWVLAVAF
61 ILTSITLTVI AAQKAAGTSV IERLGVPAPA TSEPATPSVP AGSDLLPPSA GDNAPLVPKA
121 D
SEQDB ID: 3101377BPH
Reference:
3101377
Name: nitrile hydratase, Subunit: alpha, Class: EC4.2.1.84
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nthA
Sequence:
1 MPHDHHDHPH SLLPSDPALR VKALETILTR KGLIDPAALD EIIDTYQNRI GPQNGARVVA
61 RAWADPAFKA ALLADAMPLL TELGYYGRQG EHMVVVENTP ETHNMVVCTL CSCYPWPLLG
121 IPPGWYKSDA YRSRAVREPR KVLAEFGVSL PEGTSVRVWD STAEIRYLVL PMRPEGSEGL
181 DEAALAALVT RDSMIGTGLA RVPA
SEQDB ID: 3101377BPJ
Reference:
3101377
Name: nitrile hydratase, Subunit: beta, Class: EC4.2.1.84
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nthB
Sequence:
1 MTRVHDMGGR FGDGVITPEP DGIPQLADWQ ARALALTLAA GSLGQWNIDI SRHARERLSP
61 ADYGRFSYFE KWIAALADLL VEAGVLTEDD LRGRGDTGTH PLAERALKAE AVAAVLARGG
121 PADRPSNVAA RFEVGQMVRT LRPAANRLVD GGHTRLPAYA AGARGRIVLK HGSHVLPDSS
181 AHRLGEAPEP LYAVAFPASE LWADPEAPGD EVVLDLWQSY LEPA
SEQDB ID: 3101377BPK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSECPDIAAP EPVFAEPWHA QVFALTVHLN EAGRFTWAEW VDRFSATLKR HGLSRDLDGG
61 ADYFDAWLET LETLLSEEGT AGPEERARMR AAWEQAYLST PHGQPVRLAD
SEQDB ID: 3101377BPL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALSHKARRR WSLVVLLVAL PLYIVVAVTL TDWLRARFDG LPMLVELVIF IGLGILWILP
61 LKPVFRGVGQ ADPDDKG
SEQDB ID: 3101377BPM
Reference:
3101377
Name: adenylosuccinate synthetase, Class: EC6.3.4.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purA
Sequence:
1 MANVVVVGAQ WGDEGKGKIV DWLSERADVI ARFQGGHNAG HTLVIDGEVY KLHALPSGVV
61 RGGKLSVIGN GVVLDPWHLV KEIATIRDQG VEITPETLMI AENTPLILPF HGELDRAREN
121 QNSVAKIGTT GRGIGPAYED KVGRRVIRVA DLADAATLEL RVDRALVHHN ALRSGLGLDP
181 IDRDALLVSL REIAPQILPF AAPVWKVLNE KRKAGKRILF EGAQGALLDI DFGTYPFVTS
241 SNVIAGQAAT GVGIGPGAID YVLGIVKAYT TRVGEGPFPT ELDDADGERL GTRGHEFGTT
301 TGRKRRCGWF DAALLRQTCA TSGINGIALT KLDVLDGFET LKICVGYDLD GTRLDYLPTA
361 ADQQARCTPI YEEMPGWSES TEGARSWADL PANAIKYVRR VEELIDCPVA MVSTSPERED
421 TILVTDPFAD
SEQDB ID: 3101377BPN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGIFLRWMFA FGLLALTYNP TEINYVRWAY WNYQTHLSVA VFMGLLLTIG YIIYLRATLR
61 SIGPFGMALV LSVIASLLWV LFDFGLLHLD NTTVNVWLGI FALSVVLGIG LSWSHVRRHL
121 AGQSDVDDVD E
SEQDB ID: 3101377BPP
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQNNKVLTV SYGTFSCTLE GFEDSFDTMK AIAEYFRDLA ADDRYFGAEP PQPDAEMLAR
61 IAEREIARQV EARRDDKGIV LRAAAAAPAA LAAVEDAQPV AAEPAPAAPA AVEAPLEAPI
121 AEPVAEAPIT EPVAEAPAPE PSDLTPEPAP EETPVIAEVE AEDAVEAEAE AEAETEAEAE
181 VALEADAEEI AAAAEDEEEA DALLASIASQ FENLPEDEAV DEEDEVLAEI DLLPLAEPVE
241 PAPEVAAEPD SIAAKLQRIR AVVSRNEQAH QAEAAYSEDE HADDVAEEDA APLDQIDSAL
301 AARFAGGMAE AEEALTEEIA VEALAEEALA EEVMEEAAKP EVEAEDEPQP RVAVRVAKIK
361 RTEIEAVEVE AVDEEDAAPM AGSLSPEDED DLLRELAAVE AEYLAERAVG ETAEDDEDED
421 DDIDLLSMDD DEDTSDVDGS LFAEADEDAE DDDQSGRAIA ESALAGGDDD ISRLLAAADE
481 KLDDPDLSST RETYSQMRAA VAATRAERSA GGTLGSHSSE DAYRTDLSEV VRPRRPVASG
541 NTPRARGEDH PAPLKLVAEQ RVDIKRGANS GPIRPRRVAN LVAEAPAAAA SADGSFADFV
601 AETGASGLHE LLEAAASYLS FVEGRDQFSR PQLMNKVRQL DDQEFNREDG LRSFGQLLRE
661 GKLKKTANGQ FTASGQIGFR PDSRAAG
SEQDB ID: 3101377BPQ
Reference:
3101377
Name: thiamine pyrophosphokinase, Class: EC2.7.6.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTAIVEASE PVTLVGGGEL GIGDLELALE RARTLVAADS GALAALAQGR MPDAVIGDMD
61 SLPALHRVRI PEERLHRVPE QDSTDFDKAL RHIAAPLVLG VGFLGARVDH QLATFNAMVR
121 HADRPCALIG ATEVIFHLPP RLELDLVPDD VVSLFPLASV TARSEGLFWP LEGLHMAPDG
181 QIGTSNRATG PVVIEAAGPG LLAMVPRGAL DGVIRWFLSP RCGRWPARAG
SEQDB ID: 3101377BPR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTADRPLLGI FLMLGFCVLA PMGDALAKLL GGTMPTMQLL LVRFAIQAVI LIPLVQATGR
61 PWQLRGRLLR LTALRTLLHI VGIWAMFTAL RYLPLADAIA IAFVMPFIML LLGKYVLGEE
121 VGPRRLGACI VGFAGTLLVI QPSFAEVGLP ALLPLLVAVV FALFMLVTRQ LAKDTDPIAL
181 QAVSGVMACV ALTPVLLIGH AAGVEALTLV TASGTTLWLL LAIGVLGTAA HLLMTWSLRY
241 APSATLAPMQ YLEIPVATAI GWLIFHDLPN GLAALGILIT MAAGLYVILR EQATARSAAT
301 ETSG
SEQDB ID: 3101377BPT
Reference:
3101377
Name: Ser ammonia-lyase, Class: EC4.3.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sdaA
Sequence:
1 MFLSVFDMFK VGIGPSSSHT MGPMVAAARF LDMMRASPFE FHGVKGSLHG SLAFTGVGHA
61 TDRATILGLA GFVPDSYDND KAEAALAAIH ATHTVTPEGL PVLAFDPKRD LVFDYDHTLP
121 GHANGMILMA TDAQGDVILR QVFYSVGGGF VLTEEELAQG KDTNDGPPVP YPFKSAAEML
181 EMAAASGKSI AQMKRANEIA RGCEISFAKG TARLWEVMNN CIERGLATDG ILPGGLNVRR
241 RAKGIHDALV AERGMNLNAP HTINDWMSVY AMAVNEENAA GGQVVTAPTN GAAGTLPAVL
301 RYYLDHVPGA APSHVEDFLL TAAAIGGLVK YNASISGAEA GCQAEVGSAA AMAAAGLCAV
361 MGGTPEQVEN AAEIALEHHL GMTCDPVKGL VQVPCIERNG LAAIKAVSAA SLALRGDGKH
421 FVPLDAVIET MRQTGADMHE KYKETSLGGL AVNVPNC
SEQDB ID: 3101377BPU
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPYRLHYA PDNASLVIRL ALEDMGLPYE TVLVDRASRA QDGAAYRALN PAGLIPVLET
61 PQGPVFETAA ILLWLADTHG RLAPAPADPA RGAILKWLFF ASNTLHADMR MLFYPDKYIA
121 EAQAETLRAG LRPRLRTHLA LLDAVAVEAP DWLSPEAPSV LSWYLACLMR WLALYPLDAD
181 RSWFAAADTP HLHRILAALE TRPATRAAQV AEGLGGTPFT APHHANPPEG SAT
SEQDB ID: 3101377BPV
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRKLHALSG SVALLTIACF WTSTALVELF GTHAQIAQVK IAILYGMALL IPAMATAGAT
61 GAALGKGWRL PVVAAKSGRM KLIAANGLLI LLPSAVFLAI RANAGQFDTL FYAVQALELL
121 AGATNITLLT LNLRAGLALH RRRIARAA
SEQDB ID: 3101377BPW
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQFQQNSAG YLANHMARLF AAGLARRIQP LGLAPAQFMV LLELWHDDGR TQADLTAALD
61 VEQATMANTL KRMERDGLIR REPSEEDRRA RLIHLTDRAR ALEARAKAAA EMQNAQALAG
121 LEEAERTAFT GLMRRVIANM QRG
SEQDB ID: 3101377BPX
Reference:
3101377
Name: ribose 5-phosphate isomerase, Class: EC5.3.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpiA
Sequence:
1 MTGELSPIDK AKFVAAKRAA DLVEDGMRVG LGTGSTAAWL VRCLGDMVRK EGLKMRGVPT
61 STRTAQLARE VGIEVITLDE ARWLDITIDG ADEFDGDLNL IKGGGGALLQ EKIVATASDQ
121 MVVIADLGKE VSRLGAFPLP VEVIPFGWQT TQALLEETLI SMDVLGRTAT LRMNGDTPFV
181 TDEGNHILDL HLQRIGNARQ LALVLNQIPG VVENGLFIDI CDTVVVGHGD GRVEIRDINQ
241 GTVEHDRLDF VESDNLFTDL AD
SEQDB ID: 3101377BPY
Reference:
3101377
Name: glutathione-disulfide reductase, Class: EC1.8.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gor
Sequence:
1 MSFDYDLFVI GGGSGGVRAA RVAAGETGAK VALAEEDRYG GTCVIRGCVP KKLMVFASEY
61 SGMVEDAQAY GWNIQPGAFD WDVFRSKLYT ELDRLEGVYR NILKNNGVET FDMRARLVDA
121 HTVELSDGTR KSAKHILIAT GGRPVKPEIK GAELAITSNE IFHLDKLPER MLIVGGGYIA
181 CEFVGIMNGM GVEVTQYYRG AQILRGFDDE ARGLVSEEMC QNGIKLHLGT NVLEMEREGD
241 RIRVKATNGD EELFDQVMFA TGRVPNADHL GLEGLGVELG RKGQIVVDDY SQTAVPSIYA
301 IGDVTDRVNL TPVAIREGMA FVDTVFRGKP TPVDHALIPT AIFTQPEMGT VGLSEEEAAA
361 QEPVEIYATS FKPMQTAFAG RSQRVLMKLI VSKATRKVLG CHIVAPGAGE MIQLVGIAVK
421 MGATKEDFDR TVAVHPVMAE ELVTLRQPVR SA
SEQDB ID: 3101377BQ
Reference:
3101377
Name: PPIC-type PPIASE domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSLAFALVM ALPVAAETKA EADTVVARVN GEEITLGHMI IARASLPQQY QQLPDDVLFD
61 GILDQLVQQT LLKQQQKGET PKQIVLSLEN EERSLLAGET IEEIMAVATT ETAIQAAYDA
121 QYADGFGGEE YNASHILVPS EDEAKAVKEL LDNGADFAAT AKEKSTGPSG PNGGALGWFG
181 AGAMVPEFEQ AVVALNAGQV SDPVQTQFGW HVIILNDKRK SEAPALDEVR DELAGRIQQD
241 AIEARLAELT KDSEIEKPEL TGVEPAVLRQ LELVRE
SEQDB ID: 3101377BQA
Reference:
3101377
Name: HflK protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGNSGGPWG GGGSSGGGGN RGNNGGQRPP EGDGPQIPEI DELVKKGQEQ LRVLMGGRGG
61 SGNRGGGNGR GTGGGGGPAF TRGTVGLGLV VALGLWGMAS FYTVKPEEQS VELFLGEFSG
121 IGTEGLNFAP WPLVTAEVIP VKVEQTETIG SGGRGSDAGL MLTGDENIVD IDFQVVWNIT
181 DPANFLFNLR DPRQTIQAVS ESAMREIIAQ SELAPILNRD RAVIAERLKD LIQLTLDSYN
241 SGINIVRVNF DGADPPEPVK DAFREVQSAG QERDRLEKQA DAYANTVLAG ARGEAAQVLE
301 EAEGYRARVV NEAQGEASRF LAVLEEYSKA PDVTRKRLYL ERMEQVLGDI DKVILDGEGS
361 GSQGVVPYLP LNELRKSSDK ENN
SEQDB ID: 3101377BQB
Reference:
3101377
Name: HflC protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hflC
Sequence:
1 MRKSTFLLPI VVVLVALGLS SLFIVDEREK ALVLQFGRVI DVKEEPGLAF KIPLIQEVVR
61 YDDRILSREV GPLEVTPLDD RRLVVDAFAR YRIVDVRQFR QAVGAGGIAT AETRLDSILR
121 AKTREILGSV SSNDILSSDR AALMLRIRNG AIFEARDLGL EVIDVRLKRT DLPEANLNAT
181 FARMRAERER EAADEVARGN EAAQRIRAQA DRTVVELVSE ARREAEIVRG EADAQRNGIF
241 AEAFGKDPEF FEFYRSLSAY EKALQGGNSS MVMSPDSEFF NYLKSPSGRS E
SEQDB ID: 3101377BQC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPGHECRQM RQNRNSGIEM RLIYACLTAL TLAAPALAEP AIVLGDTAYD TYGKRVSVSS
61 VVRLATITGD RASMSATRAY LPAGKILLVG RGPLCRKQSL DLWCFAVTQD GLPVYVRADS
121 KGYFKADGYD GFIAVAQRPG AVQTTDGRVL EYSSSERYQL VDHSEDTVTL AVGPENRKPG
181 FDAATTVEIP REDSDFVFVD TDELRSDTSY APIRPLTRGD ALARLGADII GLDLDAQSFR
241 EARDFFERLL VEEKNCSDEI TLEQSAGIEL AAGVGGLLSA IDAKLQITAT YAKSTSYPKG
301 MQMRALRYVQ DLPGEGARFF EIWERLSHED DSCKGVVSAR LTGADDAERG GESGEITTQS
361 ARDMGLGVSE SRKFPSYSCD REYFTALDHL TSADGRLSQA AAELLVTYAM RYQGDGGIKS
421 CRNRGATG
SEQDB ID: 3101377BQD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGLLLLGLG LVLIVEGAVY ALAPGIVERL LDILRSLPLA ARRQTGLLSM VIGLILVWAA
61 YQIGF
SEQDB ID: 3101377BQE
Reference:
3101377
Name: periplasmic Ser protease, Isotype: DO/DeqQ-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTNARLMAL AGLSVLFLLL QTLIAQARPE SLAPLADKVS PAVVNITTST LVEGSTGPQG
61 IVPEGSPFED FFREFQDRNG GGDRPRRSSA LGSGFVISED GYIVTNNHVI AKADEILIEF
121 FPGDGQPARE LPAKVVGTDE NTDIALLKVE ADGPLKYVKF GNSDTARVGD WVMAMGNPLG
181 QGFSVSAGIV SARNRALSGS YDDYIQTDAA INRGNSGGPL FNMDGEVIGV NTAILSPNGG
241 SIGIGFSMAS NVVTKVVGQL REYGETRRGW LGVRIQDVTE DMAEAMGLEK TGGALISDVP
301 EGPAKEAGLK AGDVIVSFDG AEVRDTRDLV RRVGESEVGK SVRVLVFRDG GTQTILVTLG
361 RREDAERAGS GSEEEGEGGQ TTPEASKKEF LGLTVSVLTA EMRAELGLAE DATGLAIVAV
421 DEASEAFEKG LRTGDVITEA GQQKVATLAD LETRIDEARE AGRKSLLLLV RRGGEPRFVA
481 LSLGQ
SEQDB ID: 3101377BQF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPTRIDSKA AGFPGRLSFV RKVMMTDLLE TLLDCETRVW QALVDGDAAA DEAALDPGFL
61 GVYSDGFSGR AEHAGQLADG PTMTRFALSQ ARVLDLAPGC ALLSYAARFR RVGRETDEEM
121 YVSSIWRQQP DGTWCNLFSQ DTPSLA
SEQDB ID: 3101377BQG
Reference:
3101377
Name: transcriptional regulator, Isotype: crp/fnr family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MICLPETGFL AEASPRLKQM LAAQAAEIGL ARGDTLFKQG DPGDALYAVL SGALEISILS
61 LDGRKLSLDL VGPGAVFGEI ALFDPGPRTA TVSAAEPARV LRVLSADVMA ELRRHPELAI
121 DMVRLAGQRM RWMGGQLNEQ VFLPVPTRLA RKLLHLAPHH DAGGATVRLS QAELAEYVGA
181 TREAVSKTLA HWKRMGVIEV ARGTLAIRDP QALRALADPD QI
SEQDB ID: 3101377BQH
Reference:
3101377
Name: intracellular septation protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispZ
Sequence:
1 MAADKDINPI LKQVLELGPT VAFFLIYLRL KEKTFQIAGT DYSGFIVATL VFIPILLAAM
61 GVLWALTGKL SRMQIFTAFM VIFFGGLTAW FNDERFFKMK TTLVYGVFAI LLGIGLMRGR
121 SYLAYVLGDV LPMRDEGWMI LTRRLCGAFT GLAVANELVW RNMSTDLWVK IETFGFPILL
181 MGFIMLQFGL LQAHMIDPDQ EQG
SEQDB ID: 3101377BQJ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDWLISLEG TPAGHDLALA LAIMAAFLHA VFGALQKGRH DPWLSRGAID GAYALMAAPF
61 ALFVVPWPEP HMWLIFATAW LIHVFYKLFQ AMAYTRGAYT VVYPVVRGTG PLFTVIGAYL
121 LFGETFTALQ WLGVGVLLAG IFGLAVYNMI FLDTARETLM PALGLAVITG LFVALYTTYD
181 AYGIRATADP FTFLAWFFFI DGPVFPVIAG LRWRAMIHRP APGPLILRGF AGGITAFLSF
241 GAIMLATRLD KVGEAAVLRE TSTVFAALIG WLVLKETVGP RRIALMGLIA AGAVIVEMGG
SEQDB ID: 3101377BQK
Reference:
3101377
Name: signal recognition particle-docking protein, Isotype: FtsY
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ftsY
Sequence:
1 MAFFSKLKDR LFKSSSKIEQ GLDAIVEDGG VEEAVTATQP DPVIPQPDPE PQPVPELPDT
61 PEMPEPQPVD PTPAPMPPEA PQPIDPAPPA EAGTGRGLLG RLFARPGGAT VVRRTLDDDM
121 LEQLEELLIA ADMGVDTALR VTANMAEGRI GRKLSTQEIK ALLAQEITRI MEPVARPMPL
181 YPKRPQVVLV VGVNGSGKTT TIGKLASQFK AAGKKVVIAA GDTFRAAAVE QLQVWGDRAG
241 VPVLTAPEGS DPASLAFDAM TRAQEDGADL LLIDTAGRLQ NRADLMEELA KIVRVIRKKD
301 DTAPHNTLLV LDATTGQNAI SQVETFQKLA DVSGLVMTKL DGTAKGGILV SLADRFGLPI
361 HAIGVGEQID DLAPFDPEDF AAALTGFERG
SEQDB ID: 3101377BQL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQTLFWIAA ACALAYLAMT ARPASLMRSA VKTASVALLA LMVLVSGGPV LLVLALALCA
61 LGDWLLSRET EATFMAGVGA FAAGHLAYVA LFLTHPASDT GQLAAQWPLV AGLAALGLVM
121 ASLLAPRAGD LKGPVLAYVP IILGMGLAAL TLPQAGVLAW VLPAAAAFIA SDMILATEKF
181 LLPPGHPALR LTPYLVWPLY WGAQMGFALA LT
SEQDB ID: 3101377BQM
Reference:
3101377
Name: alkane 1-monooxygenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWAAPGEQG DFRAGDAMLS RSTDTEGARM YRYILASLSP YAVLGAACLL GGGWAWGALI
61 WMTVYVAVMD KLPVRPLAAA DWAGAQVLPL VLAGAHFALL ALAIPALVQG ALTGAQAVAL
121 GAAVALCFGQ VSNSNAHELI HRADRWQHWL GAAIYVSLLF GHHTSAHMRV HHLWVATPRD
181 PNSARLGQGF WAFLPRAWVG SFRAGLTAER ALRKGRGATP YRAYLAGAGA MLAAAWLLAG
241 GRGILALVLL AGYAQIQLLL ADYIQHYGLE RKALANGRYE PARAHHSWNA PHWYSSAMML
301 NAPRHSDHHQ NPGRDFAALR LDPEMPQWPY AMPIMAVLAT VPPLWRRVMD PRVHAVCGAR
361 E
SEQDB ID: 3101377BQN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRLALILTL MAPAAVAQPV MSAEEFDRYT LGKTLFYGFD GTAYGVERYL SGRRVIWSFL
61 DGECKEGIWY EAAGQICFVY EDRPDPQCWV FRDTGGGLVA QFEGDPTQTE LYEAEEIGEE
121 MLCYGPDVGV
SEQDB ID: 3101377BQP
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTIWGRRTS SNVQALMWCV GELNLAHIRH DAGHRYGGLD TPEFGRLNPN RTIPVLKDGT
61 NPPIWETGAI LRYLATRYGK DSFWPSDPVR RARVDQWAEW AKLNVAQAFT APVFWRVVRT
121 APQDRDPAAI ARALAELEAK LALAEAQLSR HAHIAGDAFT LADIQLGHIL YRYYDIGITR
181 APLPHLHLYY QRLSARPAFR QHVMVPYDEL RVT
SEQDB ID: 3101377BQQ
Reference:
3101377
Name: exo-DNase VII, Subunit: large, Class: EC3.1.11.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xseA
Sequence:
1 MPEFTVTEIS GEVKRTLEGS FGRIRVRGEV GRVFQARSGH LYYDIKDDRN VLACTTWKGQ
61 VASLSVVPEE GLEVVVTGRL TAFGAQSKYN LNVDEVAVAG QGALMALLEK RKKQLEAEGL
121 FAPERKRPLP YLPQIIGVIT SPQGAVIRDI LHRLRDRFPR KVLIWPVAVQ GANCAPEVAR
181 AIEGFNMFSP GGALPRPDLL IVARGGGSIE DLWGFNEEIV ARAAAASQIP LISAVGHETD
241 TTLIDFVSDR RAPTPTAAAE MAVPVRLELL AWTGEQGARL SRAASDAVQR RAQRLRDLSR
301 ALPRPDSLLD TPRQRLDRAA ERLPAALTQG VQRRRLRLAE LSAPLRPASL RALVSARRDH
361 LAHLGSRLSP RALEREIAAQ GERLTRLSDR LNSAQTTRIE RLRQRLESAD RLRETLGYKA
421 TLARGYAVVR DDQGALLTTR AQAAKAAALQ IEFADGTLDT GGAPAKPASK PKQKPPEQGS
481 LF
SEQDB ID: 3101377BQR
Reference:
3101377
Name: phosphoribosylamine-Gly ligase, Class: EC6.3.4.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purD
Sequence:
1 MNILILGSGG REHALAWAVM QNPKCDKLIV APGNAGIAQI AECAELDIMD GGLVATFAEE
61 NAIDFVIVGP EAPLAAGVAD RLREAGFLVF GPSAAAARLE ASKSFTKEIC DAAGAPTAGY
121 ARFTQAGPAK DYIRAQGAPI VIKADGLAAG KGVIVAMDEA TALEAIDDML GGAFGDAGAE
181 VVIEEFMEGE EASLFVLVDG EEVLSIGTAQ DHKRVGEGDT GPNTGGMGAY SPAPVLSAEV
241 EARAMEEIVK PTMAEMARRG VPFQGVLYVG LMIKDGAPRL VEYNVRFGDP ECQVLMLRLG
301 AQAMDLMHAT AEGRLREARV NWAEDHAITV VMAANGYPGS YQKGSEIKGL DTLPEDSRNM
361 VFHAGTAARE GAIVATGGRV LNVTARGDSL AEARDRAYAM VEAIDWPGGF YRRDIGWRAL
SEQDB ID: 3101377BQT
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: LuxR family/sensory box protein
Sequence:
1 MPGPVDKDLL DNAYATRELR GLAFDWVPVG IVVTEARVIR EVNHRFCSMF GYEREELLDR
61 LFVFLYPSDE EFQNILHRGD KDLGEGNLYW DERVMRRRDG ELFWCRVRGQ TFTPEEPLAR
121 AVWTFADLSE IRRYQPLSRR EREVYSLLGE GKTSKEIARE LDLSYRTVEV HRARLLKKFG
181 VSNTAALFQS LGDIGGEHVV PSAG
SEQDB ID: 3101377BQU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGAMPAPAG TGFPDGIARN SDKAPRRPLR PLHTLLRGAA LTWCLWLAPV GAWACEARYA
61 EHGLPGRGAE TSFSNRTAAG RHEAWAPRDA DLRFHAAYAV ETDEYGHGVL GGLKDAKALT
121 IHVSRPGDPR ITCPAEATLP PGAVFEDIAP HLADLDGDGL PEVIAVRSTV NDGARLEIYD
181 RRARLLAATP PIGTRNRWLA VLGAADLDGD GFMEIAYVDR PHLAKTLRIW RYRDGSLTQI
241 ASLRGLTNHR IGEEFITGGL RDCGSGPEII LASADWRQVV ALRHDDEWQS RALGAFSAGA
301 VAAALSCKTR
SEQDB ID: 3101377BQV
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKITYIEHN GTQHTVEVAN GLTVMEGARD NNIPGIEADC GGACACSTCH VYIHPDWVEK
61 LPAKDDMEED MLDFAYEPDP ARSRLTCQLK VTDALDGLVV QMPEKQI
SEQDB ID: 3101377BQW
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSRSALFCA LALVGLSGCD TGLPDVDALR EPEVSRFTAE APPGAAPGTC WGKQVTPAII
61 ETVTHQVMLQ PAEIQSDGSV LQPAVYKTET RQEIVRERKE TWFETLCAQE LTPDFVASVQ
121 RALAARGFYR GAPSGEMDAR TRAAVRRYQE PQGLDSGILS RAAARDLGLV AVDRG
SEQDB ID: 3101377BQX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSVSQSCHE EISRVAGAEF CKNSDPENVP FSGPVFM
SEQDB ID: 3101377BQY
Reference:
3101377
Name: Hse(succinyl) sulfhydrylase, Class: EC4.2.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metZ
Sequence:
1 MSTDWSKRTQ AVHGGTRRSQ WGEVSEAIFL TQGFVYETAE QAEARFIDCG PDEFIYARYG
61 NPTVAMFEQR IAALEGGEDA FATASGMAAV NGALVSMLKA GDHVVSAKAL FGSCLYILEN
121 ILTRYGVEVT FVDGTDLEQW RAAVRPETKA VFFESMSNPT LEVIDITAVA EIAHSVGAKV
181 VVDNVFSTPV FSRAIQQGAD VVVYSATKHI DGQGRALGGV IIGSREFIRG TVEPYLKHTG
241 GALSPFSAWI MLKGLETMAL RVNAQAETAQ KLAEALEGHP ELVRTLYPGL KSHAQNALIQ
301 SQLGGKGGTV LSLDLRGGKP AAFRFLNALT IPVISNNLGD AKSIATHPAT TTHQRLSEAQ
361 RAELGITPGL IRFSVGLEDA GDLLADLRAA LDSSAG
SEQDB ID: 3101377BR
Reference:
3101377
Name: Glu N-acetyltransferase/AA acetyltransferase, Class: EC2.3.1.35;EC2.3.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argJ
Sequence:
1 MAKITKVSPL APAAFPTLPV IDGVRLASIA AGVRYQGRTD VMLAVLDPGT SVAGVFTRSA
61 TRSAPVLDCQ AKIGGASDGP AAILVNSGNS NAFTGHYGQT SVAEVTQAVA DVTGVPVGRV
121 FTSSTGVIGE PMKHERIVAK LGDLNAALSP DALEDAARAI MTTDTFAKGA SRTVGIDGKM
181 VKIAGIAKGS GMIAPDMATM LVYIFTDARV EQGALQAMLS AMTDKTFNCI TVDSDTSTSD
241 TLLLCATGAS GVDAEGNAEF AAALEAVMLD LAQQVVRDGE GATKFVEIRV TGAANDVDAK
301 VHGLAIANSP LVKTAIAGED PNWGRVVMAI GKSGAAADRD LLSISFGDIL VAEKGWVSPN
361 YREEDAAAYM KGQDLVIGVD LGLGAGKSTV WTCDLTHGYI EINADYRS
SEQDB ID: 3101377BRA
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLHPRDIDE TPDRDAAAAA LAVLRRWASG ATSTEISELD PSVARLLPDA ALSNYPDLSR
61 QYPEDFTVDA TYRAGLPDLQ NGPSSLIRGA KQQIQHVGIS NFRLPIRFHR KEGDDLTLET
121 SVTGTVSLEA GKKGINMSRI MRSFYKHAER TFSFEVIEAA LDDYMTDLDS FDARIQMRFS
181 YPERIESLRS GLSGYQYYDI ALELVEQGGE RLKIMHLDYV YSSTCPCSLE LSEHARSSRG
241 QLATPHSQRS VARLSVVVDG DASCLWFEDL IALCRRAVPT ETQVMVKRED EQAFAELNAA
301 NPIFVEDAAR LFCAELLADH RIGDFRVVAS HQESLHSHDA VSVLTEGATF ATASLDPRLF
361 ATLFHVG
SEQDB ID: 3101377BRB
Reference:
3101377
Name: trk system K uptake protein, Isotype: TrkH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trkH-1
Sequence:
1 MLDMRPVGYV IGLLVAILGA TMVFPLAADL IEGRGEWPVF LQSGVITVLT GAILALSCAN
61 GVREGLTIQQ TFLLTTLVWV ALPLFGALPF MFGATELRFV DAFFEAMSGL TTTGSTVISG
121 LDGLPRGLLL WRGVLQWLGG IGIIVVAMVF LPELRVGGMQ IFRSEGFDTM GKILPRAQEI
181 AGQITVIYVA LTFACALVYG ALGMSFFDAL VHSLTTISTG GFSNYDASFG TFSGLPEYAA
241 SVFMILAALP FVRYVQMVNG HSAPLFQDSQ VHVFLIVIAL LVGVTTVVLT TVFPHHVEQA
301 FREALFNITS IISGTGYASV DYMGWGGFLV TMFFVIGLIG GCAGSTACSV KIFRYQLLFA
361 SIKVQLQRIR TPHGVFLPRF QGRPIGPDVL GSVMSFFVFF IVTLGVLAWG LALTGLDFIT
421 ALSGAATAIA NVGPGLGEQI GPAGNFAGLN DAAKWMLSVG MLIGRLEVMS VYVLFTVQFW
481 RA
SEQDB ID: 3101377BRC
Reference:
3101377
Name: peptidoglycan-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQPPPQRQRH ICPVPALAAA LISPHRPAPR ACPMAIAAIS CITCGDDTYL KVRDPTMIRP
61 LIAVLSLFYL ISSAALAQQS ADEVVWVQIE AQPNLRTAQE RAQTYAADLS DVAGFSLGGG
121 WYGIVLGPYL REDAEQVLRV YRAERRIPGD SFIALSGALG QQFWPVGSDL LNRGAAVAPV
181 EQTAPEPVAE ATPQVQPEPA DETPAQARRS EQALSREERQ ALQIALQAAG FYNAAIDGAF
241 GAGTRRSMAD WQGFNGFEAT GVLTTRQRKV LMDQYNAPLI STGMARHRDT AAGIEMDLPL
301 GVVRFSRYEA PFAHFDASGE LGAQVLLISQ PGDKATLYGL YDIMQTLEIV PLDGPRERGS
361 DSFTLEGRGN GIVSYTEAAL SGGEIKGFTL IWPTGDEDRR ARVLAAMRAS FARTDGVLDP
421 AAGGDAVQSV DLVSGLEIRK PRLSRSGFYV DGKGTVLTVA EAVQGCTRVT LDGSYGAQVV
481 DRDAGLGVAV LRPEQALAPM VVAGLGQEMP RLGADITVAG YSYEGILGAP TLTFGTLDDV
541 KGLRGETELA RLGLMAQTGD AGGPVIDDQG TVVGMLLPAP ATGQQLPRGV SFAAKAQALR
601 DVLSAAGMGA QQAETAGRIT PDELNRRASG MTVLVSCWD
SEQDB ID: 3101377BRD
Reference:
3101377
Name: Gly-tRNA synthetase, Subunit: alpha, Class: EC6.1.1.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glyQ
Sequence:
1 MTHPTPTAPR SFQEIILRLQ TYWASKGCAI LQPYDMEVGA GTFHPATTLR ALGSSPWAAA
61 YVQPSRRPTD GRYGENPNRL QHYYQYQVLI KPSPPDLQEL YLGSLEAIGV DMALHDIRFV
121 EDDWESPTLG AWGLGWEVWC DGMEVSQFTY FQQVGGHDCA PVSGELTYGL ERLAMYVLGI
181 DHVMDMPFND PQSPIPLSYG DVFKQTEEEY ARWNFDVANT EVLLRHFEEA EAECAAILAQ
241 THDDPKTGKR IVMAHPAYDQ CIKASHIFNL LDARGVISVT ERQAYIGRVR ALAKQCADAF
301 VQTTAGGYAA A
SEQDB ID: 3101377BRE
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQATRDSYE EKLRKARRRL KRHVRTAQSE GFMTGAAAML RPGDVVIDCG ANVGDVTAVL
61 SATGATVHCF EPDPYAFSLL EERFGEATNV HLHNQAAGVA AGSIGLMRAE SFGEDPRKNT
121 VMSTTLPGGR GISAQAEDVI EVEMIDFPAF LSGLIAEHGD IAMLKMDIEG AELDILEAME
181 ERDLFDSVRV TLVETHERKF PDLRPRFRAL KERIGEKYAT SKVNLDWI
SEQDB ID: 3101377BRF
Reference:
3101377
Name: Na/Glu symporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltS
Sequence:
1 MTETLHISAF MTVTLGLAVY LVGVRINDRL PFLERFSIPE PVTGGLLASL VVLGLNSVFG
61 IELAFDLTGR DFLLVLFFTG IGLNARLGDL IAGGKPLAIL LVLTLLTILA QNVIGVLGAV
121 VFGFPPQAGV LFGSAALIGG HGTAIAWAPE VAQATGLASA TELGVAVATL GLVIAALIGG
181 PIATYLVESR KLTPNRPDEE LTVGLPNEMD EEPPQIDHKS LMRVLLTLNV AILLGYGLQE
241 SIEELGLKLP LFVPCLLSAI VVGNLRTALF PRALRVSRTP TLALISEFAL GAFLAMSLMS
301 LQLWTIAETG LALAVIIAAQ TLFALGFILL VLFRAMGGGY RAAVLAAGFG GFALGATPTA
361 IANMTAVTKR YGPSPLAFIV LPLVSAFFVD IANAVVIQMI VNF
SEQDB ID: 3101377BRG
Reference:
3101377
Name: Gly-tRNA synthetase, Subunit: beta, Class: EC6.1.1.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glyS
Sequence:
1 MPDLLIELFS EEIPARMQAR AGEDLKKRIT DGLVEAGLTY AYAAALSTPR RLVLAVEGLL
61 DASPTQREER KGPKVGAPEQ AVEGFLRGAG ISRDQLEERE TPKGAIYFAT IEKPGRPAAA
121 IVAEVLEDTI RNFPWPKSMR WGAGSLRWVR PLQSILCILT TEAGAEVVPL DIDGIKAGDS
181 TAGHRFMAPA RFSVTSFEDY QVKLKRAFVV LDPAERAEHI WNDAQNMAFA AGLELVEDKG
241 LLAEVAGLVE WPVVLMGQIG SEFLDLPAEV LQTSMREHQK FFSVRNPKTG RIERFVTVAN
301 RETADNGATI LAGNQKVLSA RLADAKFFWD NDLRAAHAGM DAWVQALENV TFHNKLGSQG
361 DRIRRIAALA RELAPVVGAE ADQAEQAATL AKADLSSEMV FEFPELQGLM GRYYIAASGQ
421 DAAIAAVAQD HYSPLGPSDE VPTAPLSVIV ALADKLDTLT GFWAIDEKPT GSKDPFALRR
481 AALGVIRLVL ANDLRLPLDR SIDAQLLRHK YHASNGEAAL RDLIEEIADH GVFGAAFETI
541 KEKLGDAGAL EALAGDVPDL SADLLAFIHD RLKVFLRDEG IRHDVIDACI AMAGNDDLNL
601 LVKRARALNT VIATEDGENL VQGFKRANNI LTQAEEKDGV EYSFGADIKF AEADSEKALF
661 AALEQAESKI NVALKAEDFA AAMTAMAALR APVDAFFDQV QVNSDNQVVR RNRLNLLSQI
721 RKVCSSVADL TRIDG
SEQDB ID: 3101377BRH
Reference:
3101377
Name: pyruvate,phosphate dikinase, Class: EC2.7.9.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ppdK
Sequence:
1 MLPVRTWCLR RLQTPLFCTQ TRGAAVQNNP NTTLITSTAP VATSTHGGRA KCLQRLVRLD
61 LPVPRTVALS FGAVHDIAQG QLPDIAAIVS QFDPTALLCV RPSSEDPDWG GPGAVLNIGM
121 NDARFVELSD RMGAEAAAAL YLRFVQTFAI HVARLDPDVF DEIEADGREG LRQSLRAYED
181 ETDESFPQDP GEQLAAVLRS MARAWEGTSA RLLRQAKGAP ADAGLGLVVQ EMIPGLGQGE
241 CGSGVLQLVE PATGLPQITG RYLSQSQGRD ALGAGAEALY LEKDPRGISL EDVAPEAFAA
301 LKQHAALMRE KLREEMQVEF VIESGRVHIL DGVRVPRSAR AALRIAVRLA EDGIIPQQEA
361 VMRIDPHSVN ELLHRQVHPQ ARRDVLTTGI AASPGAATGK IVFTAAEAQA SAARGEPCVL
421 VRRETSPEDV RGMHAAVAVL TERGGMTSHA AVIGRGLGLP CIVGASDMEF QTKARQIKAP
481 DGRVFRTGDI LTIDGSTGQV LAGQPEMIDA ALDDSFQTLM AWADAERDIG IRANADTPAD
541 AQAARNFDAQ GIGLCRTEHM FFEPGRLTVM REMIFAATPS GRKAVLERLL PMQRQDFVQL
601 FRIMEGKPVC IRLFDPPLHE FLPTTRSGQR ELAEALDLPV SDVTRRVEAM SEYNPMLGLR
661 GVRLGVTVPE IYDMQARAIF EATLEASRKG EPVVPEVMIP LVSAKREVEL VKARIDAVAS
721 AVASERGQEF DYRLGVMVET PRACLRADEI AACVSFLSFG TNDLTQMTYG LSRDDAGRFM
781 SAYVRQGVFS EDPFHVLDRD GVGELLKLGV ERGRRGQPGV TVSVCGEHGG NPESIAFCRA
841 AGFDYVSCSP FRVPVARLAA AQLAISDKLG ISSD
SEQDB ID: 3101377BRJ
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRFVLTVLL SAAVTLPEFA FADRGSEAVG AAEQAEAPRK GKSFRNYLRA LLPKPEEEAP
61 VTAVDFSRSW IDQQPRAEGG EQWQCLAEAL YFEARGETIK GQFAVAEVIL NRVQSERFPN
121 TPCGVIRQGT GRKYQCQFTY TCDGRKEVIA EKQAYERVAK VARLAMDGAA ESLTDGATYY
181 HTTAVRPSWA RRFTQTTKIG VHLFYRQGQR TASN
SEQDB ID: 3101377BRK
Reference:
3101377
Name: multi-Cu oxidase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFTRRHVLK TATACALMPR LAEAAPITLT AMEARQQIAP EGYPDTAIWG YEGGAPGPEI
61 RVAQGGRLSR RLINRLPQPT AVHWHGIRID NAMDGVPGLT QQAVPTGGSF DYDFTLPDAG
121 TYWYHSHNRS MEQVARGLHG PLIVDEASAP DIDGEHVLVL DDWRLDPDTA AIGANFDNGH
181 DLSHAGRIGN LLTVNGRFDP AFRARPAERL RLRLINAANA RVFEVGLDGM QGWIVALDGM
241 PLEEPLVVSG AFPLAPAQRA DLIVDITAET GASASLLSIE RDGGYGLCRF DVSGQGAGAA
301 RAAPAPLPPN PLPVIEGLAD SPLHQMRLQG GAMRWLDSAL LGETEMSGRE LAQLGKFWAL
361 DGRADRSATP FLEAARGSLH RIAFVNETGF DHGMHLHGHH FRLIAPNGAL GPWRDTVLVA
421 PGETRQIALV ADNPGDWLLH CHMLGHAAAG MTSWFRVT
SEQDB ID: 3101377BRL
Reference:
3101377
Name: dihydroneopterin aldolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSEIRLAFA HPSERSEATA SRGPLDRISL RDHVVEVEIG AFQAERGTTQ RICFNVVVEV
61 MPLTGPIDDD VDRILSYDRV TEAIARALAE ERLNLLETLA ARVAELILHE PQAVRVFVRI
121 EKLDRGPGAL GVEIVRGRDK LHVDQNEDLR PHPRLVYLSN AAIDSAHLKG WIDQLEHRER
181 PLIICVGASS LAVPQTGHAM TQRRIDLLAI EQNAWRLAAR DLRCKVVSTR TELDWAMKNG
241 QICVWAPSKI VLDAVDGPSA KPSEAVALAA WFAATFEAGE MLVIGAALPE GTEVPLRAVP
301 VEQAEL
SEQDB ID: 3101377BRM
Reference:
3101377
Name: dihydropteroate synthase, Class: EC2.5.1.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: folP
Sequence:
1 MGQAHLMGIL NVTPDSFSDG GRHFGIEAAR RVALEMVAQG VSLLDVGGES TRPGALEVPA
61 EDEIHRTAPV IEAIRAETGT AISIDTRKAS VAEAALAAGA SLVNDVSGFT FDAALAPLCA
121 ETRTPVCIMH AQGDPATMQQ DPHYDDVLLD VYDFLAAQVD RLVARGMARG QIVIDPGIGF
181 GKTQDHNLTL LRNLSLFHGI GCPILLGVSR KRFIGTIGKE PRAQARGPGS ISVGLAGLAQ
241 GVQILRVHDV AETAQALRLW AAVR
SEQDB ID: 3101377BRN
Reference:
3101377
Name: phosphoglucosamine mutase, Class: EC5.4.2.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glmM
Sequence:
1 MRKLFGTDGV RGTANTHPMT AEMALRIGAA VGRYFRREAG GVHRVVIGKD TRLSGYMFEN
61 ALTAGLASTG MNVLLLGPVP TPAVGLMTRS MRADLGVMIS ASHNSAEDNG IKFFGPDGFK
121 LSDQAEMEIE EMVATGVRLA QAHNIGRVRR VDDARFRYGE RVKSSLTRGL RLDGLKVVVD
181 CANGAAHRTA PEILWELGAD VVPIGTSPDG LNINRGCGST CPRTASEAVV AHGADVGICL
241 DGDADRVIVI DQLGNVADGD QIMALLAARW AAEGRLQGGA LVATVMSNLG LERFLGDRGI
301 GLERTAVGDR YVVERMREGG FNLGGEQSGH IVMSDFATTG DGLMAGLHFL GEMMRSGQPS
361 SELVRQFVPV PQLLKNVRFA KGQTPLDAAS VQSAIAEAEG VLNGSGRLLI RKSGTEPLIR
421 VMAECEDEAL LTRAVDSVVE AVADAVQA
SEQDB ID: 3101377BRP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQSPDITAK SWAMVATLGF VWGGTFLINE LALEGITPFW LAAGRVCFGA LLSTLVWRAM
61 GGRLFSAPLS GSERLSLVII ALLSSAVPFS LIAWGQQYVT AGFTGVSMAS IALMVLPLAH
121 FFVPGERMTW RRALGFAIGF AGVALLMGAQ AFESSGAALE LPGRLACLAA TACYAVASIL
181 MRRLPAVDPM GLSTVLLLIG VVAVLPMAWI AEGPPPSTDL RTLGLIVFLG MVPTAAANLL
241 RVTLIRSAGP VFMSLTNYQV PIWSVLLGAA LLGEPLPPVL LWSLLLILGG VGLSQYGALR
301 RLFTRQ
SEQDB ID: 3101377BRQ
Reference:
3101377
Name: ketol-acid reductoisomerase, Class: EC1.1.1.86
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvC
Sequence:
1 MRVYYDRDCD INLIKDKKVA ILGYGSQGHA HALNLRDSGA KNLVVALREG SASAKKAEGE
61 GLTVMGIAEA AAWCDVIMFT MPDELQAETY KKYVHDNIRP GAAIAFAHGL NVHFGLIEPK
121 EGVDVIMMAP KGPGHTVRGE YTKGGGVPCL VAVHTDATGK ALEIGLSYCS AIGGGRSGII
181 ETNFREECET DLFGEQAVLC GGLVELIRCG FETLVEAGYA PEMAYFECLH EVKLIVDLIY
241 EGGIANMDYS ISNTAEYGQY VTGPRILPYE QTKASMKAVL TDIQQGKFVR DFMLENAVGQ
301 PTIKASRRAN DEHQIEQVGQ KLRDMMPWIS AGKMVDKSKN
SEQDB ID: 3101377BRR
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDDIDRRIL RHYQADPSLS AGELAERCRI TSGVCWRRIE KMQAAGIIQG QEAVIDWAAL
61 GFAVEVSLRV TLDKTQPRAF DDFIEAARKV PEVIEIQTFL GRVDVRLSVI ARDMAHYQQL
121 YRDRILTLPH IADIEALMHI ARLKRDEVLP V
SEQDB ID: 3101377BRT
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTELDEIDRK LLRALAQDAT QSAGALGRRF GLSQPATWRR IRRLEEAGVI KGRRLRLNAE
61 ALGFGVTVFL GVKLARKGRV SLEDFERAVS AIPEVQTVEH VLGLYDYRLR VVARDLSDFE
121 RILRRRIMTL PGAGEVEANV LLSEERLPGP IG
SEQDB ID: 3101377BRU
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQQKRTSFH AVRDEVKRRI ESRIWPQGTL LPTESDLAEE FGCARATVNR ALRELAEQGF
61 VERKRKSGTR VKTAPVRQAR FEISLARRVV EEQNGDYRYA LVERAEIAAP AWLSSQLGLP
121 PGTRVLHLLC MHYADNRPFQ LEERWVSLAA VPAMEQADLS RIGPTEWLMT AIPFTDAEIA
181 FGAIGADSRL AEFLSTSVGM PVMQMERTTW LKGQPVTFAR LTHHPGFRVR TAY
SEQDB ID: 3101377BRV
Reference:
3101377
Name: aminotransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAALLETVDP EGLEEFSVVF TDRSLNHMSS VFQQVMRDIS GMLGAVYNTD AVAVIPGGGT
61 YAMEAVARQF ARGARVLVVR NGWFSYRWSQ IIETGGLTAE TTVMKARRSG NESTAPFAPA
121 PIEDVVTAIR EQKPDVVFAP HVETAAGVIL PDDYITAMAA AAHEVGALMV LDCIASGCVW
181 VDMKATGVDV LISAPQKGWS ASPCAGLVML SERAEARLAE TQSDSFAIDL KKWRDIMKAY
241 EGGGHAYHAT MPTDALRAFR DTMAETRDYG FERLREAQWA LGNGVRALLR DKGIVSVAAD
301 GFGAPGVVVS YTSDPDIQNG KKFAALGMQI AAGVPLQCDE PADFRTFRLG LFGLDKLYDV
361 EGTIARLKRV LDQVL
SEQDB ID: 3101377BRW
Reference:
3101377
Name: 2-octaprenyl-6-methoxyphenol hydroxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHESCDILIS GGGIAGLTAA AAFGSAGFSV ICVDPAPPVT KRDVDGSDLR TTAFLQPAQV
61 LLDNCGLWAR LADHAAPLQI MRIVDAGGEV PEPRVVRDFN AADLSDRPFG WNLPNWLLRR
121 EMVARLAELP NVDFRPGTAT SSLFTRTAEA RVGLSDGSRV TCKLVLAADG RSSPMREAAG
181 IGVKTTRYGQ KALAFAVTHP IAHQNVSTEI HRSGGPFTLV PLPDWQGQPS SAVVWMERGP
241 KALELLDMAP EAFEAAMTER SCGLFGPLKL ASRRTIWPII SQSAERLSGE RIALMAEAAH
301 VVPPIGAQGL NMSLGDLRSL LELAQARPED LGDAQMLAAY HKARHAEIEL RVKGIDLLNR
361 ASMVEARPLR DARAMGLNAL YSLAPVRRTL MQMGLGVR
SEQDB ID: 3101377BRX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAIDLPRNL PLGQRLLFSV PLLGRIAKEV AYGDSDNIYY AIVAGLSLWG IAILLFGIPG
61 LYIPALALVP VIWTLLILIT RG
SEQDB ID: 3101377BRY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLKYARGPV SYLYRDVEKN GKTSRRKVKQ VLWGDWIDVR DPIDATWAHV RYGKKPYLMK
61 RAELQDERVL ELIFLDIGQG DACILTEPGH HHPPRVMVID AGIGRNTNGF LNWRFRDFDN
121 SGQIHAAIVT HPDADHYRGF QPIFENRRLR IDHVYHSGLV ERVGDDLLGP EQGGYLSDIV
181 ASDAQLRPLL ADPARRGRKL YPKLMQTALE TDRIGPVTAL TTTHAVQENG RAWLPGFAPA
241 DGGLITIEVL GPVVEPDAAG QPRLRAFGDR PTSRSMDEGK TKNGHSVLLR LDFNGFRVLF
301 GGDLNTSAEC FLMQHYGGVP VSAPLAASAA ELAAIARPEA IAAAGERFGV DLMKICHHGS
361 SDVTEEFLQA AHAAAYVVSS GDEEGHVHPR PDLLGLLGKM GAGARPLLLS TELLRSTRER
421 ERDDLRPTLD RLNGRIEAEL ARGAAADATA LKEMRAAKRK LLDEVFRRNV GVYGAINLRT
481 DGRDAVIAFR KEKAPAHRRW FYYEMRRDPD SGGFLPVLGD GH
SEQDB ID: 3101377BT
Reference:
3101377
Name: mutator mutT protein, Class: EC3.6.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mutT
Sequence:
1 MKTVLVSAVA LIDVDGRVLL AQRPEGKSMA GLWEFPGGKV EPGETPEVAL IRELHEELGI
61 NTWASCLAPL TFASHGYDDF HLLMPLFACR KWEGIPQSRE GQALKWVRAT ELRNYPMPPA
121 DVPLIPILRD WL
SEQDB ID: 3101377BTA
Reference:
3101377
Name: pyrimidine 5'-nucleotidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVREAFSHVT TWVFDLDNTL YPPAMRLFDQ IEVRMTAYVM EALGVTRAEA DRLRAHYWRQ
61 YGTTLAGLMR EHGLDPDPYL VAVHEVDMSH MTPDTALASH IRALPGRRIV YTNGSAPYAE
121 RVLAARGLTG LFDAIYGVEH AGYRPKPERA AFEEVFTRDG VIPERAAMFE DDPRNLTAPH
181 EMGMRTVHVA PDPHPADHIH HHTDDLTAFL SRLT
SEQDB ID: 3101377BTB
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQGRPAQKD AYHLILEAID SGIYKPGDRL VESELAERFG VSRTPIREAL QRLETQSLLE
61 RDGRSMIVAS LDHNQMAELY QVRRELEGLA ARLAARHATA EEIAVLRDMV VADDKLVGNP
121 QALSRANRRF HEQIHLASHN RYLVQQLDLV HRTMALMATT SLAAEGRGEI AQNEHKGIVE
181 AIAARNEDAA EKALKDHISI AFMTRLKLDA DSRERR
SEQDB ID: 3101377BTC
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGLHIMSDL HLRLSSASLA HPAPEPHLPL GRYLVRSGVI SQAQLVQALQ MQLRLDAPIG
61 EILIAEGWAE PNDILRALAL QNGVQWADLA SDPPRAELCG LMPLDFWLRH GAIPWMRLGP
121 MVIIATARPD RFDQLRAEMA QTGILLMPAL SSRDQIDTAL ARHYAPTLAQ LAETRVAPLY
181 SCRTWNWRSR IAGSVVLLSL LILLLLAPIK GLTLLFLAAV FTLSLFAGLK AVALLAHLMN
241 QSHLTAPHAP GLAAEIQGLR LPKISVLVPL YKEREIATAL VTRLSRLTYP KALLDVILVL
301 EEKDEVTRQT LSQCTLPAWM RVIEVPGHQG LTTKPRAMNY ALDFCRGEIV GVWDAEDAPV
361 ADQLEHVAAH FAQAPQEVVC LQGILDYYNP RSSWRARCFT IEYASWFRIV LPGIARLGLV
421 VPLGGTTLFF RRRVLEELGG WDAHNVTEDA DLGVRLCRAG YRTELIDTVT YEEANFRPWP
481 WVKQRSRWLK GFMVTYLVHM RAPLRLWSDL GTRRFLGVQA FFLGTLGQFL LAPVLWSFWL
541 ILFGLPHPME GVLSAPVLFL CTAIFGATEL LGLAIGLVAV SGAQRRFLIP WALTMPLYFP
601 LGVLAAYKAL YELMVNPYFW DKTQHGQACE EKPAPPPGSS LEGARQQGFH
SEQDB ID: 3101377BTD
Reference:
3101377
Name: carbamoyl phosphate synthase, Subunit: small, Class: EC6.3.5.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: carA
Sequence:
1 MAQNPLSKPT ACLVLADGTV FYGTGFGATG QTVAELCFNT AMTGYQEIMT DPSYAGQIVT
61 FTFPHIGNVG VTPEDDETTD PVAAGMVVKW DPTAASNWRA AEELKGWLAR RGRIAIGGVD
121 TRRLTRAIRQ QGAPHVALAH DPEGKFDLAA LIAAARGFAG LEGMDLAKDV TCAQSYRWDE
181 MRWAWPEGYA RQEAPKHKVV AIDYGAKRNI LRCLASSGCD VTVLPATATA AEVLAHAPDG
241 VFLSNGPGDP AATGEYAVPM IREILDTTSL PVFGICLGHQ MLALALGGRT VKMNHGHHGA
301 NHPVKDLETG KVEITSMNHG FAVDAQSLPE GVVETHRSLF DGSNCGIRMS ERPVFSVQYH
361 PEASPGPQDS FYLFERFAAA MDAQKAEV
SEQDB ID: 3101377BTE
Reference:
3101377
Name: GatB/YqeY domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDMRARVNTA LKQAMKDKAA DRLSTLRLIN AAIKDRDIAV RGSGDEEAAC CGDAEVLAIL
61 GKMTKQRQES ARAYEEGGRL DLAERERQEI SVIEEFLPKQ LDEDEVESAV RAAITATGAG
121 SIRDMGKVMG ELKARYTGQM DFGKVGPMVK DQLCAAGNC
SEQDB ID: 3101377BTF
Reference:
3101377
Name: prephenate dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTRPGIAAP SEPVMSCHLT FRSVGLFGFG AFGRLIATHL TPHLPCLVHD PALPDGANLP
61 AGLSIASQAE AAGCDLVILA MPVAGIAEAC RAIAPHLRPG AVVADVGSVK MTPAAIMQAT
121 LPGHVALIGT HPLFGPQSAR HGIAGHKIAL CPLRGRAHLP VAAFLRARLG LRVILTTPEA
181 HDREAATVQG LTHLIAQAMN RMGPLPDRMT TASFDLLKQA VEMVRHDPPG VLAAIESANP
241 FAPRVREEFL GLIEGLDRAY AGRD
SEQDB ID: 3101377BTG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYWPKPGSKR DLKKRWQKPD RIFFGFGACH ILCGAYLKWP PLEGFYAEQI LPASGFPGSH
61 IYATDGVVSF DYHGYALREN LLRHYEAGWQ ARYPGWTGRI ELVDFDLLDT TALNMRKFWG
121 PDQYPGDALK RAYNSIARID HVTARNKALQ TRPRNAVIDR PAAAS
SEQDB ID: 3101377BTH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPYDWKRTET RQELRLWPHN SLPPRGAAGF VLLVFALGLL PLIAVLGSPL LWGLLPFLLL
61 AVAGLWLAIE ANYRQRRILE VLTLDPERAH LVRHNPRGAV QEWDCNRYWA RATLHAHGGP
121 VPHYVTLQGC GREVEIGAFL SEDERIALYD DLREMLSK
SEQDB ID: 3101377BTJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQIMKATWS VFSMVREPVH ILGRFVEHNL SAGASYVHLF FDDPDDPAYD TFANQPGVIA
61 QRCDSAYWRG LNRRRPPYVE RRQLVNGRVA YERCLTDWQA HFDADELVVT RDSALGSQLA
121 TVPDSHQTAH LGTLEPMVPP EDHDGPVPFR RSVRHLKFRA RLHVYGDDLQ VFRNGLFGHY
181 QGKSILRAGL QGWGHGIHFP RPASAEIENA IHEMDNAWIA HMHCENRDLW VNRTLNKMRD
241 GSYNLRTGNY DILPYVAPEA AALDNPTEED LLQLLTGFYD RVSVLSEDLR QRMEDLDLLQ
301 YHEVRLLD
SEQDB ID: 3101377BTK
Reference:
3101377
Name: cytochrome c oxidase, Isotype: I, Subunit: aa3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ctaD
Sequence:
1 MADAAIHGHG HEDNRGFFTR WFMSTNHKDI GILYLIFSAL AGLISVLMTV YMRLELMEPG
61 VQYMCLEGFM ADPCTPNGHL WNVMITYHGV LMMFFVVIPA LFGGFGNFFM PLQIGAPDMA
121 FPRMNNLSFW LYVAGTSLGV ASMLTPGGND QLGSGVGWVL YPPLSTTEGG MSMDLAIFAV
181 HLSGASSILG AINMITTFLN MRAPGMTLFK VPLFAWSIFV TAWLILLSLP VLAGAITMLL
241 MDRNFGFTFF DPAGGGDPIL YQHILWFFGH PEVYIVILPG FGIISHVIAT FSRKPVFGYL
301 PMVWAIIAIG VLGFVVWAHH MYTVGMSLNQ QAYFMLATMV IAVPTGVKVF SWIATMWGGS
361 IEFKTPMLFA FGFLFLFTVG GVTGVVLSQA AVDRAYHDTY YVVAHFHYVM SLGAVFAIFA
421 GMYFYFAKMT GRQYSEFWGK IHFWMFFIGA NLTFFPQHFL GRQGMPRRYI DYPEAFAYWN
481 KISSYGAFIS FASFLLFFGI VFYALTRGAR ETRNNYWNEY ADTLEWTLPT PPPEHTFETL
541 PKQEDWDKGH AH
SEQDB ID: 3101377BTL
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKNDKSGEV SASDIFAFFN EIGIINQLSS TLLARTLPQG VHPSHFGIVN HLYRLGDGKT
61 PISIASAMQV SKNTMTHSLR VLVDHGLVTV VPNPGDARGK LVFLTPEGRR FREESIQRVA
121 ARFGHLFKPE HVEAMLRIRE DLSSIRRHLD ENR
SEQDB ID: 3101377BTM
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRRGFLKLA GGGVILAAGG AALFAATRSP GKALAPWATA GGTAYADPRM NALSYAILAP
61 NPHNRQPWLV SLEGEKTAVL RFDTERQLPH TDPFDRQLTI GLGCFLELMV MAAQANGYAV
121 TLDLFPDGSS ETGLDDRIVA RARFREDPTL APDPLWPYVP ARRSNKEPFD TARAVSATDL
181 DALLASTKHG TRLGGSVAPD EIGFWRELSA QALRIEIETP RTYKESVELF RIGKAEINEN
241 PDGIDFSGPM FESLRLAGLF DRNVALDTGS VAYSQGIEAV MDNCRSAMGH IWMTTAANTR
301 MDQIAAGRDW LRANLAVTRA GLGVQPLSQA LQEYPEMAEL YHRVHNRLAP DGGTVQMLAR
361 IGYGPDIPVS PRWPIEAKMV TD
SEQDB ID: 3101377BTN
Reference:
3101377
Name: HIT family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMAYDPDNI FAKILRGEIP STRVYEDDDT LAFMDIMPRA DGHLLVIPKT PCRNLLDASP
61 AQLAAVMATV QKLSHAVMAA FGAEGVTIQQ FNEAAGGQEV FHLHFHVLPR HEGERLRPPG
121 QMGDMAVIAE QAEKIRAALG
SEQDB ID: 3101377BTP
Reference:
3101377
Name: cation efflux system protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPHDHGAAPA HSHAHGHHHH HHHHHIDPAA GDARITWAIA VNMVLTLAQV VGGLLSGSLA
61 LIADALHNFS DAVALIIAFG ARRIARRPAD ARMSYGYGRA EVIAALINYT TLIVLALYLV
121 YEGIMRFLDP QPIDGWLVVW IAALALVIDL VTAALTWSMA KTSMNIRAAF LHNLADALGS
181 VAVIVAGSAV IWFGWTWVDP LVTLMIAAYI LWHVWVEIGA AIGVLMLGTP PGYEPETVAR
241 EIEAVEGVQS LHLLHLWSLQ ENAAALSAHL VIEPGAWGQA DAIKARVKTL LEDKHGIAHV
301 TLETECAAHA CHDAQRIGSA
SEQDB ID: 3101377BTQ
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAACEERTS LVVEAEENTI RDEATYLTPP SREQVIAAIY ETVLRPDLYE HVMAMWEAHI
61 DALTRDADPE TGSATDIDLD RELQKHFQRA HVILEQLGRK SPQSELELRV EGAPGLVMLA
121 GPDRRVRAAS ARARTVLGGA RDLSLVSGHL AGSGAQMLDR MVEAARSGDL RVPAVVLTTD
181 IRPRHLIARV ITCPDGAGQV MIEGLDYQWT PAAERVLVAS FGLSPAEVEI VRNLMEGRSL
241 REIAQSSGRS EHTVRNQAKS VLAKTGAPGQ VDLIRLVAFL IDRGNQLRLG GHPGAVDLND
301 DVLDMGTGLR MQLYQCGDPR GRPVLYLHGM LDGMAPLEYL KHDFARRGLR VLAPVRPGYG
361 LSEPVAGVEP GLRAMASHAV ELIDRFALDR VAILGHMAGA VTGYVLRAGG DPRLAGMVAV
421 AASGPLLRRA QLSGMARRQR MMAMTARWTP ALLPFFVRAG IALIDSEEVG RFMDALYPPG
481 SHERQVVDRL ELAALMHAGY RFAAQSGTAG FEADALTMVS PWQRLSDGGT CPVVHLHGAL
541 DPVVPAAETA RFAASISGAS FRRFEDVGQF LIYERPDAVL DAIEAMLPPR
SEQDB ID: 3101377BTR
Reference:
3101377
Name: lipoate-protein ligase, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lipB
Sequence:
1 MEWKITDGLT DYDAAVAFME ARAAAIAAGE AEECIWLLEH PPLYTAGTSA RPADLTDPDR
61 FPVYESKRGG QYTYHGPGQR VVYVMLDVGK RGHDVRRFVE QLEEWVIAAL AEFNIRGEIR
121 PGRVGVWVRR EDKPLTLGGQ PAEDKIAAIG IRLRKWVSFH GISINVEPDL SHFSGIVPCG
181 ITEYGVTSLV DLGLPVTMGD VDVALRQSFE RVFGAD
SEQDB ID: 3101377BTT
Reference:
3101377
Name: thioredoxin domain protein, Isotype: DsbA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAHPPRPEL QIDIVSDVVC PWCIVGFRQL DQALAATGVL ARLRWHPFEL NPQMGPEGQN
61 LREHIMEKYG STPEQSAEAR ARLTAIGAEL GFTFNFTDDS RIVNTFAAHQ LLDWAEGQGR
121 QHPLKQALFA AYFTDGRDVS DLSVLLDAVE AAGLDREAAQ TALTSGAHQA PVREKQKFWA
181 QHGISGVPSM VFGGKYLLTG AQGADTYAQV IQRCLAEAA
SEQDB ID: 3101377BTU
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGHATMRFN FTKETPQVYD AMLALNTAIS QANPDSRLVH LTKIRASQIN GCAYCVNMHV
61 KEAQQDGLPD MLLHLIAVWR ETSAFTARDR AALAWAETLT RLEDSEVSQA DFDAARAEFS
121 EQEVAALTAS IAMINLWNRM AISAHLPV
SEQDB ID: 3101377BTV
Reference:
3101377
Name: Rrf2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLGDGVEA ALHCAAVLAE LPEGKVLSGR DLAALHGVSE SYLLKHMRAL TAAGVTEAVP
61 GPRGGFRLAR APRQVSLLDV VEAVDGPGPA FVCREIRRKG DVTSNDPCAY RKDCFIKRRM
121 LSAEQAWRTA LRGQTLADLM ADARAEIGFE NLQAVGGFIE EKQR
SEQDB ID: 3101377BTW
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSYLDNNAF EATPQRVLDQ FAAANTAAPA ALMEVWRAGL SVAKAHGETE LGSGQPASAD
61 DRFEVGSQSK MMTAVLVLQL VQEGKVALDD KLSDHLDLSG LPDIANLETA TIRHLLANRS
121 GIPDFDTVMG DSGLPVFIEN IIANPDVPQG PDEMLDIAAG HPAAFAPGQG YEYSNTNFLL
181 LEKLIEKVTG NSMGHELTTR IFDPLGMDDT LPGALERPAD ILHSYATLPD GTPLEVTNVP
241 INLGGAGGVV STTADMIRFL DALLVSKTLL SPEMLAQMTD YRDGDNQPSG NGNGLGLGAT
301 ELNGQHFVGF FGGTLGTNSG TILHVESGTI VSVAVTHSGV EPSTLVLTAF ELIFSDGHWA
361 SFDPTDDSFT IEGSAAEVDL YQDTSATGAV ETVLTKGDVS LSFAGDMAGF DEAQLSFSDG
421 SVLRVADAGG EWIDILHDTR LGDGGETVQA GPQDADNRLI GLGGNDGLFG AYGDDRISGG
481 GGNDRLGGRD GDDALEGGDG HDVLDGGRGD DQLSGGAGSD QLNGGRGDDT LEGGAGHDLL
541 DGGRGDDQLS GGAGSDQLSG GRGDDTLEGG AGHDLLDGGR GDDQLSGGAG SDQLSGGRGD
601 DTLEGGAGHD LLKGGRGDDR LEGGAGHDML IGGSGDDVFV FAATAGHDHV LDFQAGADRL
661 DLSGAGVSFA ELTITAPTDG FAHVAFGQTE ITLTGQFSEL TEADFLF
SEQDB ID: 3101377BTX
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPPDLAPDI ATFEVALAMA LLVLSLFCAH ALCQPRKALV VRWPLVVFFA LNAIGLLRYV
61 MRGLDPGMEW PRTLLLLELA NIPISLAQPA LLWFYVCLLT GAGPLHLPRR ALWHLLPALL
121 AVGLVTVAAF QPQSTFDNLI LPFAEMSWLE RGLVLGFYLA TVLFHLMGPV YSLLVIRQLM
181 RYRIALKDLF ASTERREMSW LRWLALMALA FWCVNIVDVL LEVLEIGLPP INPWLDLTVL
241 AAAHFLLVWV LGLWGLRQKP GLLPPERPTP TAPTPLPTPK PMPPAPRKYG KSALSDSRMD
301 RLADKIRLLM EVDHLYRDPN LTLWDLATRL GASTNHVSQA LNEGVGQCFF DYVNEWRARD
361 AATRLRGSED TVLDVAFAVG FNSKSAFYKS FRRVFETTPT QYRQRHRRA
SEQDB ID: 3101377BTY
Reference:
3101377
Name: transporter protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFDVLRHRAY RHLFAAQVVA LTGTGLATVA LGLLAYDLAG PRAGIVLGIA LTIKMLAYVF
61 LSPLAAALTE AMDRRRVLVT LDLVRAAAAA CLPMVTEIWQ IYLLIFVLQA ASAGFTPAFQ
121 ATIPALLPEE EDYTKALSLS RLTYDLESLV SPALAALLLG LVSFNALFLG TALGFVGSAL
181 LVISVALPKP GASRTGGLAT RSLRGLRLYL SIPRLRGLLA LNLGVAMPGA MVLVNTVVLV
241 KSELGGSDRM VALALGAYGG GSMLAAFALP RLLARLGDRP IMLAGGAAMA LTGLALALWV
301 ALAGLSAPPL LLAWFVSGIG FASALTPSGR LLRRSAGPED LPALFAAQFS LSHACWLLAY
361 PLAGWLATIV PPQGVLTVLA LLGAIGCLIA ARLWSGAKPG DGVGDTGSAS SRTPGETTCK
421 TPISS
SEQDB ID: 3101377BU
Reference:
3101377
Name: translation initiation factor, Isotype: IF-2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: infB
Sequence:
1 MSDTDGKKTL GLRGSRPGNV KQSFSHGRTK NVVVETKRKR VVVPKPGAGK PSAGGSSPAG
61 DPSRRPAGIS DAEMERRLNA LKAAKARESE EAAQREAEEK ARAEERERRR AEQEAKEREQ
121 REAEQRAREK AEEEERQRRE AEEEAKRAAV RAAAEQEAPK AERSAERAPA AARPEGGDNA
181 RRTTDRDRER EQRQTRGKGR QDGRRSGKLT LSQVTDGEGG RQKSLAAMKR KQERARQKAM
241 GGAAEREKVI REVQLPEAIV VSELANRMAE RVADVVKELM KMGMMVTQNQ TIDADTAELI
301 IEEFGHKVVR VSDSDVEDVI SDIEDAEEDL KPRPPVITIM GHVDHGKTSL LDAIRDAKVV
361 AGEAGGITQH IGAYQVKTDG GATLSFLDTP GHAAFTSMRS RGAQVTDIVV LVVAADDAVM
421 PQTVEAINHA KAAGVPMIVA INKIDKPEAN PTKVRTDLLQ HEVVVEAMSG EVQDVEVSAK
481 TGEGLDELLE AIALQAEILE LKANPDRPAQ GAVIEAQLDV GRGPVATVLI QKGTLRQGDI
541 FVVGEQYGKV RALINDKGER VSEAGPSVPV EVLGLNGTPE AGDVLNVTST EAQAREIAEY
601 RAQVAKDKRA AAGAATTLEQ LMAKAKADEN VAELPILVKA DVQGSAEAIV QAMEKIGNDE
661 VRVRVLHSGV GAITETDVGL AEASGAPIMG FNVRANASAR NTANQKGVEI RYYSVIYDLV
721 DDVKAAASGL LSAEIRENFI GYANIKEVFK VSNVGKVAGC LVTEGVARRS AGVRLLRDNV
781 VIHEGTLKTL KRFKDEVAEV QSGQECGMAF ENYDDIRPGD VIEIFEREEV TRTLT
SEQDB ID: 3101377BUA
Reference:
3101377
Name: hydrophobe/amphiphile efflux-1 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSALFISRP KLAFVISLVL TILGGIGYLV LPVAQFPDIT PPVVSVSANY TGANAETVEN
61 AVAAPIEAQV NGVDDMLYMT STSADNGSYS LSVTFEVGTD PDIASVNVQN RVAQALSSLP
121 SEVTNSGVVT QKSSTNMLMV VTLTSPNDTY DSVFLSNYAS INLKDALARV QGVGKADVLT
181 DLQYAMRMWM DPDKMAALSI TPGDLIAAVR EQNLEVSAGQ IGAPPAPEGQ TFQYTIKSKG
241 RLSTVEEFEN IVIRTGAAGA VVRVRDIARV ELGAQFYSAS GYYQGKPATV LGIYQAPGAN
301 ALAVSERVTA ELERLSRAFP EDVDYEIPFN TTDFVEQSLN DVVTTLMLTF VLVVSVVFVF
361 LGNWRATLVP AVAIPVSLIG TFAFLLAFGM SLNTISLFAL VLAIGIVVDD AIVVVENVER
421 IIAEEGLSPP EATRKAMGQI TGPVIATTLV LLAVFVPVTF MPGITGRLYS QFAVTISVAV
481 AISSINALTL SPALCGLVLR ARSGPPKGVL ALFERGIGGV RDGYVALVRK LLILPVISLA
541 IVAAIGAGAG GIFSNTSKGF LPLEDNGYLF VDVQLPDAAT LGRTETVTQR LNDKLQQLDG
601 VANTVLVNGF SMLNGLSPNG AMIIVNLTNW DQRQDPELSA DALLKRILNI AWGESAASIV
661 AFNPPPIQGL GMSAGIEMEV QQTGGGSAQD LAAAVGSLVY AANQRPEIGQ SYTTFRANVP
721 QLFVDLDREK AKTLQVSVAE VFQTMQAHLG SYYINDFNLF GRVYRVMIQA EGSYRDKVED
781 IGNLYVRSQQ GQMVPLGTLI DVENVLGPVL LKRHNLFRSA TVTAVPAPGL STGDAIQVMT
841 EESANALPPG YAFEWTGSAQ QQLSSGGLVA VILGLAVLFA YLFLVGQYES WSMPVSILLS
901 VIVALFGAVA AVAVVGSDIN LYTQIGMIML VGMASKNGIL IVEFAMEQRA KGLSIREAAA
961 EAAHQRFRAV MMTALSFLLG VVPLLTANGA GAASQKAIGV AVFGGMLAAT VIGVVLVPVL
1021 YAVMQGARER IKGSSDAPAP AE
SEQDB ID: 3101377BUB
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLEKITRYLH CRREIVPTRP RTAPVPTAYR IRRKRFSMQT GPLSFSKRLH WIPAMALAFG
61 LNTVQLDAQQ AAPKVSVAAA YSKEITEEAV FIGRGEAIDK VDIVARVSGF LDEQLVEDGS
121 TVAEGDLLFR IEPDLYQAVL EARRADLDKA EANLELAGVE LARKEELLRR EATPASEVDI
181 ARANELVAEA AVKSAKAAIR QAELDLSYTE IDAPFAGRLG RVATSVGDVV GPANPPLVTL
241 VRETPIHVTF ALNEKRLVDV LQQLGETAET LAESQRSPEV HVTLPNGTPL GETGRLVFVD
301 NRIDPLTGSV VMRAEFANTG RLIVDGAFVH VRISALKPTL RVLVPQAALQ RDQRGDFVLV
361 VNDKQMVEQR YVTLGDTVGT AAIVLEGLRE GESVIVEGLQ RVRPGVAVDA VVAAEQPGE
SEQDB ID: 3101377BUC
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQNAAGRHF VFVLDEGFTM QAFSSAVEVV RLLERVRPGT GYRYNALSLS GGPVAASNGF
61 RLIPDLAAEA VPPRAVIVVV AGVRAGHSAE PALAARLRGW ARRGHPVWGI SSGVVRLAQA
121 GLLEGRRVAA HWEDVAYLRD SHPRVQVTAS LFVSDGEVMT CAGGGAASDM MLTVLRRDLG
181 GEIADEIAAR LVIDAVRGGG TRQRRALDMR FETRNRVAFA ALRLMRANLV PPLPIAAIAR
241 AQGVSERQLE RVFAREFGKT PSALYLDVRF QDARAEVRDS RRSLTEIALD HGYSPAGFAR
301 GYKRLFGLLP SEDRRQAMSD EIT
SEQDB ID: 3101377BUD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPLIMVAP NGARRGKADH ARLPITLDEM LAEASACRAA GADALHLHVR NADGTHSLDA
61 GRYREALDEL ARAVPDMAVQ ITTEAAGVYS PAEQYACLDA LRPPWASVSL REIARDPDLA
121 PRLYALAADQ GIRLQHIAYD RADLELLARS RAAGIIRAEQ DEVICVLGAY APPRAGRPED
181 LDALAPALVG LRLGLCAFGA QEQDCLLDGA RAGAEILRVG FENNLLSPDG TPWPDNAAAV
241 ASLGHHLERK AA
SEQDB ID: 3101377BUE
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHVFPRHCH AQLPIAVGGE GCYLIDSTGK RYFDASGGAA VSCLGHSNDR VKQAIKDQVD
61 RLAFAHTGFF TSDPAEELAD LLIANAPEGI ERVYFVSGGS EAVEAAIKLA RQYYLEVGQP
121 ERRHLIARRQ SYHGNTLGAL AAGGNAWRRA QFDPLLIGVS HIAPCYEYAE RAAGESLVDY
181 GRRAADELEA EILRLGPDTV MGFIAEPVVG ATLGAVAAVE GYFSRIREIC DTYGVLLILD
241 EVMCGMGRTG HLFACTGEGV RPDIVTIAKG LGAGYQPVGA MLCSGAIYDA VASGSGFFQH
301 GHTYIGHPVA TAAGLAVVQE MLEHDLPARV QALGGAMEAA LRSRLDQHPH VGDIRGRGLF
361 WGVELVADRA GKTPFDPGLG LAGKLKRAAF ARGLICYPMP GTRDGRNGDH VLLAPPFIME
421 EADATLIAER LTAAMGDVLP
SEQDB ID: 3101377BUF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAFVANCARL AQSCGEYVMI RTVSGLVALG LLAACNNPIR PLPANLADQK PACASGDYSV
61 CSEIGHAVRD QEGGVNTYPI AQTPTTYVIS QPIID
SEQDB ID: 3101377BUG
Reference:
3101377
Name: Met-tRNA synthetase, Class: EC6.1.1.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metG
Sequence:
1 MARILITSAI PYINGIKHLG NLVGSQLPAD LYARYQRGRG NEVMFLCATD EHGTPAELAA
61 AKAGKPVAEY CAEMHGVQAD IARRFGLSFD HFGRSSSAQN HKLTQHFAGK LAENDLIREV
121 SERQVYSNAD GRFLPDRYIE GTCPNCGYDK ARGDQCENCT KQLDPTDLIE PRSAISGSTD
181 LEVRETKHLY LRQSALKDQL DAWIDSKADW PVLTTSIAKK WLHDGDGLQD RGITRDLDWG
241 IPVKKGEQDW PGMEGKVFYV WFDAPIEYIA CAGEWAEAHG KSDAEWERWW RTDKGADDVR
301 YVQFMGKDNV PFHTLSFPAT LIGSGEPWKM VDHLKSFNYL NYDGGQFSTS QGRGVFMDQA
361 LEILPADYWR WWLLSHAPEN SDSEFTWENF QASVNKDLAD VLGNFVSRIT KFCRSKFGEE
421 VPEGGAYGPQ EEALIAELTT RLRAYEGHME AMEVRKSAQE LRAIWAAGNE YLQSAAPWTL
481 FKTDPVQAAA QVRLGLNLIR LYAVLSAPFI PAASARMLEA MQTSDDNWPV DIATALNALA
541 PGHAFTVPEV LFAKISDEDR EGWQQRFAGV RS
SEQDB ID: 3101377BUH
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTVISFAAL FLSVILLQLS TGGVGPLDAI SGLVLNFSKA QIGMLGSAHF FGFFIGCWWA
61 PRLMGSVGHS RAFAACTALG AMGLIGHTLT ENPYAWAVMR IASGICVAGC YTVIEAWLNA
121 KLTNEIRGRA MGTYRIADSG ASLCAQLIIA VLPPASYVSY NLLAVLCCAA LLPLTLSKAS
181 QPETPDAPRL RPGLAWFCSP LAVAGVIVSA VSSASFRMVG PLYGQEVGLA VNQIAFFLAA
241 FVLGGVAAQY PIGWLADKYD RRWVLIWISV AAMASCGVIA AAGGTGTLGV MLAAGLFGFT
301 SFPIFSISAA HANDFATSEQ RVELSAALMF WYALGAIAAP YLASNLIEGF GPPALFALIA
361 LAHLLLIGFG LTRMRARPTP EARTNYVFAP RTSFTIGRLQ KRSREGRE
SEQDB ID: 3101377BUJ
Reference:
3101377
Name: tyrosinase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGTRKDIAK LNGPWSDEML WYARAVRALQ GRAPADRTSW WYLAAIHGID IPGWVQQGIV
61 PSAGTLPPQG EQDLIFNQCQ HAGWFFLPWH RGYLAAFEAI LDAWISAQPG GPQDWALPYW
121 NYLSDSNPNG RAIPPEFLDP TLPDGSANPL SQVRRNGMHV LGPQPWFPGD ISLSAQTRSL
181 PFTAAPGTEG YGGAISGFAQ QGSLTGAVEG DPHNRVHVMV GGVQPVPGWM SDPDFAALDP
241 IFWVHHCNID RFWAAWMSDP ANQQEDSGAW SNGPFPRQFL MPNPAGGGNV FLPGETLPGG
301 ALAPAYDDLH DGTGIPQVVA GGPVTEGVMI TSKQAGGSAL LGSNSAPLTV AAGPAATEIA
361 IPATAATEFA APPGLGPEPR LYLNLEGVRG AAAAGVLQVH LRLPGADGGL RLVDTVALFG
421 LGKASSTEGV HAGNGLSLAI DITELAREVQ SAAPGALERL SVELSQPGAP ETEITVERVS
481 LYRQDMG
SEQDB ID: 3101377BUK
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPARPRAAR GLHVARRLRA AGAHLRLGPM PWLLALAATA LGVSRLLPAG DGLAALCGRL
61 SLVQLADPAA RALVLPAPGL LVGGWVLMVL AMMPPLVSAP LAHLWQTTPR SGRAVAVALY
121 GLAYLGVWIL AGLALVPLAL LLASGSAALP LLLGAALIWS ASPPAQAARN RCHRMRWLPA
181 GRARAARAAL GHGLAHGGAC LAACWPWMLV PLTVQTGHGV AMVLVAAYLL AERGMQAAPA
241 LWRVPPGIVA FNGLLPPGMR RITGLRRFGP GLMSDGFAEI PPQPRTRP
SEQDB ID: 3101377BUL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPSEPEIP QETPQLKLLR RMVMALTAVM IGGVLVTFAL IVIRLSDRTP TLPDQVELPD
61 GARAVAVTIG SNWFAVVTED ERILIFDKTT GKLRQTVTTD
SEQDB ID: 3101377BUM
Reference:
3101377
Name: ribosomal large subunit pseudouridine synthase, Isotype: D, Class: EC4.2.1.70
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rluD
Sequence:
1 MQSTRLEFVI AAAPPPRLDK ALSRDVPETA ALSRTRLARL ITEGAVSVDG QVVTDPKARV
61 VEGAQVAIAL TEAEESHIAP EAIPLVVVYE DDDLIVIDKP AGMVVHPAPG TPSGTLVNAL
121 LAHCGDNLSG VGGVKRPGIV HRIDKDTSGL LVVAKSDAAH HGLAAQFAAH SAERHYTALC
181 YGVPDGSDPR LRGVKGASFE PGNILRLTTQ LTRHPTDRQR QAVVFHGGRH AVTRARVVES
241 FGQPAAVSLI DCWLETGRTH QIRVHMAHAG HGLLGDPVYG GRRKLSPRAL SPEAVDAIGA
301 FPRQALHAAV LGFEHPLSGE KLSFSAPLPD DLERLLEVLR RT
SEQDB ID: 3101377BUN
Reference:
3101377
Name: RNA polymerase sigma32 factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoH-2
Sequence:
1 MANYTTLPAP TPEGGLNRYM QEIRKFPLLE PEEEYMLAKR WVEEQDAESA HKMVTSHLRL
61 AAKIAMGYRG YGLPQAEVIS EANVGLMQAV KRFDPEKGFR LATYAMWWIR AAIQEYILRS
121 WSLVKLGTTS AQKKLFFNLR KAKAKIGALE EGDLRPENVA RIAHDLGVSE DDVISMNRRM
181 SGGDASLNAT VGSEGEGTMQ WQDWLEDEDA DQAADYEARD ELEARRELLA SALDVLNERE
241 KDVLTQRRLL DQTVTLEDLS AQYNVSRERI RQIEVRAFEK LQKRMRELAR EKGMLIPA
SEQDB ID: 3101377BUP
Reference:
3101377
Name: renal dipeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRVVKWAVR LLALAVVAGA VVFFGFLPAY VEDTSNNVID HAPYPVSERA AALHKELIVG
61 DWHADPLLWS RDLSQRGKRG QVDVPRLIEG NVALQVFTAV TKSPAGQNYD SNSAEAFDNI
121 TLLAVGQLWP LRTWTSLRER AIWQAEKLHR VEAQADGRLK IIKTAADLED VLAAKARGEA
181 IVGGILGIEG AHPLEGELAN LDPIFDAGHR VYGLQHFFDN ELGGSLHGEA DTGLTEFGRA
241 VVAELARRPV IIDLAHSSQQ VARDVLAMTD MPLVVSHGGL HGHCPVKRNF PDDLMREIAA
301 TGGVIAMGYW AEVACDDITP TGIARMIVKA IETVGADHVS LGSDFDGSVE TAFDTSELAA
361 LTSALLDAGV AEDQIRKVMG ENMVRVLRAR LR
SEQDB ID: 3101377BUQ
Reference:
3101377
Name: C4-type Zn finger protein, Isotype: DksA/TraR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGGWARDGA VSEQIEASIS DELARLKARK APVGESLTHC AECEEDIPEP RRQAIPGVKL
61 CLDCQQERDS AFKTRGGINR RGSKDSQLK
SEQDB ID: 3101377BUR
Reference:
3101377
Name: DNA modification methyltransferase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFGHPQGKT RAVIERIETI DHQTYFEPFV GMGGVFSHRT WRPRLEVVND LNGEHVFLLC
SEQDB ID: 3101377BUT
Reference:
3101377
Name: oligoendopeptidase, Isotype: F, Class: EC3.4.24.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pepF
Sequence:
1 MFHLPFPLRD ANAGSGSKEL GNLPEWDLSD LYSGEDAPEL AHDLDWLETE CAAFAADYEG
61 KLAELDAAAL LTCVQRNEKI SAIAGRIMSF AGLRYYQLTI DAGRAKFMSD CQEKITNFTT
121 PLVFFTLELN RIEDDALTAR FAENADLARY APVFRRIRAM KPYQLSDELE KFLHDLGVVG
181 DAWERLFDET IAGLTFDIDG EELNIEGTLN LLTEQDRSKR EAAAHELARV FGENIKTFAR
241 VHNTAAKEKE VIDRWRKMPS AQTGRHLSND VEPEVVEALR EAVVAAYPKL SHRYYELKRK
301 WLGLDRMQVW DRNAPLPMED TRTIPWAQAE RMVMEAYEAF DPRMGEIAAP FFSKGWIDAA
361 VKPGKAPGAF AHPTVTEVHP YVMLNYLGKP RDVMTLAHEL GHGVHQVLAA GQGEMLSSTP
421 LTLAETASVF GEMLTFRKML EKAETQEQRK VLLAGKVEDM INTVVRQIAF YDFECKLHAA
481 RRQGELTPEN IGDLWMSVQG ESLGPAFDFM EGYESFWAYI PHFVHSPFYV YAYAFGDGLV
541 NALYSVYAEG AEGFEEKYFD MLKAGGSKHH KELLAPFGLD ASDPKFWDKG LSMISDMIDE
601 LEAMEG
SEQDB ID: 3101377BUU
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLTPAPLFE DVAGGPAGGA AHWMQTSDGL RIRAGHWRPE GEVRGTVLMF PGRTEYVEKY
61 GNAAQAFVTR GFAMLAVDWR GQGLADRLLE DRRLGHVLEF TDYQRDVAAV VELATTLDLP
121 RPWFVVGHSM GGAIGLRAVM EGLPVAACAF TGPMWGIFFT PVMKPLSWIT ANLAPAIGMG
181 HKHPATTTLE PYVQAQEFEG NSLTRDPAMY EMMRSQLAAH PELALGAPTN IWLREALAEC
241 RALSDRPSPD LPCLTFLGSH EQIVDRKAVR ARMARWPRGE LVEIPDGEHE VLMEAPEVRD
301 PAYDRMAALF SAPDQLQRSA
SEQDB ID: 3101377BUV
Reference:
3101377
Name: sterol carrier family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTLEQAAA ELNEKLAGAG FDASAKFAIA DMGAIVLDGS GARISDEETD VTLSADAETF
61 QQILSGEMNP TGAFMSGKLT IDGDMGVAMK LASVLA
SEQDB ID: 3101377BUW
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIALTAKLKD IVAALWLISA ISGGVSAQEV EPSDETVLLE ELAGADPMRA RQIDRELQAL
61 WAQSGSASAD FLLKRGRDAL EVQDIRAAIE HLTALTDHAP DFAEGWHARA SAYFAADLYG
121 PAVADLERAL ALNPNLYDAI FGLGLIFEAL ERPQTAYAVY TRALAIHPHH EEVTSALNRL
181 KPRIEGQAL
SEQDB ID: 3101377BUX
Reference:
3101377
Name: helicase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGSSRIVAV LGPTNTGKTH YAIERMLGHR TGVIGLPLRL LAREVYDKIV ALRGPSVVAL
61 VTGEERIVPP RTQYWVCTVE AMPEGLGADC VAVDEIQLCA DPERGHVFTD RLLRARGLHE
121 TLLLGSDTMR GPIAALVPEA QFVRRERMSQ LVYTGSKKIT RMPPRSAIVG FSVENVYAIA
181 ELIRRQKGGA AVVMGALSPR TRNAQVDLYQ NGEVDYLVAT DAIGMGLNLD IDHVAFSALS
241 KFDGRRMRPL APNELAQIAG RAGRGMASGT FGVTGEARPL DEGMAQAIME HRFTPLKKLN
301 WRNSALRFNS VDALISALEE APSGEHLLKA READDLRTLK SLAGEAEVLA RASDGASVRL
361 LWDVCRIPDF RGISHAEHAG LLQVIFGHLH ERGAIPDDFM ARQIRRIDRT QGDIDTLSKR
421 LAYIRTWTYV AQRNGWVRDE SHWRGETRAV EDRVSDALHE RLTQRFVDRR TSVLLRRLKQ
481 KEALLAEVND KGEVTVEGEF VGRLEGFRFM PDKSAQGAEA KALKSASLQA LAPQFHLRAD
541 RFYNAPDTEI DFTEQGGLMW GEYAVGKLTV GADPLKPQVE VFVDEAAGPD VEQKVQRRLQ
601 HFIDRKVAAL FEPLLALSRD EALSGLARGF AFRMVENFGI LPRADVAQEV KDLDQEARGA
661 LRKHGIRFGQ FTIFMPLLLK PAPTRLRLVL WSLTKGLSEF PEAPPPGLVT VPSVKDAEPG
721 VDTMCGYRIS GERAIRIDML ERLADMLRAK DSRSGFEATA DMLSITGMTL EQFADLMQGL
781 GYKAERGERA KVKPAPVEAA AEGEPAPEEG AATEAAPAAE VAEAEPAPAE TAEAAAEAPA
841 ETAETTEAAA DATEADPEIE VFFTFTWARP ARQQQGRGPR REGGRGQPGQ GEGRAKDRPR
901 GGKPQEGGRR RDGKPQGGKG GKPGQQGAKT YSSRPPKKEK AIDPDNPFAA ALMGLKEGN
SEQDB ID: 3101377BUY
Reference:
3101377
Name: S4 domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEAPTRLRI DKWLWHARFF KTRGLAAEVA GSGRIRVNGN RVSKPAHAVG PGDVLTFGQG
61 RQVRVIRVEA LGTRRGPATE AQTLYTDLDA GRNDALPDET
SEQDB ID: 3101377BV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRGGAHKDR TEGPERKCIA TGESQPRFGL IRFVAGPDGQ LVPDIAGKLP GRGTYVAADR
61 EALQKAVDKK LFARGLKQQV QVPDGLVDEV ERQLIRRVVD LLSLARKSGD AVSGYEKVKT
121 WLDKEEAQVL IQASDGSGRG KTKLSTPHFG KYIGWLTADE LGMAFGRQTV IHAALASGGL
181 AKRVVEEAQR LRGMRKTDDG GKGRAEG
SEQDB ID: 3101377BVA
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYVVTENCI ACKYTDCVEV CPVDCFYEGE NALVIHPDEC IDCGVCEPEC PADAIRPDTE
61 PGMEQWVEFN RKYSEMWPVI VTKKDPLPEA EERDGESGKM EKYFSEAPGE GG
SEQDB ID: 3101377BVB
Reference:
3101377
Name: transcriptional regulator, Isotype: CarD-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKSKKLEFR PNDYVVYPAH GVGQILSIEE QEVAGFKLEL FVISFEKDKM TLRVPTNKAT
61 ESGLRSLSSP DVISQAMKTL KGKAKVKRAM WSRRAQEYEQ KINSGDLISI AEVVRDLHRT
121 DDQREQSYSE RQLYEAALER LTREVAAVSG ADEMAAAKQV DEVLTSRAA
SEQDB ID: 3101377BVC
Reference:
3101377
Name: cation channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHTVKAAVRK LYVGRDPGSV RFRYGLIVFD LSTILFFIAT AHLPHGPVLT ALSVVIGFVI
61 LCDFSARLWI AKRRREFLTR IYTIADIIVI LSLLLDPFLT QSLAFLRILR GLRLIHSYHL
121 LHDLRRDSQF FRTHEDAIVA AVNLLVFIFL TTMAVLVFFI PPGSRETPYI DALYFTMATL
181 TTTGFGDITL GTPAGKLFSV FVMVVGVALF VRLAQAIFSP QKVRYRCPDC GLFRHDPDAV
241 HCKHCGGLLN IETGGAG
SEQDB ID: 3101377BVD
Reference:
3101377
Name: cobalamin 5'-phosphate synthase, Class: EC2.7.8.26
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKNDIADIS PRDPMLALVL LTRLPLPALP EAAFARQAAA VWAFPLAGLA VGALAWATGA
61 LALAAGLAPV AVAGLMLVVL VMTTGGMHED GLADTADGLW GGFTPERRLE IMKDSHIGTY
121 GVLALILSQG LRLAALSALV AGGALGAAVA AAVWSRALMP VLMAALPNAR GTGLSQSVGR
181 PTPQAVTLGL GLAAVLALLL AGWAVLIPAL LAVLSVLGLA ALARAKIGGQ TGDILGAAQQ
241 LAEITCLLAL SAAL
SEQDB ID: 3101377BVE
Reference:
3101377
Name: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, Class: EC2.4.2.21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobU
Sequence:
1 MLPALTDLAQ FRDLLGAAPG PDAAARAGAE ERNGQLTKPP GALGRLEDLA IWYAGWRGDA
61 RPRIEAPQVI VFAGNHGVTA QGVSAFPAEV TVQMVMNFEH GGAAINQLAR AAGARMDVHA
121 LELDRPTQDF TQAPAMTGDE LLAALQCGWA AVDPAADLLV VGEMGIGNTT PAAAIAHALF
181 GGAAGDWTGR GTGVDDAGLA NKTRVVAEGV ALHTSRDGLE VLRCLGGREI AAMAGAIAAA
241 RQLRIPVILD GFICTAAAAA LAAVAANALD HTVAGHQSAE GAHAVLLAKL GKAPLLSLGL
301 RLGEGSGGAL AINILKSAVA CHSGMATFAE AGVSDG
SEQDB ID: 3101377BVF
Reference:
3101377
Name: glutathione-regulated K-efflux system protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MESFLYQATI YLAAAVIAVP LAARLGLGSV LGYLAAGLII GPVLGLVGAE TADLQHVAEF
61 GVVMMLFLIG LELEPRALWD MRDKLLGLGG LQVGVSTLAI MVVAMVAGQP WSVALAVGLT
121 LSLSSTAIVL QTLSEKGLMQ TNGGRATFSV LLTQDIAVIP ILAFLPLLAS APVAHFAGDG
181 SINRVHKAGA GHEASLSLVE GLPGWAVTLV TIAAVAFVVL AGIYLTRPLF RFIHASRLRE
241 MYTALALMIV VGISFLMTLV GLSPALGAFL AGVVLANSEF RHEMESDLEP FKGLLLGLFF
301 ITVGAGIDVG FFLADPLDLI GLALLVILFK GVILYIVGRA FQLKGRDRWL FTLGLAQAGE
361 FGFVLLAFST QQNVIPAHLS QKLLMIIALT MMITPLLFIL YELLSRRMRD HVADMVPDTI
421 DEQGPVIIAG IGRFGQIVNR LVTASGFKTI VLDHDMETIQ LMRRFGVKGF LGDPTRPELL
481 KAAGLAKAQV LVAALDDDNQ VTKLVAYARR QRPDLHIIAR ARDRNHVYEL YRAGANDIVR
541 EMFDSSVRAG RYVLENVGLS EYEAAQAAQT FYHHDRQAVR DLAEVWDPNI PTADNKAYVE
601 RSQALQKDLE TALMELSEEL ASRRSA
SEQDB ID: 3101377BVG
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDSMDLRLL DALQKDAHLT AQQLGEMLHL SSSQAGRRRQ RLESEGYITG YAAKLDPLKL
61 GLHVQGFIQV HLGTHGPDQS AKFARMVNSR PEITSAWTMT GEADYLLHVY CADLPALNRL
121 LHEVILPHPA VARVQSQIVM DQLKRDAPLP T
SEQDB ID: 3101377BVH
Reference:
3101377
Name: 4-hydroxyphenylpyruvate dioxygenase, Class: EC1.13.11.27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hppD
Sequence:
1 MGPFPHNAPK SEITPENPAG TDGFEFVEFA HPEPQVLRDL FARMGFDMVA RHKDKPGIEL
61 WQQGDVTYIL NAEKGSFAEK FIELHGPCAP SMGWRVVDAQ AAFDHAVKMG AEPYEGDDKT
121 MDVPAIKGIG GSLLYFVDQY YDTSPYNTEF EWLKQSKPRG DGFFYLDHLT HNVYKGNMDK
181 WFKFYGDLFN FREIRFFDIQ GKFTGLFSRA LTSPCGRIRI PINEDRGETG QIVAYLKKYN
241 GEGIQHIAVG TDDIYDSVDA IAAKGLKFMP GPNEAYYDMS YDRVSGHDEP KDRMMEHGIL
301 IDGEGVVDGG ETRILLQIFS KTVIGPIFFE FIQRKGDDGF GEGNFKALFE SIEREQIESG
361 EIEAAE
SEQDB ID: 3101377BVJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPAFALSLS FEGITLLHRA AGGWRQVGAV ALDAPDLAAA LRKLRQDALR LEPDIRCKLI
61 LPNEQIRYLT VETGPFKGEA RHALIEKEVG TATPYALEEL AYDTSPDGEL THVAAVARET
121 LNEAEAFATE HGFNPVSFVA APGDNPFLGE PFFGPSSTTA ESTGAEAVEP DGIAVVVIGP
181 AVFPDTEPPA APAAPPVSFS SRRTKATGEM SEDDPAPAPP PVAPAVTEEP DVPAPVAEAP
241 EAPEPEAAVQ AAVASEFASR RTLAPDAPRP ILDEMPVTAF AAAERPQQVP RTEADRLTIF
301 GARSGGIGGK PRYLGVMLTV GLLLFLAAVA AFASLFSPGG LTGLFRDPDP LAEPPAAAVE
361 APAPTPETAP EQVAPPTPAS IDEDPEDLVA PQDVPELPGL SGTDSAVLEA LRTDPQQVED
421 LDYEPEPSGT QATELALSEA PEPPEVPGLI GLNDLFVASI DRTDLFQDAV ALPPVAGFDT
481 DAAPDGSAPS STPGQSFDLD TRGLVEASPE GTLNPDGVLV YAGRPVKVPP APPVRFEAPP
541 EVDVAQERLA SVRPKLRPGD LVEQSERSQF GGRSLSELAG LRPKARPVSL QEQLAEQQEA
601 DPEEAGTVSP LAVASARKPR LRPEKLAAAA AAAAASSQGN LGSTAGLNRS ADADDSGSFT
661 AATVKPKAPS PTSVARQATL DNAINLRDLN LIGVYGTPAN RRALVRLPSG RYKKVKVGDS
721 IDGGRITAIG DSELRYQKGS RNLTLKIPSG
SEQDB ID: 3101377BVK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRRFGFRRL RCLGDRRRHV RFFRYRWRDR RRRGRGVVLG HLPGRLGPAA GEADRWCGGG
61 GGRLGVGEHR RADHHHGDSV RFDRLGAGAF GGGAAWPEKG FSQERVVAGR GHEADRVEPV
121 FGGKGLGLVQ GFARNRGHMG QLAIGRGVIG QFLQRIGGGG ADLLFDQGVA SLALERSGLD
181 GQIADLFVGQ DQLAADIGFQ PQRVLAQLAQ RRRQIGRIQR HRPHLPPATG GTMQERDPLE
241 GKRQRKGGFH VTRLTVPEWL GAPAGAHHDG TLKQRIAEGK KNTGFPLAAR HAATPSLRVR
301 IAGEHK
SEQDB ID: 3101377BVL
Reference:
3101377
Name: outer membrane protein, Isotype: 28kD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: omp28
Sequence:
1 MRILIFLVAA LLFAAVGLAR ADEQPGHITV TGSGTIETVP DMAVITLGVT HESQEARAAL
61 LATSEAVQQI FDRLGEMGVD VRDMQTNDLS LSPLWSNRAS SSEPPKITGF QASNRVTVRV
121 RDLAALGGIL DAVVSDGANT FNGLEFGVKE PKPLRDLARA KAVADAQDRA RQLAEAAGVK
181 LGRVVSISEL PHDPQPRPMM RMAAMAESMD VPVAGGEIGL SGSVTMVFEI RQ
SEQDB ID: 3101377BVM
Reference:
3101377
Name: antibiotic efflux protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAPLVIRNR NFRLLFTAGA LTNLGDGVLV LAVPWLAALM TRDAVAIAAV AAAARLPWLL
61 FALPAGVIID RSDRRKLIAR ADLMRAGIVL AILLLALGDP APGAIWALAG LAFLLGSAEV
121 LRDNAAQTIL PALVDPDDLE AANGQLWSTE QLTGQFIGPP LAGVLISAGI AVPFGLDVAV
181 LVLAAGLVWL ISLPPQVPSR ARFAQALAEG IAFMRGDALL LRLAVVLGLA NFIAMATITV
241 QVLFAQEVLG LGAAHYGMVL SAGAVGAICG SLLAPRAMRL IGTQACLFLS IAVWGAGYAS
301 IGLSNSGWVM GLALTAIMAA AMLWNVITVS WRQRRIPPAM LGRVNSIYRF FGWGSMPLGA
361 LAGGALVVLA EQQMSREMAL RAPFLLAGLC CLALLIYALA RLRLE
SEQDB ID: 3101377BVN
Reference:
3101377
Name: Hse(Ac) aminocarboxypropyltransferase, Class: EC2.5.1.49
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTPNYGFD TLQIHAGARP DPATGARQTP IYQTTAYVFR DADHAAALFN LQEVGYIYSR
61 LTNPTVAVLQ ERIATLEGGV GAVCCSSGHA AQIMALFPLM GPGCNVVAST RLYGGTVTQF
121 SQTIKRFGWS AKFVDFDDLD ALREAIDDNT RAVFGESIAN PGGYVTDIRA VADVADAAGV
181 PLIIDNTSAT PYLCRPFEQG ASLVVHSTTK YLTGNGTVTG GCVVDSGRFD WSASDKFPSL
241 SAPEPAYHGL KFHETFGPLA YTFHGIAIGL RDLGMTMNPQ AAHYTLMGIE TLSLRMQRHV
301 ENAKQVAAWL EADPRVDYVT YAGLPSSPYA ERAERCYPKG AGGLFTFAVK GGYEACVKLV
361 NALEIFSHVA NLGDARSLII HSASTTHRQL TPEQQEAAGA GPNVVRVSIG IEDADDLIAD
421 LDQALTKATA
SEQDB ID: 3101377BVP
Reference:
3101377
Name: rhodanese domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQKITKGIK TLLAEANAQV ATLPVAEAKA LYDDPDHVFV DLRDIREVQR SGMIPGAFSC
61 PRGMLEFWID PDSPYHKPVF DQDKTYVFYC ASAWRSALAA QAAQEMGLTP VMHLEGGFSA
121 WVKQDGPVAE KT
SEQDB ID: 3101377BVQ
Reference:
3101377
Name: oxidoreductase, Isotype: aldo/keto reductase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTRPLGRTG IEVSALCLGT MTFGSQTSEA DSHAQIDRAL AAGITFVDTA EMYPVNPVSK
61 ETVGRSEEII GSWNRANPAR RGDYVLATKH SGAGMAHFRD GAPISGQTIA GAVEGSLKRL
121 GTDHIDLYQF HWPNRGSYMF RQNWRYDPSG QDTGAVLENM ADCLEALQRE VDRGTIRAFG
181 LSNESAWGTA QWLRLAESGQ GPRVASMQNE YSLLCRLYDT DMAELSVNED VGLMAFSPLA
241 AGFLTGKYQR GAVPEGSRMS LVPEMGGRKS ERVFDAVAAY LDIAQRHGID PVHMALAWCQ
301 TRPFMMSAIF GATTLAQLDH VLAGADLTLS DEVLDEIARA HKAHPMPY
SEQDB ID: 3101377BVR
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKSAKNILQ PEHRALKCAL LVLDDCNTLS FAAAVDPMRA ANRLADRHAF DWDYVTATDA
61 PARLTCGLMV PGLPLARLEG CDLLIVVAGF QLARHATPSL LAGLRRIAAG GATLAGIDGG
121 PWLLAEAGLL DGHAATTHWE DLDNFASRFP AIDVRHDRFA VSGNRLTSGG AMPAIEMMLH
181 IIAARHGAGF AARVAGLFLY EGAPQPGTPQ RRTGAPHRHN KLTARANALM EAALDEPLSL
241 AEIAETLGTS PRTLQQQFRL RLGTTPQDHY LQLRLAEARR LVTDTDMPLM EVAQATGFTS
301 QSSFARAFRT QNGQSARDLR QARTQPAAS
SEQDB ID: 3101377BVT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNREVFITCA VTGSGGTQDR SPHVPRSPKQ IAESAIAAAK AGAAVVHCHV RDPETGAPSR
61 RLDLYREVTE RIRDAEVDVV LNLTAGMGGD MIFGDVENPL PLRAQGTDMV GASERVAHVA
121 ECLPEICTLD CGTMNFAEAD YVMTNTPGML TAMGRMMTEL GVKPEIEAFD TGHLWYAKQL
181 VKDGVLEGPA LVQLCMGVPW GAPDDLNTFM AMVNNVPDDW TFSAFALGRN QMAYAAASVL
241 AGGNVRVGLE DNLWLDKGVL AENWQLVERA AGIVSNMGAR VIGPQEVREK LGLVKRAPVA
301 K
SEQDB ID: 3101377BVU
Reference:
3101377
Name: 3-hydroxyacyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTAAIIGGG VIGGGWAARF LLNGWDVRVF DPDPEAERKI GEVLANARRS LPGLSDMPLP
61 PEGKLSFHAD LGEAVTGAAW IQESVPERLD LKLKVYRSIQ EACDPGAILG SSTSGFKPSE
121 LQEGALRPGQ IVVTHPFNPV YLLPLIELVT TPENSPEMIE RAKEIMRGLG QFPLHVRKEI
181 DAHIADRFLE AVWREALWLV KDGIATTEEI DEAIRMGFGI RWAQMGLFET YRVAGGEAGM
241 KHFMAQFGPC LSWPWTKLMD VPEFTDELVD LIAGQSDAQS GHHTIRELER IRDNNLVGMM
301 RALKAQNWGA GAVLNKHDAA LKPKALPDLD TADLTQPILT LSRAVPLDWT DYNGHMTESK
361 YLEAFANSTD RFMEIIGCDA DYIAAGGSYF TAETHIRHLD EAHAGARIRV ETQMLLGQGK
421 KLHLFHRMYE GDKLLATGES FLLHVSLETR KPCAPSPEIE AAMARIAEAQ AGLSYPEGAG
481 SAIRKPA
SEQDB ID: 3101377BVV
Reference:
3101377
Name: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, Class: EC1.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: linC-1
Sequence:
1 MSARVLITAG AGGIGCAMAE AFDVAGARVW IADVDRAALA ACPGHWRQSV VDVADEASVA
61 AWFGEIEEAW GGLDTLCSNA GIAGPTALVE DMPLEGWRAC VSVNLDGAFL CARYAAPMLK
121 RQGAGSIVIT SSTAGQYGFP YRAPYAAAKW GVIGLAKTLA MELGPHGIRC NVICPGSVEG
181 PRMEGVLARE AAAKGMSRDQ VYAGYASGTS MGRFVEAADI ANMAVFLGSD AARLVSGQVI
241 AVDGHTVNPD PKV
SEQDB ID: 3101377BVW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRACGLPQGR LCAILVVRRS SNPQTEEPRM DTIRTAEYAR ALYAAHGDKA EAEAAQKEQH
61 SKALGNRDEA QSWQAVRRAI RQMRGANQS
SEQDB ID: 3101377BVX
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKRDRAAQF RQRLARAMEL RQATQSALAR AVGVDRSTIS QLLTDSGARL PNGHVVGACA
61 SALGVSADWL LGLSDRPESA AELLALSMTM TEAPRALVDE RIYDWHREAA GYKIRYVPAA
121 LPDMLKTRAV LEWEYAPHLG RTADQAIGAS EDRLAWMRSA QSDYEIAMPL FELESFAHGA
181 GYYRGLDPAV RREQIDHLLA LCEQLYPRLR IYLYDAKRLY SAPMTIFGPL LCVFYAGSHY
241 MAFRDRDRIE IFTRQFDTLV READLTARHL PTHLQQLREA VPG
SEQDB ID: 3101377BVY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTRQRSVVK AVVWNLLGLV TMTLVGLAAT GSAALGGTLA LVNTALGFTL YLVYERVWAG
61 IRWGRHV
SEQDB ID: 3101377BW
Reference:
3101377
Name: transcription termination factor, Isotype: NusA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nusA
Sequence:
1 MAITSANQLE LLQTAEAVAR EKMIDPGLVI EAMEESLARA AKSRYGAEMD IRVSIDRKTG
61 KATFTRVRTV VADEELENYQ AEFTVDQAKQ YMENPQIGDT FVEEVPPVEM GRIAAQSAKQ
121 VILQKVREAE RDRQYEEFKD RAGTIINGLV KREEYGNVIV DVGAGEAILR RNEKIGRESY
181 RPNDRIRCYI KDVRREPRGP QIFLSRTAPE FMAELFKMEV PEIYDGIIEI KAVARDPGSR
241 AKIAVISYDN SIDPVGACVG MRGSRVQAVV NELQGEKIDI IPWNEDQPTF LVNALQPAEV
301 SKVVLDEEAG KIEVVVPEEQ LSLAIGRRGQ NVRLASQLTG LDIDIMTEAE ESARRQKEFE
361 SRTNLFMETL DLDEFFAQLL VSEGFTNLEE VAYVELDELL VIDGVDEGTA EELQARARDY
421 LEAQAKAALD NARALGAEDS LIQFEGLTPQ MVEALAKDDV KTLEDFATCA DWELAGGWTT
481 VDGQRVKDDG ILEPFGVSLE DAQDMVMTAR VMLGWVDPTE LLEEAEETEE GETATDEEAG
541 A
SEQDB ID: 3101377BWA
Reference:
3101377
Name: fatty acid desaturase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEPRLPERA EWGTFALILA CYGAWLAVIF GLAGLSLWLA IAAMGLVAAL HSSLTHEALH
61 GHPFRYRWLN EALMALPLTL CIPYNRFRDL HLAHHLDANL TDPYDDPESN YLDPAIWSRL
121 PGWQRRLYAL NNTLAGRMVL GPLIGTACFL RDEARGALRG DRAILLAWAL HLPGMAGVLW
181 VVSLSPMPIW AFALSAYIGL GLLKIRTFLE HRAHEKSRAR TVVIEDRGLL AFLFLNNNYH
241 VVHHMNPGAP WYALPALYRA GKERYLGCNE GYSYRSYGEV FRRYFWRAKD PVPHPLWPKP
SEQDB ID: 3101377BWB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLWIPVTLA AALFQTVRFM LQKSLATVKL SASGATFARF LYSAPLALAG LLIATTAGGY
61 DLPALGARFW IFVAIGGTAQ ILATICVVAL FKQRNFAVGI TFKKTEVIQT AIVGFVILGE
121 GVSFGALGAI LLGLVAVLLL SKTPGGSGAW WRHLTNRASQ LGLGSGVLFA FSAVSYRAAS
181 LELGDLTPWF RALVTLAAVV SFQLVSMALW LWWRDRAQLA AVWATRNTGA FVGLTSLGGS
241 FCWFLAFTLQ NAAYVKALGQ VELIFSLMAS TLFFREKITT REIAGIGLLG LSILALVLAI
SEQDB ID: 3101377BWC
Reference:
3101377
Name: ATP-dependent RNA helicase, Isotype: RhlE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rhlE
Sequence:
1 MTKFSELNLN PKVLKAIEEA GYETPTPIQA GAIPPALEGR DVLGIAQTGT GKTASFTLPM
61 ITLLARGRAR ARMPRSLVLC PTRELAAQVA ENFDTYTKHL KLTKALLIGG VSFKEQDALI
121 DRGVDVLIAT PGRLLDHFER GKLLLTGVQI MVVDEADRML DMGFIPDIER IFSLTPFTRQ
181 TLFFSATMAP EIERITNTFL SAPARIEVAR QATASETIEQ GVVLFKGSRR DREASEKRAV
241 LRALIDAEGE KCTNAIIFCN RKTDVDIVAK SLQKYGYDAA PIHGDLDQSQ RTRTLDGFRE
301 GKLRLLVASD VAARGLDVPS VSHVFNFDVP GHPEDYVHRI GRTGRAGRDG KAITLCIPRD
361 EKALDAIEKL IQKDIPRLEN PARTEEKPEA KPRREEKPAR ADKPARSDAD KREPVKREAD
421 KRDPVKREAD KRDRKGGERR DRKDDRGARV VGMGDHLPSF IALSFEERRA S
SEQDB ID: 3101377BWD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRPAPRVTN SPMNTSPTWG VVATVKAPEH EILRFAAWHL ELGAHRLFLY LDDPDPAVFA
61 RLKAHPRIRV FACDDSYWQR RKLSRPVKHQ ARQTMNARHA YNRADVDWLA HIDVDEFIWS
121 ETPIAAVLSG LPDDTLCARM RPIEALAGGD ALYKAFIPGG PARDGIVRRL YPTFGAFVKG
181 GFMSHVAGKV FARTGMEKVD FRIHNIFRNK EMNPHQVELD MVDLCHRHGA DWDHWIAAYR
241 YRIAQGSYRP DLAPNVPREA GGLSMHELLS GIEEEQGEDG LRAFFDELNA CAPEGRARLR
301 AEGMLKHRPL DLDGAMQKQF PK
SEQDB ID: 3101377BWE
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHTAVITGG NKGIGADLAQ ALLARDYTVI SISRHTPEVT HPRLHSVEAD LLDPQAVAGA
61 AAQVAASHQV THLIHNAGLI WPNLIEEAEP SDITGLAQLH LGSALTLLKA FLPAMKARQF
121 GRVMFNGSRA ALGAPTRTAY GATKAGMIGM ARTWALELAP HGITVNVVAP GPILTDNFWG
181 IVEKDSPQQE ALAKRIPMGR LGRVDDVTRA FLFFCDPENS FVTGQTLYVC GGASVGSLQI
SEQDB ID: 3101377BWF
Reference:
3101377
Name: cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTLTDFATR IASGEIRVVD LTHTLDPDFP VIILPPEFGQ CARFRMEEIS AYDHRGPAWK
61 WHNITMSEHT GTHFDAPAHW ISGRDLPRAA VDEIDPADFI GPVCVIDCSD GAAEDEDFEL
121 TVPLIEGWEA VHGRIPAGAW VLMRTDWSKR RGAAYLNMRE DGPHSPGPTP EAIRFLIDQR
181 DIRGFGVETV GTDAGQGSHY TPPYPAHYYL HGAGRYGLQC LSDLDQLPPT GAVLIAAPLK
241 IKNGTGSPLR VLALVEET
SEQDB ID: 3101377BWG
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFQRRRPDQR SARMTHPLSP PPRKDPQKRS VSPTRPPEVR SRAALHLTAA AAEGRFALQR
61 CADCGKVQYP PRDACSACLS TDLPWQDMAP GGTLIAETTV QTSPRLYFRE RMPWRAGTVQ
121 LDDGPTVLAH IHGDVARHAR VRITARLDQS GQGVLVALPE TDTPNMEDDP LMRALSADPK
181 HRRVLITDAR SAQASALARA LQKAGAAIIF AGEPESWRPY PQRAELEALG VQILPMDVTD
241 TASVQKLAGE IGGKTDILIN TARFLRPGGV LDRGDTGFAR DELEVNYLGL MRLAQAFGPG
301 MCARAADGVN AAAAWVNLLS VGALSNARPF GAYSASQAGA YSLSQSLRAE FRPSGLRVMN
361 VFFGPTEEDD WYQPLPPPRV TAYALARSVV DGLQRGLEDV WCGDIAQDLR DRFRRDPKVL
421 EREMTLGGEG A
SEQDB ID: 3101377BWH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMARPASYEG VALVAPFSTP YQRYSIDTAH HWIATALRGS LRAAGLKPAD LDGFQVASFT
61 LFPDTAVGLT QHLGLCPRWL DHIPMGGASA GVALRRAARA VQAGDAEIIA CVAGDTNHID
121 SFRQLLSSFS RFAMDASYPY GYGGPNASFA LLTDRYMTEY GATREDFGRI CVAQRANALK
181 NPNAVMKKPL TMEQYLDARP IADPIALFDC VMPCAGAEAF LVMSEDRAQS LNLPYARLAA
241 AIERHNAHAD DPIQLRGGWT MDVDVLWDQA GMGPQEMDLV QTYDDYPVIS MMQIEDLGFC
301 AKGDGPAFLR DKGLTVAGDF PHNTSGGQLS GGQAGAAGGF IGMVEAIRQV TGQADGTQVP
361 GAERALVSGF GMINFDRGLC SSAAVLTSGA RA
SEQDB ID: 3101377BWJ
Reference:
3101377
Name: AMP-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRRLRQYPA AAVSAETVYA AIAATAERWP DRPVLDVLPG TAAAYGIAAG AVSYATFLAR
61 VDARAEALEQ AGYGAGMRVA ALLENRPVFF ELFAALNRIG ASIVPINPDL RAAELEYLIG
121 HAQPALIVAL PARADELRAA AMAAGVKAPV IGDEDAPPPP RANAAVTEPR EGEAREAALL
181 YTSGTTGNPK GCVLPNAYFL LAGRWYADLG GVASLTEKGE RMITPLPIFH MNAMAYSFMA
241 MVTVGGCLIA LDRFHPSSWW ADVAEARATC LHYLGVMPSI LMSLPETPED RAHQVRFGFG
301 AGIDPKLQAG FEARFGFPLI EAWAMTETGA GAVIAAHTHD RLIGQSCLGR AEGWVAARVV
361 TDTGQDAAPD EPGELLVRNA GPDPRYGFFS HYDKNPEATA EAWEGGWFHT GDIVRRDGDG
421 RFFFVDRKKN VIRRSGENIA AVEVESVLMR HPSIRAAGVA AVPDPMRGDE VFACLRVDAP
481 SPDLAQQIAE WALTQMAYYK VPGYIAFVDR LPMTPTQKIQ RKALKEMAEA LLSDPATVTL
541 THLKKRQVA
SEQDB ID: 3101377BWK
Reference:
3101377
Name: aromatic 1,2-dioxygenase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTREDVIDF IYGETRLLDE GRYTEWLDLW LPDAVYWMPL DYKQADPVNA TSFLYEDNFM
61 LRLRVERLNG ERTFSQKPKS RCHHVIQRPF VDVFDPAAGR FQTVTNMHYV ETRLDEQQLL
121 ALTVTHDLVL VDGAFRIAGK KVELLNCDAA FGNIQLLP
SEQDB ID: 3101377BWL
Reference:
3101377
Name: aromatic 1,2-dioxygenase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNADDIRAMI QPAQVHRDVY ISDAVYRLEM RHLFTNAWIF VGHDSQTPNK GDYITTQVGD
61 QPVIMVRHTD GEVKVLYNRC PHKGTKIAID RAGNTGKFFR CPYHAWSFKT DGCLLAIPLK
121 KGYEGTGLSE SQNGKGMQAV GAVYNYRGFV FARLAEDGIG FDEFFGGSLS SIDNMVDRAP
181 EGRVEISGPP LRYMHKCNWK MLVENQTDTC HPMVAHESSA GTAVKIYEQM GNPEPRPPAM
241 QIIAPFMSPY EFFEDMGIRT WPNGHGHTGV NMSIHSNYDA IPGYFEAMIE SHGEERAKAI
301 LDESRHNTVY FPNVMVKAPL TQLRNFIPLG ADRTLAESYV YRLVGAPEQL TAMSAMYNRM
361 INAPTSIVGH DDLEMYERAQ EGLHAEGMQW VDIRRLHTGP ENFETEAVEN GTTERQMRNQ
421 FHAWAKFMTM SMEDAPGVAA Q
SEQDB ID: 3101377BWM
Reference:
3101377
Name: oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: NAD-binding domain/2Fe-2S cluster binding domain
Sequence:
1 MLLLRIAQKQ AVTKRISAFT LVAAEGGPLP DHGAGAHIEV QTAAGPRAYS LIDWPERQPG
61 AWQIAVQRED DGDGGSRAMH ALNPGDTIEA TEPKNDFELR PGDMPVALLA GGIGVTPLIS
121 MATELAASGR PFVFHHAGRS AGDMAYVEQL ATIFGDRYSP HFDDTAPLDL GALMAGLSGH
181 ALYICGPKGM IEAARAAAEA AGLTDIHVEL FTNAAHAAGD SAFEVEIASS GQVITVAPDQ
241 TIIEALEAAG LDPLYDCQRG DCGICQTEVI AGTPDHRDVV LSQAERDSGK VMQICVSRAR
301 STRLVLDL
SEQDB ID: 3101377BWN
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNDTPDDTFV SGYLLYLLAA SSEEASAQFH DHIRAQGLRV PEWRVLACLV DNDAMMITRL
61 AKLSLMEQSR MTRIVDQMDA RGLVTRVADA KDKRRVRVRL TDDGRALAES LVASARAHET
121 RLLSALADTD AARIKGVLRT LLDVLDRPRE SR
SEQDB ID: 3101377BWP
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRCPDALAH RFTREEDMKH FARLVAAAIV AASTGAAAWA ADTTLRISTW LPPTHGINTE
61 IFAGLIGMME EATDGQVSGE LVFGLAPPPA QMDLIQDGAA DMAIIFHGYQ PGRFIGTKLI
121 ELPGYEGNAE AASVAYWRVH TQHLGKLGEH RGVKLVALNT HGPGQIHTSK DVASLADLNG
181 LKTRIGGGVA GDVGAALGLV GINVPAPKVY ETLESGAADA VAMNVGERVG FKLNEVAKNL
241 YDMPGGLYRG SFAIIMSQET FDSLPADVQA ALDEKVFGEP ASRMAGAAWD KSDMIAYEAT
301 RGTEGARIVE ASAEDQAAFA AIAAEVTTKV LAELDAAGVD AQAAYDMVKA EMAAN
SEQDB ID: 3101377BWQ
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMKRVLSLSV WLPGLLASAA LFVLMVMTFA DVLLRSIFNA PIEVAADLTR LLMAVMVFSV
61 MPVLSGKNAH VSVDLLDGPF RRLRLSRWRD AAVCLFCGII LFWPASRVYD LAERSRSYGD
121 VMEYLRLPLH YVGWFIALLT LVTAVVLVVR GVLLLVAPRL AGGAS
SEQDB ID: 3101377BWR
Reference:
3101377
Name: TRAP transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTASLIGFGA VLALILLRVP IAFAMGFVGM VGFMTETSFR ASISMVARLI IDTSQDYGLS
61 VVPLFILMGL FVNKGGISRE LYAASNAFLG HLRGGLAMAT IVACGGFAAI SGSSLATAAT
121 MAKVAMPEMR RFGYSDALST ASIAAGGTLG ILIPPSVILV IYGLLTETSI GKLFVAGIVP
181 GMLGILLYLC AVRWTVWRNP AAGPAGERVP LRGRLAALRE VWAVILLFFL VIGGLYGLFD
241 IPPLNINFSP TEAAGMGAMG AFLIALARRR LSLKDTLEVL LETSITAASL FAVLIGAWIF
301 SNFVNIAGLP AALSEIITAY ELRPWQVMAV ILAIYIALGC VFESLSMLLL TVPIFFPLVT
361 GLGYDPIWFG IVVVVVTEIS LITPPVGLNV FVLKGVVGDV STGTIFRGVT PFWMVDIIRL
421 ALLLAVPALA LYLPGQM
SEQDB ID: 3101377BWT
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKIFITERE LRFGDCDISG TAYFPSYLDI LNGVNEEFWA SLGFAWHDII WNERWGTPTV
61 HLSCDFSKPS FFGETLRFEL GVVKVGRSSV TVRHRISCGD EVRWSSTQVL AASDLDKHTS
121 IPWPDAMRAA LEARLTSADE LGF
SEQDB ID: 3101377BWU
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAESTDQTEQ LRELAEIGLE GYAPYLMNRI MGRYNANLRK EMTALGLSTA KMRALAILSA
61 KDGLPIGTLG IFAVVEQSTL SRALDGLQAD GLVRREVDSD DQRSSRVYLT PAGRAVYDRL
121 WPHMRASHDR MFQGITPQER QAFLATLNKM LANIRVHEI
SEQDB ID: 3101377BWV
Reference:
3101377
Name: indolepyruvate oxidoreductase, Subunit: IorA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAERSFKREV QDLRLGAGET FTGEGILAIT KALLESGVGY VGGYQGAPIS HLMDVLADAQ
61 DLLGELGVRY EANASEAAAA AMLAASVHYP IRGAVTFKGA VGVNVASDAL ANLASSGVTG
121 GALVIVGEDY GEGSSIMQER SHAFAMKSQF WLLDPRPNLP SIVQAVKQGF ELSEASNTPV
181 MLMVRIRSCH VTGQFECADN LRPPLSVRDA LSEPRRDFAR VVLPPMSYQH ERDKVENRWP
241 AAERFITEQG LNEVFGPETA PVGLVVQGGM YNGVIRALQR LGLADIEGRS AIPLYVLNVT
301 YPLVKDEFLA FARGKDALLV VEEGQPEFIE QGLAAMLHRA RSPVTLQGKG LFPMAGEYTG
361 QIMLEGIAGF LKDAAPQLLP GQVIAPNAPP PEMPDLSQTV PIRPPGFCTG CPERPIFAAM
421 KLVEQELGKH QITGDIGCHL FAALPPFEIG GSTMGYGLGP ASNAAFDGGG ARRAVSFIGD
481 GGFWHNGLSS SIGNMVFNRS DSVAIVVDNY YSAATGGQDV LSSRAKNPSK ATGNPISRAL
541 EGVGVKWVRQ IDRTYDVGHM RDTIREALTT DYDGPKLIVA SSECMLNRQR REKPLRAQAI
601 REGRRVEAPR FGVDEDICTG DHACIRLSGC PSLSLKVLDD PLRDDPVASI DQTCVGCGNC
661 GEVADAAVLC PSFYRADLVH NPGRWERLLA GWRSRIITWL QDRRARRQLD FGEAS
SEQDB ID: 3101377BWW
Reference:
3101377
Name: indolepyruvate oxidoreductase, Subunit: IorB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRMDGVMTP QGADSARAIT KLVVMAVGGQ GGGVLTGWIE AVARAAGRAV QATSVAGVAQ
61 RTGATIYYIE IAPEGVAAPV FSLAPAAGDV DILIAAEMME AGRAIQRGFV TPDRTVLIAS
121 EHRALAVSEK MVPGNGIAQA DEVMAAAEIA AARFLSADME RLAVAKGSVI SASLFGALAG
181 SGALPFPRDA FETAIRNSGK GVEASLAAFT AGFEAVSAGP AQPEAAVTAK TPAEPAVQGP
241 SAQLAAWAAL TARVEALPAD AREMALAGLR KVVAFQDCTY GGEYLDRLTA LARQDEPAQG
301 FELTREAAKH IANAMAYDDV IRVAGRKTRA ARRARIDAEM GRSPQQGMQV TEFLHPRAEE
361 ISSLLPAGLG ARVAASPRWM ARLDRWFGHG RRIRSDRVSG FLQLYLLAGL RGYRRRTLRH
421 AQEQAHLEAW LHKVGETRER DYDLAMELLR CRRLIKGYSD THARGLSKFD RVMAGADLVA
481 GRVDAADWVR RLREAALQDE EGRALDGALK TVRSFSS
SEQDB ID: 3101377BWX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHARGSGRKP MKLWYQSYVD YENGAEYWDM LGPHLDAVSE VGTQVDIRGI TPFDSYAHPL
61 VEFRCAREMI CNAIRAEREG YDAFIVGHFQ DAGLYEARSV VDIPVIGLGE ATMLWCCQMG
121 QRLGIVTINP RFIPWFHHQI GKYGLRERVS GVHAMTFEPG QILGAYGDTD KAAEVKRLFE
181 EQGRPLVAAG TDVLIPGGGI PMLLFSQFHD HQIDGAPVVN GIPIAVKMAE MAVNLKRLTG
241 QGVSRVGDYT KAPEHIIEEF MTHPKGL
SEQDB ID: 3101377BWY
Reference:
3101377
Name: OmpA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFVPFVRGQP VMTVRLLRLA ACFVVMPYAG TAQDAQPRSD LMTFAQGVLP VSVETGPEQM
61 RTGSPQAIAA IDGNAGGFGM TPKPGSAQAQ VTIIYALPSL TRFDRLAVPN IGETPSPSQT
121 FFRDIVISGA VEGPDGPYIP IAGGTLATHA DPGLVTELAM EDAVPEVLWL KVLLSGGINV
181 ERDKTYFEFS ELIGEGTQQP MPMSEGFTGT WKGRGVSIEL LQEGAHVTGC YDKTGTLSGT
241 VDGRVLRALG SDPAGIPSQF ILIASADGAM RGLRSTNGAP FKPYDGEPAA GAVVCARPEP
301 APPGCGAVLH GIGFNYDSAA IRPESAVLLN ALADGLRGTD AARIEIVGHS SSEGAAEYNR
361 ALSQRRAASV VAALVDMGLA ADRLAALGKG EDEPIASNAD EAGRSLNRRV EVHCR
SEQDB ID: 3101377BX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNNLIAKAA IDRRLAEIVS PVIADLGYEL VRIRLMSGKS TTLQIMADKP DGGIEVDDCA
61 AISNAVSATL DVEDPILDAY TLEVSSPGID RPLTRLKDFE MFEGYEAKIE TTEMIDGRRR
121 FRGELAGIEG NEVLINLDQN GETVTIGLEF DWLSDAKLVL TDDLIKEMLR QRKAAGVLNE
181 DQFDEIVEEA PETGATTMAR DGSEEETK
SEQDB ID: 3101377BXA
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEWYEALVFL LGMILFFMAL GVPVALAFLA ANMIGAAYFM GGRGDIASQM ARGIGQLANN
61 AIPTVTSFNL MPVPMFLLMG EIFFFTGLAN RMFGAVDRLM GKLPARLSFV TVAGGTAFAT
121 LSGSSMGSTA LLGSLMVPEM QKRGYKKHMA IGPILGTGGL AMLIPPSALA VLLATLAELD
181 IGDLLIAGIM PGLMLAIFYA VMILGMALYD PSAAPAYEVE SSDWVEKLRL LFVDILPMVS
241 IVIGVILVIM FGIATPSESA AFGCLGVIVL AALYRSLTWE GIVKSVAGAL KVTTMALLII
301 FGSATFSALL AFSGASSGLI RWATGFDLEP ITMLLIMFGI LLVLGMFMDQ LSMMLLTVPI
361 FFPLAQTLGF DLIWFGVIVL LALEISFTTP PFGLLLFVMK GVSAPGTSMR DIYVSALPFI
421 GCSMLLVALL IIFPGIALWL PGLGQ
SEQDB ID: 3101377BXB
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRLIDRICD LLAILAGIYL VGIMFGIVIS ALARTLNLSG SWSSHIFTFT EFGLLYIVMA
61 ASPWLVRHRG HVFIELLSAA LPRRMQRSYS RAISALCVVI CLTLVWYTWG ATARAWRFGD
121 AEMRSLDMPK YLLLGAMPIG FGLMAAQFLR FVFGPVTMHT GEAGVHE
SEQDB ID: 3101377BXC
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIFSGLSRK ATYLMAAAAL AVMAAPMSAK AEDRVSAVHA FPEFLVYTKT FLAMVADINE
61 RGKGIVQIDV RGGPEAIGMF EQPAAVRDGV VDMVHTPGSF YGANVPEIDA MVASRVTPME
121 ARANGGAALM DKAHQERFNV RHLGWVDGGI KFHIYMNSEP KFRDDGILDL TGVKLRDNPI
181 YHAFFEQLNA TTASMPATEV YSALEKGVVD AAAWTEIGIP QLKWNEFLKY RVDPTFYNTD
241 IGVIFNLDAW NALSPESQKL IQDVVIEWEG KSYADRQAEV AADAKTLADG GMSFVSHSAE
301 AGETYRKMAD DSAWARMYER IDGGGAGAET YMALRKAYAL AE
SEQDB ID: 3101377BXD
Reference:
3101377
Name: opine dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEIAVLGGGN GSTAAAVDLT AQGHNIRFWR RNASAQAELK ARGNVITLKD FEGARPIRIT
61 MVTDDIGEAI RGAELIVCPT PATAQSDIAA AMAPHLADGQ VVFLPPGSFG SWIMADIVRK
121 AGNHADVSWA ETGTLPYLTR LHGADTVAIT TRATRLPTGV YPLRNAEHAH SVLARAYPAV
181 EPAGDALSGA LMNAGPIIHP PLITMNAGPI EHFDHWDIHN EGTQPAIRRV TTRLDAERMA
241 VREALGYGAP HFPLADHYET SDWMYGNLAH DKLVDSGDWR EHLVLTEHRY MREDVAVGLA
301 LLVSVADWAG VPAPTATGLL ALGSAICDDD FRQSGRTLEN LGLADMDRAA LQTMLRDGA
SEQDB ID: 3101377BXE
Reference:
3101377
Name: 3-hydroxyacyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAARETIAAV GAGRMGRGMA VAFAYSGHPV RLIDAKPRPM DEFDRLKAEI RAELGSTFVL
61 MADVGLMQAS EADAMLARVE VVGHDDLAAA LAGVPFVFEG VPETLEAKRE VFERLSRHAD
121 ADAVIASTTS TILSNDLQGF VTPPDRFLNA HWLNPAYLVP LVEVSPGDAT DPAVTARLLD
181 LLERIGKVPV TCAVSPGYIV PRIQALAMNE AARLVEEGVA SSADIDKATK YGFGFRFAVL
241 GLLEFIDWGG GDILYHASRY MTRATGQNRF AAPDIIETNM AEGRRGLRDG RGFLDYDGLD
301 VAAYQRERIG AFAAMLRHLD KMPVKGD
SEQDB ID: 3101377BXF
Reference:
3101377
Name: aminotransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPTPYLAPI PVRGRISRPQ PKGLPVINMG YNELPYPPLP AIRAAMEETA ERAQSYGSPH
61 CDALRDALGA AHGLDPEQIV CGNGSEELLD VIARCFARPG DEILISEFGY IQFALTANRV
121 GATLVKARER DNTSDVDALL AAVSEHTRLL FLANPNNPTG TMLEIDELSR LARDLPAQVV
181 LVLDLAYGEF AAPDYCAAVH SLAANHENIV VTRTFSKAYG LAGARVGWCH APAWMVPVLY
241 AARGMGTVNA LAQAGAVAGL ADPAAIQERV DEIVSERARL TGALGQLGLV VTPSRTNFLM
301 ARFREGDAAR TEALVEHLFE DAGIVVNRTR EAGLEAFFRF SLSLPAHNDL LLDSIRRFIG
361 QG
SEQDB ID: 3101377BXG
Reference:
3101377
Name: 3-ketosteroid dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPDSDPHIA PPPARFDIAS QTLIIGAGAC GLVAALAARE AGQEVLVVEA DALPRGSTAL
61 SAGLIPAPGT TMQRAAGIKD NAALFAQDIQ TKAKGQNDPD LVETLAAGAG PLIDWLAERH
121 GLPFSVVTDF DYPGHSRRRM HGLPGRSGEE LIDALRQACE AQGIDIVCSR RAHILHMEEG
181 RVRGVTVFGS DGSGESIACD RLILACNGFG GNRQLVTDHM PEIREALWFG HDGNRGEAVL
241 WGAALGADLR HLGAYQGHGN VAHPHGILIT WAVITSGGVQ VNRDGLRFWN EAQGYSEAAR
301 AVMAQPGGAA FAIFDARIAG IARQFEDFRR AEAAGAIRQA DTPEALAHLL GLPPDALAQT
361 LRDLPRDGTD GFGRLFQPPP LAPPYCGVQV TGALFHTQGG LRTDARARVL RRDGTPVPGL
421 YAGGGAACGV SGNGDSGYLS GNGLLSAVVL GWIAGSCRVA AS
SEQDB ID: 3101377BXH
Reference:
3101377
Name: isocitrate lyase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLKARLAGE DIVLAPGIYD GLTALIAEQA GFEALYLSGA AVAYTRLGRP DIGLTSVTEM
61 AETMTLIADR TRLPVIIDAD TGFGNALNAQ RTMRLYERAG AAALQVEDQT YPKRCGHLKD
121 KALIPAAEMA GKIAAMADAR RSDRTLIIAR TDAIAVEGFD AALERAETYL AAGADVLFVE
181 APQTETELSG IADRFAARVP LLANMVEGGA TPIRSAEALQ ALGFRLVIFP GGIVRALAHT
241 ARDYYTSLRA HGTTAPFRDR MYDFAGLNEV IGTTEMLERG KRYDPGQ
SEQDB ID: 3101377BXJ
Reference:
3101377
Name: isochorismatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPKTWTLA QTALLTIDLQ NDFLHPEGAY GRAGQGAAAI AALPARIAPL VAALRAKGGL
61 YISAQFTLVP GPRGEPLISP HLKALRPFLT RGDFAPGSFG HQLVDALQPA DFTVEKVAYS
121 AFYQTRLEYI LRAMGIRQLI VGGIVTNGGV ASTLRDAHLR DIDTVMLSDG CAAFRDEVHD
181 ATLLSLGTVT NQMTCAEALG WLEGAP
SEQDB ID: 3101377BXK
Reference:
3101377
Name: hydantoin utilization protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hyuA
Sequence:
1 MSGKMIGVDV GGTFTDIFVL DENDGTARVG KVPTSRPDQS TGFLQGITDA VADIGSVGVV
61 VHGTTAGTNA LLERKGARTG VICTQGLRDV LEMRRRDRPR TWGLRGDFEP VVDRRDRLEV
121 PERTLADGTI RTPVDLDAVR RAARQLQDQG CVAVAILFAN AYANPANEAA AVAALREIWP
181 NEHVSASSEI LPEIREYERF STTALNAYLQ PEVSGYLGRL GAALDSGGFG GEFMIVQSNG
241 GVMDVDTACR FPIRTALSGP AAGVIAAGFI ARSAGYDNVI TGDMGGTSFD VSLIAEGRSM
301 LAPQTSIDFG MVVRTPMIEI TTIGAGGGSI AWVDKGGLLN IGPESAGSDP GPVAYGLGND
361 RPTVTDANVV LGRIDPENPI GGKLARLDVE AAARAIDIHV GQPLGLDTLA AAEAILRVAN
421 SRMAGALRLV SIERGFDPKK FAFMPFGGGG ALHAGAMLAE VGIARAIVPR YPGVTSALGC
481 VIADMRQDFV QTLNAMLDGL DTDMLGTVMQ DHHDRGMAML KAAGTRFEAR EATFALDMAY
541 IGQTHTVSVP IPVQVSAGKV HSPTQAQIAA AFDSVYRDTF GRLLPGGVRR ILNLRSAVTG
601 KRPKFDLATL APTVTDPARP KSSRKVHFGT DWHETAIYDR LSLPVGTLIT GPAILEQPDT
661 TVLIEPGLVG RVDPLGNVII ETGPEAGA
SEQDB ID: 3101377BXL
Reference:
3101377
Name: hydantoin utilization protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDIDPITLS VLAGRMEQIA DEMDATLFRA AFNPIIAEAH DASHGLYHAE TGDTLVQGKS
61 GLPIFVGVMS FAVKAVIEKV AADGDLADGD IFIFNDAHIG GTHLSDMRLV RPYFREGKLF
121 CWLASVGHWH DVGGAVPGNY NPAATEVFQE AFVLPPVRLA RAGVVNQDII DILLRNTRLP
181 QSAQGDLNGQ LGALDLGVRR MDELLDEYGA GTVDAALDAL GIRAERLMRS ELAAIPDGRW
241 EAEDFLDNDG IDDTPLPIRV ALEIKGDRMH LDFTGSAPKC AGPVNIALPT TIATVYVAIK
301 HIFPLLPANA GVMRPIEVTV PEGSILSAEF PAPTGGYTET ILRMIDVVFC AFAQAVPDRV
361 VANAYGTINA LSIAGRRSNG KPWVMFSFYG GGHGGSPEGD GLNHGNAPIS TATIPPLEIL
421 EAAYPVMFRQ WALRRDSAGA GRHRGGLGAV YEIEVLEENG AEGFLFGERG RFAPKGVAGG
481 EEGALNVFSY QQGADWPHPP LVSKMRGIRL KQGEAVRLET PGGGGYGPPA ERDPAAVALD
541 VARDYLSAAE ADRLYGPTWR EGMR
SEQDB ID: 3101377BXM
Reference:
3101377
Name: tautomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVVELHLIK GYGEEDKRRL GHALTDAVRF VLPAPLDGIT VMIHEMAPDA YYRGRDTKTP
61 APALPDPAEV VRAYLAAMEA RDLDAARAMQ GDGFTMYFPG TGPMADLSEL IDWARPRYSF
121 VTKTYDGFDA MPGAGDTSVV YCRGTLSGEW LDGTAFSGIR FIDRFELIGG RITRQDVWND
181 MGEMRGRT
SEQDB ID: 3101377BXN
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAGAKSRRV YLSLLEQISA GRLEPSRKLP GEEQLAEDYG VSRVTVRRAL DALTENGFLS
61 RRAGSGTRVR PRPAAPQPVT MDFSTLLPQL VEIGRSTEVR LLSSRMDQAP EHVARALSLG
121 PGEAVQIAQR TRSIGGTAYS HLTTYVPSRI AAGISDEDLS REPLHVLLER NGVQIADARQ
181 SVSATLAGPE VALALGLPEG AALLSLDRVM RDAGGRGVEF LKGLYRPDMF RLDMSLARVE
241 NGEGRHWEPA ITPLKDTPR
SEQDB ID: 3101377BXP
Reference:
3101377
Name: 3-isopropylmalate dehydratase, Subunit: large, Class: EC4.2.1.33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuC-2
Sequence:
1 MLRREDGSAL LWVDRHLVHE GSHHAFARLA ERGLPVAEPG LTFAVVDHYA PTRRAGPIAD
61 PAIARMIETL RGNAVRHGVR LFDLDDPDQG IVHVVGPEQG LTLPGLLITC GDSHTSTHGA
121 FGALAFGIGA TEVAHVLATQ TIWQRKPRAM RITVDGTLPA GVSAKDIALN WIARLGADGA
181 QGHAVEYAGS AIRSLSMEGR MTLCNLTIEG GGRMGMVAPD EVSFAYLRDR PHAPRGGDWH
241 KALDNWQALA SDADARFDRD VALSTEEIAP IVTWGTSPEQ ALPIDASVPI PDTLQPAKAQ
301 AARAALDYMG LVPGRPLAGT PVDQVFIGSC TNGRIEDLRA AAAVLAGRKA RVPGLVSPGS
361 ARVKAQAEQE GLDRVFTEAG LDWVASGCSM CVGMNGDLVA AGKRCASSTN RNFRGRQGKG
421 ARTHLMSPAM VAAAAVTGTL CDVRPMLQGR AL
SEQDB ID: 3101377BXQ
Reference:
3101377
Name: 3-isopropylmalate dehydratase, Subunit: small, Class: EC4.2.1.33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuD-2
Sequence:
1 MAGWREQRGR AVLLAMANID TDQLIPARFM STPRAEGYGR FLLHDVRRMS EGALDPEFPL
61 NAHPDACILV TGRNFGSGSS REAAVYALVD AGIRVVVAPS FGDIFAGNAV NNGLLPARVS
121 EADADLLAKT LSSGAGNGVA DLASGLLRIE GVSVPFQLDE VWRTKLLNGW DDIDLTRLHG
181 AEIAAYRTRL RAEPGRFPGG DAT
SEQDB ID: 3101377BXR
Reference:
3101377
Name: RNA polymerase sigma70 factor, Isotype: ECF family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTQTLDSPS GAKRLRVMSR HEREPVSQSK TDFSQQTRWM LAVRDNRDRL AFAALFDHFA
61 PRLKGFVIRS GTPAHQAEEI VQDVMLTIWR KAAMFDPHRA QVSAWIYQIA RNRQIDIARK
121 ENRPMPEELK EEPGTEPDAS QILGLEQEAG QLKQALANLK PEQREIIEKA YLGELTHQEI
181 SAQTGLPLGT IKSRIRLGLE RLRYELKDLK Q
SEQDB ID: 3101377BXT
Reference:
3101377
Name: transcriptional activator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAINHHVPD AMLAAYAAGT LPYAFAVAVA SHVSLCAQCR VALEAHQAVG GAVLETADAV
61 AVSSSLKDSI LARLDDPFTP EPVYERSGIY PGPVIEAMQR RAPKWKKLGM GVRQDILSAD
121 AHGSVRLLYI PPGQAVPDHS HNGLEMTLVL QGSFSDATGH FGVGDIEIAD ETLEHTPVAD
181 QGDACICLAA TDARLRFNAL MPRLLQPLFR I
SEQDB ID: 3101377BXU
Reference:
3101377
Name: short-chain oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQFSGKTFW LIGASEGLGR ALAKRLDGEG ARVILSARNG DRLEQLRDEL QNALVVPLDV
61 TDTAAVQKAA ASVGPLDGVI YNAGAYEPMR ATDWDSDAAL RMSDVNFTGA LRVLGEVVPG
121 FVRQGRGDIT LVGSLAGYRG LPAAIGYGAS KAALVSLAET MRFDLKGTGI TVRLVNPGFI
181 KTRLTAKNSF RMPMLMTPET AAEHVLKAMR KRRFRTDFPA PFSWAIRCMD YLPDILVYRG
241 R
SEQDB ID: 3101377BXV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLRKALAA GSFLFRGTFV QSDPIPARAR RPIMMLEHIQ ARTHHARRGA LRNSFTYGVD
61 YVLTDLGPAG PLLISRNRFN LWSLWDHRHG GARDNGHGVH WFRSLLQERG LATENAQLLL
121 LTQPSFLWFH FNPVSFWIAL VDGTPRAFVA EVNSTFGQRH CYFCARDGFA PIRKSDTLIA
181 EKLMHVSPFQ RIAGHYAFNF GMTDTQIDIR ISFENGDHGV LATLSGERRP ATSASLAWAA
241 IRRPLGAARV LALIHWQAAI LYLKRAPFLK KQHPPEHLVS DGYDLRGTKE
SEQDB ID: 3101377BXW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYDQTQGPRK RIAIVGGGIS GLSAAYYLAP FHDVTLFEAA PRLGGHARTV LAGKNGDQPV
61 DTGFIVFNYV TYPYLTRLFR DLDVPVIKSE MSFGASINDG QLEYGLNTLT AILAQKGNLL
121 RPQYFKMIAD ILRFGKRAEA AARDDDKTIG ELVDELGLGS WFRNNYLMPM CGAIWSTPVA
181 EVDRFPAKSL VQFFRNHALL AGSGEHQWWT VKGGSIEYVR RLEAALVARG CTLRTNMPVE
241 QVQRDDFGVH IQTGDAQRAT FDELILACHS DQTLKILGAN ATKAEASALG SIRYQANKAV
301 LHCDTGQMPR RRACWSSWSY RSQDGDIGVT YWMNKLQGIP ESDPLFVTLN PSKPIHSEAV
361 YDEVQFHHPV FDKAALKAQQ DIRQMQGQNH TWFAGAWNRH GFHEDGIASA MRIVRALTNT
421 QQLKGMDHAF HEQSPEVEFP VDMRASA
SEQDB ID: 3101377BXX
Reference:
3101377
Name: cyclopropane fatty acyl-phospholipid synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFTNKALKS NFLSTCERLH EGQLTLRTPE GERYRFGTRG PEAEMVIRDW AAVSAMAAHG
61 QVGLGETYVQ GMWDTPSIEG LMTLAMNNRD HLGAYDQASP FHKAKFRLVD TVMRANSRRG
121 SRRNIRSHYD VGNEFYGLWL DDGMTYSSGL FETGDTDLAR AQTRKNNRAL SRLSQGERVL
181 EIGCGWGGFA EQASQEGWDV TGVTISRNQH SYAECRLDGR ADIQLRDYRD ITGTYDNIVS
241 IEMIEAVGAR YWPSYFATLK RNLAEGGRVL LQAITVKDSF FETYKTTSDY IRQYVFPGGM
301 LLSDSVIAKQ AGDAGFALCD SFAFGQDYAR TCRIWAERLS AQKRRIAEMG HSESFLRNWQ
361 YYLEICAASF AVGHTNVVQV ELAHA
SEQDB ID: 3101377BXY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSSIALLWV LLTSVGAQAN TVGGVLPDAE LRGAATFRFV GLPLYEARLY TRSGAPLDWN
61 EDFGLELRYL RTLTQRDLVE GTLREFARLG SSLPVREQLE TCFSDVRKGD RYTAVSKGPN
121 RIAFWLNGRK TCTLAHPQIK SRFMGIFLGE STRSKSFTHK LKGE
SEQDB ID: 3101377BY
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRIDRRALF ASGAAAALLA SAGMSLADRP RAGGSLRLAV PRDDSLERIA RGAVFDTLTE
61 IAPDGTLRGE LATGWQPDDS ARVWSFDLRE DVTFHDGTRF SASDAAASLA EIGLAEALGP
121 TRLRLELAEA DPGLPFRLAD TRFAITRAGG AVTPLEQANG TGCYRVERAQ DGRHFLGRKV
181 VGHYKQGQAG WADTVEVIVI PDPAVRAEAL RDGYVDVAAL PLPDGLRDRT RFRYHPSEDD
241 MALAAAVSVG LPRQISSRSA LDDGRLAERW WVG
SEQDB ID: 3101377BYA
Reference:
3101377
Name: Na/galactoside symporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMLYPRVSLY ALMLAAAGIP LYIHLPRFAS LNLGIGLGTV GAILLLIRLV DLVQDPLIGW
61 AIDRWPRAQT TFAITAALGL ATGFPLLFSL SAGPQVEARV IAILVLLFSS YSLGMILLYA
121 RSATLAATPA PRDVMTMAAY REGGMLAGVV VASIVPTLFV AMGAGAQGYP AFGLFLGALA
181 LVCAAISLPI WQRHPVPGHP LSLAGLARSG AMRLLVLALV NSLPVAITST LFLFFVEDRL
241 QLPGKAGPLL ILFFLSAGLS LPLWTGLSHR AGPKATLLIA MPLAILGFVG AAFLAPGNLV
301 GFALVCIASG AALGADMVIL PAMFSVALNR AGLEPSLAFG IWSFAGKLGL ALAAFLVLPL
361 LERNGFTPGA LNSAQALTSL NISYAVIPCI LKLGAIALVL ALPSEGRST
SEQDB ID: 3101377BYB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLLTILSLL VLLVIFAKAM FLSFRAQSPE DYAGTGPAFV LKTHLSGPIL SEGLIYGPTG
61 KMTNSFVARM VGEWEGDTGT LSEEFTYSNG KRQSRKWFLK QGEGNSFTAT ADDIIGEARG
121 TVSGSTIKME YKIVLPEDAG GHSLSVTDWL YLTENGVIMN KSEMRKFGIK VAELIATMRP
181 DPDAQP
SEQDB ID: 3101377BYC
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRKRPLLAI AVALATAAFA LSPFLTQEFA GFRPEQFPVV IDFWPVQPAG WAFGIWGVIY
61 LWLLAGALWG WFRAPHDPDW QQMRIPLLVS LCLGIFWIAA ANAAPILATV MIFAMAAGAI
121 VAMLRAGDDA RVWQVRPVAL YAGWLTVASG VGTGVVLSGY GVMTAQSAAL TMLALVMLVA
181 LWVQFRRPAE WAYPVAIIWG LCGVCAANLP SGNWPVIVLS AIGVAALAAG FVLRGRAGKS
241 RRAS
SEQDB ID: 3101377BYD
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDLSGEFDH SEVRRRVGQK LLDLLKADYF ASYVWDSDAQ QFVSCVQINM TDDNLRRYES
61 YFQFHDPITP TLQRRKKATP VSEVMRHDRL VKTEFFNDFL KQDGLCYGMN YFAYDRGDNI
121 GDLRIWRGAH REDFTPRDAQ FVDAVGPSLV NALIRARSAK EQVPSLRFAQ IADDLGFTSR
181 EAEVSDLLVT GLTDEEICTK LGFSKPTLRS HIASIFRKSG LNRRSQLAQF LAEKNHHL
SEQDB ID: 3101377BYE
Reference:
3101377
Name: indole-acetamide hydrolase, Class: EC3.5.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLDLARLSA TETVAAIREG SLSPVAYAEA LADRAARHAG LNALQSFDAG DLIQAVRQAH
61 AAHRLGALSG LPVVAKDNIN TTTHPTSAGT GALLGHKPAT DAGVVRRITA AGGVIGAKAG
121 MHELAFGITS NNAVTGAVRN PHDPALIPGG SSGGTAAAIA AGIFPLGLGT DTGGSCRIPA
181 ALCGTVGFRP STGRYPRDGV VPISHTLDTV GSFARCVADI SLLDEVMTGH PTLRRDDLAG
241 VRLGLPTVRF FENLDPAVER ATADALTRLE AAGATIVEVS LQDIWAHAEA FSIPVGLYEV
301 VRDLPHYLQE HAPEVSFEAL VAGIGSPDVK GFIASQLGED AIPEQAYREA MEVHRPAMLR
361 IYRSVFGENA LDAIVFPTTP LTARPIGDDE TVELNGARVP TFPTYIRNTD LAPNIGAPGI
421 SLPCQLSSGL PVGIEFDALP GADGSLLALA SAAEKAMAQ
SEQDB ID: 3101377BYF
Reference:
3101377
Name: regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMFKMKAKLL AGAAVALVLG TASAVADIKV GVLLPESGPA GLFGPSTRNS ALLAAEAINA
61 GGGINGEQIE LVFADVGVPP AEAAQAALRL WKGQGAQAFV GMHDSAVREA LIGRFNGQVP
121 YVYTPVYEGN SCAPGLYVTG ETPSQQLAPV IPYLAGKEGV SKWYLIGHDY NWPRDTNALA
181 KGYIAEAGGE VVGEEYVPFT VSEFDSSLQR IRESGADAVL ITLVGGGSVG FNVSFAGFGL
241 DDQAIRLGTL IEENTLAGIG AENADRLYSS SGYFASIKTE AAASFAADYA AAFGGDGAAL
301 NGLGQSAYEG LMLLAALANK AGSLDVAAMD AAAEGTSWTS PRGANVLTGR HMAQTIYLAD
361 GSGGAFEVVA AFDSVASSEA CTN
SEQDB ID: 3101377BYG
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSVLFLNLA WQISTLALVA LGLAIVFGKL RIMNMAHGEF VMIGAYAPVI TSSLGLSGWW
61 QLPVCLLSVG LVAFVLERAI IRHLYGRMFD SLLATWGIAI LLRETVELIF GRGYQSVSPP
121 IGGTLRLFGA DYPAYRIAVI VGIVLGFAAL YWWSTRSRVA VRIKAMVGNP ELAEAVGIDT
181 ARLSAGAFVF GCCTAGLAGL VLAPTIRIEP MMGLDYLIRS FFALVVGGLG SLEGLGIGAG
241 IIAGTQSVLG AVANQTYGYL AVLTLSILFL WVKPDGIRSS SR
SEQDB ID: 3101377BYH
Reference:
3101377
Name: branched-chain AA ABC transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASVLLPVSL LLAALLLIPE LFGDFTAYQI GLYLIYGIAA QGIGFLWGKT GVLPLGQALF
61 FGFAAYVTAI TLRAETGLIT ELALAVAVLV AIAVFACALA ALIFRGRNDS GPYFSLITLA
121 LVMIAEQIAG TATTLTGGFN GLSGFDSLGK LDPFAGFYYV IVGVTVAVSL LLFVLNRLPV
181 NLIARAVADN EPRLQLLGFP THIIKGAAFA FSAVIAALAG GGCLPSHQGI VTPTSMGFGL
241 SAELVILTAV GGRYHVLGPL IGAVLVGWAS AELRDSFPYW ELLMAVAFIL VVLKAPGGIA
301 ELLEAGYRRV RATKPGAPSK VIAAPPTKAV DAAGPLRFDD VHLQIGVVRI LNGVSFQTPA
361 TGIVSIIGPN GAGKTSTLNT ITGNLRITGG RITFGRRKID SRPPYKALHS GIGRKLQVPS
421 VFFSMSVSEN LAIAMMANRS RLLDLLRPST YRWRSRSLSD LLDHPSVPLK EELVEPVDHL
481 PQGHRQFLEY AMTIAAEPQV LLLDEPCAGL SPDETALMTD LVRHYQAETG GLVIVIEHDM
541 SIVEAISDKV LVMHLGQVLA FDTFEQVRRN PEVQAVYAGG TK
SEQDB ID: 3101377BYJ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALLEIDAL TGGYRDTNVL FGLSARIDAG SVLGVFGRNG VGKTTLARLV QGSLLAVSGD
61 IRISGHSVAA RPAHVRRAMG IGYMPQTSMV FDDLTVRENL NLGTNRDTPE RYFERFPRLA
121 ERLDQPAGTM SGGERKILAF VRTMIEDTSI LVLDEPSEGV QPENIELMAD CLEERAAAGA
181 AVLLCEQNLG FLARISTGYL GLDAGKVVLE KPADEVSVAQ LRSVLSL
SEQDB ID: 3101377BYK
Reference:
3101377
Name: 2-hydroxychromene 2-carboxylate isomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRARYQPDR AITCHATFLS WALSRPGIGN QMSFDSLVKS RIIAHIVGER RQMQRRAAFE
61 RRRARRGAGH VVDYFHDMAD PYCHLTAQVL HRFQERYDIA LRPHLISGPP DWAAPDRAGL
121 DAYARADAAR LAQRAGLSFP ATPVPPTAER LARARAQLAA SLTQPDFAQT AVALSNAVWQ
181 GAAFPTAPET DPAEAMAQGD ARLAQQGHYL GATFCYGGEW YWGLDRLHYL ETRLRALGAA
241 RPGAPTDLIF SPPDPDPQPA HHRGEVIEAF ISFRSPYSYL AFDRARDLAR ARGAEFRFRP
301 VLPMVMRGLP VPRAKRLYII HDAAREARRL GLPFGRICDP LGLAVERGYA LIGYAREAGR
361 LDDYASSFLR GVWAEGIDAR TDRGLARIVE RAGLDWDRAR PRLQSDAWRA EVEDNRNALS
421 ALGLWGVPSF RVEDRAFWGQ DRLWLFDTDR AKGS
SEQDB ID: 3101377BYL
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTENTYTIRN LKKIYGHGET AVHALRGVDL DIPAGEFVVL LGASGSGKST LLNIIGGLDR
61 ASEGTALFRD RELTTMSDSE LTRYRRDHVG FVFQFYNLMP SLTARENVEL VTEIARDPMD
121 ADTALALVGL AERAGHFPAQ LSGGEQQRVA IARAVAKQPD VLFCDEPTGA LDSTTGRAVL
181 QVLKEVNERL GATVLVVTHA ASQAAMADRV IRFGDGQVIE VKVNETKLTP EQIEW
SEQDB ID: 3101377BYM
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALSLKLGR DLWRIKGQAV AIALVVAVGV LLQVMQTGLV RSLDETRRAY YERYRLAEVF
61 APVTRAPVLA AAELRKIAGV AAVETRVVGA ALVDLPGAVV PVRAQVTSLP GLGAPRLNDV
121 LLTDGRGLSR ERPDEILLLQ SFARAHDLSP GDRISATMNG ARHEFTISGL AVSPEFIYTT
181 APGELVPDDS RFAVLWMTRT ALEAAFDMDG AFNEALLSLS RGTQPDAVMA ELDRLLDRYG
241 GTGAYALDDL PSNKFVVEEI AGLKRTSATV PPVFMAVAAF LLYIVISRLV DAERKEIGLM
301 KAFGYTSWEV GAHYLKMVLV IAVGGAALGG VLGILAGRWM VDLYMLYYKF PFLVFRLDPS
361 SFATGFGVSV LAASGGGLLV LRRVFALTPA VAMRPAAPAD YSRARPLAGW LGRVVDQPTR
421 MVLRRLVRQP VRMGGAIAGV GAATALGAAM ASLLASYDTM VELSFGILDR SDVTVTFIHP
481 IAEQGRHDLA AIPGVIEVEP IRVVSAVLRN GRHSYRGAVN GMIEAPRLYR AVDADMTDIP
541 IRRDGIILST GLARELDIAA GDRLVLDVRE GRRPLVEVPV SGISESLIGS PAYMEIGALN
601 RLLKEPQRIS GAFLRVDPAQ GDSVYRILKD RPMVAGVALK SETRAALREV LDRGAGAMRY
661 VMALVAGVIT FGVIYNAARV AQAERERDLA GLRVLGFTRG EVAFVLLGEL AVVVVLAMPL
721 GALGGYWLNL AVSAGFSTDL YQIPASFGLV GFGQAMIVVL IAALLSGWLV KRDIDRTDLI
781 LALKNRE
SEQDB ID: 3101377BYN
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTLARQQRR SRSFLTLVTA LGVAGFLAYA FWPRPMLVDM AEVVQGRMVL TIDEEGRTRV
61 KEPYVVSSPV AGELQRVTVE PGEVVERGKT VVAQMRPANP SALDVRTREQ AHAAVTAAEA
121 ALRLAHADLN AAEAKRDFAE SELDRAGKLV ERGVTSQVTL QRAEQEARVA RANLDTVSAA
181 IAMREAELAN ARAQLIGFDD AALGAVLSER NPEGYSIPLR APIDGTILKV IQKSETTLPA
241 GAPILEIGDI EGDLEVMAEL LSSDAVQVQT GDRVIITNWG GARDLVGIVS RIDPYGYTKH
301 SALGVEEQRV QVIIQFETPS DKRENLGHGY RVEVQIVVWE REDALIVPSA ALFRHGDAWA
361 VFAVEEGRAA LREVEAGRNN GREAEILSGL EPGARVVLFP SAELVEGMKL AQRQLD
SEQDB ID: 3101377BYP
Reference:
3101377
Name: fumarate hydratase, Isotype: class I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGVIRESDMI ESIAEALQYI SYYHPADFIG TMTSAWEREE NPGAKAAMAQ ILVNSRMCAM
61 GRRPICQDTG AANIHVKVGV QAKTDFSRSL QEICDEGTRQ GYQRDTNPLR ASVVVDPFGA
121 RKNSGDNTPC MLTVEMVAGD TIEVEVAAKG GGSENKSKFT TLNPSGNVAD WVVQTVETLG
181 AGWCPPGVLG IGVGGNADKA MALAKQALSE PLDMSDLLRR GPSDKTEELR LEIYDRVNAL
241 GIGAQGLGGV TTVLDVKIKS FPTHAASLPV GLIPNCAATR HVHFTLDGSG AAEFTPPSMD
301 LYPDILLDAA GAQATRLDLD DLNDTVLASL EPGQTLLLSG TLYTGRDAAH KRMVDMLDKG
361 EPLPVDLKGK AIYYVGPVDA VGDEVIGPAG PTTSTRMDKF TDRILGDTGL KVMVGKAERG
421 PVAIEAIAKH KAAYLIAVGG AAYLVSKAIK AARPVAFQDL GMEAIYELRV EDMPVSVAVD
481 TQGNSIHQTG PAKWRRATAA GS
SEQDB ID: 3101377BYQ
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQQRTVTAGV LEVSYLESGP ADGWPCILSH GFPYDVQTYA EAAPLLAAAG ARVILPWLRG
61 YDPTRFLSPD TPRSGEQAAL AADLRALMDA LGIGRAVLGG YDWGGRASCI VAALWPDRVE
121 ALVSGNSYNI QNIPRSGEPE TPEVEASFWY QYYFHSERGR RGLERDRRAL ARTLWRMWSP
181 TWAFDAAEFE RTAAAFDNPD FVEVVIHSYR HRFGLVPGDP AYAHIETQLV AQPKISVPTV
241 AIDGDRDGVD TGTAGHAAQF TGPFDHRVFK GAGHNLPQER PRDWAQAVLD ARAMARP
SEQDB ID: 3101377BYR
Reference:
3101377
Name: coenzyme PQQ synthesis protein, Isotype: E
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pqqE
Sequence:
1 MPNSGGEAPE MTVPAPIAML AELTHRCPLA CPYCSNPLAL HGKARELDTQ TWARAFDEAA
61 ALGVLQLHLS GGEPASRPDL VELTRAAHEA GLYTNLITSG IGLTPARLDA LEAVGLDHIQ
121 LSLQGTTPDL ADRIGGYKGG FARKMAVAAE IKARGIPLTL NAVMHRHNLD DLERTIELAI
181 ELGARRLEVA CVQFHGWATR NRAALLPSRA QTEAAKRIVA EAEARLRGTL AFDFVPPDYY
241 ADYPKACMGG WGSAGLNIAP DGTVLPCHAA ETIPHLSFDR FPDKTLREIW YEGAAFNAYR
301 GTDHLPETCR SCDRVNIDFG GCRCQALALA GDPAATDPVC SRSPDHHKVT ALLEAALAGG
361 DGAEFTYRRM PRKG
SEQDB ID: 3101377BYT
Reference:
3101377
Name: coenzyme PQQ synthesis protein, Isotype: D
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pqqD
Sequence:
1 MTLALAPTDR PYLPRGVRLV TDRVRGGIVL LAPEKAVALD AVGEAILSRV DGQTSLAALV
61 DQLVEAYDAP REQIEQDVQA FLQGLRARMF LMVAP
SEQDB ID: 3101377BYU
Reference:
3101377
Name: coenzyme PQQ synthesis protein, Isotype: C
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pqqC
Sequence:
1 MSREDLEARL RAIGAERYHD KHPFHHKLHG GDCTPDQVRA WVINRWAYQA AIPMKDAAFL
61 SRCADPDIRR AWRSRIEDHD GGVDSGGGLR RWLKLAEAVG LDPDYVASGR GILPATRFAV
121 EAYFHYVREQ PLLQAVASSL TELFAPKIHE NRIEGLLRHY DFADESSLSY FRKRLSEAPR
181 DVAYGLGWVL DHADTPEKED MACAALIFKT DVLWAQLDAL WGAYVDGHVP PGAWRPGEGM
241 A
SEQDB ID: 3101377BYV
Reference:
3101377
Name: coenzyme PQQ biosynthesis protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pqqB
Sequence:
1 MKIVVLGAAA GGGLPQWNCG CVNCSDARAG RLRPSGQSSL AVSADGSRWS ILNASPDIRQ
61 QMQDRSVLHP QGLRGSPVAS VLVTNGDIDH IAGLLSLREQ TPFDLFATAG IHEVLEGNRI
121 FDALARDKVA RRPVALESPF ALHDGLEAML FAVPGKVPLF MEGESVDTGL IGEQTVGVRL
181 SDGRNTAYYI PGCAYVPDDL LHRLSDAGHL LFDGTLWDDD EMIRSGTGIK TGRRMGHIPI
241 SGPDGSLVRL AGLAADKTYI HINNTNPVWR AGSAERAELA RRGWQVAHDG LEIVL
SEQDB ID: 3101377BYW
Reference:
3101377
Name: coenzyme PQQ biosynthesis protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pqqA
Sequence:
1 MAWTAPKLRE VNCGMEINMY APAEDEGGRG TDPIL
SEQDB ID: 3101377BYX
Reference:
3101377
Name: sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGSLINPTD TPDRQIEKLV KINAALMRRV EQATDASGAA YAQFERAALL EEEVRNRTRD
61 LERALDLLND SNARLAEANR ATEEARSNLA NAIETVQEGF ALFDPDERLV MCNSRFGLHM
121 PDIRDRFRPG ITFRQYVDLV SGSRYLSLPE NKTPRDWAAQ RIRRHKDDHV IFNVRMVGSR
181 WVQVSEHRTP DGGTVILQTD VSDIMRLERQ ERDRMLDDQA RLIRATLEHL DQGVCIFDNQ
241 GRLAGWNQRV GEMLSIPARR FSMGVRFFSL FEGFARNSSY SSGITEDTIR AWINATDSRP
301 PIGFEIRQGE NKTLSVHAQE MPDRGFVISF SDVSAERAAV RAIRQANELL EARVAERTLE
361 LADALSEAER ANASKSRFVA AASHDLLQPL SAAKLYMASI EPGQDPSQTH QIADKARRSL
421 DSVETILEAL LDISTLDSGK AEVHRAPVPL GVILAQLAEE LAPTARAKGL DLRVIPSSAM
481 VLSDATYLRR IAQNLIVNAI RYTRKGKIVV GVRRRGKSVR LEVWDTGPGI AAEQRDIIFR
541 EFQRLDAAAS AAEGMGLGLA IVDRACALLG HPLDLVSTVG RGSGFLVELL LAPTPDFTSF
601 RRTSGPALTP SGLDGLIVLL VENDAELRNA LTIAMEAWDV CVLPVASIAE ALALIDDEGI
661 QPDAVIADLQ LDRGEMGTVL LNMIRTRVGP VPSCIITASR SPAVIDICVQ QGWAVFHKPI
721 AAETLRGFLS GATPRTS
SEQDB ID: 3101377BYY
Reference:
3101377
Name: GfdT protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLSQGPVRA AQAAPQVLCT ASVHHDHPHA IETLVEALGP VELELILLMA SPQTDIPALL
61 ARAAAVLPGT RIVGCTTAGE ISAAGYTEGE IVAIGMPRAY FKAQTMLIDD LTDYDAQAII
121 DRMIQTRNDL AAARPEWGHE FNFLLIDGLS TLEDRLVSDL AMGLGPVPLF GGSAGDGERF
181 GTTFVFHEGR AHGNAAVLMQ VRTRCPIQVF KTDHLIPTEK RMVVTGADPD RRLVHEINAE
241 PAAREYARVL GKDPEQLTTF TFAAHPVVVR IGGQHHVRSI QRVAENGDLV FFSAIDEGLV
301 LTLAEARDMR EHLREELGRL AADGPPAVIL GCDCLLRRME AQQKQVLGAL SDILRENRVV
361 GFSTYGEQFN SMHVNQTLTG VAIYPPDDM
SEQDB ID: 3101377C
Reference:
3101377
Name: chromosome partitioning protein, Isotype: ParA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: parA
Sequence:
1 MSDLSRPAGP RIIAVANQKG GVGKTTTAIN LAAALVESGQ RVLVVDLDPQ GNASTGLGVD
61 ERELTTYELL VDDAPLNSVI QKTSIDGLSI VPATVDLSSA DIELISNEKR SFLLHDALRQ
121 TAMDAYSWDY ILIDCPPSLN LLTVNAMVAA HSVLVPLQSE FFALEGLSQL MLTIREVRQA
181 ANPNLRIEGI VLTMYDRRNN LSQQVEKDAR DNLGDLVFET KIPRNVRVSE APSFAMPVLN
241 YDPNSLGAMA YRDLAAELMK KHNKIAA
SEQDB ID: 3101377CA
Reference:
3101377
Name: Pro iminopeptidase, Class: EC3.4.11.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pip
Sequence:
1 MQYLHPPIEP FDQRMLDVGQ GHRIYVEQSG NPNGIPVVVL HGGPGGGCSP AMRRYFDPSV
61 YRVILFDQRG CGRSRPHASV TDNTTWHLVA DIERIRKTLE IDSWIAFGGS WGATLALIYA
121 QTHPDRVTHL VLRGVFLMTQ AELDWFYGGG AGRFWPEPWS RFAALIPENE RGDMIAAYHK
181 RLFSGDMAQE IRYARAWSAW ENALASIQSN GTTGESPGDY ARAFARLENH YFINDGFLEF
241 DGQILANMGR ISHIPGHIVQ GRYDMICPPN SAWKLSELWP NADLRMIRNA GHALSEPGIS
301 AELVRIMDAI AEEVTA
SEQDB ID: 3101377CAA
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTQAGTSPA QPFRSALIVD DHPLFCDALS MTLQAVSGIR TVQTLARLED ALDWLGNHPA
61 PDLVILDLNL PDVEGLDGLV RIRTAARAPV IVVSSMADNR VISGVIQAGA AGFVPKHSQR
121 EVFRTAIETV STGAVFTPEG FVDVAREGGD GPEVEDALAR LSALTNQQAR ILQLVCEGKL
181 NKQIAYDLSI AETTVKAHVT AIMRKLGVQS RTQAVLIAKK TSFSSFLPET QKQA
SEQDB ID: 3101377CAB
Reference:
3101377
Name: quinoprotein ethanol dehydrogenase, Class: EC1.1.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGWFGLERMQ GRKPMNKIIM AAVAGLVATA GWHSAALAAG VTEEDLANDT ANTSSVLTNG
61 MGRHLQRYSP LDILNKDNVK NLMPAWAFSL GGEKQRGQET QPLIHDGVMY ITGSYSRMYA
121 IDVNTGEELW QYDARLPEGI LPCCDVINRG GAIYGDKIYF GTLDARIVAL DLKTGDVVWN
181 KKIADYKAGY SYTAAPLIVK GLVITGNSGG EFGIVGEVQA RDAETGEMVW TRPVIEGHMG
241 TFKGEESTMT GTLNATWPGD MWKTGGGATW LGGSYDAETD TLVFGAGNPA PWNSWLRDAG
301 QNNDGKGDNL YAASRIGINP DNGEIKWHFQ TTPREGWDYD GVNEVVAYTD RDGNKRWATA
361 DRNGYFYVLN REDGKFVRGV PFVKDITWAS GLDENGRPIF NEDNRPGDPA AAADGAKGEV
421 IFASPSFLGG KNWMPMAFSQ KTGNFYVPSN EWGMDIWNEP ITYKKGAAYL GAGFTIKPNY
481 EDHIGSLKAI DPDTGELKWE FKNDAPLWGG VMTTAGGLVF TGTPEGKFIA FDDETGEILW
541 SFQTGSGIVG QPVTWEMDGE QYVSVISGWG GAVPLWGGEV AKKVNYLNQG GLLWTFKLPK
601 QLAAAN
SEQDB ID: 3101377CAC
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPVSYALAL MMAASPALAD TKFEQIKIEA GAALYDGECR RCHASDTDHE SYGPPLENVL
61 GRGAGTYPDY DYSIALEASG IVWTPAALRA WMEDNTGFMP GTKMRHVGIE DRTVQDFILA
121 YLASLSTRDP KQISD
SEQDB ID: 3101377CAD
Reference:
3101377
Name: efflux ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNAALIALRA IVLREALRFV RQRGRFVAAL VRPLIWLLVF AAGFRAALGL SITPPYQTYI
61 TYEVYIVPGL CGMIALFNGM QSSLSLVYDR EMGSMRLLLT SPLPRWWLLF CRLLASTAIS
121 ILQTYCFLAV AAAFGIQLPV WGYVAVLPAL VVAGIMLGAL GLALSSLIRQ LENFAGVMNF
181 VIFPMFFLST ALYPLWKMAE SSTLLRDICA LNPFTHAVEL IRFALYGQFN GPALGWTVLA
241 GTVFLGLAFW GYDPARGLLR RKG
SEQDB ID: 3101377CAE
Reference:
3101377
Name: efflux ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGLSVRNLD YSYGSRRALD TVSFDVAPGR FAALLGPNGA GKSTLFSLLT RLFTTRSGQI
61 SVAGHDLSQN PRAALARIGV VFQQPTLDLD LSVMRNLTYF AALHGLSGRT AHTRIAAALE
121 RLDLSERAHE RARDLNGGHR RRTEIARALI HDPSVLLLDE PTVGLDAASR KAITDHVHAL
181 SRERGLTVLW ATHLTDEIED DDQLLILHRG RLLQDGTAGA LRGALPLREH FLSQTSDKTG
241 EPA
SEQDB ID: 3101377CAF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMLKPCLAAL LVAALPLSAL ADGDDGRLGL AGLLSGKNKE DLPPIILSAG MPLADAPWVL
61 QSGTYYEFEI QGDGSQELAL VGPEFFRAIW IDEIVVEGLE IRPLGLDSVE FDEAGEMEIG
121 FVAIKPGRYY LKVPGSTGET QRLEITIK
SEQDB ID: 3101377CAG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTALALLAL TLAAPLGAEE IWVTNEKDDT ISVIDVATLE VVRTIATGER PRGITFSHDF
61 SRVYICASDS DTVQVMDPET GEILHDLPSG EDPEQFVLHP NDRHLYIANE DDAITTVVDT
121 ETRRVIAQID VGIEPEGMAV SPDGRIAITT SETTNMAHWI DTETRQLFAN TLVDARPRHA
181 EFVHGGAELW VSSEIGGTVT VFDVATQAEK AKIAFEVKGV HPDRVQPVGF ELTADEKTAF
241 VALGPSNHVA VVDTATYEVV DYILVGRRVW HMAFNSDKSL LFTTNGVSGD VTVIDVARRE
301 AIKSIKVGRF PWGAALRP
SEQDB ID: 3101377CAH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVHSLLRPI IAALAMAMAA LPALGEVQLR VAYLRQEVER PPVLSNLDPE PAGLGLDGAQ
61 LGLEDNRTSG RFLGQTYTLD TYEVPIGGDL EAAARAALAE ARMLVIDAPA EAVLRIADLA
121 EAEGALLFNA GAEESALRDA ACRANLLHTA PSLAMRADAL MQVLQRKRFS RLAMITGHGA
181 PDLAFAEALR RSAAKFGLKM VADKPWPFDA DMRRNASQEV PLFTQDFAEH DMLLIADEIG
241 DFGRYIAYNT WTPRPVAGSE GLVPVAWSRV VEQWGAAQLQ SRFWDLAGRD MRPRDYAAWA
301 ALRVLGEAVT RTNSTDPATL RAYILSDAFE LAGFKGRPMS FRPWNGQLRQ PIPVVTERAV
361 VMQAPVEGFL HQRSELDTLG LDAPESRCTA FQE
SEQDB ID: 3101377CAJ
Reference:
3101377
Name: cytochrome c550
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MINAAKAGAL SLCLSAGMAL AHGDVAPQPV NTDALPEVGE DWLIENPYRA ETAGEEVWAA
61 AIRIGDSGYN QNCARCHGLG VVSGGLAPDL RYLEAAEYGD EWYVERFRHG YTQNGITKMP
121 GFGDLLGQKA AWAIRTYIET RPDDGALDAH TPRLKEIRDQ LAAGEGDAAA LAAELSEIAA
181 EVETASGAPV ADSAASRAAS LISGAAPNFV AAAEALTIGL SAAH
SEQDB ID: 3101377CAK
Reference:
3101377
Name: AA ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSMARAGTLG AALAVLLLGA GLPAWAQTRC GDHVPQARPQ NAGRDIVGAD LDAIQERGWI
61 AFAAYEDFAP WSWEENGSVR GVDIELGRLI AEELGVEARF TLVAAGENLE ADLRNWVWKG
121 PIVGGRVANV MLHVPYDSNF ACRVEQVVFT GQYHVERMGI AFGRAEYPED KPVPAYFRFD
181 TVGVENDSIA DFYLTAFPGG QLRANIRRYP HMGAAMAGLA TGEVKTVMGP LAQLEHGLTP
241 ELDVHSPPLP GFATGSWTVG VAVHFAYRPL AYAVDDAIVA GIGDGRIGEI FGAYGLTFSP
301 PELR
SEQDB ID: 3101377CAL
Reference:
3101377
Name: carbon monoxide dehydrogenase operon, Subunit: G protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxG
Sequence:
1 MELSDSKVIA ADRATVWAAL LSPEVLKECV PGCQEMSGSP DEGFEATVVQ KVGPVKATFK
61 GGVTLSEMVA PESLTLSGEG KGGAAGFAKG AARVRLEEGA DGTTILSYEV EAKVGGKLAQ
121 LGSRIIDGFA RKMADQFFTR FQEVLEGPGE AESPEAEASG DAKKKGWFKR VISG
SEQDB ID: 3101377CAM
Reference:
3101377
Name: carbon-monoxide dehydrogenase, Subunit: small, Class: EC1.2.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxS-1
Sequence:
1 MPEINMVVNG RSVRGEVEPR DLLVDFLREG LSLTGTHVGC DTGQCGACVV HVDGVAVKSC
61 NMLAVEAAGS EVSTIEGQAA PDGTLNALQQ AFQDHHGLQC GFCTPGMVMS AAALLKDNPT
121 PSEAEVRAHL EGNLCRCTGY HNIVRAIMAA SGQDVSGIAA E
SEQDB ID: 3101377CAN
Reference:
3101377
Name: carbon monoxide dehydrogenase, Subunit: large, Class: EC1.2.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxL-1
Sequence:
1 MPKDSGIGAS SKRREDVRFL TGAGNYTDDI NLHGQAYVHF LRSDMAHGRI VSLDTAAAAA
61 MPGVVRIFTG ADFEGVGGLP CGWQVTDKHG EPMQEPGHPV LAQGKVRHVG DPIAAVVAET
121 PDQARDAAEA IGVEIEELPA VIDMKAALAE GAAKVHDDLS SNLCYDWGFV EENKGAVDAA
181 FAEAAHVTTL ELVNNRLVAN PMEPRVAIGD YARATGDSTL YTTSQNPHVI RLLMGAFVLG
241 IPEHKLRVVA PDVGGGFGSK IFHYAEEAFC TFAAKALARP VKWTSSRSEA FMSDAHGRDH
301 VTRIELALDA QNNFTALRTE TLANMGAYLS TFAPSVPTWL HGTLMAGNYK TPLIYVNVKA
361 VFTNTVPVDA YRGAGRPEAT YQLERVIDKA ARELGVDPIA LRRQNFVTEF PYQTPVAVVY
421 DTGDYNATMD KLEEIADLSG FAARRAESEA RGKLRGLGIN CYIEACGIAP SNLVGQLGAR
481 AGLYDAATVR VNATGSISVM VGAHSHGQGH ETAFPQVVAE MLGIDESMIE IVHGDSSKIP
541 FGMGTYGSRS LAVCGSAMVR ATEKIINKAK KIAAHLMEAS EADIELKDGQ FSVAGTDKSV
601 AWGDVTLAAY VPHNYPLEDI EPGLEETAFY DPSNFTYPAG AYACEVEVDP DTGKVTVERF
661 SAADDFGNIV NPMIVSGQVH GGLGQGIGQA LLENCAYDPE TGQLLSASYM DYAMPRADDV
721 PFYAVDHSCA TPCTHNPLGV KGCGEAGAIG SPPAVVNAVI DALQSGGKTV THIDMPMSPS
781 RVWSAMQG
SEQDB ID: 3101377CAP
Reference:
3101377
Name: carbon monoxide dehydrogenase, Subunit: medium
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYNFEFERPG SVAEAVAALK TEEAQALGGG QTLIPTLKQR LAAPAKLVSL GGIAEMKGVC
61 RNDDGSLSIG GGTTHAEVAR AAAAHYPALA ALAGGIGDPA VRNRGTIGGS LANNDPSACY
121 PAAALGSGAT IVTDRREIAA DDYFQGLFTT ALEEGEIITS VRFPVPEKAN YQKFVQPASR
181 FALVGVFAAQ TADGTRVAVT GASEDGVFRW SAAEAALASG ASIDGMAPEA DGMIADLHGT
241 KPYRAHLTGV LTRRALQAMA
SEQDB ID: 3101377CAQ
Reference:
3101377
Name: regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRALFLSFCL MLTTLAAGAD PLTPDQIASY VKPPLLLGEE VDETGVYALI DVYGKPAGYV
61 FETEPLAPLP GFSGAPVNLL VMLDATGSFI EVRLIEQNEP IFVSGLGVAP FEKFLEQYRG
121 LNIASPMVVG TPYGNSGGGA SALTYLDGVT KATASIRIAH ETVLAASLAV ARERMQGVAT
181 APPRAPDLDH DEPLDWAALV AQGIASHHLV SNARVQAGFD GTLWAGDDPE ALADPEAAHV
241 DLWILDLGPP AIARAVLSAQ ALEELQQFQA LSPHDEPLLL IESARHGLVG EDFVRNTAPD
301 LISAQQGGLP VALRDADLFV ELAPGLPEGR AMILRADRRL GFDPTSEWEL TLQIQRAHGS
361 FQPVIGSRSF GFTHATPERF FLSETGPSAL PPWQEALRGR AGDLGLLVVF LGGLIPALLL
421 GQSRLAGLRT FVPLRLGVLA VTLGFVGWWA QGQLSVVTPL AVLRGALDGG SLAFLLYDPV
481 SLLLWGAAVL GFLLWGRGLF CGWLCPYGAM QEFAHHLGRW LHLPRLPLPD AWDRQLKWLK
541 YAVLATLVAI VLLAPAELET AAEVEPFKTA ITTFFLREWY FALYAAAWIA LSMVTFKGFC
601 RYVCPLGALM AIGGLLRLRR WIPRRPECGS PCQLCRVRCN YRAIRPDGEI AYDECFQCLD
661 CVTIHDSPTQ CVPLILARRR SEARAQNLW
SEQDB ID: 3101377CAR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIAAALLAI ALTGLSGAVW AETSAAIVAR KPDLFHPETG LRIDRQRAPV PEDIPPPARK
61 ISALWARKLI ARGALALDVY GAAQSRYDEL DGTWLVPEPR QSLPGAVWLP EVGRGVLDAA
121 LQVYLERELE RLTGGSKARA IVVFCVADCW MSWNAAQRIA GMGYLQVYWF PLGTDGWREL
181 GWPLEPVEPV PVPVD
SEQDB ID: 3101377CAT
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSRRALLAG AAAGLGLTAL PAAPVFAQAK LRYDLAPIPV LPGVWMIEGV TDYFDKVNGG
61 AIVNCAVLQG QSGLILIDSG PSRRYGEALA ATLRALDLRG VSAVVNTHHH PDHFFGNQVF
121 ADRPILALGD TLAAARRDGD AFADNMYRLL GDWMRGTEPV PPNTALDGGE VTIDGRRFAT
181 LPLSGHTEAD LALVDVETGL LITGDLAFLD RAPTTPHADL AGWQQALTTL EGLGAPAVLP
241 GHGPFDRTGA SLRQTRAYLS WLEATLHDAA RTGLDMVEVM DLPLPQEFAA MGAQPQEFHR
301 SVAHLFPGVE RAVLPRAN
SEQDB ID: 3101377CAU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRYGLSLCA TLLAGAALAA DTPQVPLDDP FASGMWEDHQ IAILGDPADI RFDDRVRVFA
61 PAAAEDAFHV PLLIDATAIP DVEEIVVTAD YGPIPKILSY FPGEAQAKLA LRFKIDQATA
121 VRASVRTKSG SWHVGGTLID AAGGGCTAPA EAYASDDWEE KLGEIHGRLW AATGRARLIV
181 DHPMDTGLAD GIPVFIIRDL SFTNDAGQEL ARLALSEPVN EDPAFTLYFD PARMPPLLHV
241 SGRDNNGNQI AGTLTGEEVN
SEQDB ID: 3101377CAV
Reference:
3101377
Name: AcrB/AcrD/AcrF family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEGSQNTPL GIAGGLTRGF IGSALTPLMI LAALAMGLVA LISLPREEEP QISVPLVDIH
61 IQAPGLKAED AVKLVTEPME TIVKAIGDVD HVYSQTGDDY AMVTARFLVG TPADTAILRV
121 HDKVRANMDR IPVGIGEPLI VGRGIDDVAI VSLTLSPRDG AGDVSANDLT RIARELQVQL
181 AKIGDVGLTY LVGEAPEAIR IAPDPERLAL YGVTLQQLAA KVEGANRALA TGLVRDGGEQ
241 IALVAGETLH APAEIANLLL TTRDNRPVYV RDVADVRFVP DTSERIVANV TRDDSGGFRR
301 SPAVTLALAK RAGANAVVVA EEILHRVHLL EHDLIPDSVE VTVTRDYGET ANEKANELLF
361 HLGLATVSIV VLVLFSIGWR ESIVVAVVIP VTILLTLFAA WVMGYTLNRV SLFALIFSIG
421 ILVDDAIVVI ENIARHWAMP DSASRTQKAI RAVAEVGNPT IVATLTVVAA LLPMLFVSGL
481 MGPYMSPIPA NASAAMIFSF FVAVIITPWL MVKIAGRAPA HAHDAAAQHG GALGRLYRAV
541 ARPLLRTKSG SGLFLLVAAV LSFGSLGALY TRDVTVKLLP FDNKSELSVV IDLPEGASVE
601 DTDAVAQQVA RRVLELPEVI SAQTHAGDAA PFNFNGLVRH YYLRARPELG DVQINLLPKD
661 ARTRTSHDIA LDIRERLSTL DLPEGTVLKT VEPPPGPPVI ATLLAEVYGP DADSRRAAAT
721 RIREAFESVP FVVDVDDSFG TQARRLRATV STDQLEFFGV QERDVFSTLA ILNAGQTVGY
781 SHRGEGRRPI PIEVARDSAD RVVDERFLST PVPANVLPGA RGVVELGDVV ELREERASYP
841 VFRHNGRAAE MVMAELAGDF EAPLYGMLAV AEALDAMDWP EGGKPQIRLN GQPEDESVIT
901 LLWDGEWEVT WITFRDMGAA FGVALLGIYI LVVAQFGSFR LPLVVLTPVP LTFLGIIIGH
961 WLFNAPFSAP SMIGFIALAG IIVRNSILLV DFIRHANPER DKIETLIEAG AIRFKPILLT
1021 AVAAMIGAAV ILTDPIFQGL ALSLLFGLLS STLLTVLVIP AIYRVFKT
SEQDB ID: 3101377CAW
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKMILPALLL CLAALSAVPA LAETTARRVT VTEWKTVFAK VEPRDSLPAR SRLGGTLQEI
61 TVAEGSAVTR GQQIGTTVDE KLELELRAID AQLSALGSEL SNAEAELARG QNLLERGVTT
121 EQNVDALRTR VQVIEGRIGT TSAQRDVLLQ RTDEGRILAP ISGTVIDVPV TEGSVVLPGE
181 MIAVIGGGGF FLRLAVPERH ADFLAEGDSI AIAGIEGAET GTLAKLYPQI ENGRVIADVE
241 VAGLSSKFIG RRVLVRLPVG RAEVVAVPPA AVASRMGLDF VRVARPDGSA SERVVVIGTP
301 VEAEGEPLVE ILSGLKGGEV LVAGHE
SEQDB ID: 3101377CAX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFRIEEKIV LTASDMARLQ ADLQARGMVP LYPARLIRSV YFDTSGLQMF SDSEEGVLPR
61 KKVRLRRYPE QADAGAVLET KISSVEGRFK TALPVAPETE RRLLRQGHFD RDYGTLQAMV
121 AVSYRRAYYS LDGLRITFDR DIAYARPDGQ TARREAWTVC ELKAPAEAPL DALHHILPVP
181 RRRFSKFCNG VSAVIARA
SEQDB ID: 3101377CAY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWRRLRPLAL LPALLLAPAA EAGCDFATGQ YRAELADIAS IRRIEVNVDK ARKWARNGLR
61 IITSEGEQIA PKYKRSFAGT VSVFYDFGRC DFAARLRQNG DFKDHVELDR GRLLQSLNIR
121 LDEGNIAHAV RFKLFLQKTR NAENEVLATL LLSRLGFLAP RTRVVDVVQN GTPVRMLWQE
181 TVAKEFLEHN RRREGPLLEG DEALLALWSD RGGYLLEDLG LARVVNGKWV ERGAASVAMT
241 VEAFTRLQTA YATYGNSNAL DPSQALTGLP LPDTTSAEAA RIWWDYAALM FAMRASHGLR
301 PHNRKFYWNA FLQGIEPIYY DGEVDLKRSK PRYLRARDRT LYAPHFTADR MARLAAAVAA
361 LDGEAFGARY RALCAGGCAP EAGGHFLTGV AANLPALVLP AEGAPPALAD PWPGFTARLF
421 DHLPEIRSRD IAAPDPASGI ATAQLCTRGG CTAQRLDRET LVEALSGAVI DGVEPVMTLG
481 AQAPGGMVYR TTPLTGWDLT LRHSPGLKVT SDPQGGRLVL TQTAPDDWAL LMGDRLEGVE
541 IAFRGLPPPP ALNGGDAAPE QRFNPYGLTG CLTLYGMRLS QVRITATGGG CEDSVNIVSA
601 RGDIALLDVQ DAVSDAVDMD FADLHVAEAR ITGAGNDCLD LSGGQYRFDR VLASACGDKA
661 VSVGEASEVA IGDLEASASA IGISSKDGSG VTVGQARIGA TLHCYEVFRK KQEFPGAYLR
721 LDPAPCSGPA GRVDAESVLD LQGDSG
SEQDB ID: 3101377CB
Reference:
3101377
Name: 3-demethylubiquinone-9 3-methyltransferase, Class: EC2.1.1.64
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ubiG
Sequence:
1 MQAHPNTVDP SEIAKFEAMA AEWWDPHGKF KPLHMLNPCR LDYITRQIAG EFDRDLGTER
61 PFAGLRLLDI GCGGGLLSEP MARLGAEVVG ADAAEGNLPV ARIHAEQSGL EIDYRHTTAE
121 ALAEAGEQFD VVLNMEVVEH VADPLSYLRA THDLLKPGGL QICSTINRNP KSYAMAILGA
181 EVVMRWLPRG THDWSKFITP DELFDLLRQA GLEPVDRKGF VFNPISWQWS ISDRDLSVNY
241 VTASLRPR
SEQDB ID: 3101377CBA
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWCACCMARV RRCRISGLPH NLGGGDMGVL TSELDKLLAV ALLLCASLLV RQAVIFSGQT
61 WIRTFSHTLT LLLLPLVTYS LTSVISGNIA LSLGMVGALS IVRFRNPVKS PLELVTYFLM
121 ISCGIAAAVS VSWLVLLVGS AVGTLVVAEL FNRWSRRVRG VALYTTSFTE GNALHTLEVF
181 SETEMPDLLA HAALVGFDKT PEGIVYRFAS PSRQDLLTLS GAVNGQTGIT RIAFAAA
SEQDB ID: 3101377CBB
Reference:
3101377
Name: integral membrane protein, Isotype: MviN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAARLLANI VLMTALKLVG LLLSVLLIVL QTAAFGTTPA ADAYFTVRRF VLSAIAMTFE
61 ATNQLAVPEF VREVQGGGHS GMRRALMRFG IPIIGLLCLI ALALWVFAEP VVRLLAPGFD
121 DDRLAKAAEL LGVVALCLPL TGIAALAGAF NFARRRFGLT TLARLLPRVA LLPVLLVAGA
181 AVTPLSLSWA LVIGVALMAL MIAVQGWRDL RRMGGGGLTT PRRPSTPRRA AAVTINAAAQ
241 MAMGWADAAL ASLTGLGGVT IMFVAQRLLS AAPGAVNSAV NSAYYTEYSH AAGAEAGARP
301 SIAAAVRISL FLTLPLVAFV MIAATPLITF LLERGAFTAE DTAATADLVR FLAPLLLVNA
361 VLAAFLPAVL ADDGLPLVRV FLWFSAAALL IRFAAGLPLG ALFGLKGVAS SILLASTGSA
421 LVLARALHRR HGTLGSWQDL RQIALMIGAA VAAALVSALL WQPFGLGDLV LLCAHALTVA
481 ALFLAGCALC RLPEIEALFA LLRRRRHRG
SEQDB ID: 3101377CBC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSALACNMK YSSHPAAVAA GRGGNRRGGR MYAYERITDP AGFAAIEDEW RALAEACGGG
61 GVFASHAFLL SWAETFGQGR RLAVSLLRHK GALVGALPMF HTGQARAVAA MGEGRAGMAQ
121 WLLHPDLPDA DAALAALLRP DWLSFWRLEP LETPDAEALE RAARRAGLAV RRKATMRACS
181 VTTEGDFDSY LGGLKSKTRQ VFRRSERKLA EMEVRDLRSD RDGRAALDAY LAASRASWKG
241 LTGTGYGAAP EGVAFVEKLF ERLGPEACYL AARQVGEVAI SGRFVLVHDN MHYGMANDFN
301 EEYADLAVGR NSIMQSVRDA FEGGAAGFDF TRCNGLVREV STDERPLERV LIHRRGDPTL
361 AAFFAARGLR RLRRKASGWQ KGRRGVVS
SEQDB ID: 3101377CBD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYPLFRSLVL LLIAATAAQA APLVEHHATA PDLMARPDLR LQQQNGTLAP APDPVGARQV
61 IRARAGAKQA GKVGKAALIL PFDPLGPGSR IRVTAELFLP PGTPANSIHL FDLECKFCGQ
121 PGNPGLRLYL RHGRLRVDRK KIGGGHAWAD DSAPALTSGR WHLVTWDLRL GTDAAPGHSQ
181 VYLDGKSVLD NRGRTLPDVP AERAAIDRLQ IGITANSNPE TVTLYLGAVT LERWP
SEQDB ID: 3101377CBE
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDNSPVTPPR LAIVLPHLRS GGIEISTLAL IRQLQDRRFR IRLILGSRTG ELLDQIPETV
61 EIVDLGGRRA MASLWALRAA LAGMDAVYSG TNARNIAALL AARLLPAHQR PVVIISEHSS
121 PAAYLAMARH PGPRRWLMRR LYPLADLLAV PTEGLGADWL AALALDRPAV ATLPNPVLSP
181 EAMALAQTVA EGNGPPRDPA LVLAVGRLHP AKGHADLIQA FARALRTRPE LRLTLLGEGA
241 ARPELEALIA ALGLQHAVTL PGYSPDVARH MAGAGLLVLP SHREGFGNVV VEALAQGTPV
301 LATDCDGPRR LLAQAGAAGR IVPIGDIDAL ARGIVEMAGQ PEPLRAAQTA APTLSARYAH
361 AAAAQTFADC IAPLAARRRG
SEQDB ID: 3101377CBF
Reference:
3101377
Name: bacterial sugar transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIDIYKVDT DLAGVDGGRR LFDAIAPLPA QVYREAPSVQ GLRDGAFVAQ PPLVRPHKGP
61 AAPRGLMSPA TVRSGYVPRY PLFDAALNRV LAALAVMAVA PVLLFLSCLV LLSSGRPVFY
121 SGVRLGKDRK PFKILKFRTL VPDAAAQTSR STLPKRTLLE TNIGSYLRKS RLDELPQLIN
181 ILRGDMVFFG PRPVRPELLD LYMREASGFA LRFNVKPGLV GMSQALLPHS AGKRLRGRFN
241 SLCCRAPMNY WATLGFVLHV GVTVLRRAGR GVLDMVLHLG SPAMRFNFLR SGFHRPRHTV
301 AQFEMEGETV TAGVVGISDQ IVQFVSPLPP RRRRYALTID RKLASGRHLR ISVEVEVKSV
361 FPLGVGKSGF LCHASYAAGS PYQRYRIERY LLDETVLST
SEQDB ID: 3101377CBG
Reference:
3101377
Name: polysaccharide deacetylase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSDARSLTA HTTARRATRR RLLVRLLAVA LVSGLAGGAV AALTGAAGWA FGLLAAVSGY
61 LVAARLWRLE PGVPVLTYHS VSDNAAWLPW RAEISIRPAS LDRQLRLFRR MGLQVVDSET
121 LVRARLAGRP VPGNWLALHF DDGYLDNWVA AAPILRRHGA CATLFVSTDF IAPPQPLRPM
181 LGQDGPLRWD GYLSWDELRA LEAEGTFRIE AHGTDHGRIA TGPETVDHLT PENAGRLSWM
241 QWARMPGDKH DWYLRRSRPV PLGSAVPISA PALAARGWSP ATGQESDAAY DARVRAVLAT
301 SRTLITREMG RAPVLFCWPQ NQTSDRARVL AQQAGFLATT AGQARNTATD PAATLSRLHI
361 GEDYAGLRCG WIDDLAVRAQ IRCFQGFVGW VAVLGAVGAL RRIVRVLVRL RSHGRRTGSG
421 ALQEGMS
SEQDB ID: 3101377CBH
Reference:
3101377
Name: glycosyltransferase, Isotype: group 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLAVIVTEF PKTTETFILR DLMVFLEAGV DLRLYHLAPW RNDQILHDFG AEAGRCARHV
61 PLVSPRSLAA LAAHPLTAAR LAGSIALHQG REAKFAAKSL ALLPAAMRLG QELRDWGADH
121 IHAEFAGHPA TAAWIAHRVS GVPYSISCRA HDIFRSQRLL EQKFADAALV RAVSTYASRF
181 LAEHVPGIRQ QDVAVIHSSV DVSAITPSAP PPPEDGFRIL YVGSLQQRKG VDVLLKALAG
241 FDRPGWQLDI VGDGPDRAKL EALSAQLGLN DRVHFLGQRP FGEIDGFYRA ASVCVAPSII
301 GPNGRTEGIP NVMIEALAYA RPAISTNVSG IPELIRPGET GWLTEPGDVA GLTAALTEVH
361 DAPEAASKLA WKGRALVERE FDLRVNARRQ LELFAAARKG QAPQGARTVT P
SEQDB ID: 3101377CBJ
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAPRPIFVL GLQRSGTTLI GNLLAAHPDV AAATDPHHRG IHESVFFSHF ARAWDWRDPA
61 ARARAVAAFL DSDYGRLLDL TAEDCHRLER IGDPEVFFRQ AMSAHARQQG ALAWVEKSPH
121 HVHEAARIAA AYPDARFVAI HRDSAGLVRS RLWAYGRVPR AGLARLPAVL RGALSNAYHR
181 RVLRRFAHHF PDRVVTLEYR AFVAGGAASV AAMIAALGLP SAPGLAPEYA PNSSFAGPDA
241 AASLTRIDHA AIALAGVLCA LVPLWLLDRL RAGASSRRRL EFPRWVWSGL VPPPASHSGP
301 SLAVPLGADT MTHMQENPSP CRD
SEQDB ID: 3101377CBK
Reference:
3101377
Name: chain length determinant protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIHDLPSPAR TRPADPTGPR DGANEAPRQN EAGAAIRHVA ELMRQSRRMI LLLMLGCAAL
61 SCAYAVYKLN FSPVYRASAK VTAQPTDAEL RYSQVYVRSS SLDSANVITR SHIEYLKSRE
121 IAERARLEVF GAAGAAPEEQ QIPALLAFAK TAKQQVEAGL RWLNSGSAGA AAGEKDLVTE
181 IQDAIELRMV ESSFVMEISV AWEDPKIAAE LANVLARVYR TRSREQVAAT TGELTSFLET
241 QKLATERRLS DLIDERNALR TASGVVEIET ERRELLARLF AESAQRDADR RSLLAIQAQL
301 RAFLPDRPLN RHDGLTQTTK EELNLSRLRE VELDAAVVES DKIVARLEQR IAALAKLETR
361 FEGLNSEIER TRGQLNDIDA RLLEVRISEA ESIETLRIVD LATPPALPEE PKVVNRTVMG
421 AMSGFLLAMM LVLSRDYMAT RLRTQTDLSG VSGLRVLSPA ALGAAELTGA PAAEEKGATA
481 SELSRPYLDW DALDTDDMVA VLDISDPRRA EAVGRRVMQC YPYSDQVHTG LLRRAVRPGN
541 MPPSAAVLIT LGRDELSAGE LRDYLDQLRA LSRALPVAVA FVDIRGRVG
SEQDB ID: 3101377CBL
Reference:
3101377
Name: O-antigen polymerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPAPRQLAL GFGGALLAAA AALSGPALAV GALAGALAGF AVLGNTVLGA YLLVALAQLD
61 GIALLVDRHL PISLFKLVSA LVLLSLVLTV RRHPLMQGRL RLSPTAMFTL LFAIWLCVSY
121 LASDWRAYSY DHTKGFLQTL LLVPILGLTV TAPRHLRRMV LVIAASGAIS AVFVILETVF
181 GLRLLPYADE GDVAAWLGAV RSAGASAYNP TTASHLMAVS LMLALVMALH DRRGRRLWVL
241 ISLLCLVALP MMGARSGAIA VAMGIGLIGF RMRHHRLFPA VALAAVGALV FAVLNAPDTL
301 VERFGVLGDF LGEGDTADRS LLRRLSYNQI GLSLWAENPV TGLGPGAYPV NYASDAFRWY
361 PGREAEARQL HNAYLEVAVE TGIVGIALFL GALLSAAWAA LKAGLHPVSE VQVLAQALGV
421 AMAVFMFASL FMPNEDIKYT WILAALCARA AQLARGWRPD AGQGS
SEQDB ID: 3101377CBM
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLLFWTCLG LILFSLVGYG LLWIGLARLV RDRPTHPPVT QSATVLIAAR NEARDIGAKI
61 RSLRAQRRGA HRVRVLVVSD GSEDATLAEA EAAAAGDRDI QVIGLSQHGG KAAALNHGLA
121 MIPEGEIVIF SDANSLLDED ALIRLLAPFA DPGVGGSIGQ LGIKGRDGLM ARAERLYWRY
181 DNALKRAEDR IAGTVSAQGT LYAVRRGLVG VVPADMADDL AISLGVVARG YRLAYAPGAV
241 AREAVTSNLR GEFGRRVRST ERGWRGLMHY GGLMNPARTG LYAVQLFCHK VLRRLVAVLL
301 PLLLLSNIAL LDQGMFYVVT FLAQIVLCAV ALAAVSTVWG KRLPGASVAV LFVMGHAAIF
361 WALLRYAMGV RSTKWAPVRG
SEQDB ID: 3101377CBN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRPKTWHSL PEYFALRALM QTGTTTGAAH QLGLSQSAVS RSIASLENRL GSPLFEREAG
61 RLRPTQEAVR LNLRLDPLFE ALDRIDGQTE PVRETLRLIA PPSYAHRFLV AQISSFMEMN
121 PAFFVSFEVN TSDEVTRGIL DDRFDLGISG IEQSRAGVKT MPYRVSGAVC AMPTDHPLAR
181 RGQIGPADLH GQDMIALTRR HVRRGQLERL LHQARATPRI VAEVSTSFAA ADLAREGVGV
241 TVINPFPIYH YRAGDLAFVP FASDLEYRSY FLVSETRPMT RPARAFMRHL RLNTPPDPFS
301 RKA
SEQDB ID: 3101377CBP
Reference:
3101377
Name: renal dipeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPATHPAIID GHNDVLLKLY RAGGLAQAGS FLTGRDGALD LPKAQAGGFG GGFFAVYVPS
61 PMDREARDAE MTNVSYDLPL PEPIDWEDAL PVVLSQAAIL FELERQGALS VCRSVGEMRA
121 ALAAGRIAAI FHIEGAEGID PDLHMLDVLH AAGLRSLGPV WSRNTIFGHG VPFRFPSGPD
181 IGPGLSDHGI RLVRRCNQLG ILVDLSHMNA AGFWDVARHS DKPLVATHSN AHALCPISRN
241 LTDDQLRAIA ESDGMVGLNF AVAFLRADGR KLSDVPVETM LRHLDHMMGI LGEDGVGLGS
301 DYDGAIVPEA LTTVADLPVL RQAMADHGYG AVLIDKLCRD NWLRVLERTW GG
SEQDB ID: 3101377CBQ
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNALNRLLSS AVLGAAVLMT APAPMAMAET PPNMLVIAHR IDDITTLDPA ESFEFAGSDL
61 SRNVYMRLVN FDPMDLKAGY QPEIAESWTV SEDKRSITFT IREGLKFHSG NPVRAEDVEF
121 SLQRAVILNK TPAFILTQFG FTAENAAETI KAEGNTVTIT TDKPYATSFV LNCLTAVIGG
181 IVDKEVVMAN EQDGDMGNTW LKTNTAGSGA YKLVSWKPNE SITIQSNPDY YRGAPAMERV
241 IVRHVQESAS QRLLLERGDI DIARNLNPED IAGARNAEGV KIDEELKGRL MYVSLSQKHP
301 ELSKPQVRQA FKYLVDYEGM KNSFLSGQYT IHQNFLPQTY LGASDAAPFT YDVEKAKALL
361 AEAGIPEGME IEVGVREAQE RIEIAQSLQN ALGQVGIKMN ITIGTAKQIL SRYRARELDV
421 YLGAWGPDYP DPHTNAGTFA YNPDNSDAAQ ATGLLAWRNS WDTGGLTAKT DAAVVENDRD
481 MRAKMYEEIQ AEFRETSPFV IMFQQIEQSA QRDNVMNFST GQAITSASYW QVTK
SEQDB ID: 3101377CBR
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALSENNRER RVRASLSPWL KGVLVALGSV SITMLGLLLI TFIIGRVMPI DPVLAIVGER
61 ASQSTYDAVY EQLGLDKPLL VQFLYYLWDV LHGDFGMSLL NARPVSEDIA RVFPATLELA
121 TLGTLIGVLL GVPLGVIAAV RRGSWIDQIA RVVALVGYSM PIFWLGLMGL LIFYGVLGWV
181 GGPGRLDIFY QDIVPTRTGM ILIDSAIASE WGVFRNAFSH IILPATLLGY YSLAYISRMT
241 RSFMLEQMSA EYITTARVKG MSERQVIWGH AFRNIRVQLI TVIALSYANL LEGSVLTEII
301 FSWPGIGSYI TTALLSADMN AVLGGTVVVG LIFICLNLFS DLLYRVFDPR SK
SEQDB ID: 3101377CBT
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETLTLRQW LLTDEPTSRR HARLASLYKG WLTLRGNTMA MFGLGILVAL VLMALFAPLI
61 APHDPYVQNL GNRLQPLGSP GHPFGTDSLG RDILSRLIYG SRITLYIVTL VALIAPVAGL
121 LVGTVAGYVG GWADVVLMRI TDIFLAFPRL VLALAFVAAL GAGIENAVLA ISLTAWPPYA
181 RMARAETLTI RASDYISAVR LQGASPVRII TRHIWPLCIS SLIVRVTLDM AGIILAAAGL
241 GFLGLGAQPP SPEWGAMISE GRRFILDHWW VATMPGLAIF TVSLAFNLLG DGLRDVLDPK
301 EGSQ
SEQDB ID: 3101377CBU
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLLEVENLW VKFPTRQGVV EAVRGISFSL GRERLGIVGE SGSGKSMTGR AILRLIRPPG
61 MIEADRIALE GQNLLDLSEK DMRAVRGERI SMVMQDPKFS LNPVMRVGDQ IMEAYLLHNK
121 VGKAEARKRS LEMLEAVSIR DPERVMRAYP HEVSGGMGQR IMIAMMLIPN PQILIADEPT
181 SALDVSVQRQ VLNIMDDLVK QRGMGLIFIS HDLNLVSEFC DRVLIMYAGR IVEVCDADKL
241 HQATHPYTRG LLNSLPRLDQ PRAKLEVLSR DPAWSDAPSV GGRA
SEQDB ID: 3101377CBV
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMIEIEGLN VWFGHGIDRV DAVRGASFSV ARGESFGLVG ESGSGKSTIL RAITGLAPDW
61 SGRVTIDGQA LAGGKRDRAF FRKVQMVFQD PYASLHPRHS VDQVLSETLH LHGIPDIDTR
121 VRSLLDDVGL GGRFRFRYPH QLSGGQRQRV AIARALAGEP EILLLDEPTS ALDVSVQAEI
181 LNLLTDLREE HNLTYLMVSH DLSVIGHMCD RLAVMKDGEI VEVMDVAALR DMRAEHAYTR
241 DLLAASVAPG VRTA
SEQDB ID: 3101377CBW
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLFREIAAN DPGPTGRMKN MKTFTTALAT GVLALCPLAA LADSSDPIVI PIHNWSSQIV
61 MSNVVGQIFE EMGVAVEFVT TDSQAVYESV RLGDVTLELE VWEGAFGASF RAALEKGGIV
121 DVGDHDAVTR EDWWYPMWTK DACPGLPDWK ALNDCAAVFA TAETGDKGRY LDGPVDWLKH
181 GKERVEALGM NFEVINAGSA AALWAEIGAA EADKRPVVVF NWTPNFAEAV WPGEFVEFPE
241 WVDGCDKDPA VGPNPDALYD CGNPATGYLK KAAWEGMEAK WPDAYAVLTR ISFTNPQIAE
301 MAKLVDVDEM EPDEAAEAWL EANEDVWRPW LDG
SEQDB ID: 3101377CBX
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.32
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFMGSPVIS ARNVWKIFGK DPVGYLKTLQ PGRSFDDIRA DGYIAGVRDV SLDVARGEML
61 VIMGLSGSGK STLVRCFSRL HEITGGSIEV DGQIIGDLSE KDLIELRRNK MGMVFQSFGL
121 LPHRTVLDNV AFPLEMRGQD RHTRRKRALE VIELVGLAGR EDYFPRELSG GQQQRVGIAR
181 SLAIEPDIWF LDEPFSALDP LIRREMQDEF LRLQAMLGKT IVFITHDFDE ALRLADRIAI
241 MKDGAVEQCD TPDQIVMNPT TGYVAKFTEE IDKARVVHAG VLARAGVVGE GQPVEAGATV
301 QQLARLLVND SRDLIPVADK GQVIGALDRQ GALDILLKAS
SEQDB ID: 3101377CBY
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVTTTETTG TAPALPRKTL GLAMIGLAVM MTLLHYAGLL PAWLHRLPEA IIPPFATWLD
61 AIFNFVKDDL GLLALTRLLT DGLEVVLDAT ANLLFGKRRW PNIGPIPWSA IAAMTAVVGY
121 YLGGWRMALL AGGTFVWTAM IGQWDIAMQT MSVLVVAAPL AFAIGLVLGI SAWKSPSFDA
181 VLRPVLAVLQ TLPFFTYLLP AVIFFKVGPT AGAVATTVYA IPPMILMTTL GLQKVSPEVV
241 EAGKMSGCTR WQMLRHVYIP AARTEILVGV NQVIMLCLAM VVLTAFIGMP GLGAKLLAMM
301 GSFKIGRSFE IGVTIVLLAV TLDRMSKAWV VKLPEHFERG TPFWIRHKFL LMAIGAFVGF
361 TLIAQVVPIL SEVGRKQSWS QGKEIDTLIK GFLAIDAVQA ITNSIRYVLN IWVLNPLRDF
421 MLSIPTVAFV LFISAAALLV AGRREAVLAA AFFGLVALTG WWDRSVITLY SVLAAVSIAL
481 LLGVPIGVVA ARKEKTANAV LLACDTAQTF PSFIYLIPAI MLFGITATSV VMSILIFSMV
541 PLVRYTIEGL RNVPDEMTEA ADMAGATRMQ KLWNVQLPLA LPTMAVGFNQ AIMFAFFMVI
601 IAAFIGTQDL GQELQRTLAG TDLGKNFVLG ICVTLMALTF DMVIMKWADD KKARLGLN
SEQDB ID: 3101377CC
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADEIHTLAV SLFSEILTAD QLLRNRLSRV LPKGMEISHF SVLNHLVFVG DERTPAQLAS
61 TFHVTRGAMT NTLAKLEWAG YIHIRPDWDD ARRKMVAISP AGRQARDQAI SMISPLIDQV
121 VGELGAERVR LALPVLRDLR IKLEIN
SEQDB ID: 3101377CCA
Reference:
3101377
Name: flavin-containing monooxygenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTSKRVAII GAGPSGLAQL RAFQSAAAKG EEIPEIVCFE KQDNWGGLWN YTWRTGLDEN
61 GEPVHCSMYR YLWSNGPKEG LEFADYSFEE HFGKQIASYP PRAVLFDYIE GRVLKANVRD
121 WIRFSTAVRW IDYNDETGLF KVTVHDHTND RVYSEEFDHV ICASGHFSTP NVPHYEGFET
181 FNGRLVHAHD FRDAREFAGK DILVVGSSYS AEDIGSQCWK YGAKSITSCY RSAPMGFKWP
241 DNWEEKPALV KVDKNTVFFS DGTSREVDAI ILCTGYKHFF NFLPDDLRLK TANRLATADL
301 YKGVVYVHNP KMFYLGMQDQ WFTFNMFDAQ AWWVRDAIMG KIDLSNVTKE QMLADVTERE
361 TREEASDDVK YAIRYQADYV KELVAETDYP SFDIDGACEA FFQWKKHKGE DIMAFRNNSY
421 TSVITGTLAP VHHTPWKDAL DDSMEAYLRN
SEQDB ID: 3101377CCB
Reference:
3101377
Name: ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLPGGVVEI GMLSSSFAHR MAVTSLFPQD RVGMSDPIKI GFLAPLTGPV SSWGLPGLHG
61 CRLWEDWLNR AGGILVGGRR YPVSIVPFDC GYDPERAMEG ARHLVHTEQV KLLMMLGGDT
121 FTPLRGFLTA NKVLTSTLLP SDLSPDTRYL IAPSEVHPIY NVTGVDWLAR NRPELRRVAM
181 CSQKDALGLP SIATYRAAFE AAGVPVVKEV EYDPEMTDVA TIVQPMLDAQ PDVLCWCTSY
241 TPMVHAMTEY AHAKGFSGQI LSCTLDNYQR LVARTSAEFM EGALFQFPDF DDPKLARKAF
301 FFNRPSTFFK EYNARYPGNW SAVSWEYVAI LDIWHAAVEK VASVHPVSVL ATMKQMDPVT
361 HAFGPARWWG ESIFGIDHAL VGDWPVVRIQ EGKARIVEFG SIPAWLDKHE DMLRRHMQAA
421 GQMWQQRLET GEAQTGLTTR DLVD
SEQDB ID: 3101377CCC
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNQTLKAEMP IGQSIGETVR IVADTLFARI SSGEYPPDSR LPSERALAAE LGVSRNTVRE
61 ALDVLESRDM IRRRQGSGSF VTYQLDSKDT PAPGSVGERT SPLDHLIVRS IIEPEMIRLA
121 VMNMTPKELD ELAQTVARIE SVRADQAEFT RCEEDFYRRI ARSTRNPLLE SCYELTIEVC
181 RQSFRTALMR KHLTPDRIQN YQTRFNSLFN AIATRDVEAA VEITKLHLVE EQKLFLHEG
SEQDB ID: 3101377CCD
Reference:
3101377
Name: ammonium transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIIRRPEQGR ARCCHPKSDR NHLNLRKIGS FWLFGRQANK RNKIRRGKNI SLGLKRCLKS
61 ANFGPSSPHR LSDRQSGLNW PTRRWHWSPD WSPETPATPG KARPEPTENQ EGNKMSLDIS
121 AIHAEQVTLN SLVQNLLYAS GTVGAILVVV GLLLIDAGTA RRKNLFNSTI EKTLGFFLGF
181 ATYYVIGFGI WASQYYIMVD ATMTDSIKDW WLGGGMTNSL AHHVDPALFP GLNTFQIFVF
241 FLAVFAGIIN ILLHFSVSER MKASAYYITC VVAAVVSSVL SWATWGSVGP LTNAGFHDFF
301 GVGFVYLFPA GMALVFTPKL GARPGMMEPH ARVSAYLAPS IGLCAPGLLL IFGGLPMVIM
361 SCLFFFDPEA LAVSVTMADT SVGIALNNYA LVWAGGAVTG LILAYRSGNY AYTLLGPLAG
421 YVAGASGFDV YLPWQAFLIG LAAPFIAYAV YEFTLKRGID EHKLFPLFLG CGTFGMIVLG
481 VFKAGTPRGG YLGFEEGAYA FQHGQISLGM QLVGIAVCIG AGVVTALILS VILEKTVGLR
541 VDEHDQIDGL DKKIWDLEPD VHTHADSVPR A
SEQDB ID: 3101377CCE
Reference:
3101377
Name: formate dehydrogenase, Subunit: beta, Class: EC1.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLDDAGVWK SGRGRGRRLP KGRVYSDEAL AAVRGVLGDR PRRRDLLIEF LHLIQDACGH
61 LSADHLAALA FEMKLGQAEV YETATFYAHF DVVKEGETPP PALTIRVCDS LSCELAGAEQ
121 LRAALEEGLD PGQVRVLRAP CMGRCDTAPV LELGHNHIDH ATPEKVRAAI AAGDTHAHLP
181 AYETFDAYAA AGGYAVLKGL RAGGDWEAVQ DSVLAAGLRG LGGAGFPSGR KWGFVRANPG
241 PRYLAVNGDE GEPGTFKDRY YLERVPHLFL EGMLIAAWAV EAETCYIYMR DEYPAVLEIL
301 RREIAALEAA GIVAKGYIDL RRGAGAYICG EESAMIESIE GKRGLPRHRP PFVAQVGLFG
361 RPTLVHNIET LHWVARVCRE GPEVLNSVEK NGRKGLRSYS VSGRVARPGV HLLPAGSTIR
421 DVIAAAGGMA AGHVFKAYQP GGPSSGLLPA SMDDIPLDFD TLQPHGSFIG SAAVVVLSQQ
481 DSARDAALNM LRFFEDESCG QCTPCRAGCE KAVKLMQAEH WDQPLLEELC QVMADASICG
541 LGQAAPNPIR LTMKHFAEEI
SEQDB ID: 3101377CCF
Reference:
3101377
Name: formate dehydrogenase, Subunit: alpha, Class: EC1.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADGAHVEMV SFTLNGEEVT VPEGLTIWEA AHGRGLVIPH LCHKPDPGYR PDGNCRACMV
61 EVAGERTLVA SCIRPVAAGM VVTTDSARAE GARKMVVELL LADQPEVAHD ASSHFHAMAG
121 LNGVSESRFP ARDAAHVPLL DASHVAMRVN LDACINCNLC VRACREVQVN DVIGMAGRGA
181 GAQVVFDQND PMGASTCVAC GECVQACPTG ALMPATVLDA EQAGDSKDYD REVTSVCPFC
241 GVGCQLSFKV KDNKIKYVTG VDGPANESRL CVKGRFGFDY IDHPHRLTKP LIRRADAPKG
301 LNVDPGNPLS HFREASWEEA LDFAARGLAD LRAQKGSYVA GFGSAKCSNE EAYLFQKLIR
361 QGFGHNNVDH CTRLCHASSV SALLENVGSG AVTATFNEIE NADVAIVIGC NPIENHPVAA
421 TYFKQFTKRG GKLIVCDPRG VGMGRFATHR LQFKPGADVS MLNAMMHVIV EEGLYDQAYI
481 DQFTENWEEM KAHLADYSPE KMEPICGIAA GELRDAARTF AAGKAGMIFW GMGVSQHIHG
541 TDNSRCLISL ALMTGNVGKP GAGLHPLRGQ NNVQGASDAG LIPMFLPDYQ SVTDDGVRSA
601 FTSVWNSGDF SNQKGLTVVE IMHAIHDGDI RGMYILGENP AMSDPDVDHA RAALAMLEHL
661 VVQDIFLTET ANYADVILPA SAWAEKTGTV TNTNRQVQMG RPAVAPPGQA KEDWWIEVEL
721 ARRLGLDWNY SHPSEVFAEM KRNMKSLDNI TWARLEGEAV TYPSLSPEDP GQAIVFGDGF
781 PRANKRARFT PAKIVEPDER PDADYPFVLI TGRQLEHWHT GSMTRRASVL DAVEPEANCS
841 MHPATLRAMG IEPGDMIRLT TRRGSVQVMV RADRAIAQDN VFLPFAYVEA AANILTNAAL
901 DPYGKIPEFK YAAVKVERTD TAASAV
SEQDB ID: 3101377CCG
Reference:
3101377
Name: formate-tetrahydrofolate ligase, Class: EC6.3.4.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fhs-1
Sequence:
1 MAYKSDIEIA REARKLPILE IGAKLGIAAD ELLPYGHDKA KVSQGFIDSV QDRADGRLIL
61 VTAINPTPAG EGKTTTTVGL GDGLNRIGKN AMICIREASL GPNFGMKGGA AGGGYAQIVP
121 MEEMNLHFTG DFHAITSAHS LLSAMIDNHI YWGNEADIDT RRVVWRRVVD MNDRALRQIT
181 CSLGGVSNGF PREAGFDITV ASEVMAILCL ARDLKDLEKR LGDIIVAYRR DKSPVYCRDI
241 KAEGAMTVLL KDAMQPNLVQ TLENNPAFVH GGPFANIAHG CNSVIATKTA LKVADYVVTE
301 AGFGADLGAE KFMNIKCRKA GIAPSAVVLV ATVRAMKMNG GVAKGDLGAE NVAAVNKGCA
361 NLGRHIENVK SFGVPVVVAI NHFVTDTDAE VQAVRDYCAN HGVEAVLSRH WELGSEGSEA
421 LARKVVELAE SGKANFAPIY PDDMSLFEKI ETIAKRIYRA DEVLADAKIR NQLKEWEEAG
481 YRNLPVCMAK TQYSFTTDPN RRGAPTGHSV PVREVRLSAG AGFIVVVCGE IMTMPGLPRK
541 PAAETIRLND AGQIEGLF
SEQDB ID: 3101377CCH
Reference:
3101377
Name: chorismate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTSIPPQDC TDMTSLRAQI DRLDRELISL LAARAGYIDR AVELKQGNGW PARIPERVEE
61 VVMNARAAAE GQGLDPGLIE DLWRQLVDWS IAREARVIRE V
SEQDB ID: 3101377CCJ
Reference:
3101377
Name: folD bifunctional protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAATVIDGKA FAARIRGQVA EHVAELKAGH GITPGLAVVL VGEDPASQVY VRSKGKQTVE
61 VGMNSYEHKL DADTSEADLL ALIDRLNGDP DVHGILVQLP LPGHLDEDLV INAIDPAKDV
121 DGFHISNVGL LGTGQKSMVP CTPLGCLMML RDHHGSLSGM DAVVIGRSNI VGKPMAQLLL
181 GDSCTVTIAH SRTKDLADVV RRADIVVAAV GRPEMVPGDW IKPGATVIDV GINRIERDGK
241 TRLVGDVHYD SCAQVAGAIT PVPGGVGPMT IACLLANTLT ACTRANKLTE PDGLTP
SEQDB ID: 3101377CCK
Reference:
3101377
Name: folD bifunctional protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: folD
Sequence:
1 MSTVADTRLL PGKPVRARIL SEVSAYVNQV GRIGKLVSIS IGNVPEVAVY VRNQARAASA
61 VGVPFDQQLW DRSISQEVCQ SLIREMNDDP DVLGIILQRP VPDHINVRAL QAAIHPLKDV
121 EGMNPASIGN IVYNDVAMAP CTAAAAIELI RETGLSMAGL EVVMVGHSEI VGKPVAMMLM
181 AEGATVTVCH HMTRSDAMHS RRADVVVVAV GKAHLIGPDM IKPGAVVIDI GINHVPGPDG
241 PVVVGDVQTD AVKDVAGWIT PVPGGVGLVT VAILLRNAIR AHQQQRAAGW IH
SEQDB ID: 3101377CCL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALGLGLIA ALCWGLHDIT IRYLSRTVPL MGALAVVLAT GLGFQATVLA ATEGARLPQG
61 PALWLSIGSG LAFLVASLGL YFAFERGPVR LVAPIIGAYP ILSLLFAFLA GAPIGADQVL
121 AVLVIVGAVG VVAGLSDDSG DPAPPKGPTI ALSMIAAIGF AATFKLGQMA ATLDGELNAT
181 LLARVTALVL LLALIVIRRQ TLRVGAAALL PLVVMGLLDG VALLAVISAG VLDHPQLAAV
241 ASSMFGLITI VLAWAFLRES MSRPQWVGCL AAFLAIGYLA W
SEQDB ID: 3101377CCM
Reference:
3101377
Name: Gly cleavage system, Subunit: T protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKQTGFHDR FARFTENFIE YNGFWLANCM STAGPIEEYH ACREKCVVLD LSALRKFEIT
61 GPDSEALCQY IFTRNMKTLP VGGVVYTAMC YPHGGMIDDG TVFRLGKDNF RWIGGSDYGG
121 EWIREKAAEL GLKVLVRSST DMQHNIAVQG PESRELLKKV IWTAPHQPKF EELGWFRFAP
181 ARIGDDQGVP VVVSRTGYTG ELGYEIFCHP KHAGAVFDAV WEAGQAHGIR PMGLEALDMV
241 RIEAGLIFAG YDFSDQTDPF EAGIGFTVPL KSKPDDFIGR EALIRRKEHP ARVLVGLDID
301 SNVDVGHGDC VHIGRAQIGE VTSSMRSPIL GKNIALARVD VAHHEVGTRV EIGKLDGHQK
361 RLPATIVPFA HYDPQKTRPR S
SEQDB ID: 3101377CCN
Reference:
3101377
Name: protozoan/cyanobacterial globin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSALTSIGG EDALRDLVET FYDRMETDPE AWPLHRLHFR GHGLNHTRQA QFEFLSGFLG
61 GRAYYRERFG HMNLREIHAH VPIREADAEL WLKTFDAALA ECGLRGEVVD KFRATLRRAA
121 LMLVNDVPDW REESDGKARA AAGCPADGAA
SEQDB ID: 3101377CCP
Reference:
3101377
Name: MOFRL domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPATDTTSLR TAAVRAFRAA VRRADPGLAL TDCLRRTGLP RPNGDGKTIV LALGKAAPAM
61 IRALHGQITG PRVMLCVTHR ENQEPVAGAE VFRAGHPVPD EIGHHAARRV REILAETTAR
121 DVVLALISGG GSALLPAPPD GVTLDHKQAL NRLLLQSGLD INAVNAVRQH VSVLKGGGLL
181 RHAAPAPVTA YILSDVIGDD LRAIASGPTV APIASRAEIR DLLERKGIAD ALPDSIRRHL
241 RQPESAHPLP KAGNHLIGGN RESLAAAAAA LTVFGEVQVI DEPLVGDVGE AAETVAAALA
301 RAAQEEGPQV LIWGGETTVR VRGSGIGGRN QELALRLAAL MEDTPLSRPW LFLSAGTDGR
361 DGPTEAAGAC VDAGTLPRIR AAGAAPETFL ARNDSNSALT LSGDLLVTGA TGTNVADVQI
421 LLLG
SEQDB ID: 3101377CCQ
Reference:
3101377
Name: citrate lyase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFHPIEQAP ARLNRSELAV PGSQPQMFEK AAQSDVDVIF LDLEDAVAPD EKEQARKNII
61 KALNDLDWGT KTMSVRINGL DTHYMYRDVV DVVEQAGERL DLIMIPKVGT AADVYAVDMM
121 VTQIEDAKGY KKRIGFEHII ETALGMQNVT EIAGASKRNE SLHFGVADYA ASTRARTTII
181 GGVNPDYSVL TDPLEDGSRA VHWGDMWHYA LARMVVAARA NGLRPIDGPF GDFQDPEGYR
241 AAAKRAAVLG CEGKWAIHPS QIALANEVMS PSEAEVTKAR RILEAMAEAE AAGKGAVSLD
301 GRLIDYASIR QAEVLVEKAR QIAGN
SEQDB ID: 3101377CCR
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRIEIMLGD GNPLVLSAMS EVFERDPRFS LVATTATAEG FLGMAMRVPI QVGVIDWNLP
61 ALGAEKLTEV LRAQERAPRV VIYGHDQDPG LPRRAMAVGA AAFVSRSAPI DKLVQTCLDV
121 AEGKMVFPFL DVRELRADPI STLSRKERLL LEALAEGLTN KQLAARLGIS TNTVKFHLSN
181 VFDKLSVKNR AQAIAFYYSA QAKG
SEQDB ID: 3101377CCT
Reference:
3101377
Name: aminotransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSADTLFPKL DIPATIAAGP GPGNTDARVL AAFSGAGLAD HMHGDVLRGM VECKLMLRRI
61 WGTDNIHTFG VAGTGWSGLD VMFSAVMPGD KVVVFTNGTF SGIDGLTVRM KAATAEELAA
121 NPLDPRPASV VIVDIPHGQS VTGEIVETAL AEHKPKWAAM AHWETGSGRI NDIAGFSAAC
181 ERHDVMGLVD AVSSLGVEDF RIDDFPGVHG WASCPQKGIC CLPLTYAPVS FTDRYIQTLR
241 ATGTRSFVHH PILEARHWGV IEGKDVDKGT YHRTHSAYAV AAFHEALRIT LQQGVANRAK
301 DYAYHEAALR RAVEALGCEV TSNMTSLVVL NLPGDLRGRE MELVQNCRAR NFGIWPTLSA
361 PVQVRIGILN LLSRAAVTDI VTRFAEAIRE LGGAGDEATA LAALDAHYDN AIAAE
SEQDB ID: 3101377CCU
Reference:
3101377
Name: malate-CoA ligase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIHEYQAKE ILANFGVDIP PGALAYSPEQ AAYRAREIGG DRWVVKAQVH AGGRGKAGGV
61 KVCSSDAEIQ ETCENLFGRK LVTHQTGPEG KGIYRVYVEG AVPIEREIYL GFVLDRSSQR
121 VMIVASAEGG MEIEEISAEK PDSIVRATVE PAVGLQDFQC RQIAFKLGID PALTARMVRT
181 LQGCYQAFSE YDATMVEINP LVITGDNRIL ALDAKMTFDD NALFRHPHIS ELRDKSQEDP
241 RESRAADRGL SYVGLDGNIG CIVNGAGLAM ATMDTIKLAG GEPANFLDIG GGATPERVAK
301 AFRLVMSDSN VQAVLVNIFA GINRCDWVAE GVVQALKEVQ VEVPVIVRLA GTNVEEGQKI
361 LAKSGLPIIR ARTLMEAAER AVGAWQNDLS ENTIVRAVQ
SEQDB ID: 3101377CCV
Reference:
3101377
Name: malate-CoA ligase, Subunit: alpha, Class: EC6.2.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIFIDRETP VIVQGITGKM ARFHTADMIA YGTNVVGGVV PGKGGQTVEG VPVFDTVEEA
61 VERTGAEASL VFVPPPFAAD SIMEAADAGI RYCVCITDGI PAQDMIRVKR YMYRYPRERR
121 MVLTGPNCAG TISPGKALLG IMPGHIYLPG PVGIIGRSGT LGYEAAAQLK EHGIGVSTSV
181 GIGGDPINGS SFKDILHRFE QDDETHVICM IGEIGGPQEA EAAAYIRDHV SKPVIAYVAG
241 LTAPKGRTMG HAGAIISAFG ESASEKVEIL TAAGVTVAPN PAVIGDTIAR VMREAA
SEQDB ID: 3101377CCW
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMPVIMNSK PRVLVTRRWP AAVEAQLAER FDTQFNRTDT PLTSAEFRSA LARFDAILPT
61 VTDKLGAEAL DVTAPQTRLL ANYGVGYSHI DSDAVRAHGI TVSNTPDVLS ECTADIAMTL
121 MLMVARRAGE GERELRAGQW TGWRPTHLVG SKVSGKVLGI VGFGRIGQAM AQRAHHGFGM
181 KILVQNRSAV PQDVLDRYGA TQVETLDAML PQCDFVSLHC PGGAANRHLI NSRRLDLMKP
241 DAFLINTARG EVVDEHALAQ ALMFDCIGGA ALDVFDGEPR IAPVLLDCDN LVMLPHLGSA
301 TRETREAMGM RVLDNLVDYF EGRDPRDKVL
SEQDB ID: 3101377CCX
Reference:
3101377
Name: phosphoenolpyruvate carboxylase, Class: EC4.1.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ppc
Sequence:
1 MPAAAETAPS ADATVYAAEV HARLRLAWLR VLRRRAPVVA RAIEGGAEFW DAAAYAEHLQ
61 AATIWFHLQQ IMDENLAIRE ARQAERSGAA RDVPGSFARA LADADPDARR EMRRLLAEAK
121 LSVGPTITAH PTEAKRVSVM EIHRRIYRHL VQFESRRWSP QEETRLEQRL EMEIDLLWLT
181 GELRMERPSL AAEIDWGLQF YRTSLIAAVP RLYERYRSAV EAEFGPGFPG TACLKFHSWI
241 GGDRDGNPNV TAQVTRLALE RSRDMMRGVY VTALDEIVQR LSLSDRLVPV PPAERAALER
301 IVTRRADDPA ACAQRNPNEL FRQAAAAIAQ SVEGSRYAHV ADFIADLETL DRGLQAIDAG
361 LLADLLVRPL IWQVNVFGFR AHTLDIRQNS EVVTRALHDL WQVTGEAPEP LSPAWSARLR
421 AELGKPDLPY VNRARLGPEA AELMALLELM REIRTGADPQ AIGPFILSMT RSADDLLAVY
481 LLARYAGFGA ERLPLKVVPL FETIEDLRAA PAILRDVLEV PVAARSLRDG SGQIEIMLGY
541 SDSNKDGGFL CSTWSLDRAQ RAITRALARS GLKPVFFHGR GGSVSRGGAP TERAIAAQPR
601 GTLNGTLRLT EQGEVVTAKY ANTGTAAAQL ELLASSVLRH SAQPAFEAVD PEAEDVMETL
661 SSLSQTRYQT LLQHPAFLDY FNQASPVNEL ALLRIGSRPA RRFGAQSLAD LRAIPWVFAW
721 SQNRHMISSW YGFGSAVEDF CTVRGERGRA QLRRLFERVP LFRLIVDEVE KSLVLARLDI
781 AEGYAALVSD RAGAEAIFAR IGAEHGCSRQ AIEMLTGQGN GVRFPNFLGR VARNDATLRA
841 AHAAQIGLLG ALRADPGQDR RIRLMQTMNC ISAGLGWTG
SEQDB ID: 3101377CCY
Reference:
3101377
Name: Ser hydroxymethyltransferase, Class: EC2.1.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glyA-1
Sequence:
1 MNASHQDTGF FTEALSERDP ELFGAITSEL GRQRDEIELI ASENIVSAAV MQAQGSVMTN
61 KYAEGYPGRR YYGGCQYVDI AENLAIERAK QLFGCGFANV QPNSGSQANQ GVFQALIKPG
121 DTILGMSLDA GGHLTHGAAP NQSGKWFNAV QYGVRQQDNL LDYDQVEALA KEHRPKLIIA
181 GGSAIPRQID FARMREIADM VGAYLHVDMA HFAGLVAAGE HPSPFPHAHV ATTTTHKTLR
241 GPRGGMILTN DEDIAKKVNS AIFPGIQGGP LMHVIAAKAV AFGEALRPEF KTYIQQVIAN
301 AQALSDQLIK GGLDTVTHGT DTHVVLVDLR PKGVKGNATE KALGRAHITC NKNGVPFDPE
361 KPTVTSGIRL GSPAGTTRGF AETEFRQIAD WIIEVVDGLA ANGEDANEAV EDKVKAQVAA
421 LCAKFPIYPN L
SEQDB ID: 3101377CD
Reference:
3101377
Name: hydrolase, Isotype: carbon-nitrogen family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTALLQLTS SDDPAANLDM VRGMVAEAAA QGARWVLTPE VTNCVSNSTT RQREVLQHEE
61 DDITLAGLRA QATELGIWLL IGSLGLKTHD ADGRFANRSF MIGPDGGIVA RYDKIHMFDV
121 QVTETETFRE SANYRPGDRA VLAPTEFGTV GMTICYDLRF PHLHAALAQA GATVLTVPAA
181 FSPVTGAAHW ESLLRARAIE TGCWVLAPAQ TGTHPNSRGK PRRTHGHSLV VAPWGEVRID
241 AGSEPGIHIF DLDDTSVTEA RRRVPSLTHK RAFDGP
SEQDB ID: 3101377CDA
Reference:
3101377
Name: Gln synthetase, Isotype: III, Class: EC6.3.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnT
Sequence:
1 MTIDLAKFAK DKGVKYFMIS FTDLFGGQRA KLVPAQAIAD MQEDGAGFAG FATWLDMTPA
61 HPDMLAVPDP SSVIQLPWKP EVAWVAGNCV MEGADVAQAP RNVLRRLIAE AAAEGMHVKT
121 GIEAEFFLLT PEGDQISDPF DTAAKPCYDQ QAVMRRYDVV REICDYMLEL GWGPYQNDHE
181 DANGQFEMNW EFDDALSTAD KHSFFKFMTK SVAEKHGFRA TFMPKPIEGL TGNGCHAHIS
241 VWDAPGAASK VNVFAGAGDG PTGEVGLSER GKHFLGGIMK HASALAAITN PTVNSYKRIN
301 APRTMSGATW APNTVTWTGN NRTHMVRVPG PGRFELRLPD GAVNPYLLQA VIIAAGLSGI
361 HSKADPGKRW DIDMYAEGHK VRGAPKLPLN MLDAIREFDR DKELKKSMGD EFSASYIKMK
421 MQEWNSFVTH FSRWEKENTL DI
SEQDB ID: 3101377CDB
Reference:
3101377
Name: Glu synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVKDNKENA PPRTVPIQSA TFSNPINAEI RRAAATGIYD IRGGGAKRRV PHFDDLLFLG
61 ASISRYPLEG YRERCDTRVT LGTRFAKKPI ELDIPITIAG MSFGALSGPA KEALGRGASE
121 AGTSTTTGDG GMTPEERGHS TKLVYQYLPS RYGMNPDDLR KADAIEVVVG QGAKPGGGGM
181 LLGQKISDRV AEMRNLPKGI DQRSACRHPD WTGPDDLEIK ILELREITAW EKPIYVKVGG
241 TRPYYDTALA VKAGADVVVL DGMQGGTAAT QDVFIEHVGL PTLACIRPAV QALQDLGVHR
301 EVQLIVSGGI RTGADVAKAM ALGADAVAIG TAALIALGDN DPKWEAEYQK LGTTTGAYDD
361 WHEGLDPAGI TTQDPVLQAR LDPVDAGRRL RNYLNVMTLE AQTIARACGH NNLHNLEPED
421 LCALTMEAAA MARVPLAGTE WWPGKTGAGF
SEQDB ID: 3101377CDC
Reference:
3101377
Name: FwdC/FmdC family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTYDLAADG LRGLNATLQA QSDETNQTEW TIVNPRGSHA IAVGLDAPIE VKVMGSTGYY
61 CAGMNKQATV HVHGSAGPGV AENMMSGTVV IDGDASQYAG ATGHGGTLVI KGNASSRCGI
121 SMKGIDIVVH GNVGHMSAFM AQSGNLVVCG DAGDALGDSI YEARLFVRGS VKSLGADCIE
181 KEMRPEHIEL LRDLLARGGC DAKPEEFKRY GSARQLYNFK VDNAY
SEQDB ID: 3101377CDD
Reference:
3101377
Name: Gln amidotransferase, Isotype: class II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCGIVGLFLK DKSLESQLGV LLTDMLITMT DRGPDSAGIA IYGEPSPTVS KVTVQSENPD
61 RDFADLAEKV QPMVGGPVSL SRRDTHAVLS VPHGTAEALR RQLREVAPDV RVMSFGDSLE
121 IYKEVGLPRD VAARFDIASM TGTHGIGHTR MATESAVTTL GAHPFNTGSD QCLVHNGSLS
181 NHNSLRRKLR REGIHIETLN DTEVAAAYLT WKMQTGATLG EALEKSLEDL DGFFNFVVGT
241 RDGFGVVRDP IACKPAVMAE TDQYVAFGSE YRALVNLPGI EQARVWEPEP ATVYFWTHGD
301 TATPTGKAA
SEQDB ID: 3101377CDE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTIGYESWA VDLAEVGAIY PFQGWEVAMT VIGVLFWIGW HRIQFVRENA HLENAKKRAL
61 DHERIQKSVE RY
SEQDB ID: 3101377CDF
Reference:
3101377
Name: ammonium transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGNLNALTT VFTEFYYWVT VVFMFLIHVG FCMYEVGASR RRNHMHTLMK NVMVIPLVTV
61 TFFFFGWWIY WAFPMFPFFG GLNTEAGAAN LPWAETMGPN AADRITGVFW AAFLLFSWTA
121 ASIVSGAVIE RIRSSALWVH AVLIGSVWWI IDAAWGWHYG GWMVQYLGYH DAYASGVIHA
181 IAGGYALGVI MVLGPRIGKF APDGTPRDIP PHNPWMLTIG IFLIYTGFWG FYAACNVPAI
241 SPEAIGGQIT GTTWTATNIY LAPTSLSGIT FNFLMSLSGG LMAAYVVSKG DAFWTFSGGL
301 AGVITASAGN DLYHPIQAMI IAAIGVVIVY RLHYWVERRF KLDDAVGAVA VHGYAGFIGL
361 IIAGFVLWGA PSSPYEGYAT INPVGQFIGA LIMFFGLGFL PAFVVAKMQA AAGVLRIPEE
421 VELEGLDYAE HHAYEDAKEA IIEADKAYLA SKVSPAE
SEQDB ID: 3101377CDG
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAIIYRTSAL AQRHAEIGGE LEDWNGMGTA WFYDHTDERA KADYEAVRTK AGLMDVSGLK
61 KIHLSGPHAA AVIDRATTRN VDKLMPGRAV YACMLDDRGL FIDDCVIYRL SVNNWMLVHG
121 TGTGHESLAM AAYGKNVSMI FDDDLHDMSL QGPVAVDFLA KHVPGIRDLA YFGIIQTKLF
181 GKPVMISRTG YTGERGYEIF CEGRHAIALW DAILEDGKDM GIVPVQFSTL DLLRTESYLL
241 FYPGDNSETY PFADDTCGDS LWELGLEFTV SPGKIGFRGA ENHYARKGKE RFKIYGVKLE
301 GTTPADMGAP LLKDGEVVGV VTFGMNSDLN GHNVGIARMP VDCAVPGTKL TVRNEDGTEI
361 ACVAEEMPFY DKDKSIRAAK G
SEQDB ID: 3101377CDH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSDQQGDSD GMSKFQFPPS IASRPVYGTL EPRPGKAHLM IADAEGAEAL LDLAARDAAL
61 FATAHIIFIP KGTGETYVER LRALGPAQFY VGPSYAASVQ RIRRVLSDAH MGLQVYLAGT
121 EGLMGQAQNE AMQAGIPHGA IQTEHRGSVA RRMQCVHCKG ITEDVTTDPF VCSHCGLNLF
181 VRDHYSRRLA AFQGVCIDAE DPGNVPEPVE LYK
SEQDB ID: 3101377CDJ
Reference:
3101377
Name: oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: NAD-binding domain/2Fe-2S cluster binding domain
Sequence:
1 MSAAPQKAKA GAEKIEVTVS AVVPLNPLVT RFEFTRRDGQ PFPPFSAGAH TVVEMRDGER
61 TRLNPYSLMS DPGDNSIYAI SVRRDDQGRG GSLFLHNKVK VGDPMTITFP VNLFPLDLRG
121 RKHVFLAGGI GITPFLAMIA HLERMGGAWE LHYSCRSREL GTYVDELTYK HPNKVHVYFD
181 DQDQAIGLED LLDGQPLGTH VYVCGPKGMI DWVHATAAAH GWPDENVHSE EFLAPQPGKP
241 FEVRLCKSDI TIQVGEHESL LEAMERCGVD APFLCRGGAC GQCETDVVDS DGDFVHRDHW
301 LDDDEHASGK KIMPCVSRFV GKTLVLDR
SEQDB ID: 3101377CDK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIQFNTETF RDDYSFRNSD WAIKRFPFPF HEDSYMYSVN MEQHRGGPAG SVYEKRFDVD
61 EHYVSEMADR AIVLADDPLR CQSLPHMTLA GWDTLELIMV CKSEDYPDLF ELHRDGDRWR
121 WINKPMGIDH TFTFLDETTL PCGPLEYITR QAQGDYAVLD QRGDMLYMDA GMVTTQADWS
181 LDFDIGMDFF EWHAPVPLAH EMGIFKRALK FLLNVQQGAP ARRLNWTMTV NPLLDTSPEN
241 YHKWGVQKTT LTPENIGAKQ HLRVELQTFY RLPRSNALLF PIRCYLIAFQ DLVSVPKWGR
301 RLHRVVRDLP EELATYKGFI ANRPMMLDYL SRYDDGLPTS PGIWPDLDSE PPLQT
SEQDB ID: 3101377CDL
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDAAKDLRMT QLLQDPHSVR EEREKVLEVA IGREVRAFRK QQGITVAELS KLTDLSIGML
61 SKIENGNTSP SLTTLQTLAN ALSVPLTAFF KGYEEKREAI HTKAGQGLEI ERAGTRAGHQ
121 YSLLGHIGSN SSGVIVEPYL ITLSTESDTF KTFQHDGIEM IYMLEGKVDY LHGSEIYPLE
181 PGDTLFFDAD APHGPERLVE LPTRYLSVIC YPQQKKG
SEQDB ID: 3101377CDM
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTRIGFLLF PGFPMACLTS IIEPLRAANE ISMSDSFAWR LVSELPRKVV SSAGITFEPD
61 ASLETVSALD YLVLLSAPVA RFENPRTASL LRRIERHGTV LGAISGGVFP LVRSGVVRDE
121 RLSVHWCYEA AFAAEFPEIQ RSNEVIEISP RLLTASGAAA AFDLALSLIE AALGANVANE
181 VACWFQHPIM RKAGVKQALP IHQAADAEGE MSPLVARAIE IFAENLTTPA SIAAIAERLH
241 ITPRHLERCF KQATGQNPTG YFRHLRMQAA RQIVMYTNDS IAEVATAVGY ANAKPLVRHY
301 RDTFGLTPQQ DRKRINLYRV EGNLPVPSV
SEQDB ID: 3101377CDN
Reference:
3101377
Name: Sar oxidase, Subunit: gamma
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHDLNPITPL GAADPVVEGH GPVTLREVTE TALASVAARL GREAETTTLL TEVLGAAPPA
61 PARLCPGTPG AFWMGPDQWM IEAPLSTHED LAAQLAARAN GAASVTEQTD AWCRFDLTGE
121 RLADVFERLC PANTRAFAGG EAVRSAIDHL GCFLLCRAPD HITVLGPRSA AGSLHHALVV
181 AMRAAF
SEQDB ID: 3101377CDP
Reference:
3101377
Name: Sar oxidase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGPNRLNGG LIDRSKPLNF TFDGRRYQGF AGDTLASALL ANDVRLMGRS FKYHRPRGPM
61 SAGSEEPNAI VELREGARKE PNTRATTAEL FDGLSANSQN RWPSLKWDVM AVNDRLSNFF
121 AAGFYYKTFM WPAAFWEKVY EPIIRKAAGL GTLSHAPDPD SYDKGFLHCD LLVIGAGPAG
181 LAAALTAAQS GAQVILADED FLPGGRLNAE TFALGDQSGA AWAAETAAAL QAMPNVRLMT
241 RSTVIGAFDH GIYGVVERVS DHLPQPLPGK PRQILWRVYS RRAILAAGAT ERPIVFENND
301 RPGIMLASAL RSYANRWAAT PARAVAVFTN NDDGHRTAQD LSAQGVSAVV IDTRADAPET
361 TGYETIPGAT VTNTQGRLGL TTVEVTLATG TTRTLSVGGL GVSGGWNPNV HLTCHQRGRP
421 VWDQAIAAFV PGGTLPVGLT PAGAAQGVFS THGALASGQA AAQQALSDLG ITAKSAALPQ
481 AEDAPVNVTP FWHVKGAKRA WVDQQNDVTA KDVKLAHQEN FVSVEHLKRY TTLGMATDQG
541 KTSNMAGLAI MAEVAGKSIP EVGTTMFRPP YTPTAMGAFA GRSRDKDFRP TRKTPSHVWA
601 EEQGAVFVEV GMWLRAQWFP RPGETHWRQS VDREVTQTRK SVGICDVTTL GKIDVQGADA
661 AEFLNKVYCN AFAKLAVGRT RYGLMLREDG IAMDDGTAAR LAEDHFVVTT TTANAVPVYR
721 HMEFVRQCLF PDMDVQLIST TEAWAQFAVA GPNARKLLQK IVDPAHDLSN EGFPFMACAE
781 ITVCGGLRAR LFRISFSGEL AYEIAVPTRY GDALIRRMMQ AGAEFDVVAY GTEALGVMRI
841 EKGHAAGNEL NGTTTALNLG MGRMVSKKKD AIGSTLSERE GLNEADALKL VGFRPVNPQD
901 KVPAGSHLMT RGDPVDAAHD QGYVTSACYS PSLGCHIGIG FLKSGDSRKG EIVRLVSPLT
961 GLDHEVEVVS AHFVDPEGER LRA
SEQDB ID: 3101377CDQ
Reference:
3101377
Name: Sar oxidase, Subunit: delta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLIDHPILGP RDSSEFVYKG DAALIRRPDW QAPDALEQFI DYGYLRDNPA GVHRELWFHE
61 QGDRSWLVVT RDTTTHEIRS VELARDVARK EGRSR
SEQDB ID: 3101377CDR
Reference:
3101377
Name: Sar oxidase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYSGLRVIK EALTGHRGWG PAWRDAAPKA QYDYVIIGGG GHGLATAYYL AKEFRQARIA
61 VLEKGWIGGG NVGRNTTIIR SNYLLDGNEP FYEFSLKLWE GLEQELNYNA MVSQRGILNL
121 IHSDAQRDAF IRRGNAMMLN GADADLLSTE QIKARYPFLN VDNARFPIKG GLAQHRGGTV
181 RHDAVAWGYA RAADRHGVDI IQNCEVTGFR IEHGTCTGVE TSRGVIGAGK VAACVAGSSS
241 RLMEKAGMRL PIESHVLQAF VSEGLKPLLP GVITFGAGHF YCSQSDKGGL VFGGDIDGYN
301 SYAQRGNLPV IEDVCEGGMA IFPMLGRARL LRSWGGIMDM SMDGSPIIDR THIGGLYFNG
361 GWCYGGFKAT PASGFAYAHL LATDSPHKTA TAYRFDRFAR GRMIDEKGMG NQPNLH
SEQDB ID: 3101377CDT
Reference:
3101377
Name: carboxymuconolactone decarboxylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTFDEDLFL KGLEQRKATL GAEYVERNLA AADEFTRPFQ EAMTAWCWGF GWGDDVIEPK
61 TRSMMNLAMI GALGKMHEWE IHCRGARTNG VSRDEIRAII HVIGIYCGVP QALECFRVAR
121 RVLDSED
SEQDB ID: 3101377CDU
Reference:
3101377
Name: Rieske 2Fe-2S domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEPVRSLAA RYYTDPAIFA AEQAGLFART WQFACHASQL ENPGDYLAFD LGDESLFCIK
61 GRDGVIRTFY NVCQHRAHQL VSGAGSTRVV VCPYHAWTYE LTGHLRAAPN AKSVPGFDAA
121 QICLSEIRTE VFLGFVFVNL DPEAQPMDHW FPNVRAELEA FVPNWSDLKP LEWVEIPEDC
181 NWKVSVENYS ECYHCSLNHP TFSTGVIRPE TYDIQPQGYC LRHTTECNDL GQMSYDIDSG
241 FPNNDRYSSW FLWPMFSFQV YPGNLLNTYH WRAVDAGRVV VWRGWYSVGG AENETVRRMA
301 VQDRATTVEE DIRLVESVQR GLRSRGYVPG PLVVDPGCGV NSEHSILHLQ KWMREAVAAE
361 PMS
SEQDB ID: 3101377CDV
Reference:
3101377
Name: SIS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNDTNVSSRV LRQLTEEWDT LTPEAQKAAR YVLENPQDVG VSTVREIAEA ANVKPNTFVR
61 MARQVGFDGY EDFRAPFREA IRQGGVSFPE RARWLQEIRK SGDLGGLYAD MAEAAMRNVE
121 ETFAGIGAER LKTAAEAIWA SRQVFTLGVG VNNANARNFT YLASTGMTDF HAIPRPGSTA
181 VDDLAWADQR DVLIAMTCRP YRAEVVEAVR LARDQELTVI ALSDSPASPI IRAAQHGFVV
241 AVDTPQFFPS SVSTIALLET LLSFVIAVAS DEIVTRVETF HQRRHQLGLY TEEPE
SEQDB ID: 3101377CDW
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRNDLPAHA RVVIVGGGVM GVGLAYHLAH EGWGGDTVLL EKAELTSGST WHAAGQITHS
61 TSSFGLGKCV DYNIGLYSGK LEAETGQAVT WHGCGSFRLA YTEDEMDWLR HTLSVGRSLG
121 FNIELVGPKR IAELHPFYNL DGVLGALHTP DDGHVDPTNV TMAMAAGARA KGVRIFRHTC
181 ATNITQGANG EWVVETGKGT ITCEHVVNAG GTYARQMGEW SGLQLPMTSM THHYFVTEPV
241 PEFQSLDREL PVIRDDRKVS GYIRMEQKRG LIGIYEKANP NAVWIDECPW DYENWLFDAD
301 YDRVMPWLEE SLNRMPIFAD LGIQREVHGA ISHPPDGNPL IGPAPGVRNY WCCCGTQIGI
361 GWGPGLSREL ARWIVHGAAD ISMRDFDPRR FGAYATKDWQ VIKAREDYCL RHEIPFPHFN
421 RLAGRPVKPS PLYDRLKEKG AVYEEVYGHE RPRWFARGIE QRDHYGFGRT PVHDMVATEC
481 AAVRSAAGIM DISAFTKVEV SGPDAGALLD RLTANRLPQK PGGIALTHML NRRGRIELET
541 TVVKLDEDRF YLVCAAFFEQ RLLDHLAAHR GTADITVRNL STDWAALALN GPHARDILAA
601 CTEADLSNAR FKWLTAQQIT VAGHSLWALR MSYAGELGWE LHIPRDHALA VYDALWAAGQ
661 RYGLTDYGSF AMNALRMEKA FKGAGELTNE VTLAEADVLR FARTDKDYLG RDKTLNAGNL
721 PWVCAYLEIA PDGRFDGNGG EAVLLDGKVV GSTASVAYGH TVGKILAFAY VKPQVNVPGT
781 EVEVIIAGNP RKGRILGAPA YDPDSTKPRA DAATEPAQ
SEQDB ID: 3101377CDX
Reference:
3101377
Name: Zn alcohol dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAMVTMGHG ELDRIVLHEA WPVPRPAPGE VLIRVGACGL NNTDVNTRTG WYSKAVQEAT
61 TGSAYDRVDA QDPTWGGAPI TFPRIQGADV CGRIVAVGEG GDASRIGERI ITDNWLRDPS
121 DPQNKDTAGY FGSERDGGFA EYCTIPAVNA LAIDSPLSDA ELATFSCSYS TAEGMLTRAQ
181 VTGADTVLVP GASGGVGGAV VQLARRRGAR VIALASEAKH AEVAALGADR VLPRAPEDLR
241 AALGAEKITV VADVVGGPYW PMLIDILERG GRYTCSGAIA GPMVTLDLRT FYLRDLTFTG
301 STVIDPQAMP NLIRYIEAGE IRPALAATYP LDQLRDAQAA FIAKRHTGNI VVTP
SEQDB ID: 3101377CDY
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKITRITVYQ VDLPLEHPYW LSGGRLKFEL LDATLVKLET DAGITGWGEG TPWGHTYVPA
61 HGPGIRAGIE TMAPFVLGLD PRRLLDVERA MDIALPGHLY AKSPIDMACW DIAGQAAGLP
121 IADLMGGGSR TPRPIASSVG AKSVEETRAV IDRYRQRGYV AHSVKIGGDV ERDIARIRDV
181 EDIRKPGEIV LYDVNRGWTR QQALRVMRAT EDLHVMFEQP GETLDDIAAI RPLHSAPVSV
241 DECLVTLQDA ARVARDGLAE VFGIKLNRVG GLTRAARMRD IALAHGIDMF VMATGGSVLA
301 DAEALHLAAT IPDHACHAVW ACQDMLTVDI AGGRGPRNID GHLHLPETPG LGVHPDEDAL
361 GDPVAVYS
SEQDB ID: 3101377CE
Reference:
3101377
Name: glutaredoxin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPVEIYTSP LCGYCHAAKR LLDQKGIAFT EIDVLTNPKR KPEMIQRAGG RRTVPQIFID
61 GQHVGGCDDL YALEQDGKLD PMLASR
SEQDB ID: 3101377CEA
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIARLNLWH VPLTSHTAYY MADGKTCDTV ETVVIAVQTD TGITGWGEVC PIPHYLPAYA
61 RGVAPALTEL APVILGADPV GVGALMERVD AVLHGHPYAK SALDIALWDI TGQVAGLPLH
121 ALLGGWRAAD MPLYHSITCI APDDMARIAR EAQAQGITQF QVKLGASGDW QTDVERLAKV
181 REAVGPGPLV YGDWNCGATS LEAIRVGRAV AQLDIMLEQP CATLEDCARV QRATGLPMKI
241 DELAHDTASL LTAHRLGIMD AVALKLSKFG GLSTTRRARD LCLHLGARMC IEDTWGSDIT
301 TAALLHLGAA SEPGRVLNVC DLSGYVAPRL APDAPVRANG RIAPPEGAGL GITVDRGALG
361 VPDLILD
SEQDB ID: 3101377CEB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTDPAFQN LLAEFQALHA REPALAGFVA LPDSLTPQPV TPVRIPPAAL MESDPDLTTT
61 AYAAIRDAFI AAGAVAQWRL TYQGSRLGAD FMDRFACYCL IGEGGPFASD SLAAYVVYMP
121 AGLYYPFHQH PAEEIYFILA GEAEFLMEGH PPRRLGPGDH VFHPSGHPHA TRTYDRPFMA
181 LVLWRGDLET APVLTYPEGE I
SEQDB ID: 3101377CEC
Reference:
3101377
Name: Glu 1-semialdehyde 2,1-aminomutase, Class: EC5.4.3.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemL
Sequence:
1 MIRLNSQADW VERARAVLPA AGFGNFDPAV VIARGQGARV WDQDGREYVD YLIGSGPMLL
61 GHGDPEVMEA VLEQLPLGTT FFANNTKGIE LAEAIVQAVP CCEQVRFVTS GGEADMYAIR
121 LARAFTGKPR IVKFEGGYHG MSAEAQMSLA PARAVNFPTP VPDSAGIPPG VADQVLVAPF
181 NDLEAVASLL AEHDDIAAII AEPLQRIIAP APGFLQGLRA LCDRHGVLLI FDEIVTGFRL
241 SYGGAQEHYG VTPDIVTLGK VIGGGFPLAA LGASARIMAH FDKGAVGGEG WLMQLGTLSG
301 NPVAAAAGLK TLEILRRPGQ YARLRDLGER LMAMHERALG AQGIAHRLSG DATLFDVYFT
361 DAACTDYRTA RHAAPELAQV WNAVLRAEGV LKSPGKLYPS LALGEEELER TEAALNRAAA
421 AVTG
SEQDB ID: 3101377CED
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETNLQDWV GRQESAEDWL RPQPARFLQA TLDRDPDLAE GDALPPLWHW LYFLEARRAS
61 ELGRDAHPKK GGFLPPVPLP RRMWAGGRFR FARPLILGRA ASKRSTIASV TEKEGRSGKL
121 CFVTVRHQLL QDGAPALTEE HDIVYRADPT PDAPAPTPER APDGAEFSRR ITPTEVMLFR
181 YSALTFNGHR IHYDVDYART VEGYDGLVFH GPLTATLLAD LACAQAGRPL RAFSFRGLAP
241 IAGPAPFDIE GRAEGDALTL WARRADGALA MRASAEF
SEQDB ID: 3101377CEE
Reference:
3101377
Name: MmgE/PrpD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTASHLARF AVTARPDPAV EAVAAPAILD CIACILAGAD SPAATRSRAA LAPLGSGPVP
61 ALGTALTLPA PTAALVNAVA GHAWDMDDWE EPGNTHPTVV LFPALLAAAH LRPVSGAELL
121 AAYAVGIEVI MRLGEAITLE HYKRGFHATA TLGAIGAAAA VARLLALSED QAEHALALSV
181 SQALGYTAQF GSTAKPLQAG FAARTGVEAA LLARAGATAQ PHVLDDQRGF AGLLAPHDPA
241 RLAAIPERLG APWGLLQYGL AFKPWPSCGY THRLMTAAAE IRIRLGGETA GITAIRACLP
301 DFHHAILPFH QPGNQAEALF SAPASIARML ASGGLTLADG AAEFWTEPEI RRLIALTELR
361 AEPVRDRSLN FDPDQPDRLS VTLADGLELS ASCAYPLGAP QNPMPPDQLA AKWHEITGRP
421 ISQYHAMLRW PQAPDIAAFL RQLAG
SEQDB ID: 3101377CEF
Reference:
3101377
Name: fumarylacetoacetate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLASFLVEG APSYGVITDA GAHPALPAQR ATCPTLRDYL RTRPVAGLPG QCGAALPLDS
61 LVWLPPIPAP GKILCAGMNY RKPYPVAGVA PPDPGHVVLF SRHPQTLVGH GAMLEMPQGA
121 AAESFDFEGE IVAVIGQPGR HIAPEAALGH VLGYSAMNEG SVRGWMKHSV HAGKNFHASG
181 SWGPWITTAD EAGDIAGMTL ETRVNGTPMQ SDSGAGMIFG LAELIAYISH IQPLEAGDII
241 ATGSPDGTGG SRTPPAFLRS GDRVAVTVGG VGTLKNTVGA S
SEQDB ID: 3101377CEG
Reference:
3101377
Name: 2-dehydropantoate 2-reductase, Class: EC1.1.1.169
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: panE-2
Sequence:
1 MKIAIVGCGA MGSIYAARLA EAGHQVLAVD MWAEHVAAIN AGGLRVDGPS GTLLSRQVEA
61 MEDLTWAGPC DLYILATKAA GVEPAARAIA ATLPAHALVL TIQNGLGAGE RIARHLPADR
121 VLLGVAEGFG AAMVGPGHAR HTAMKLIRLG VMTGGDDPRL EQVAGIWRSG GFEVETFADI
181 DRLIWEKLLC NVTLSAPCTA FGCTVADLRA DPERWAVALG CMAEAFAVGR AHGVAFSFDN
241 PVAYVTAFAE RVGAAKPSML QDHEAGRRSE LEAINGAIPP LGAALGIATP YNETLCAVIR
301 AREAAFGGER T
SEQDB ID: 3101377CEH
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRRKRKTTP ETSPIERPAT AAHGGSWHPV PAEAVTQLAE AAITILTTIG MAEAPPVVCD
61 AILAAGGRLD RGRLLYPRAL IEATLAEMPR RVLLAGQDPT HDMRVGGTRA FAGTGGAAPN
121 VMDAESGDYR PSRLADLFDA ARLADALDHV HFFARSLVAG DVADPLRFDL TTAAAALAGT
181 AKHVMVQATE PGHVAPLAAL CHRIAGGEAA FRARPFLSLN INHAVPPLRF HAESAEVMAE
241 AVRAGIPVHC NVFGQLGASS PVTLAGSVAQ TLAETLAGLA FVHALDPGAP RIAGPRPMIT
301 DLRSGGLAGG AGEQAMATGL AVQVLRHWDL PCSVIAGATD SKLPDFQSGY EKALTINTAL
361 QAGANLITQA AGSQAGLMAV HFGAMVADND MLGAILRANI APEITPETLA LEAIAEVVRG
421 EGHFLGRPET YARMRSDFLY PEIADRALLG DWALGARADM GARASTRAAT LLDRHWPNHL
481 PRDLRAELAD QFGLPIEQEP LA
SEQDB ID: 3101377CEJ
Reference:
3101377
Name: malate/L-lactate dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDPNSKLTL ASGRTRLPAA KVQTRLSAIF QALRFDPDIA EEVAAHLVDA SLSGVESHGV
61 MRVLEYAAQV ESGYLTPSGR PQVLRDDTGG PTRIEAGGGI GIPALRLAYD TCCDEARARG
121 LSALSIRHVG HTGRHGAFAE AAAEAGCLTI CLGGGNRQTW RQVAPHGGAR AMLPTNPWCI
181 GIPGGDRGPV VLDFATSKIA GGWIYAARSA GALLPEGCVI DAAGHPTRNP EDYFAGGAIL
241 PAGGHKGFGL ALLGELVGEA LLGPSTTECN WLLIALSAER FREAPAMAAA AEEVLDELRR
301 CPPAPGSSGV EIPGERERAH RAASGGIVSV PRDTWTQIER LADRLGVSAT
SEQDB ID: 3101377CEK
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMARPSLPLH QIQAFDAAAR HLSFTRAARE LNVLGPAVGR QVAQLEADLG VSLFLRTKPR
61 LTLTDEGAQL ARAVAAGFEA LHQGLAELRD RSGQAALVVN AAIGFTSYYL LPRMGAFQSR
121 HPEIALQIVT RDQNPDYDPA TCDLLVTFGT AGLEGMVSRR VIPERLVAVC TPAVLGGRGP
181 LGRAELAAER LLHLSAESHF DDWQRYFEGS GVTPPSPPRH DRFHSFMVHN RAVQNGMGIG
241 LSWRPFMDDQ LESGALVLAA THECRTTRGY YCNVTPRGAG KPGAETFMTW LCEADRAPSP
301 AADRSPRHP
SEQDB ID: 3101377CEL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPADIIIHNG SLITFDEARP QAQALAIQGG MIAAVGSDAE ILALAGPETR LIDAGGGTVL
61 PGFIDSHVHL FGGSVELDCL SLYGVKGLDA MRAAIQPYAQ ANPDDALVFC VMADYDILGT
121 GHTLTRHDLD SILADRPLAM FAPDHHTVWA NTAALEATGL LQGGEVDAGS LIVLGEDGLA
181 NGELLEPGAY GPILGLTRHG GREMLGLTTG KDPEPPATPD QRARDKDVIA RGLAHCAAQG
241 ITGLHLMDGN RYQLELLTEL EAEGRLLCRC EVPFHMKGTD PVERMTAEAP AMRAAYRGDK
301 VRCNHLKMFI DGVIESGTAL MLRPYPGELG ANDNTGDEVF TQEHFTACCV EADRLGFQIA
361 VHAIGDAGVR RTIDAFEAAR RANGTRDSRH RIEHIEVIHP DDIPRLAELD IVASLQPGHA
421 PRGHVFPPGA VGQYLHPDQI VGAYAWQTIR ETGARVVFST DWPVIPVDVM PSLRAAIAPL
481 DLGPDWPDQS QSLMDTLASY TRDNAWVEFN EDSKGRLKVG MAADIAVLSH DLTALAPDDI
541 TQAAAMVTIM DGAVTYQRPG
SEQDB ID: 3101377CEM
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potD
Sequence:
1 MKKTLTALTL VLAGPAFAEG ELNIFNWGNY TSPEMIAKFE AETGIKVTIT DYDSNDTALA
61 KIKAGGHGFD IVVPSGTYIP IFVGEGLLME SKPNQMENFK HMDPQWVDVE FDPGRNYTVP
121 WQWGTVGITV NTSVYGGDIN TAALIFDPPE ELKGKINVVP EMNDVMGLAI RYAGGEQCTA
181 DKEVLKKARD ILQAAKPHWL SMDYGNIEKY AKGDLAAGVN WNGASFRARN QNPDIAFGYP
241 QEGFPVWMDN AAILSDAKNV EEAKIFLNFI MDPENAAMLS AFARYANGIK GSEAFMPEDM
301 KTAPEVVVPD ALKGAAFVSK TCPPEATKLY TAIWTELQK
SEQDB ID: 3101377CEN
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAERVFDIRR QTGFTTIAIA CFAMLYMPII LLVIYSFNAG TSIAIWEGAS WRWYVSAWNN
61 EQVQEATLRS LIIAVWASGI STTVAVLAAL ATTRTRRFRG QTAVFALINQ PLMVPEIVTA
121 VALLIFFAMI KVATGYTGLA YLIIAHSAFC IPFAYLPIRA RLQGMDLSLE QAAADLYATP
181 FQVFRRVTLP QLWPGILAGA MLAFVISLDD VVITEFVKSA GQDTLPTYML GQLRRVVTPE
241 INAISTVLLS ISVTMVIAFT LLSKIRK
SEQDB ID: 3101377CEP
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potB
Sequence:
1 MESIPDTIAR RTARNRWLLL IPALAILLFA ASGPLLITLV YSVLTPGDYG GVEWQFSLDA
61 WFNVFMQRDI FDDTLGWSDA HLSIFWRSVK LSALTTLACL AFGFPTAYFI ATRPKKQRDL
121 WMLLIIIPFW TNLLIRTFAI LELIRNEGTV NTVLIALGLI DEPIQMLFTE FSILLGMVYV
181 YLPLMVLPIY ASMERFDFRL VEAGYDLYAT RFRVLRKVIL PLVKPGVIAG SILVFVPSLG
241 AYVTPRVMGG GNQLMIGNLI ELQFGQGRNW PLGAALSITL LAIVMVALLA YVRVAGNEET
301 PHG
SEQDB ID: 3101377CEQ
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: ATP-binding component
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potA
Sequence:
1 MVPPTGERSL TKAISARALR KVYPGTPPVE ALGGVDIDIA DNEFFTLLGP SGCGKTTILR
61 LIAGFEHPTS GSLDMFGQSL LDLPPYKRQI NTVFQSYALF PHMSVAENIG FGLEMLGKPK
121 SEIKSTVAEM MDLVQMSHLA DRQTSQISGG QQQRVALARA LAPKPRVLLL DEPLSALDFK
181 LRKNMQLELK RLQTETGITF IFVTHDQEEA LTMSDRIAVM SDGAIRQIGS PRDIYDHPAD
241 RFVADFIGDT NFLPADVIAT EGERVSLRLG SGKTITAPAR HAGGGRVTLA VRPEHARLEA
301 EDSGLLPGVL SDAVYFGTDT HFHIALDDGT AFVLRQQNSP DTETRFAKGE RVSVSFPGEV
361 AQVLRD
SEQDB ID: 3101377CER
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLTDRDILR LRRAMSSAGT PEFFASFRRL LRARMPFATF ILIRFDPGKA PVMLDAWFVS
61 KRLPSAALTE YLENTYPFDP FFQFRDLPAG GGLYRLPEIA PDRFFSSEYY LEYYRKTGLC
121 DEVGLLAPLP TGGRAHLSLS RFEETGPYRR REIQCLKHHA PLLLELLAQH VTAVSPQVAV
181 APPAAAPSIA DLIQVYAGDT LHVHLTRREA EIAALVLQGH SNGSAALSLN IARETCKVHR
241 RNLYRKLEIS SQRDLFGLLK HLL
SEQDB ID: 3101377CET
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWRIAMNSLP QRPADSWSPL YFLASLGAGG LAVTFFMFLM FWVPHPGRPV PVFEDILGAF
61 RNGGLPLKAA ILVAVIGIAV FAVVNIRLLV WNLAQLSAFR RTEAHARLMT SNGETQLLAM
121 PLALAMAVNA GFILGLVFVP GLWGVVEYLF PLALVAFALI GVIAFRRIGA FLSRVLSEGG
181 VFDVTANNSF AQLLPAFALA MVAVGMSAPA AMSTLPLTVG VSMILSVALG TFAGLYTLVA
241 AIVAFGSMLR HGTARESAPT LMIVVPILTV LGIMMMRQEH GLHTTFAAHG GIADTLLLTT
301 MILAVQSVFL MLGLLVLRRQ NYAATYLRGE ENSPGAYALV CPGVAFSVMV QFWINKGLVG
361 AGLIAKFGIA YWALSALAVA SQVAMIALMI LLHRRHFARR MPRDAVPAQ
SEQDB ID: 3101377CEU
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRRQFLKAA LAGGTAATMV SPPQAARAAP LRSSARIVII GAGAAGTALA NRLVRRLEGA
61 EITLIDPRRA HLYQPGLTLV ATGLRPPEYV VSETADWLPG GVTWLPERVA AVDPLARTVS
121 TEAGSTLSYD WLVVAPGLIL DHDAIEGFSL DMVGQNGIGA LYAGPEYAAR TWTAASRFTQ
181 EGGTGLFTRP ATEMKCAGAP LKHTFLIDDI ARRAGNAGQM NMIFTAPQST LFGVPIVAEK
241 VRMLFGDRGV DTLMNRTLRA IDAGARRAIF ATETGTEEVA YDYIHVIPPQ RAPDFVVQSG
301 LAWADRWGDQ GWVECDMQTL RHLRYPEIFA LGDVAGVPKG KTAASVKWQV PVVEDHLISA
361 IQGRAGTATY SCPLITRIGR AMLVEFDYHN NLVPSFPGII APLEELWISW LMKEVALKAT
421 YNAMLRGRA
SEQDB ID: 3101377CEV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDLTFSTLI AVFEEIFGRG LFWALTAVAV LVTLAYIYVL VRDRAVSWKK FLTAQLSMPV
61 GAVLAVWFVM VMTRSQLSDL GGPVDLIVLL AIAALGAVGM AILVYTLESL LGSRRTRGRG
121 PGAT
SEQDB ID: 3101377CEW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHLLLSTVL VAASAVAALA EGPAKLVTVV TSPDPQTQLM SMVLTMQAAQ QGAEAHILLC
61 GPAGDLALRE APASATAGQP PKDMSPQGLM QMIRAKTGAT VEVCAIYLPG RGADGSVLLE
121 GVGVASPAEM AARLMASDTR VLSF
SEQDB ID: 3101377CEX
Reference:
3101377
Name: cyclic nucleotide-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDASWIDQFK GLGGLPEPLR AELEAGSQIV SVPAGTQIFA PGQSADHLWL LLEGTVKVQQ
61 KSETGREVFL YRVHAGESCV LTTACMLAFE DHSAEGTCET DVSAVAIPRR SFDDLIARSP
121 VFREFVFTAY SRRITDLFTL IDDIVFQRMD VRLAARLLEL ADSDNIVRAT HAVLGTELGT
181 AREVVSRTLS EFQRRGWVEQ ARGELRLIGR DGLEHLVKSA GGHG
SEQDB ID: 3101377CEY
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLTKPLTLR FLNGDTVSLD RRAALMMMTC PIAVFIIVFS ASIVRTLSIF MLDVPVSWLA
61 AIALGLGMGA LLWVFFLCLS LVLIRLGRMT RDGIDLPVPL IGLLGVLCND IPMLWIYARV
121 FDLDIWTPMA AAMIVLLAFA VHLGFELLFA VVVLPLLARA RNQRPAPAGI PRPAPDPKLM
181 LDGETIAAKD ITLIQADEHY VFVHHGGRKS HVRQSFGSLV KALDKTAGMQ VHKSYWVAFD
241 HVQQVQPKRD GGLKLILKDK TAIPGARSRA RAFREALRSR AQMGAARTEP AKEGQF
SEQDB ID: 3101377CF
Reference:
3101377
Name: competence protein, Isotype: F
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWQQIQTAIE TVYPPRCLGC GDLVTSDFGL CGKCWRDTPF IDGTVCDSCG APLPGARDGH
61 RIECDDCMAH PRPWSDGRAA LLYTGRARRM VLALKHGDRP ELARPGGLWM ARAAAPLLQP
121 NMLIAPVPLH WSRLLRRRYN QSALLAQSVG RQTGLPVCPD LLVRDRATPM LEGMSMTERA
181 KTLSGAISVH PKRRHRLTAR KLLLIDDVMT SGATLAASAQ ACLNAGADQV FVLVLARVTR
241 EA
SEQDB ID: 3101377CFA
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNSIWLFLG AIAPERAMQT VPARLSGETY EPEGFVRVTR DVAAPETVVP MKLTYSGNGG
61 DPVTAETSGA VPVSVEATFA RGASREIAGG TLVSLSNGDL FYAPPAGDPI ASAPAQTGTG
121 GFRQIETLRL TGAGDPGAVT LASLGFVPET PLVAADKGPD IIEEIDPRGL LSDGTISGTG
181 LADRINIRYL GDRDGDVVDN LDAMGLNGEL PESDDDLIDA LGGNDTVESG RGHDTVMGGD
241 GDDSIDGGAG ADRLLGGEGA DTLDGGIGAD PLTPVYQQVT SVNQILDGVN SRPDFGVTTT
301 TNVTNVQFLS SGNVINGFHI GVDVSISGAN SLAREIHSHL ASSQVAGARI VLNNLETTER
361 VTVSIDGQVI DLNTAIASGT VEFDGAGVYV LDSLGRIVGT TDDDSVTMNV ELTLALKQPL
421 TRLDIDFESL VPSSGTTGAV YALSFDTNPV VAPRVSTAND TLFGGVGNDL LIGNDGDDSL
481 IGGDESDTLD GGSGADTLFG DNEGITSARA DGNDLLFGND GDDSLIGGGG SDTLDGGSGA
541 DTLDGGDGND SVLGQADDDL VIGGRGNDTL DGGSGADTLD GGVDNDSVLG GIGNDILFGQ
601 AGDDTLIGGD GNDSILGGIG NDSLRGGNGD DTLSGSDGND TLIGDSGRDS LVGGAGDDSL
661 QGGADADTLV GGTGNDSFFD GGGDDLVLGS EGDDLFFLGG GHNTIGDFGF DSGLKNDGNQ
721 SNNDFVNLAI NYNRTSYDAA VLNGDIDPSV IRNPLEWLRA DHADDGVLND LAAGWTANST
781 LTLSNGGAPV DPGQLTFDTT NVTCFCRGTL IATAGGEIPV EKLRPGDRVI TRDRGYQRIR
841 WIGGTSREAP TAVAPIRIRT GVLKNTRDLL VSPNHRILMM GPMVEFYLGH SEVLVAAKFL
901 VDGRAIVQEP PGRVDYYHML FDQHELVLSE QAWSESFHPG RVGWSALCDE TRAEILDLFP
961 ELDREYGDLE NSTARYVVDR HEALVLQQSL GAYGILQREM MAC
SEQDB ID: 3101377CFB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNRDQAQPR RQIPDTAEQH RLPAGYGRAY AVTGEDDPPT SSPRVAGAVL LFLGGVLGAC
61 AAGVAILTGE GVGRAVLLYF GVSLVPLAVM LVLSLVAGRK RRPPGPGVAV DCDATGAARA
121 AFVRNRRRRI LIGFVLLGTL AAFTLTESAV IRQGIVLLCA GLLLRRSLVG RMRKPSGVPT
181 APDRDPDTAT PEAGKTAW
SEQDB ID: 3101377CFC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVMEIHRERA AILGTKRNED DARVFARVRL RFSLAGQQSA ETSAIVVSVA VTAERNQPWR
61 RTRRQILASA WHWLERYFDG ASLEAGDRNL FSDVFEEQPW QKGSSLSPTQ ERGLQRDLRR
121 IAREHAV
SEQDB ID: 3101377CFD
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRQTASCSD PVAPGDSGRS GRNSGRVGLP TRDALRQSKV ADPACHRPRS ADPVRPITLD
61 NLVRTTMTTI DHLSLGVPDV AAAQNFYTDL LSNLGISCLA SGEGFAAYGR ERVAFLLLSP
121 FDGGAASAGN GAHVAFAAPS RDAVSAGHAA GLAAGATDEG APGPREAYPI PGVFAAYLRD
181 PWGNKLEIVH GGFSA
SEQDB ID: 3101377CFE
Reference:
3101377
Name: TfoX domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPVSSIRN LGPAMDEACA RAGIHSAEEL RALGADAAYA RLLATGTRPH FIGYYVLVMG
61 LQGRPWNDCK GKEKADLRAR FDAIKAATKP AAASRLVAEL DALGVRVRSE DLIAQS
SEQDB ID: 3101377CFF
Reference:
3101377
Name: cytochrome P450 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILQPPGPGE RRGAARQFTG RNVMSETVMQ TQIGKLDLTA PPPGFLENPF PFYDALLAHA
61 PVLAQPDGSV LLSRHADLDR IYRDTTLYSS DKKAAFGPKF GVGSPLFEHH TTSLVFNDPP
121 LHTRVRKIMT SALTPRAIAR MEPGLFETVD HLLEAMAGRD RVDLIADFAS TIPIQIIGNL
181 LDVPMDERGP LRDWSLIILG ALEPKLSAEQ LAQGQQAVTE FKTYLEDLVA RRRARPGDPE
241 TDVLTRLIRG EGADQQLSEI ELLQNCIFIL NAGHETTSNL IGNGLALLHD YPEERARLLA
301 DPSLLPSAVE EILRFRSPNQ LGNRETTAEI ELDGRRLPRG TNLHLCIGAA NRDPAVFDDP
361 TRFDIARKPN RHLAFAGGPH VCVGLTLARL EGRIALGRLL ERFPDYCLLE GRVPGGRIRF
421 HGYAELPARL
SEQDB ID: 3101377CFG
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKPLVLMRN ARTRLVLLSM VLSTAMTVAV LALVYVTANR TIAGETRSVV TAELAGLADE
61 YQRLGVIGLL TAIERRSQDA SERDALYLLT DRGGAVLAGN LVRWPPGVTA GSGWIELDLI
121 RTESGESVPV SAASIRLPGG EGLLVGRDAS ARRQFDRVLL RSVGLALLAA LALSLLTGWL
181 LTRLVFSRLK DISRTAGEIV SGDLGRRIPL RGTGDEFDRM AATLNEMLDR IEELVGHLRT
241 TSNSIAHDLR SPLSRLRQRV ETLTDPDRDP DERGADGARA LAEVDHLLRV FSQLTEISRA
301 EAGLGREEFE PVDLAALARN LGEFYEPLAA ETGVTLTVEA EAAPLPGHPA LLAQALSNLL
361 DNALRYAPAD SRVSLTVSET DTDIVLAVRD NGPGVPEEDL SRLAEPFVTL DPSRTGGNSG
421 LGLALVAAIA RMHGGCFEAE NRAPGLEARL TLPRGA
SEQDB ID: 3101377CFH
Reference:
3101377
Name: DNA-binding response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRRVLIVED DAETREFLAK GFAEEGFAVE CAGDGREGLY HATDGGFDAM VLDRMLPGLD
61 GLALIKSVRA AGLNTPVIML TAMSAVDERV KGLRAGADDY LVKPFSFQEL LARVEALLRR
121 PQDTQEATVL ACRDLEMDLM RRKVTRAGRE ITLTPREFQI LEFFLRRKNR VITRTMLLEG
181 VWDYHFDPNT NIVDVHISKL RRQIDEGAEV PLITTVRGAG YMISDG
SEQDB ID: 3101377CFJ
Reference:
3101377
Name: periplasmic Ser protease, Isotype: DO/DeqQ-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIRMSRKLT PSLPAWAAAP ALGALLLSSA ALPVSADEAL ADLVEQVAPS VVTVLASQNA
61 APRPTGAQPS PFEGTPFEEF FHQFGGPRGM PMPDSGPRQG LGSGFILDSE GYIVTNNHVV
121 DGADRVTVRL SDDREFTAQV VGTDPLTDLA LLRIEAGEAL PAVSLGDSDA IRVGEDVVAV
181 GNPFGLSSTV TTGIVSAKGR NISDGPYAEF IQTDAAINKG NSGGPLFNMA GQVVGVNSVI
241 YSPSGGSVGL GFAVTSNIVD HVISDLREDG QVDRGWLGVS IQNLGADIAA ALGLDQTTGA
301 LVSEVVADGP SDGTLRPGDV IVAFEGKPVR TSADLPRLVG ATEAGTRASI RVMRDGKAQD
361 IAVTIGTHQA SAEVIPASAD SPADAPGLGL TVAPLSAEAR KGAGLDSDTG GVLITDIAPD
421 GPAARAGLRP GDVILRLGGS DTISPAALAK ALESEKTDPA LMLINRGGNQ IFLAVKIT
SEQDB ID: 3101377CFK
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATNFDNPYS ANLIGLWDFR PGAENNDTGL GDGIAQDGTP VNGADFGAGW MYTGQPDQRM
61 DVDDGDDDQF DLDEGSLITS FRVFGHPGDG PYTVVSRGAE DSGNVDDGAG TTPGADSGYF
121 EVRVTNDSKI EVLHRSNGVE EILSTGANFY NIGDIVTVTY AWSDNGLDMR VVNETQGTET
181 TVSSDQTGMT LDVTTGDEQS FAIGAREATE GDFDQNFFGG VDYVAVLDKP VIGQPNGIVD
241 GTPGNDTIDL GYTGDPEGDV IDGGDAVDPT HGPDDDVVDG GAGDDSIDAG EGDDTVYAGS
301 GSDTVNGEAG DDLLIGDGNA PGGGAGGSTR EVFEWFRAPD PDDASDVDDG DDLSGGFTQN
361 TGGVDVSFSV LNADPGVTTV FTTEEQFVGN IDSNGPDASD DSAMESELNG QTNTAGYQLA
421 FSEPVTNVSF RINDIDGDGQ ARVQAFDADG NPITVNIAGG LNVTESDTDG VAGNETATGD
481 GGYAGANNSN YSILVTIPGP VARLTIEHSQ DGANPSEISV SDVYFDVPNA DTGVDGDDSL
541 TGGEGDDTLI GQGGDDTLTG GDGNDSVDGG DGDDVIDTTG SLSGNLPDRG FPSYNGLPAV
601 PADPVVDDDR DTVDGGDGND VIMTGDDTDL ITGGAGNDSI DGGLDDDTIE GGDGADMIVG
661 GEGADSILAG SGDDVVYGGL DPRFPDNLNI RDDGTDGPAD PETTNGLDFI DGGEGNDTLY
721 GQDDDDTILG GSGDDLIDGG IDEDSIEGGD GNDTLLGRHG EDEIHGGSGD DVILGGTEAD
781 RLFGGDDRDT IGAGIGDTIV GGEGGNDFDV AIATGLAVVD YDPTDPTGES GTITYYNPDL
841 TVAGTAEFSE IENVLVVGNP GGSPTPPPGS GPTPPPSYDG IVDGTPGNDT IDLGYTGDPE
901 GDLVDGDDAV APLVDEQDVV LAGDGDDLVR SGLDTDVVFA GDGNDTVYGE EGGDAIDGGD
961 GNDSLDGGAG RDIVFGGEGD DTLSGSNENP DDGGDILGGG FGDDRFVNVG QGEVIIGGED
1021 ADGMDEDVLD LTNAAVPGGR VTVEYDAGDP EAGIVRYFDA GGAETGTTTF SEIETVILPC
1081 FTPGTKIATP KGERLVEDLE VGDRVITRDN GIQEIRWVGS RTLSGAELAR AGHLNPVLIR
1141 QGALGGGLPE RDMIVSPNHR ILVANDKTAL YFEEREVLVA AKHLIGLEGV DIVEISEVTY
1201 IHFMFDQHEV VLSDGAWTES FQPGDLSLAG LADAQRDELL ELFPELKTRE GVEAYAAARR
1261 SLKKHEARLL M
SEQDB ID: 3101377CFL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIIPILLLA AGQSRRMGGA DKLMQEIDGM PLLRRTALRA IPVAPVIAAL PPAPHPRHGA
61 LVGLTLDIVE VPDAAEGMNA SLRRAVAALP PEAPAAMILL ADLPDLTESD LNTVRRAVDF
121 SQKNLIWRGA TEDGQPGHPV VFHRCLFPQL LALRGDQGAQ PLVRDHADRV ALVPLPGQHA
181 RTDLDTPEAW ADWRARQQ
SEQDB ID: 3101377CFM
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTTTRVAVI GGGVVGCSVL YHLTKLGWSD VMLIERSELT SGSTWHAAGG FHTLNGDTNM
61 AALQGYTIRL YKELEEITGM SCGLHHVGGI TLADNRDRFD MLLAERAKHR FMGLETEIVG
121 PEEIARIAPI TNLDGIIGAL YDPLDGHLDP SGTTHAYAKA ARMGGATIET HCMVRETNQR
181 PDGTWDVVTD KGTIHAEHVV NAGGLWAREV GAMAGVYLPL HPMEHQYIVT DDIAEIYERD
241 SEHPHVMDPA GESYLRQEGR GLCIGFYEQP CKPWAVDGTP WEFGHELLPD DFDKIEESIE
301 FAYKRFPVLA SAGVKSVIHG PFTFAPDGNP LVGPVPGLRN YWSACGVMAG FSQGGGVGLM
361 LAQWMIEGET ERDVTAMDVA RFGRWISPGY TRPKVIENYQ KRFSVSYPNE ELPAARPNRT
421 TPMYDIFSDM GAVWGQQFGL EVANYFAQGD EPTYETPSFR RSDAFAATGR EVRGVRAGVG
481 INELHNFGKY LVSGPGARAW LDRIMAGRIP ATGRLSLTPM LSAKGKLIGD FTVSCLGETE
541 FQLTASYGSQ DYHMRWFEQH QEDGITIENI SDKRNGFQIA GPNARAVLAA CTRDDVDNLR
601 FMDVRRMVVG MTDCIVQRVS YTGDLGYEIY CDSMAQRQLW WTLWQAGQDH GMIPFGMRAM
661 MSLRLDKFFG SWLREFSPDY TAAETGLDRF ISFKKNADFI GRAAAEAERA AGPARRLCAF
721 EVDAEDADVN AYEPIWLDGA VVCFCTSGGY SHHAGKSVAL GFLPVERIAD GLEVEIEILG
781 QMRRARVISQ PLFDADGARM RG
SEQDB ID: 3101377CFN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDKFLNIAR RMLRLLYVRI ILIAALSLMS VPLAALLGDL IPPGLADRIG AAAVDPILAT
61 LATSMLAVTT FSLTVMTGAH RAAWSQWGPR THVILKDDTA THSILAVFVG AYLFAMSGMV
121 LRRTPIFGEQ ESVALFAMTM VVIALIVVSI IRWIAHLEDL GSFGETLAQV ERRTAVSLRA
181 LARTPCYGAH ALTEEIALPE NGQVIGARGP GYVQQIFVES LQQLASQAEG RIYVTVSVGD
241 YVQEGQELAR FDTREVSEED ASAARRAFAI EGARTFVQDP LFGLSVMGDM ACRALSPGIN
301 DPATAITVID RLSSLLLLAE PERGARDAPD CDRIWLRPLP AEALFAETFD RIARDGASVI
361 EVQLAVQRAL AAVSARAEGA LLQAARRSAA RSLARGLEGL SGAEDRERLQ RASLGS
SEQDB ID: 3101377CFP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRAVRIWGW FDAVILDLGR QMRWSFLPPL MVYFAAGAQG LTAVVGTFFV KEYLDVSAAF
61 IAGLAFWAGL PWALKMPLGH LVDLIWRWKA WLIYLGAALI AASFAIMYGL ATRADWMPAI
121 MSVTAWYVLA VILAPCGYVV QDAVADAMSV EAVPRHDAQG AELPPEVQRA QHTTMQTLGR
181 FALIGGASAV AALNIILFDG IEALSPAEKA AAYGRIYALA LLIPCISISG VLLAAWQKRQ
241 AIARLIAQGM DRVRALATFD PEGEKVRLNH WYFTGGAIFV AMTLTVGLLD LPFSQEIVFA
301 GSMAIVLTLM RQLVRNLDRA QARALIGTAI IVFVFRAVPL NGAGATWFDI DVLGFDQQFL
361 SLLYLITTVL TLVGMVVLRP LIASKTIADI VILLTLASGV LSLPGIGLYY GVHHWTAAMT
421 GGVVDARFIA VINTAVESPL GQVAMIPMLA WIARNAPANL KATFFAVMAS FTNLALSASS
481 LGTKYLNQLF QITREVRGAD GTVTVPADYA QLGYLLMTVA AITVLAPLLT VWLVQQSRFK
541 SRD
SEQDB ID: 3101377CFQ
Reference:
3101377
Name: CBS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDPSAPALDS AFWITTGAIL LLLILSGFFS GSETALTAAS RGKLRSQADK GSKGAQKALA
61 ITDDNERLIG SVLLGNNLVN ILAASLATAL FTRAFGESGV ALATLVMTLL VLIFAEVLPK
121 TYAITNSEKA AAAVAPIIGV VVMVFSPVVA LVRLLVRGVL RLFGVRIDPD SHIMAVREEI
181 AGALYLGHSE GVVEKEDRDR ILGALDLAER TVEEIMLHRS NIVMLDADAE PETILEHCLQ
241 SPHTRLPVYR GEPENIIGVV HAKDLFRAMY AQVGGSEGHT ARLKDFDISR VANAPYFVPE
301 TTTLDDQMRA FLRMRSHFAL VVDEYGSLRG LITLEDILEE IVGEITDEFD PAAEMPVTRS
361 DDGQFLVDGA MTIRDVNRAM DWSLPDDEAN TVAGLVIHEA QMIPTVGQVF AFHGFRFEVT
421 GREGNRITGL KIRPL
SEQDB ID: 3101377CFR
Reference:
3101377
Name: Tyr recombinase, Isotype: XerD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xerD
Sequence:
1 MPAAPTHPHQ WISTFLDAQA AELGAANNTL LAYGRDLKDF TDWLERRGAT LNGAERDTVE
61 AYLVDCDAQG LARATRARRL SAIKQLYRFA FDEGWRADNP AIQIKGPGRL KSLPKTLEVI
121 EVDRLLEAAR QTGRTSADRL RNTCLMELLY ATGMRVSELV SLPATAARGD PRMLLVRGKG
181 GKERMVPLSP PARAALAAWL TVRDAAEEDG ARRGIARSPH LFPSRGKSGH LTRHRFYLLI
241 KELAVAGGVS PDTVTPHTLR HAFATHLLAN GADLRTIQTL LGHADVSTTE IYTHVLDARL
301 TELVLDHHPL ARGDKPETE
SEQDB ID: 3101377CFT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQGLGHRIG AAALQGGLEP LHRFDPVPDA ARGGRAALGI KTQQLIGRQS ADAGQPFGRL
61 ELGLPARQIT QVGIGKGTRQ AGGVQRLADC LEQAEGQRIG ARGCGRRWQI LEDLGAEEPV
121 EQRQRRLGQQ LQRMGGFQRQ RRRGPVAPPR GAKDQRAVIG GQMRAGGQRG AAAVLVPGQQ
181 GRIEPAPEPL LRGGRAGQLD QRLRRVHRAQ LHQPIHPRQQ HGLGGLTAGI GGAGFGQEQR
241 IEQGLHRRVV AHRYPHQPFG QQDRVAALPQ VQRQAGHLGR DQPQRYRQRL ERGDLDLRGQ
301 SAFGHRRFQQ HGAGQGFGRR VGQPVDHRQR RLLGEARNRQ AHEKCRQPDA FRDRPVPSPH
361 PEPPAGAVRS AEPRNRPRRT GPDTRIQSAR SRRDR
SEQDB ID: 3101377CFU
Reference:
3101377
Name: shikimate kinase, Class: EC2.7.1.71
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroK
Sequence:
1 MSKIEHNSAK TIDGGAAALH KTVVMVGMMG AGKTAVGRAL AQRLGVPFLD SDAEIESAAN
61 MSIPEIFERD GEAFFRDRES RVIARLLEGA PCVLSTGGGA FLAEANRRMI SEHGVSVWLK
121 ADLTVLWNRV RHKDTRPLLR TADPRATLRA LYEARVPLYS EADLCVISDG ETSIEQMVDR
181 VIAALATRKD VLELS
SEQDB ID: 3101377CFV
Reference:
3101377
Name: 3-dehydroquinate synthase, Class: EC4.2.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroB
Sequence:
1 MMKTVHVALG ARSYDVEIGP GLIAEAGARI APLLARKRVA VLTDETVAAL HLEALREGLA
61 AGGVTMEALA LPPGESTKGW PQFERAADWL LDQKVERRDV VVAFGGGVIG DLAGFAAAVL
121 RRGVRFVQIP TSLLAQVDSS VGGKTGINAS HGKNLIGAFH QPSLVLADTA VLGTLTARDF
181 LAGYGEVVKY GLLGDAAFFD WLEGQGPALA AGDMAARVEA VTRSVQMKAD IVARDETEQG
241 DRALLNLGHT FCHALEAATG YSDRLLHGEG VAIGCALAFE LSARLGLCSQ EDPSRVRAHL
301 KAMGMKTDLT DIPGDLPTAD VLVDLMAQDK KVVDGQLRFI LARGIGQAFV TSDVPREAVL
361 TVLEDALASC
SEQDB ID: 3101377CFW
Reference:
3101377
Name: SREBP protease/CBS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWSFTLGRL FGSELKVHVT FFLLIGWIGV SAYQMGGWPS AVENTAFVLA LFACVVAHEY
61 GHALTARRYG IRTPDITLLP IGGLARLDRM PEKPGQEIVV ALAGPAVNVA IWAALTLVGV
121 DTRFETLAAI DSAEPDFLGR LAMVNLFLAV FNLIPAFPMD GGRVLRAALS LTMDRVRATR
181 IAAAAGQLVA LLFGFAGLSG GNPVLVLIAV FVFIAANAEA QDVAMRAVTR RLLARDAMIT
241 RFEALGPTDT LATAAQAVLH TTQHEFPVLD GEGHLLGFVT RARLFAALAA DHPRSDPAET
301 VMDREIPQVP LASGLETVLD ALYQGAPAVA VTSADGRMLG YVTRENVGEL MVIQGR
SEQDB ID: 3101377CFX
Reference:
3101377
Name: single strand-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ssb
Sequence:
1 MAGSVNKVIL VGNLGRDPEV RTFQNGGKVC NLRIATSENW KDRNTGERRE RTEWHSVAIF
61 SEGLVRVAEQ YLRKGSKVYL EGQLQTRKWQ DQSGQDRYST EVVLQGFGAT LVMLDGRGEG
121 GGGGGFGGGQ GGGDSYGGGY DSGPAGDPYG GGPSGGGSSS GGGRGRGPAS GGIDDDEIPF
SEQDB ID: 3101377CFY
Reference:
3101377
Name: transglycosylase SLT domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLFSGFIA AAVAVTAMPA GADMFSTKNR RDLFQKQARL LDTRGASQYE SSTRLQPPTA
61 QTTPTRRYAG KYKGEYLQMA RDAARRHNIP EDLFLRLVQQ ESGWNPHAKS HKGALGLAQL
121 MPGTARALGV DPGDPYENLD GGARYLSRQY RKFKSWRLAL AAYNAGPEAV EKYGDVPPYE
181 ETKNYVKVIW GS
SEQDB ID: 3101377CG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTPGSSLPP ALVDRTALAA RRARMRDAAL FLHHAALDEV QDRLSLVNRT FTDMAVVTPA
61 PALWAGSFPM ARFVAEDEML DLAPQSCDLV VHAMALHWAN DAVGQLIQCR RALRPDGLLL
121 AICFGGQTLH QLRAALAEAE AQVSGGISPR VAPMAEIRDL GALLQRAGLA LPVADSLTLT
181 AEYRDLPHLM RDLRQMGEAN ALSARLRHPT QRAVFERAEE IYAAHFATPD NRLPATFELI
241 CLTGWAPDDS QPKPLRPGSA SARLAAALGT SETPLPD
SEQDB ID: 3101377CGA
Reference:
3101377
Name: fadB domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVDGLSALV TGGASGLGLA VAEALTNAGA KVAFLDLNEE KVSQVADQIG GVGIACDVSD
61 PGAVSDAWAI ACGHNGQILI DVNCAGIPGG MRFVGRDGPV DMATFARVIA ADFIEAVGVK
121 TKDAARMMAL VPLTESGERG IIRLDPGLRL QLR
SEQDB ID: 3101377CGB
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTRRLPHLT WLRAFEASAR HLSFTNAAQE LNLTQAAISK QVKLLEHYLR EPLFERKPRS
61 LVLTKVGAAY LPKVRDGFER LAAGTEEVFG LRRSEVLTVR APVGYSVNWI APRLQGFFDR
121 HPETEVRLVS SVWGDQFDNE RFDLDIQYGT GRWPGYKADR LTWEVIKPVC APSLLEGEHA
181 IRKPADLAHH RLLHVLGYEE GWAEWFRYAK VSGINSGQGL QFDTSLLAFE FASRGGGVAL
241 ARSSMLGIEI ERGRLVEPFN IEAPLQEAFY LISPETGRDH PDAQKFRDWL IETAESDPEN
301 RRNRETYRS
SEQDB ID: 3101377CGC
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIDSKQGFD PQRLRRISNW MEAHVREGRL SGLAVQIARR GEIAFSERRG YADTATRQPV
61 APDTIWRIYS MTKPVTSLAL LMLYEEGAFQ LDQPVADFLP AFCDPRVWKG PGHALDATEP
121 ARRQITIHDL LTHQAGIIYG DRQGNALEQA LSAAGLDFDR DLVTMGQAVD ALAGFPLAFH
181 PGERWFYGLS TDVLGHLVEV ISGQPLGAFL KTRILDPLGM KDTGFSVPAD KASRVATLYD
241 HSSGGFIPSA NQDRCLAPVT LESGGGGLVS TMADYQRFAT MLLGRGAFDG GRLLGRKTFD
301 LMVSNHMGGD LASRGQAHFS ETTFEGIGFG LGVSVMLDPA RAMIVGSPGE FAWGGMASTA
361 FWVDPVEDMT VILMTQLIPS SAYTLRRQLR VLSYQALV
SEQDB ID: 3101377CGD
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGWPLAVSAA LMERKPGRLW RALAALAGGH LLSMLAILLP FTVLLWLVDY QRQIQIGAAL
61 LVIALGIYLT INRRHPRFLA RVRPTQLALW SFLAALAHGA GLMLVPIYLG ICKTIETDAG
121 HAAASVLMTS NTTVALGVAL LHSLAMMTAG GALAFGVYRW LGLKFLSKSW FNLDLVWAAS
181 LILVGVIALV MA
SEQDB ID: 3101377CGE
Reference:
3101377
Name: Se-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLRPDPTFY PSAKLAMEGP VEKLAFTLML SPDASKPDGL AVVDVDPTSE KFGQIVHQLI
61 MPNKGDEFHH FGWNACSSAL SPLTGHAFLE RRYLIIPGIR SSRIYIVDVK EPLKAKIHKI
121 IEPEEVFAKT GYSRPHTIHC GPEGIYVSTL GGGGEDGTDG PPGIFILDCE TFEILGRYEM
181 DRGEQTKHYD FWWNLPRDYM VSSEWGLPPQ FENGIVPEDL LSNKYGHKIH FWKLRDRKNV
241 QTIDLGANHQ MALEIRPAHD PSKDYGFCGV VVDTTNLQGA IFTWWQKDDG TFEAKKTITI
301 DPVPADADDL PDLLKGFGAC PPLVTDIDLS LDDKYLYVAC WGLGEMHQYD VSDPMNPVLT
361 GKVEIGGIVK KTPHPNGKTF GYGPQMVEIS RDGKRVYWTN SLYSTWDEQF YPGDRGAAMV
421 MANVGENGGL TLDKDFWVDF PAGYRSHQIR LEGGDCSTDS FCYPSV
SEQDB ID: 3101377CGF
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDILTIKNL RVEGRPPGGA YVPIVKNVSL NVAKGEVLAL IGESGSGKST ISLASMGFAR
61 PGCRISGGEI WLNGRDIMKL SPHNRHALRG DEVSYVAQSA AASFNPALRI GRQVIEAPLW
121 HGAGDAATLT ATAVDLYRKL DLPNPETVGD KFPHQVSGGQ LQRLMAAMAM SCGPDLLILD
181 EPTTALDVTT QIEVLKAFKD IIRDQGTAAI YVTHDLAVVA QVADRILVLK NGEMVEEGPT
241 AQILHDPQHE YTRTLMDAVR PAPHLVDHVD ASAAQAPVIS VRSITTGYGA LTILSDVSVD
301 VPAASVVGVI GESGCGKSTL ARVVAGLTPL REGEIKLDGK IAAPSVKDRP RDTLRDCQIV
361 FQMADTALNP RQRIGDILGR PLEFYQGLKG RARADKVGDL LELVDLPRSF ASRFPGELSG
421 GQKQRINLAR ALAADPKVIL CDEVTSALDT VVAAGVIQLL KSLKDKLGVA YMFISHDLST
481 VASFADEVVV LYAGRVVEKG PSKAVFSPPF HPYTKLLLSS VPEMRQGWLE GVADTGEAKA
541 ASAGSVVIGA RGCPFANRCT HVIAGTCDRI TPPPRDLPGG LTIACHLEEA KLP
SEQDB ID: 3101377CGG
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDATEIAKP RASVFAGLRL TWTAVLAGSV LLFWLILALF GPWIAPHGEA EIISGTTFAP
61 IGEGGLLGTD KLGRDVFSRL IYGVRTTLLL ALITTVISFT FGVTLGFAAA ILKGWFDIVV
121 SRIVEAFMAF PSTLLALVVI GAFGTSITVL VLTVGLVLST SVFRVSRALG YDIGVMDFVE
181 AARARGEGTW WILTREILPN SMAPLIAEFG LRFTFSILFL SGLSFLGLGV QEPAADWGLM
241 VQENVGGLFL GSSAALIPAA CIASLTVAMN LLVDWFQQRQ QGETVLEKID Q
SEQDB ID: 3101377CGH
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYRIILTRLA QGLLTLLLAS IIIFGATEIL PGDVAEAILG QSRTDEALAA LREEMGLNRP
61 AIVRYFDWLG GMVQGDLGTS LATKRPVADM IESRMWNTLR LALLAAAISV PLSLALGLWS
121 AMRAGGKVDK TLAMTTLALI AVPEFFIGLI LMKVFAVELK WFSASANTRP YFDFWQNFRA
181 LALPVATLSF AVLAHMMRMT RSSVINIFTS PYMEMAALKG LPKRRLVVLH ALPNALSPIL
241 TVIALNLSYM VSGVIIVETV FGVPGLTRLL VDGVTLRDIP LIQACAMIFG AVYILLNLLA
301 DVLSIMANPR LRYPK
SEQDB ID: 3101377CGJ
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFVPRPSAPQ SLCNSGAARH RSSGRKDMSD IDSLVRQYKA GALSRRGFFK RAGAFGLLVP
61 AASGILAMAG PAFAEQPKRG GWLRIAQGNT DDTAEPVRMT DTADAVYGNA IYQRLTRLLP
121 SLEVEGDAAE EWSVNDAATE WTFKLRSGLT FHNGQSVTSA DVVESLSRHI AEGSESPAKS
181 LLSAVTALEA PDPMTVKITL SSGNADLPVI MSDYHLSIHP EGFTDFAHAI GSGPFKVMEF
241 IPGERIVLER FENYYEEGKP YLDGVDFIPV PDANATLSAL LADDVDIIYD VPAFAADQLN
301 TNSSVTLFNV PSGSFTNMVM MVDRAPTNDP NFRKGVKHAL DRELVLSQVF KGIGTISADT
361 PIGPTYKYWC SDVKPAEYDP DKAKFYFDKA GLSGFDLYTS ETAGASANDI ALTFQQSAKG
421 AAEVNVIKTP SDGYWSHTWM QKPMTMSGWN ARPTVDAFLS IAHMKGGSWN ETMWGTDETD
481 AMIVAARAEL NEDKRRQMYC DLQHMMNEDG GFVNAVFQNQ LSAANTRVKG YAPHPVGSLG
541 GFFSVGRDIW LA
SEQDB ID: 3101377CGK
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSISPSTRL RPSPFYEATL ADGVCAMTTY NQMLMPTSYG HPEEEYWRII NGVSMWDVAV
61 ERQVQLMGPD AGRLAQILAP RDLSKCKIGQ GKYVPLCNHN GVLINDPILL KLDEDRYWLS
121 IADSNIWFWA EAIARERGLK VEVSEPDVSP LAVQGPKAET VVASIFGDWV RDLKYFWFRE
181 TEIDGIPVAV ARSGWSKQGG FEIYLMDGTK GTALWNIVKE AGQPQGIGPG NPNWCERVES
241 GLVSYGGDSD GQTNPFEVRM GKYVDLDLPD DTIGIEALRR IAAEGPKRHQ LGVVLDNSEP
301 VKAEFTWNDI DMDGMRIGDM TTCVWSYRMN KNIGFALVAT SARPGDRVVV RRAAGAVEGT
361 LCDLPFL
SEQDB ID: 3101377CGL
Reference:
3101377
Name: invasion protein, Isotype: IbeA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVITEPARQ TPVIHNTDVL VVGSGPGGLA AALAAARAGV DVCLVERFGC FGGNITVVGV
61 EGFAWYRHEA TVEAGGIGRE FEDRAREMGA AVPESQSLSY EIDSEGFKLV ADRLVEEAGV
121 HGMLHRQFVA PVMEGDRVAG IIVESKAGRE AILARVVIDA TGDADVAHRA GAPTLKTPAE
181 HMQAASVMFH LAGVDKAAFM AEVRRDPQTY KDWSTGEWTV ETDGKEDDMF SPFLKKPFAK
241 AIEEGVIPPH LNTIAGTWGA MHDTGELTYM NLVHLAGVDG TDPDSLTQGE IEGRRQAMLA
301 IEALRRFMPG CGGVRLRNFG MTIGIRDTRK IRAAYDMTET DVRQQGRFDD SIGIYPEFID
361 GYGVLIIPTT GRYMQIPYRA VLPGKVKGLL VAGRAIGGDR IAHAATRNMA CCAVAGQGAG
421 VAAALAVKTG CDVAQVDMAG VQAELLRQGV RIA
SEQDB ID: 3101377CGM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEPIREFET DLLVLGNGPP GSWRHSRRRG RGFAFG
SEQDB ID: 3101377CGN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVMFDRLDQ AGVILHLDAI SGPPARAGIR IGVVSAQGRL GQLRFLPRVV IDCSGKGDLS
61 ARIGVPYTLG DERGNMMAVS RTFHMVGADP QAVFTRGDPC FRHTRHYQGR LPSDLYKL
SEQDB ID: 3101377CGP
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVARATQER RRRCHQVARF LVEDVPGFRA AQRWGLVPAV GGRETRRLQM LYRILLGTCY
61 LPGDLRQQID AFDDHHNHRR CHESPQNLAP ANVYFGHGQT ILKKRERVKR MALETRRLLH
121 RKSPARSKQP DGSAPLRASA AICPKTPDDG QSGTQIRHRR HFLASTERAP HPVQEKDKAR
181 SGCACVDGPK
SEQDB ID: 3101377CGQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQITLTCQTW LPSSTASSAK RWKPANANRH GSSYVSCTDS AQPNSKQGDY SSCPCLFRRL
61 QSVMQNRGIK RRCAAPFDAR TLHSRMTLRR KRRREAGEFQ SPNRSKGNAV TFGGICKRLG
121 LCVTPTFDHI NAALRRDQIH VEPAVQARSR KRVLKGVDAS WWRRGVKKTT VLASLISKGW
181 RKHRLGQRVP NPSGHLFSDH LAYRTGLPDR QQGHDPNGDG AEPHCPNS
SEQDB ID: 3101377CGR
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKAGGPAPS PSGLEPVAPQ IATPRDIWSK RKKAFFALRQ GDKNMSKMAE YDGPILEIDK
61 LSISFFTRLR EIPAVMDFSV TVQPGEAVGL VGESGCGKST VALGVMQDLG KNGRIVGGTI
121 KFKGRDLAQM SAEELRDIRG NEIAMIYQEP MASLNPAMKI GRQLMEVPMI HEGVSADEAR
181 KRALEVVSDV RLPDPERMLN SYPHQLSGGQ QQRIVIAMAL MSKPALLILD EPTTALDVTV
241 EAAVVELVKD LGKKYGTSML FISHNLGLVL ETCDRLCVMY SGEAVERGSI KDVFDEMQHP
301 YTQALFRSIP LPGADKNSRP LVAIPGNFPL PHERPPGCNF GPRCDYFEAG RCDAQDILME
361 AVPGNDRHHT RCLKFREIDW NAPIMLAAQK EKGEIGEVVL KMDNLKKYYE VSANALFGGG
421 EKKVVKANET LSFEARESET LAIVGESGCG KSTFAKVLMG LETATDGHIL LDNRSIEQIP
481 IEERDTKTVS DVQMVFQNPF DTLNPSMTVG RQIIRALEIF GIGKTDGERQ QRMLELLDLV
541 KLPRAFAERM PRQLSGGQKQ RVGIARAFAG GARIVVADEP VSALDVSVQA AVTDLLMEIQ
601 REQKTTLLFI SHDLSIVRYL SDRVMVMYLG HVVELGTTDQ VFSPPYHPYT EALLSAVPIA
661 DTSVIKEHIV LEGDIPSAMN PPPGCPFQTR CRWKSEVPGG LCDKDVPPVR QLGDGHQVKC
721 HLSDEVLARM GPVIKIAAE
SEQDB ID: 3101377CGT
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEPLGTFEII IRVLYQLSSV WIALLLLFAL SIAFKRRLGL YGKLFDSPIG MIGFALVMFW
61 VFVGIFGAMD MIITHDPLSQ VSGMKNKVPG TPLAGAAEGD YAWYLLGGDN LARDVFSRVI
121 KGAWIVVQIA PLATLFAFMV GITLGLPAGY YGGRLDTFLS FLANLILAFP VILLFYLLVT
181 PEIVATGLPT MMAIVLFMFP IVFLCVLLNS RYRTQPAFRT PLLIGVLGFA LWLYLALISE
241 NGYLVRSIPG LPSVLDPFDI PGGILVVFVS VVFVNSPTVF RIVRGLAMDI KTRDYVAAAQ
301 TRGEGPWYIM LWEILPNARG PLIVDFCLRI GYTTILLGTL GFFGLGLPPE SPDWGSTINE
361 GRKLLSIYLH PALPPALALL SLVLGLNLLA DGLREESLKD
SEQDB ID: 3101377CGU
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLFILRRFG VMLLTALCLT FIVFFLTNLY PNLEKLAKTQ GNQRMSDEQV QTWLDNRGYS
61 DPLLTKYGRW LGVMPGFTNT LNDGQFVGTC VRPGLTPEET PRFCGIVQGD WGYSTRFKAD
121 VDEIIWKRLG NTLYLMMWVM ILMVPSALIV GVLAGMREGS RTDRSLSTFS ILSTATPEYV
181 SGVIFIAVFT SSTVGLKWFK GTATQAMEQP TFENFFLPVL TIALYGMGYI ARMTRASMTE
241 VMTAQYIRTA RLKGVSFPNI VLKHALRNAL IAPFTVIMLQ FPWLLNGVVI VESLFNYKGF
301 GWVLVEAAGN NDIQLLLAVS VVSVFVVLIT QLISDIGYVY LNPRIRIS
SEQDB ID: 3101377CGV
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKAIIDAGR NLLRNGCMGT PEFHRTGPGL QRRTGRSTVR GPTANRKSHR ETFMTTYETR
61 QQPVHWAAEM HAQEFRDGKL SRREFLTRAT GLGVSAAAAY GLIGLTAPTP AAASEAKQGG
121 TLRVQMNVRE LKDPRTYDWS ELGNETRGTM EYLVEYNSDG TFRGILLESW EINDDATVYT
181 LNVRKGVKWN NGDDFTAEDV ARNIARWCDK SSETNSMAGR FASLIDADSG QAIDGAIEVV
241 DSHTVRLNLP NSDISLIAGM SDYPAAIVHS SFSESDLTNN VGTGPYVIEL LEVGVKCVLV
301 RNENHTWWGE AVFGRPALDR IEYIDYGTDP SAWLSALESD EVDMLHESVG EFIDVMDGLG
361 YAKSEVVTMS TVVVRPNQLA EVDGKKPYAD KRVRQAISLA VDNAICLELG YGGRGAPAEN
421 HHVGPSHPEY AELPARKHDP AAAKALMEEA GMMDFEHEIH SIDDDWRRNT TDAVAAQLRD
481 AGFKVKRTVL PGSTFWNDWT KYPFSSTNWN HRPLGVQIWA LAYRSGEAWN EFGWANPEFD
541 AILSEALALA DADKRREVVA RGQALIQEEG VTIQPYWRAL YRHMKEGLVG TDMHIAFEHH
601 HYKWGWAA
SEQDB ID: 3101377CGW
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHDPAEIAE IRLSTLAQLM PLGRWQVQLA HDRGHHLLLW ITRGQGTGLL DGGRIGFGTH
61 NALFVPARHL MALDPGRGCL GQALLIPASS AIPLPTRPLL LRIRAAADQG ELTGLLDALS
121 REQSGTRALS ATAMESWAQL AAVWLRRQSD HDDLPRPGER ARDLSRRYGA RLVQAFDSGA
181 TVAEHAAAID VSPAHLTRLC KTATGLGASE LLHNRLEHAA RGLICTSPAG LGDIARHLGF
241 ASSAVFGRFI RRRTGLTPGA LRRSVQPK
SEQDB ID: 3101377CGX
Reference:
3101377
Name: tRNA delta(2)-isopentenylpyrophosphate transferase, Class: EC2.5.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: miaA
Sequence:
1 MAVGAALPPI PEGAPVLIAG PTASGKSALA LEIAERFGGV IVNADASQVY DCWRAISARP
61 SPEEEARAPH LLYGHLPYDA PYSAGHWLRE VTPLLDGTAR PIIVGGTGLY FTALTEGMAD
121 IPATPPDVRA EADTLPLDRL LAGIDPATAA GLDRNNRARV QRAWEVERAT GRALHLWQAD
181 TPPPPLPLAR TVPLVLEVDK LWLWDRIARR FDQMLDQGAL DEVAAMAARY DPALPAFKAI
241 GVPELMAHLR GEITLDAARE RASIATRQYA KRQRSWFRAR MGDWHRLPVG G
SEQDB ID: 3101377CGY
Reference:
3101377
Name: uridylate kinase, Class: EC2.7.4.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrH
Sequence:
1 MTSSTSPETP SDPSQTRYKR VMLKISGEAL MGDQGFGLHP PTVKRIAHEI KTVHDMGVEI
61 CMVIGGGNIF RGLSGAAQGM ERTTADYMGM LATVMNALGM QAALEGLGVF TRVISAIRMD
121 EVAEPYIRRR AVRHLEKKRV CIFAAGTGNP YFTTDTAATL RANEMACEAI FMGKNGVDGV
181 YDKDPALHDD AVRYDEISYD EVLAKRLKVM DASAIALARD NNLPLIVFSL DTAGGFRGIL
241 AGEGTYTKVQ G
SEQDB ID: 3101377CH
Reference:
3101377
Name: ferrochelatase, Class: EC4.99.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemH
Sequence:
1 MGRVGVLLAN LGTPDDYSYW PMRRYLNEFL SDKRVIDYPA WKWQPILQGI ILTKRPFSSG
61 AAYESIWNHD KGESPLMTIT KDQTAKLRAA LAERYGDRVM VDFCMRYGNP STKSKVRQMV
121 TEGCDRILFF PLYPQYAGAT TATANDQFFR ALMDETWQPA ARTVPAYFDQ PAYVDALAQS
181 IERAYAAMDS RPDVLVCSYH GMPERYLMQG DPYHCQCVKT TRLLRERLGW DESEVVSTFQ
241 SRFGPEEWLK PYTVDHVAEL ARQGKRNIAV VAPAFSADCI ETLEEINEEI RESFEHAGGE
301 RFTYIPCLND EDAHIAALAG VVASNLGGWL D
SEQDB ID: 3101377CHA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCCHCDGGAC VLQDDVFLSV RRIVGEVMDI DPADLTGDTR FSDLPLEYEE DFHDIYERCC
61 QALNVPLPAI LNTMPVYRQR IGEQMMNGWR LLAPFFARAD RLLAEHDVRM ECETLDSLAE
121 TMRQGRYVSS GQFWPRANPP RSKRYVLGWL AGLMGATVAV PYALTFLPCR LICIYWGFST
181 FTQMQNMLPV AFAIFLFVLV VTIAPGVYGL YLNPKAPFRQ RRQVAARHRP D
SEQDB ID: 3101377CHB
Reference:
3101377
Name: ribosome recycling factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: frr
Sequence:
1 MSDDFELDTD DLKRRMDGAM ANLKTEFASL RTGRASGSML EPIQVEAYGQ MTPINQIGTV
61 NVPEPRMVTI NVWDKSMVGK VEKAIRESGL GINPQLNGTI IMLPIPELNE ERRRELTKVA
121 GQYAEHARVA IRNVRRDGMD QIKKAKADGI SEDDQKFWEA EVQELTDKMI KVVDAALETK
181 QAEIMQV
SEQDB ID: 3101377CHC
Reference:
3101377
Name: undecaprenyl diphosphate synthase, Class: EC2.5.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uppS
Sequence:
1 MAKDPVSAPG SGPRHVAIIM DGNGRWAQAR GRPRLFGHHA GARRVREVVE ACPQLGIKYL
61 TIFAFSTENW KRTQVEVAGL MSLFRRYIAK ETRALHARGV RVRFIGDRVR LDAKLIALMD
121 TLEEQTREND GVQLTIALNY GGRDEVARAT RRLARDVAEG RLKPEDVDEE TLPRYLDTRV
181 LPDPDLVIRT SGEARISNFL LWQSAYSEYE FIDTLWPDFT AEELARLCQS YGSRDRRFGA
241 VTV
SEQDB ID: 3101377CHD
Reference:
3101377
Name: phosphatidate cytidylyltransferase, Class: EC2.7.7.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cdsA
Sequence:
1 MSGGRWSDLT ARLGSAVVLA AVAGVELWLG GLWFESFIAI VTGLMVWELM RMIAPERRGA
61 AVQMALLTGF AVLLAYHLPP LYRLPVLMAP ALVGAGQVDR HKGIYAIFAL WIAFAGLGFI
121 WIREVMGLDW MLWLVLVVVA TDVAGYFVGK LIGGPKFWPR VSPKKTWSGT AGGWIAAALV
181 GAGFALQAGL GASLLILSVL ASMASQAGDI AESALKRKMG VKDSSNLIPG HGGFLDRFDG
241 MMGAAVFVLL AGLLRAFGGL
SEQDB ID: 3101377CHE
Reference:
3101377
Name: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, Class: EC1.1.1.267
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dxr
Sequence:
1 MGATALRKVS IFGATGSIGQ NTIDLIARDP DAYDVVALSG GANIAQLAAD ARRLRADVAV
61 TAFPERLHDL RAALAGSGVE AAAGPAALVE AGARPADWVM SAIVGAAGLA PGLAALKQGA
121 TLALANKETL VCAGALVLET ARRHGARLLP VDSEHSAVFQ ALVGEDMEAV ERIVITASGG
181 AFRDWPLERL ASATAEQAAQ HPNWDMGQRI TIDSASMFNK ALEVIETREF FGIDPDRIEV
241 IVHPESMVHA LVGFRDGALM AHLGAPDMRH AIGYALHWPE RRDLPVARLD LAALGQLNFR
301 APDDARYPAL RLARWVMARG GLSGAVFNAA KERALDHFIA GRIGFLDMAG LVEAVLDRFE
361 ADPGLIDAPM TLDTVTQTDH LARQRVDAAM AKRAG
SEQDB ID: 3101377CHF
Reference:
3101377
Name: membrane-associated Zn metalloprotease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVIGLIPQF GNLLYTIAAF VVALSVIVAV HEYGHYIVGR WSGIHAEVFS IGFGPVLWSR
61 VDRRGTRWQI ALLPFGGYVK FLGDANAASG KDGDSMAEIY RRNPDDLRRT MHGAPLWARA
121 ATVAAGPLFN FVMSILVFAA IFMTRGAPIE PLTVAEIHHL PGIETGLRPG DTILSVGGVP
181 LPGSEFASDA EEGAAWRSFE SALPLAPQLD YSVMRDGSEV TVSGPQLYPA LVGAVVPRSA
241 AQDAGLQPGD VIRAIDGEEI AAFRQLKDMV EGSDGKPLVL DVWREGEMLQ LLLVPRRTDS
301 PKPEGGYETN WRIGVASGQA FEPATETPGP LAALATGVSR TGDIVSSSLS GLWHMIAGQI
361 STCNISGPVG IAQASGAVAS QGAQSFIAFI AVLSTAVGLL NLFPIPALDG GHLVFYAYEA
421 VAGKPPSDNV LRVLMALGIT LILSLMLFSL SNDLFC
SEQDB ID: 3101377CHG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVLQHSYRG LGLVMQLNWD RILFVGAIAA ALFLGAFLGS L
SEQDB ID: 3101377CHH
Reference:
3101377
Name: outer membrane protein, Isotype: OMP85 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHNGRGAGTY CGVGVSSRHM LLNSVSAIFL ATAMTFAALP QDAQAQDYRF NTVQVDGNQR
61 IETSTIISRM GIERGKTISA GALNDAYQRL LDSGVFETVE LIPRGNTLVV KVVEHPTINR
121 INFEGNRRVK DETLEGAIGS QSRRVFTPEQ AERDAATIAE IYSTQGRVAA TVVPRIIRRS
181 DNRVDLVFEI SEGDTIEIER VSFVGNRVFS DRRLRRILET KQAGFLRTFI RSDTFIADRI
241 EFDKQVLRDF YLSRGHVDFR VNSANVEFTR ERDAFFLVMD VTEGQQFSFG KITTVSEIPG
301 VEAPAYQDVL KIKPGVVYSP SLVENSIARM ERLGLKNGVD FLRVEPRITR NDRDLTLDIE
361 FALVKGPRIF VERIDIEGNT TTLDQVIRRQ FRTVEGDPFN PREIRESAER IRALGFFGDA
421 NVETREGSTP AQVIVDVDVE EKPTGSLSFG GSYSVSDGFG VAIGLTEDNW LGRGQRLGLT
481 LSTAQDAEQY VLSFTEPQLL GRDLRFDIDL GVANTNSSFA SYDTERAFFA PGITFRLGEL
541 STLQLRYRWE ASEMVQRTAT TVSGAVIASE IAQGKKSSSA LGLTYTYDSR IGGLNPNAGV
601 LFEVGVDAAG LGGDNEYFKT SAKAIAQTRV WHEEITLRAS LDVGAFTWQG SGFSRAIDRF
661 VIGPNTFRGF EPAGVGPRDQ SNGVDDAIGG NYYAVARFEA EFPLGLPEEL GLRGGLFYDV
721 GNVWDVSDVN TAGGTIVGAD GSFRHVIGFS LLWTTAFGPL RFNFSKALKK ETFDKEQSFD
781 LTIQARF
SEQDB ID: 3101377CHJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPWCSGRTV RGLMGALLLF LALPSLAAAQ QLGLPRHEVL TISGEILFVK SAYGRRIIDE
61 IEAEGALLAA ENERIVAELS REEQELTQRR TELEPQAFRV LAEAFDRKVQ AHRENQAAKR
121 QTLEARGEEA RATFVDLARP ILAALMRDTG ASVILERSTV FLSLDTTDIT AIAISRIDAA
181 IGDGSALRRD
SEQDB ID: 3101377CHK
Reference:
3101377
Name: beta-hydroxyacyl-acyl carrier protein dehydratase, Isotype: FabZ, Class: EC4.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabZ
Sequence:
1 MTTETKSADI QLIQRILPHR YPFLLVDKVV EIDGYSSAVG IKNVTMNEPH FQGHFPGTPI
61 MPGVTIVEAM AQTAGVMLGV GMDIIDSELL IYFMNIDNCK FRRKVVPGDV MKMHVETLRG
121 KMGGKIFKFR GTATVEGEVA AQAEFSAYVD LTGEKST
SEQDB ID: 3101377CHL
Reference:
3101377
Name: acyl-acyl carrier protein-UDP-GlcNAc O-acyltransferase, Class: EC2.3.1.129
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpxA
Sequence:
1 MSQIHPSAII EEGAQIGADC VIGPFCIVGP KVVLGDRVEL KSHVVVTGDT TVGEDTVIFS
61 FAVIGEIPQD KKFGGEETRV VIGARNRIRE HVTVNAGTAG GGGTTRIGND CLLMAGCHVA
121 HDCQLGDRVI MVNHAGAAGH CVVEDDVIIG GISGLHQWVR VGRGAIIGAL TMVPNDVIPY
181 GLVQAPRGEL DGLNLIGLKR RGVARSDITQ LRAAFQMLAQ GEGTFQDRAR RMGEEFDSDY
241 VREIAEFILG DTDRSFLTPG K
SEQDB ID: 3101377CHM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLALIAGTGA LPEELVARLS EPPLVCAMEG FAPERLAVDI PFPIEHLGSL VADLKARGVS
61 EICLAGAVGR PAVDPARIDA ATLPLVPVIQ QALTSGDDGA LRAVMGIFEN AGLTVRAAHE
121 IAPDLLMPAG CPTKAQPEPA ELADARRGAE IVAAMSAADI GQACVVHRGQ ALAVESVFGT
181 NWMLGSLGQR PDAGGGVLFK APKPDQDRRA DLPTIGPDTV TAAVVAGLSG LVIAAGGVIV
241 LERDRVIAEC DRLGLFLFVA GPDA
SEQDB ID: 3101377CHN
Reference:
3101377
Name: lipid A disaccharide synthase, Class: EC2.4.1.182
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpxB
Sequence:
1 MRPAGPVPVC CRAGRLMRVF ILAGEPSGDR LGGALMAGLR QLCPDVQFDG VGGPAMESEG
61 LSSRFPMAEL SIMGLVEVLP KYFHLKRRIA ETAQAVLAMR PDVMITIDSP DFSLRVARLV
121 KDASDIRTVH YVAPSVWAWR PGRADKMAKV IDHVLALLPF EPPYMERAGM ECDFVGHPVV
181 TEPEATGADI AALRTELGLG AAPVLLALPG SRRGEVERLA PVFGAALRRF LPEHPDMRVV
241 VPVVPHVADQ VAQQVAEWPG APVLVDPRGL APAQAAMRKR AAFAAADLAL AASGTVSLEL
301 AAAGTPMVIA YKVNWLTQKI AERMVTIDTV TLVNLVSETR VVPECLGPAC TPENIAARLA
361 AVHADPAAQD AAMRLTMERL GRGGTPPGLR AAQAVLDRLP G
SEQDB ID: 3101377CHP
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIESLQTAR LTLCPMRAEH APALHAVFGD PEAMRFFGET HTDLAQTERW VAGTLAAPPE
61 RCREYVLLED GEAIGKAGLW DVPELGFFLR RDRWGQGLMR EALRALIPHL FATLPLDHIR
121 ADVDPRNAAS LALLHQLGFV ETHRASRTIQ IAGEWADSVY LELERSNVGG
SEQDB ID: 3101377CHQ
Reference:
3101377
Name: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, Class: EC2.1.1.61
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trmU
Sequence:
1 MPLNSLGFAK PPSETRVVVA MSGGVDSSVV AAYLADQGYD VVGVTLQLYD HGAALAKKGA
61 CCAGIDIHDA RRVAEERGFP HYVLDYENIF KDAVIDEFAD SYLAGATPVP CIRCNERVKF
121 KDLLETARDL EADCMATGHY IQRKMGPNGP ELHCAEDANR DQSYFLFSTT PEQLDYLRFP
181 LGHLPSKDAT REMAAQYGLA VADKPDSQDI CFVPNGNYAS VIEKLRPGAA EPGEIVHADG
241 RVLGSHEGVI HYTIGQRRGL GIGGLSEPLY VVRLDVDRKQ VVVGPKELLA TRTIPVREIN
301 WLGDAPFTSR PEWHLSVKVR STRPPREAIV RPISETEAEV ELLTPEEGVS PGQACVFYES
361 DGSRIFGGGW IWRGY
SEQDB ID: 3101377CHR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMFLRKVEGP RSVTLPDGSI MTRADLPPAN TRRWVASRKI AVVRGVIYGL ITLAEAKQIY
61 GLSDEEFNSW VSALAEHGKD ALKVTALKKY RQL
SEQDB ID: 3101377CHT
Reference:
3101377
Name: DNA-binding response regulator, Isotype: CtrA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ctrA
Sequence:
1 MRILLVEDDP TTSKSIELML THANLNVYAT DLGEEGIDLA KLYDYDLILL DINLPDMNGH
61 EVLRQLRMSR IETPILILSG VDDTESKIKG FGFGADDYLT KPFHREELVA RIHAIIRRSK
121 GHSQSVIRTG KISVNLDAKT VEVEGQPVHL TGKEYQMLEL LSLRKGTTLT KEMFLNHLYG
181 GMDEPELKII DVFICKLRKK LSNATGGENY IETVWGRGYV LRDPQADGLP DPRIAVNA
SEQDB ID: 3101377CHU
Reference:
3101377
Name: NAD-dependent DNA ligase, Class: EC6.5.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ligA
Sequence:
1 MTEAEAAQEL ARLAGLLAQA NLAYHTLDAP EISDADYDAL KQRNAEIEAR FPHLKRPDSP
61 SEQVGARPGE GFSKVSHAVR MMSLGNAFDD ADVADFDRSI RKYLGLDVET ALAYTAEPKI
121 DGLSLSLRYE QGVLVQAATR GDGEVGENVT ANARTIADIP ARIEGAPEVL EVRGEVYMSH
181 ADFAALNTRQ EAEGGKLFAN PRNAAAGSLR QLDAAITRAR PLRFFAYSWG ELSEPLAETQ
241 MQAIERLAGL GFQTNPLTRR CADLDAMIAH YRDIEAQRAT LGYDIDGVVY KLDDLGLQAR
301 LGFRSTTPRW AIAHKFPAEL AWTRLEAIDI QVGRTGALSP VARLTPVTVG GVVVSNATLH
361 NEDYIAGRDS RGQEIRDGKD IRVGDWVQVY RAGDVIPKIA DVDLNKRPEG ANPFEFPEQC
421 PECGSPAIRE EGDAVRRCTG GVICPAQAVE KLKHFVSRAA FDIEGLGAKQ VEQFHADGWI
481 REPADIFELR SRYGEGLQQL KNREGWGEKS ATNLFQAIDD KRRIPLARLI FALGIRHVGE
541 VGAKDLSLHY RDWDAMAAAL DTARLAALAH RAADTAEEQE RQQAQAEGRR ARISDTRAAV
601 IAAQEVPPEA AAAWADLIGV DGIGATLGLS LSDAFANGDE RAAFDRLSAH LTVIPPDAPA
661 RDSPVAGKTV VFTGSLEKMT RAEAKARAEA LGAKVAGSVS KKTDLLVAGP GAGSKLKTAE
721 SLGIETLDED GWLKLIEGL
SEQDB ID: 3101377CHV
Reference:
3101377
Name: ATP-dependent DNA helicase, Isotype: RecG, Class: EC3.6.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recG
Sequence:
1 MSGRPEQLFP LFAGLETLEG VGPKTAQLFA HLDVETPRDL LFSLPYSVVD RRRRDTIRGA
61 DLPATLTVEV TVGAHRPARG RGGAYRIFVE DAQADFQLVF FHARGDYLKK VLPEGSRRVV
121 SGKVELFDGM ANMVHPDHIL PVAEAGEIPE FEPVYPLTQG VSQRTAFKAA RSALARLPDL
181 ADWIDPALRA REGWPDWADA MRAAHAPQGL DDVAATAPAR MRLAYDELFA HQLTLALARR
241 RERKARGISS VATGALQSRV LASLPYRPTN AQARAIEEIA ADMAAPARMN RLLQGDVGAG
301 KTLVAFMALL VAVEAGGQGV MMAPTEILAR QHLEGLRPLA EEAGVVLELL TGRDKGAERR
361 AKLAALKKGD ISILVGTHAV FQADVEFADL RLAIVDEQHR FGVRQRMELA EKGMNADVLV
421 MTATPIPRSL ALAQYGDMDV SVLDEKPPGR KPIRTAVIST ERMDEVIDHL RRAIAEGRQC
481 YWVCPLVDES EVSDLTAAED RFKRLRAVLG EGVVGLVHGQ MPPAEKDAAM AAFQTGETQV
541 LVATTVIEVG VNVPNATIMV IERAEIFGLA QLHQLRGRVG RGEAASTCLL MYQPPLTEGG
601 RRRLEVLRET EDGFRIAETD LDMRGAGDLI GTAQSGLPKF RIADLERHTA LMATAQTDAR
661 ALLAQDPELS SERGRAARIL LWLMKQDQAI RLISVG
SEQDB ID: 3101377CHW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTQIKTVLS RSQHTLLQDA AGAASLVVML VAALLLPGTF
SEQDB ID: 3101377CHX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGETDLIKL YSGRILALAA DIPHLGRLDS PDATVKKRSP LCGSTVTVDV TLRDGRIDQF
61 GQDVKACALG QAAAAVVGAA VIGTTRAQIE AARDQLKAML KQDGPVPDAP FDGLEVLIPA
121 RDYKNRHASI LLTLEATAEA LEQAERANCA
SEQDB ID: 3101377CHY
Reference:
3101377
Name: phosphoribosyl-AMP cyclohydrolase, Class: EC3.5.4.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisI
Sequence:
1 MPFDPSTLKY DAAGLIPAIA QDAATGEVLM MAWMNAQAVA RTLESGRVTY WSRSRQSFWV
61 KGESSGHVQE LVDFRVDCDR DCLLVTVRQT GPACHTNRRS CFYTAVREGE EVELMAPLL
SEQDB ID: 3101377CJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKLVLAAAL TAAASTAFAG NLSEPVVEAP VIVEETQSSS SGILLPLILL VLVGAAVAAN
61 N
SEQDB ID: 3101377CJA
Reference:
3101377
Name: tRNA synthetase, Isotype: class I family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFTTRFAPS PTGPLHLGHA YSAILAHDMA RAAEGRFLLR MEDTDLQRSK PEWDAQIIDD
61 LTWLGLSWDA PVLRQSEKLD DYAFALRHFA ELDLLYPCSC SRSQIQAALA APQEGVTHEV
121 YPGLCKHRPM TSRQDGDALR LHLDRALALF DGTYPQFTES GPCHAGTHRI DPEQAMAQIG
181 DVVLSRKGED IVAYFLASAL DDVAQGITHV IRGEDLFDFT AIQVILLALL DLPIPIYHHH
241 PLIRDETGKR LAKRDDARAI AKYRAEGASP ADIRAMVGL
SEQDB ID: 3101377CJB
Reference:
3101377
Name: gid protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gid
Sequence:
1 MTDRLHIVGG GMAGSEAAWQ AAQQGIDVVI HEMRPTVGTF AHQTGNLAEM VCSNSFRSDD
61 DEQNAVGLLH WEMRAAGGLI MSAADAHRLP AGGALAVDRD PFAETVTARL HAHPRVSVTA
121 EEVTELPRDG HWIFATGPLT SPALGAAIQA ETGAEALAFF DAIAPIVYAD TIDMSRAWMQ
181 SRYDKGETEE ERTAYLNCPM DRDQYEAFID ALLAADKTEF HEGETATYFD GCLPIEVMAE
241 RGRETLRHGP MKPVGLTNPH QPDVKAYAVV QLRRDNALGT LYNIVGFQTK MKYGAQTAVF
301 KTIPGLENAS FARLGGIHRN TFLNSPTLLD AQMRMKSRPN IRFAGQITGV EGYVESAAMG
361 LLAGRLAAAE IQGRALPEVP QDSAMGALIH HITGGAEAKT FQPMNVNFGL FRPVDGLKGG
421 RRGRKDRYKA YTDRAKEAWT SWLAEAENG
SEQDB ID: 3101377CJC
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAILERRDTG AVAHLTMNAP ERLNALSDEM LAALQAEFDA LRDDAGIRAV ILSGAGKAFC
61 AGHDLKQMTA GRQAEDGGKA YFKDLFDRCA RMMMTIQSLP QPVIAQAHGI ATAAGCQLVA
121 TCDMAVAAEG TRFGVNGVNI GLFCSTPMVA LSRNIPRKQA FEMLTTGQFI EASRAAELGL
181 VNRVVPAADL ESETRALAET VAGKLGAAVR IGKEAFYRQQ LLPLDQAYAY TGDVMVENML
241 YRDTAEGIAA FIEKRDPDWR Q
SEQDB ID: 3101377CJD
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALALNREEL SQYLAEVFPQ VREDFAIDAL SEDTITMRLL TAERHLRPGG TVSGPSMFAL
61 ADVCVYAMVL ARLGRQALAV TTNCSMDFMR KPEGGAQIVA ECRLLKLGRS LAVGDILMFS
121 EGSDKPVARA SMTYSIPPQG SAAAQFG
SEQDB ID: 3101377CJE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRMMHSPAL MLLNASPRLP LIAALAVRFA ATVTKWEQNR RTRLNLGKLD DHLLRDVGLT
61 RQAARDEAAR RFWQG
SEQDB ID: 3101377CJF
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTIWPDSLP QSKGAKYTLV ADVIRKAIDT KELEVGVKLP PVRELAYKLG ITPGTVARAY
61 TILTDEGLLN AEVGRGTFVA PPKRPVLDDV WSRQLYLLDE RDDDNVSLFS PRLADMGQVA
121 LIRECLQKVA QGDPAMFLNY PTRDAYAGVR QAVVDWMSDL SLGPLTADDI VLTHGGQSGL
181 CVVFQTVFKG PKPVVLVEDL SYAGFRRAAE LMRADVIGVR MDKWGIDPMS LDLTARQSPA
241 QAICVSPEVQ NPTGSRSPLE RRKEVVEVAR KHDLQIIEDD CYRMGEPQAP SYRALAPERG
301 WHVSSVSKTL TPALRVGFAI APEGQSAGLR RSAEYGYFGL AQPLAELTRL MLSDPRARDL
361 ARAVQRRMAE YVRVTVNTLG GFDLVWDSAV PFVWLRLPSG WRSAAFTRAA ERAGVQVRSA
421 DEFALRDGRA PNAVRIAMNA HVSLERFETA MVRLRALLDN PPEQISV
SEQDB ID: 3101377CJG
Reference:
3101377
Name: ribosomal protein L13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplM
Sequence:
1 MKTFSATPAD IDKKWILIDA EGVVLGRLAS IVAMRLRGKH KASFTPHMDM GDNVIVINAD
61 KVQITGKKRE EHFYWHTGHP GGIKSRTKQQ ILEGAHPERV VYQAVKRMLP GNRLSRQQMT
121 NLRIYAGTEH PHEAQAPEVL DVKSMNKKNT RS
SEQDB ID: 3101377CJH
Reference:
3101377
Name: ribosomal protein S9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rspI
Sequence:
1 MADQINTLEE LSAVAGLESL AADEPREPVR DELGRSYATG KRKDAVARVW IKPGSGKVVV
61 NGKDQDAYFA RPVLQLILRQ PFQVAGVEGQ FDVMATVKGG GLTGQAGAVK HGISKALQLY
121 DPSLRGALKA AGFLTRDSRV VERKKYGKRK ARRSFQFSKR
SEQDB ID: 3101377CJJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRISYGVENL RSLTRTPEIE LRPITILIGR NSAGKSTYLR SFALMRQSLE VKSSAPILWY
61 GDYVDFGDFD AAVSNGDKDS DITFNFRVED LDTRDVEDEI YYYNEYAYRS SRRKISYQAV
121 SLSISLGEQL RRTVRRRIAL EIPEDRISAV ASFEKDGREC SDFQINGQRL SDLIPNVAVY
181 FRASDIFDRP VLVRQVRKDG KSLRRVVGAA SEIGSAISQR LRQQVDKRIS EENLAIEARR
241 ILNHPRLDPT SLQQLRLRAG NRSFRKLYDR WLKDEASTTL AEIDHLCALN HALITVGRVS
301 SVLKGFFRNT TYLGPARARS ERYYRSQELE VSEISPDGQN LPMFLASLST TEQGRFSDWV
361 EEAFGFGVLV ERKEGHVSIK LRQRTISVNV ADTGYGVSQI LPVLAQIWWA TQIPRNYTRQ
421 MRHGLRPITM EQPELHLHPA HQAKLADVFQ SAIERSNASG PEAVLLIETH SEALINRLGE
481 LIEYGKIAAN DVQVVIFSAR GEGEELNTEI STSTFDDNGA LRDWPYGFFN Y
SEQDB ID: 3101377CJK
Reference:
3101377
Name: carbohydrate kinase, Isotype: pfkB family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNALIEELKR LLKECATKKI VVIGECVRDV FVNTQRLSGP SDYQYTITKQ LQRREFPGGA
61 YPVARDLSNF VSKVHFVTCS THEFPTNLER MDVIPISRER ISKTRFFSGH NSNIFHYHCV
121 FSEEITLSLT PLQELASVFS EADLVIVLDY GHGLLNSDVR KSISQNARFV ALNCQANEDK
181 YPFHQIWKYE STDLLLLNKV EAEINLLKTG VPVQELALRL HSKFKSTYTI VTDAEHGAVI
241 QHDYRAYSSP AMSSCVVDAV GCSDIMLGFA ALAAQNGKSA EEILYFASVA AGAKTMINVH
301 ERPLSREDLY EIALGVQNET
SEQDB ID: 3101377CJL
Reference:
3101377
Name: hydantoin utilization protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHNTNGLRLA VDIGGTFTDT VLVDGQRHIL ATTKTPTTPE NPTLGALAGA QHVLAETGTG
61 WSQIRGFIHG TTLATNALIE RRGAVVATVT SAGFRDILEI AYERRYSQYD INLVKPDLIV
121 PRARAFTIGG RMDARGHALQ PLDEKAVARL AAEIGGSGAA AVAICLMHAY ANPAHELRLR
181 DLLLEAMPGL VISLSHEVSP EAREFDRLST TIANAYIQPQ MAGYLSDFQA RFSNEGLTCP
241 ILMMTAGGGM TAMETAARLP VRLVESGPAG GAILAARIAA ETGERAVLSF DMGGTTAKLC
301 LIDQYRPQTA RKFEIARAAR FIKGSGMPVR IPVIEMIEIG AGGGSIAHVD RLGRIQVGPE
361 SAGSEPGPAA FAKGGTEPTV TDADVVQGLI EPGRFAEGRL GIDEEAAEAA LVSGVGQALE
421 VDAAEAAHGV SEIVDENMAA AGRMHAVESG KDLGARLMIA FGGNGPLHAT RVARRAHVNR
481 ILIPRDPGVG SAVGFLFAPV SFEIIRSRYS TLEALDLDGH NAFFDAMIEE AQAVVRAGAP
541 QGRLTGRRQA FMRYHGQGHE IEIPLPDRAL EEADIPALRR VFEEEYSRQF SRAVPGMTIE
601 VLNWALEISS EPPALARHQE PRQKRLAQPT GQRRILCDVT GTWREADIHD RDTLRPGDHL
661 NGPALIIEPQ TTTFVSADFS ASVDGGGNIW LIRNREGDR
SEQDB ID: 3101377CJM
Reference:
3101377
Name: hydantoinase/oxoprolinase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTTDTRLQV MWNRLLAVVE EQGQALIRAA FSPIVRECGD ISAGIFDLQG RMLAQAVTGT
61 PGHINTMAEA VKTLRGRFEL QDMKPGDIYM TNDPWIASGH LNDFLLMMPV FYRDRIVGFT
121 SCTSHLVDLG GLGMGPEGSD IYDEGLLIPP CKLVDGGALN TLLMEIVKAN SREPIANEGD
181 IYALIACCEA GAERLTGMMA EFGIDHLDEL ADYIIDTSYR GTIEAIAELP KGTWCNVLKV
241 DGYEQEIDLH AALTIAEDRV ALDFTGTSGL SNKGINVPLN YATAYSVFAL RCIIGPDIPN
301 NAGSLAPFHV TGPKNCILNA QPPAPVAMRH TLGQMTPDLV YGCLSHALPD RVPAEGASCM
361 YDLPLRHTPE AVSRGDEQFA LELVFSGGTG ARPGLDGLSA TAFPSGVWGS QVETTEAVAP
421 VLITRRELRP DSGGPGRTRG GLGQVIEMRS SDNADFMLFL SVERVLNPAN GRFGGQAAAP
481 GRIRIGRDGP DLPGKGEVRV KAGETLIFET PGGGGFGPPR ERDPDDIRRD LDEGLISRQA
541 AHDIYGLEP
SEQDB ID: 3101377CJN
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRPARHIAA MSPYALAQLK APAGKRLISL SQNESLRPPS RRAIEAAARA GDAGHLYPDP
61 DWSALRAALS GLHGIPVEGI LCGNGSMELI ACLAQAFADE RNAILAPAHG YPFFRSAAQM
121 ARARFDLAAE RDRHVCVDAM LAAVQPDTRI VFVANPGNPT GTRIPRHELV RLREGLPDDT
181 LLVIDEAYGE FADHLGEAMF DLVGRCDTVV LRTFSKAYGL AGMRVGWGLF PPEIARELRK
241 VMNPNNIAVA GQLAATAALA DQDYMVETCR QTAALRDGLR ARLSKAGYDV PESFSNFVLI
301 RMESPDDARR ADEALRAEGV FLRPQGGVGL ADSLRVTIGP AEKIDIAAGL LERWAEGKKT
SEQDB ID: 3101377CJP
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPALVFSCRL PTPISNLIWP FWPPMACRCI SPVWGAMIRT RSRMPTRCTG WARPIWMSRC
61 ACCRACAPDV ILYGCTSAML THGPVFDRGL AERIKADSGA ETVTAAGALV HALQTLGVTR
121 IGFASPYVPA INDMAVAFLA ASGFDTVARS EVGDELDNYG QGALDPQAVL ELGLAADHPE
181 AEAIVLSCTD MRSVESIARL EQAVGKPVIT SNQAMVFQAM QLAGIGEALP GYGQLLERER
241 L
SEQDB ID: 3101377CJQ
Reference:
3101377
Name: MmgE/PrpD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFDRIASFS LATNDMPQSA LDMGATLLID TVEVAAGAAS MEAGRIARDH AFAFHVAGAP
61 EHAAHMMFDG RRASIPGAAF ATATQIDNLD AHDGYNPPKG HNGCAVVHAL FAFAQARPGL
121 SARQALSALV MSYEVAARAA QALHATVSDY HTSGAWNALG VAALDSRLMG AGPDQLRQAL
181 GIAEYHGPGS QMMREIANPT MLHDGSGMGA LVGSMAALLA MDGFAGAPAI TVEADAAEEF
241 WSDLGDVWTI ERNHIKPYPI CRWALAALDA LSGLIREHGF AADDVTMIEV NTFAEAAALF
301 PDMPATTSQA QYSLPFALAA LLVHGRIGPG DISGAALSDP KVAEVLSRVA VREDALYSKR
361 FHAGRWSDVS VMLKDGTRLA SGDVQARGGP EAPMKRSEVE VKFRVMAAEL PEPRGTALWQ
421 MRERLLQPEA KFSELAALVH ASAEETHV
SEQDB ID: 3101377CJR
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTPRIILH NSDTAPLTHW LRAAFPQADF RECNSYEALP ALIEGYRPEV VYSVRFAGTP
61 GFPRDALFGP GGPRWIANGG AGTDHYGQWD PGQTTVTNTA GVAAEMMAEY ILGGFLHFSL
121 DVPGLQKDKA ARVWNARTVR PLAGKTLLII GLGHTGRAVA ARSKAFGMKV LGTRARPKPM
181 ENVDEVHAAD DLHDLLPHAD FIAVSTPLIP ATRGLIGAQE IAAMKSGVIF ADVSRGGVVD
241 QTALYDALSV GHVAAAALDV FETEPLPEIS PLWALENVII SPHCSSVFAE WEEASFELFL
301 QNLGRWMRGE GLVNIVDPAR GY
SEQDB ID: 3101377CJT
Reference:
3101377
Name: dihydrodipicolinate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKARLTGVVT PLLTPYEDDL SIAAGLFLDH AAYCLEGGAH YLSPFGTTGE AISNTMSERI
61 AMLERLVASD TALPEQLMPG TGLCNLEDTV TLTRHASDLG CAAAMVLPPF FYPPNDDGLY
121 RYFAQLIETL GDKAPRIILY NIPQNTGVPI SPALSARLNQ AYPDHVVAYK DSSGDWDNTA
181 AVIEAAPGLS VFPASETLLA RAMALGAGGC ISASCNSNIT AIRAMYDAVR EGDHSGADML
241 QPGLETHRKA AQEEGLISGL KSLVAHRSND QRWLNLRPPQ MNADPAAGAR LATTLPH
SEQDB ID: 3101377CJU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQDQPGPAT TPRTRAKARH ILDNYFIGPA RDDEVLEIWG NTPEMSYAPG DRVALHVSTT
61 ADEWEFEIGR DGLEYVPLLT KSGLPGEHHP TPLDCSVKGC GWPEAYALTI PDDWAPGGYL
121 VTFRARKGDD RIEEHHVILI RTAPDAARPP YVLVCATGTW LAYNCWGGSN HYEGITGPDG
181 NAFSPVVSTQ RPWTRGFCKL PEGAPRALRQ QPTRPGEMVR YPYMEWAYAY GYSKKYASAG
241 WASYERHFAR WAEGEGYDFD VIALHDLHHD PDLLKRYACA VFVGHDEYWS AQMRDAVDAY
301 VEGGGNVARF AGNFLWQTRV EDEGHTQVCY KYVADRDPLM GTEQEHLVSG AFEVAPVNRP
361 GALTFGVNAL RGVYAGLGNC VGGGAGGYTI YRSDHWAFDG AGLGYGDVLG ARSRIFGYEV
421 DGLDYRFEDG LPFPTCSDEA VPEIEILAMG LATNIEADHG IWGETLYIGS ADARFKAQVL
481 FGEVTPETLD ACKRGNGMII SWPRGKGEIF TAATCEWVAG LIRQDVQVEQ ITRNVLNRFA
541 KSKGRSR
SEQDB ID: 3101377CJV
Reference:
3101377
Name: CaiB/BaiF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQNRPLSHIR VLDFGHYLAG PLVGMMLADL GAEVVRIDPP AGPRWKDPAF DMLSRGKRAL
61 TLDLKTADGR DTALDLVRRA DVVIENFRPG VMERLGLGPD ALRQANADIV SLSLPGFAST
121 DPEFAGWAAW EAVIAARTGQ FTDMGLNRRL MGINPSFTPL GLASAYGAAF GTMSVLFALG
181 ARSRMGGDHI EVPLASALLE GLIYNCEQIE DYPDRYKSPR ELELERRAGE GLPNNLSFAE
241 LSEFLDPFYR TYTCADGRGF YIVSCSIVNH PQRVLEVLGL GELLKELPDF DVYVDQADWP
301 GEWALRSYPV GADDRKRLSD AMKAAFLTRP AHEWEELFGV AKAPATAQRS TAEWLVDPHA
361 LASGLVVALD DPRHGQMRQM GNVAWLTDDP GAMKKVAGPE QDDFRDALSG VLAEPPRRPT
421 GGDSKGVWLD GLKVLDLTNV IAGPTIGSTL ARFGAQVTLV QPVRPSVDPW NAVVFGLHAQ
481 RGKESVLLDL RSEQGQEALW RLVAEADVIT MNGTDQQRDA LGLTEARLNE VNPRLILVQL
541 DAWGGPRRGP KSDHLGYDDL AQAATGVMTR FGGGPETPEE HAHFGTIDAL TGHCACVALG
601 AALERLRVTG KGGVARASLA AAGEMIQAQF MYDFDGRPAF DEPSGREVRG WGSFYRCYAA
661 ADGWMFFAAP TERDAALQRV PDLSDLVGKD DADLEDLLAE RFAQKRVADW MRAFAGGSVG
721 ITPLGSLHGT RDAGLQRESE GEIDISKATF RAVRHDRHPM GRWVDLVAPN AVRPEKTRIT
781 IPGPAPKYGQ HTREVLAGVG YADDEIGRMI ESGAAAQSWS DKYLPE
SEQDB ID: 3101377CJW
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSIRVSVLL CDAFSNMVLA CLLEPLRVVR DQTGADVRWN ILTEGDRAVS SSSGLSVSPE
61 MLISDTLEPD LVIIIGGDAF RNTKGVTSAR SLGRLMQGAT VIAADTGAWI LAQGGFLNAR
121 KATLHWQLLE EFAEEFPKVE VLPDRHVQDG RFWTCGSAAA ALDLMLLFIR ERFGASVAFD
181 AGAMFLHDNA RRHGASYPDQ ALSQAVSPKL KRVVVLMSEA LEKTQPVPSL AEQANISERS
241 LRRLFWTELQ TTPGRYYLLL RLARARELLR YSDISLDQIA LRCGFANATT LTRSLRKNFS
301 SAPLRGR
SEQDB ID: 3101377CJX
Reference:
3101377
Name: phage head morphogenesis domain protein, Isotype: SPP1 gp7 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLNALAPPD TVPTVSTSDL RDVSDANTEA LNAWNARLES IFSEYQNHPQ RLRPLRTAME
61 ERLLRAFAGL INQLRQEDLG IEQYIWRSQD DAKVRDSHAA YDDRVFRWNN PPEGGHPGEA
121 HNCRCYAEPV LPGVQSIVVL ADFAPAAGGV PALDPTDAIR GLRALTGIGA ALLASDALQD
181 WTDAMRDRRV DAAGARLGVD VTTVEGRLAA TAYALVQEGI SSGAYPVLPK NSEFARIGAE
241 AAALYELMNP GTILETGVGG DPAKQRALQE FIAAAGAAFA RGGLRLQEGE MAQGWVEVFP
301 ELTEDERRLG ELPGFTPARI EQWLETYPIE DLGLPNHTGS PIPEDPTDSI ISTPIPEETG
361 PNIVEARPGN TTTPGGNSIL PHGAKGDGRE YIGLKGHDVE QIDDIIANPR PELSGVVEGR
421 GKFKGQDMTL LTGQDGHWVL LDPDGNVFAV SNRNLPLRHQ ENDPEDIVRP LERP
SEQDB ID: 3101377CJY
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKLQDLTLH YGHSQILHGI SMEAALGEIT CVMGTNGVGK TSLIKAISGT HPRSGGEMIL
61 DGEPLGVLPA HQLAHKGVAY VPQGREIFPL LTVRENLETG FGCLPASDRL IPDEIFELFP
121 VLKQMQNRRG GDLSGGQQQQ LAIARALITR PRLLLLDEPT EGIQPNIIQQ IGQVIRHLRS
181 QGTMAIILVE QYFEFAYDLA DRFVVLRRGE VLVAGRKGEL SKADVLKGVS V
SEQDB ID: 3101377CK
Reference:
3101377
Name: ErfK/YbiS/YcfS/YnhG family protein/tat domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFCVKVLLM VKKPTTLSTR RSFLVGAATA LGTPALAQFT PEDPLRPAPE PEAPVRRNTS
61 SFRALDWRPY FSNTRNGAIL VDTVSRALHY WSEDQSVYRL FPSSVPLTDE LTRRGRTSVI
121 RKVVGPSWAP TPSMKKRNPE WPDYIPPGPD NPLGTHALYL SWKYYRIHGT HDTRKIGRRS
181 SNGCIGLYNE HISQLFDLTK VGTQVLLI
SEQDB ID: 3101377CKA
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTLLEVSGV SVTFDGFRAI NNLSFRIGPA EMRAVIGPNG AGKTTFMDIV TGKTRPDEGR
61 VIWGERSVSL LKMSEARIAQ AGIGRKFQKP TVFEDQTVEE NLLMALKKPR SWVSVLSYRP
121 SREDIEKVYG LAQEIGLQDA LKRKSGELSH GQKQWLEIGM LLAQEPRLLL VDEPAAGMTP
181 QEREHTTDLL VEAAKTCAVV VVEHDMEFVR RLNCKVTVLH EGSVLAEGSL DHVTSNQDVI
241 DVYLGR
SEQDB ID: 3101377CKB
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQHSFIAKNP SVLIFLAALA LFTLIVSVLS EGLGTGIIST SFIKTLGKTL CLCLIAVAMD
61 LIWGFAGILS LGHFAFFGLG GYMIGMWLMY ERTRLIVVES LSQSEIPPTE AEVIDAIGNQ
121 IFGVVGSSEF PLIWAFADSL FLQLLLVLLV PGLLALIFGW LAFRSRVTGV YLSILTQAMT
181 LALALYLFQN DSGLRGNNGL SGLQNLPGVD ASQDVVSLWF LWSSALALGL GYVLAAWLVS
241 GKFGSVIRGI RDNEARVRFL GYSVETYKLV IFTLTACIAA IAGALYYPQA GIVNPAEIAP
301 IASIYLAVWV AIGGRGRLYG AVIGTAFVSL LSTWFTGGQA PDVPLGFYTI KWVDWWLVLL
361 GLSFVAVTLL APKGMGGLID LWTDRKPPGR HGADLGPDDG ALREQEANK
SEQDB ID: 3101377CKC
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRFLFAGLA LVLSCLAATA QDAPIQPLLQ EHQAAIAKSS RKTIAPAIDA IAASGLPQAQ
61 IVLETWGAKS MWMRKSDGLF FIGEMVGGDT YRLTDFDTGE VAGEFPRTEL EQLKPNSGIR
121 ALIATALVQF QLNDPDRAKR EDALTSIQRD PEAAHLEPLR ASIESEPDGI LKAQKRRMER
181 LLTISFENDI QTRIDAIDEM SGDLGVDLRA TLNPLVATTR EVAAGQVPED RNVAARLRPG
241 SEVLPRDEAY GLLVAKGYAP AQVTPDDIRS ALAGNITGGM VAGIPVAQLD SDTARSRAYA
301 ALAKAGRVPP ILSDAEIDAA LAAHVFYDSY ADPSKQVTAA ALAALKSIEL KVGVNQALDL
361 TLDALSLASI YFLAAIGLAI TFGVMGVINM AHGEFIMMGA YTGYVVQQLI PDHTISILVA
421 IPLAFAVTFA AGVAMERLVI RWLYARPLET LLATFGISIA LQQLAKNIFG TQARPLTSPE
481 WLDGALVLND VVSISYIRIA IFFLALMFLA VFLYIMKRTR LGLETRAVTQ NPRMAASMGI
541 NPGRVNMLTF GLGSGIAGIA GVAIGLFAKV TSELGSDYIV QSFMTVVVGG VGNIWGTLAG
601 ATMIGFLQKG IEWMNPSNTL AAQTYMIVFI IIFIQFRPRG IIALKGRAAG D
SEQDB ID: 3101377CKD
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPAPMRKRF SAPREETSMN FLKTTLASSV VFAALCNAAM AAEDKIKVGV LHSLSGTMAI
61 SETTLKDTML MLIEQQNAKG GLLGKQLEAV VVDPASDWPL FAEKARELLT VHEVDVIFGN
121 WTSVSRKSVL PVIEELNGLL FYPVQYEGEE SSKNVFYTGA APNQQAIPAT DYFLEELGVE
181 KFALLGTDYV YPRTTNNILE SYLKQKGIAE ADIFVNYTPF GHSDWSKIVA DVVALGADGK
241 KVGVISTING DANIGFYKEL AAAGISADDI PVVAFSVGEE ELAGLDTSNL VGHLAAWNYF
301 QSAESDVNAE FVKSWKATMG EERVTNDPME AHYIGFNMWV NAATEAGSTD VDAVRAKMYG
361 QEFPNLTGGT AVMLPNHHLT KPVLIGEIQA DGQFDIISQT AEVPGDAWTD FLPESAVLMS
421 DWKELGCGMY NTETKTCVQT LSNY
SEQDB ID: 3101377CKE
Reference:
3101377
Name: urease accessory protein, Isotype: UreD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureD
Sequence:
1 MELTTKLVGT CSALDRLYQS GSAKCLFPRN SRAGLEAVLL NTAGGVTGGD RLSFSAQVRA
61 GTRLSVTTQA CERAYRAQPG ETGQVRNHLS VATGARMNWL PQETILYDGS SLDRRLSVEI
121 EPGASLLMVE PLVFGRIEMG ESLNDARFCD RIEITRRGRP IFLDATRLQG GIAAHLAKPF
181 IANGAGAMAL LVYLAENAEA VLPRLRQMLP ECAGASLIGE DLLVMRVLAA DSFLLRQSLL
241 PALRLLNNNE IPRCWTI
SEQDB ID: 3101377CKF
Reference:
3101377
Name: urease, Subunit: gamma, Class: EC3.5.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureA
Sequence:
1 MNLTPREKDK LLIAMAAEVA RKRRARGVKL NHPEAIALIS DAVVEGARDG RSVADLMQAG
61 AEVIRAEDCM EGIAQMILEV QVEATFPDGT KLVTVHNPIR
SEQDB ID: 3101377CKG
Reference:
3101377
Name: urease, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureB
Sequence:
1 MIPGELFPAE GELILNQGRA VTRLMVANTG DRPVQVGSHY HFAETNPALE FDRGAARGMR
61 LDIAAGTAVR FEPGQRREVV LIPIGGARRI YGFNQQVMGE L
SEQDB ID: 3101377CKH
Reference:
3101377
Name: urease, Subunit: alpha, Class: EC3.5.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureC
Sequence:
1 MPATISRADY AAMFGPTTGD RLRLADTDLI IEVERDLTTY GEEVKFGGGK VIRDGMGQAQ
61 TTRAEGAVDT VITNALIVDH SGIYKADVGL KNGRIAKIGK AGNPDTQPGV DIIVGPGTEA
121 IAGEGRILTA GGFDSHIHFI CPQQIEDALH SGLTTMLGGG TGPAHGTLAT TCTPGPWHIG
181 RMLQAADAFP MNLAFAGKGN ASLPAALEEQ VLGGACALKL HEDWGTTPAA IDCCLSVADA
241 MDVQVMIHTD TLNESGFVEN TVAAMKGRTI HAFHTEGAGG GHAPDIIKIC GEEHVLPSST
301 NPTRPFTVNT LEEHLDMLMV CHHLDKSIPE DVAFAESRIR RETIAAEDIL HDMGAFSIIA
361 SDSQAMGRVG EVLIRTWQTA DKMRKQRGRL AEETGDNDNF RVRRYIAKYT INPAIAHGIG
421 HEIGSIEEGK RADLVLWNPA FFGVKPEMVL LGGTIVMAQM GDPNASIPTP QPVYSRPMFG
481 AYGRSVENCA VTFVSAAAHE DGIGARLGLA KETLAVTNTR NIGKSHLILN NATPQIEVNP
541 ETYEVRADGE LLTCQPAEVL PMAQRYFLF
SEQDB ID: 3101377CKJ
Reference:
3101377
Name: urease accessory protein, Isotype: ureE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureE
Sequence:
1 MDLPACRDIR RTGHWSEADD RVTLSYDDRF LRRKRLITVQ DKAFLVDLAH TTSLEHGDAF
61 QLEDGRLIEC IAADEDLLEV TGPDLTRLAW HIGNRHTPCQ IEENRLLIQR DHVIQDMLSQ
121 IGATLREVVE PFTPEGGAYG HGRTHGHAH
SEQDB ID: 3101377CKK
Reference:
3101377
Name: urease accessory protein, Isotype: UreF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureF
Sequence:
1 MATPTEKQIL TLAQWFSPAY PVGAFAYSHG LEWSVEAGDV VDARTAQAWI TDVLQHGAGW
61 NDCLFIGSAY RAASLQELKN INDTALAFSA SSERMMETRL QGEAFCGITA SVWPVDLAGL
121 CYPVAVGRAA NLVGLPLTLS GQFYLHAFMA NLVTAATRLV PLGQTEGQQI IRDLTPLCQA
181 IADTALCANL SHLTSTAFLG DIAAMKHETQ YSRMFRT
SEQDB ID: 3101377CKL
Reference:
3101377
Name: urease accessory protein, Isotype: UreG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ureG
Sequence:
1 MSKMNGPLRV GIGGPVGAGK TTLTAALSEA LRDSHSIGVI TNDIYTREDA EALMRLQILP
61 QDRIIGVETG GCPHTAIRED ASINLAAVAE MERRHPGIEI ILIESGGDNL SATFSPELAD
121 VTLYVIDVAA GEEIPRKGGP AITKSDILII NKTDLAPHVG ASLEVMERDA GRMRCGRPFV
181 FSSLRNRDGV AEIVKLLAEI AGLEIRSDLQ VANLA
SEQDB ID: 3101377CKM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPSEGLLTR LKNTFGIDVY DYRDDLAANK PLHEWSIEAQ ASYFSDVWYQ REFEAENGYS
61 DPNFPSLSTL TEIAPVRLFP QESECFGAEV SIDMWPLDPT LEPGPDGIYD QDEVCAKVWK
121 NPIELIRVGD IVVSFDENDN LVPGPVTRTF QNGAKILLNF HGTHVTPGHV YYRPDSKKSY
181 KYETLIDVLR DDGVIKPQDG TLIRAATNAP VDSPRDGFVR AVTGKRKADG TVVQNDAGRI
241 RLGTRFLVGT GKERRSFAVA DLIEHGGGVV GEDELIRVGD GAPMPFHWEF GDTLPQPEDF
301 VLACSGTTLE DIYKAAEWES QGPRLPAPMV LDRGPVQPLK GTALSAMPRN EPFEVVHSPT
361 ASAKPQRTPN RKQRRAIDAK QNKTANLRKR G
SEQDB ID: 3101377CKN
Reference:
3101377
Name: site-specific recombinase, Isotype: resolvase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKPRPAPAC AKGKLRGKQP DRQSRELRRM YDTGDYSVRD LAEVFSVSRP TIYRTLQRVP
61 GVG
SEQDB ID: 3101377CKP
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVAILFSIF VGGLVLGIPV AITLGLSSLA YLIAAGMPPV VMPQKMYAGM DVFVLLSIPG
61 FILAGNLMNQ GGITGRIIRF ANALVGWIKG GLGLTNIAAS MLFGGITGTA VADAASLGGV
121 LIPGMKKAGY PADFSAAVTA ASSTVGPIIP PSVPMIIVGA LSGISVGKMF LAGAIPGILM
181 GIAMMVTAYI ISVRRGFPHQ PWQGFGEVAR SFAGAIWAIA MTFLIIYGLL SGLATPTETA
241 VVASVYAFIV GAFIYRELPL GKVPGIVANS AVSAAGILAL VGFANVFGWI LVSERIPQAI
301 ADGVLSITDN KFLVILLINL LLLFVGMFME TIAALIILFV PLLSLAQAVG IDPLHFATFA
361 VLNLMIGLTT PPVGVCLFVC ANIARLPLAP VVRAIMPFLL TNILVLLAVS YFPPLATWLP
421 SLLIP
SEQDB ID: 3101377CKQ
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGRLIQIVV VLARFGAGLA FAVIMAAVLV QVVGRIYGSS PVWTEELTRY ALLYMVAFGA
61 GLAFRTGDLV NVDVISESLP GRLPWALRLF SAIATGGLAL YLLPHAWKYV AIGKMQTAPA
121 MGIRMDFVHL TVWLMLAGLA LFAVLRVIGM LAGADDGTPH IAEEEE
SEQDB ID: 3101377CKR
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTCPCRSMH PSKEETSMKF TFKVSALAAA VAVAVAAPVA AQEMTLKLGH LANEENSWHK
61 ASVKFGQELS ALTDGRIAVE VFPNESLGKE IDLINGMQLG TVDMTITGES LQNWAPKAAL
121 LAVPYAFKTI EDMDAFAAGP IGDEIKAQII EKVQIRPIAY FARGARDLTS NRAITSPADL
181 NGLKMRVPNV PLFVDVWKAL GANPGPMAFS EVFTSLQNGT IESQENPLAL IRSASFYEVQ
241 SHVNLTDHVR SWIYLTIAES TWNKLSADDQ NAVMEAAARA QAYERGLFEA SLAADRAFLE
301 SKGMTFVEVD AAAFQAAAKD AVLANVNEEI KPIVEGLFAE
SEQDB ID: 3101377CKT
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIERNSAWE LDPAVPITPQ ITRILRERII QNDLKPGDRI SESELARAYD VSRQPIREAF
61 IKLADQGLVE VRPQRGTIIT KIGYAAVLDA RFLREAIEAD IAKILAADPD RHVIAELRDQ
121 LARQASLDRR DPGAFIRLDE LFHRTLAEAA GKGGAWKQIE GLKSQMDRVR YLALGEFGIE
181 TLVRQHRAIV DQIELGDVAG SNKAVRHHLR EVLKDLPQIV EANRSSFQLP DGDMPLPVNA
241 PIQGGN
SEQDB ID: 3101377CKU
Reference:
3101377
Name: mannonate dehydratase, Class: EC4.2.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uxuA
Sequence:
1 MERTWRWFGP SDRVTLADVA QAGATGIVTA LHHVPTGAVW SPDDIELRQN QVATLPDGKP
61 SNLEWSVVES LPVSEDIKKQ RGDWRQHIAN YRESLRNLAA AGIEVICYNF MPVLDWTRTD
121 LAWRLPNGAT CMRFDLIDFV AFDLHILKRE RAGEDYEEEL RAQAARRFSE MSAEAAETLA
181 GNVVFGLPGA AERFTLEDVR EHLAEYAGMR EEALRGHLVD FLSEVVPLAQ ELGLRMCCHP
241 DDPPFPLLGL PRIMSTEAHY KAVMDAVDVP ANGITLCSGS LGARPDNDLP GMMDRLGDRV
301 HFLHLRNVKR ETANVRGSFY EAEHLGGDTD MVALVEAALR EEARRKAAGR RDQSIPFRPD
361 HGQDILDDLG RRAQPGYPSI GRLKGLAELR GIIAALEPRI AAR
SEQDB ID: 3101377CKV
Reference:
3101377
Name: D-mannonate oxidoreductase, Class: EC1.1.1.57
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uxuB
Sequence:
1 MITPLAGLDG LPKTVRCPAY RREDHGPGIV HIGLGAFHKA HQAVYTDDAL AAEGGNWRII
61 GVSLRSTAPA TELGRQDGLY TVIERSVEGT SARVIGAIAA AYSLGRDRQA VLDALCDPST
121 RIVSLTVTEK AYGIDRKTGG IDRNHPAIAA DISDPDNPQG VAGLLVWALS RRRDAGTPPF
181 TVLCCDNLPE SGSMLRALLV DYARLAAPHL VDHITNAVAF PSTMVDRITP ARTPATLALA
241 CDLIQHSDAA AIECEAFRQW VIEDDFPTGR PAWEAGGALL VRDVRPFEDM KLRMLNGTHS
301 MIAYAGFLAG HKYVRDVMAD TSLAVLVERH LKAAATTLDP LSGVDFSAYA AELRARFSNP
361 HLEHETYQIA MDGSEKMPQR IFAPALDALE KGQPLDAFAF ATACWLRYLM GRTDGGHAYA
421 LRDPRETEIT AALTGAATAE DILSSISRLP GILPQRLEES ATWRRLVINM TTELLSGDIP
481 AVLDRFASDA GRLG
SEQDB ID: 3101377CKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHSISNTTL VRRDRLRQLQ QREKAWFDLE FLKAIAPEDR SRCIDLLDRS KSQLRQDLFA
61 LCQTGFKEDG FFVEFGATDG IELNNSYLLE TGFGWSGILA EPARGWHAAL KANRAATIET
121 RCVWHTSGET LGFTEAPRGE NSGISTFVKS SRRIRGQNYK VETISLVELL ETHQAPAHID
181 YISIDTEGSE FDILNAFDFD RWTFGVMTVE HNHAPQREDI HALLTGKGYR RVLQDISRFD
241 DWYLREG
SEQDB ID: 3101377CKX
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKQGYHHGN LKQALIDAAL ELIRAKGPTG FTLSEAAKTA GVTPAAVYRH FDGREELIAE
61 AARQGFEIFA DLMQYAYDKG QPSALAAFEA TGRAYLAFAR KHPGHYIAMF ESGISVNRSP
121 ELAAASNRAK AVLEQAAADL SDHIPPGKRP PAAMVSAHIW AMSHGVVELY ARNAGATAPF
181 APEDLLESGV GIYLRGLGLI PPD
SEQDB ID: 3101377CKY
Reference:
3101377
Name: polyphosphate kinase, Isotype: 2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRNGSTKDP RRMTGAATGE ISRYFNDKAP KDIRRAIEKA DKDDILSTTY PYDAEMTAKD
61 YRAQMEALQI ELVKLQAWIK QSGARVALLF EGRDAAGKGG TIKRFRENLN PRGARVVALS
121 KPTEAERSQW YFQRYIQHLP SAGELVFYDR SWYNRGVVEH VFGWCDEEQR ERFFRQVMPF
181 EHDLVDDGIH LFKFWLNVGR AEQLRRFHDR ERDPLKQWKL SPVDIAGLDK WEAYTTAISQ
241 TLTRSHSDRA PWTVIRSDDK KRARLAAIRT VLSGIDYDNK DRAAVGQPDA AICGGPDIWD
301 A
SEQDB ID: 3101377CL
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMTRLISLL LAGFLALAAC TDTGGSGQLG SDGKPLPKVY RIRGDASKLQ FRMLDSVNAL
61 RQASGLGVVQ LSPELNAAAA THARDMSVQN RPWHFGSDGS SPIDRARRAG YTGIFLGEAI
121 SETYETEVET LAAWMEEPGS RSVILDPKAI MMGFAWFQEN NGKIWWALEM GS
SEQDB ID: 3101377CLA
Reference:
3101377
Name: esterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVVLILALL AAGFWALTLW RAARHEARAQ ASHPPLGQFV TVEGLRIHAE VMGSGPDLVM
61 IHGSNGNTRD LSFVLAPILA DHFRVILLDR PGLGFSDPAP AGAADIAGQA RLLMLAAEQL
121 GAKRPIVLGH SYGGSVALAW AVHHPDRLAA LVPVAAPSNP WNTPLDLLYR VTSTRLGAAV
181 AVPLITAYVP DSYVTRALED VFAPQPAPAG YADHFGPGLS LRRASLRANA AHRASLLGEI
241 EALHPRYGEI AVPTEIVHGT EDDTVNFDLH STTLSGQISG AVLTPLPGVG HMPQHVAAQV
301 VADAVLRAAT RAGLR
SEQDB ID: 3101377CLB
Reference:
3101377
Name: Hse O-succinyltransferase, Class: EC2.3.1.46
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metA
Sequence:
1 MPIKIPAHLP AYDILTREGV MVMSEDQAAR QDIRPLRIGL LNLMPKKIQT ETQFARLIGA
61 TPLQIELSLI RMTEHQTKTT ASEHMEEFYR PFQEVRDEKF DGLIITGAPI EHLEFSDVTY
121 WDELGEVFAW TQSNVHSTFG VCWGGMAMIN HFHGIRKHML DHKAFGCFRH RNLDPASPYL
181 RGFSDDFVIP VSRWTEVKQA EVDAVPELVT LLGSDEVGPC LISDPGHRAL YIFNHFEYDS
241 DTLKQEYDRD VEGGTAINVP INYYPDDDPS RKPLNRWRSH AHLLYGNWIS EIYETTPYDM
301 ARIGLESTDL RG
SEQDB ID: 3101377CLC
Reference:
3101377
Name: ssDNA-specific exonuclease, Isotype: RecJ, Class: EC3.1.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recJ
Sequence:
1 MRQQTDLPQA VCQVLARRGV PAIEARGFLD PKLKELLPDP RKLKDMEIAA ARFLAAVAGR
61 QRIAVFADYD VDGGSSAALL ICWLREMGQT ATLYVPDRID EGYGPNEVAM ADLARGHDLI
121 VCVDCGTLSH GPIAAAKGAD VIVLDHHLGA ETLPECVAVV NPNRQDESGD LGYFCAAGVV
181 FLMLVEAGRQ LRARGQRGPD LMAMLDLVAL ATVADVAPLI EANRALVRQG LKVMAQRQRP
241 GLVALADIAR MDAMPNTYHL GFLLGPRVNA GGRIGQADLG ARLLSTDSMS EAQALAERLD
301 LLNTERREIE AAVRAAALDQ AETRGLEAPL VWAAGEGWHP GVVGIVASRL KESANRPAIV
361 IGFDGDEGKG SGRSVAGVDL GASIQRLAAE GLLVKGGGHK MAAGLTVLRD RLEPAMERLS
421 ELLAKQGAGQ GGPADLRLDG VLMPGAATVE LLEQIELAGP YGASAPAPRF ALPDLQIRFA
481 KRVGASHLKL SLADGMGGGL DAILFGAFDG EIGPILENHG GARFHFAGRL EINSWGGRQS
541 VQLRVDDVAR A
SEQDB ID: 3101377CLD
Reference:
3101377
Name: fructose 1,6-bisphosphatase, Isotype: class II, Class: EC3.1.3.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glpX
Sequence:
1 MPEFHDRMLS LGLARVAEQA ALASASLIGR GDEKAADQAA VNAMREQLNL LDIAGVVVIG
61 EGERDEAPML YIGEEVGTGN GPGVDIALDP LEGTTLTAKD MPNALTVIAM GPRGSMLHAP
121 DVYMDKLAIG PGYAEGVVSL DMSPRERVEA LAAAKGCKPS DITVCILERP RHEAMIAEVR
181 ETGASIRLIT DGDVAGVMHC AEAETTGIDM YMGSGGAPEG VLAAAALKCM GGQIFGRLLF
241 RNDDERGRAA KAGITDLDRV YTRDEMVTQD VIFAATGVTG GSLLPRIKRE PGWVETTTLL
301 MRSKTGSVRR MSYRTPV
SEQDB ID: 3101377CLE
Reference:
3101377
Name: Hse dehydrogenase, Class: EC1.1.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hom
Sequence:
1 MKPALRLGIA GLGTVGVGVV RIIRRQADLL EARTGRRIEI TAISARDAGK DRGVNLSSYA
61 WESDPVALAR RDDVDVFVEL MGGENGPAKA SIEAALETGK DVVTANKALL AIHGQALAEQ
121 AEAAGRVIRF EAAVAGGIPV IKALTEGLAG NEITRVMGVM NGTCNYILTR MESQRKGYNA
181 LFQECAELGY LEADPTLDVG GIDAAHKLAL LAAIAFGTKP HFDGIDIEGI ERINLEDIAY
241 AADMGYRIKL LGVAQRSGRG LEQRMRPCLV PADSPLGQLE GGTNMVVIEG DAVEQIVLRG
301 PGAGEGPTAS AVLGDICDIA RGFRLPVFGQ PATALAEADS AQSNSPAPYY LRLLLPDRPG
361 ALAKVAAALG DAGVSINRMR QTGHDSAEAP VVIVTHKTQR ADLDAALEAM TAAGVLAAEP
421 VALRIEAV
SEQDB ID: 3101377CLF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPRPQFTTK GPGVNSSGTR MSRTALFPLL LLMAAACTQV PELNERIGPD LRTAAFPKLV
61 PLDEALGPPV DPEGEARAVQ EALEARRAAL AGRARRLQQA SHDDSTQTST E
SEQDB ID: 3101377CLG
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARTQGSHSD ITGPRIQDAA LRLFARHGFA AVSMRQIAGE VGVQAGALYN YTPDKQSLLF
61 GLMHRHMDEL LSARRDQARG DALTRLRDFV GFHIRFHLNR PDEVFIAYME LRNLTPENFA
121 TIEGLRRRYE DDLEAILRAG VAEGVFAVPD TKIATLAVIA MLNGVNTWYR AEGRLSLDEV
181 ESVYWDMVRK AVAA
SEQDB ID: 3101377CLH
Reference:
3101377
Name: pirin domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIRPILETR RATPALEGAG VKLHRAFGFQ DPTELDPFLL FDDFRNEHPQ DYLRGFPWHP
61 HRGIETITYV LAGTVEHGDS LGNSGTLGAG DVQWMTAGSG ILHQEMPKGN PQGQMHGFQL
121 WGNLPASQKM TAPRYQDVAG SEIPEVIDDD GTRVRVIVGS FWGKTGPVDG IAADPQYLDI
181 FVPAGVKKTF RIDTYRRAFA YVFEGAGAFA DASAPTGVLL EKEVAGEEVN IRDLSGDRTL
241 IRFGTGDEVT VQAGPQGVRF LLISGAPIAE PVAWHGPIVM NTQEELMQAM RDLRNGTFIR
301 PAH
SEQDB ID: 3101377CLJ
Reference:
3101377
Name: dehalogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAMSYPANR PDRTRPTDTA AGIETTEAFE RFAQRNDVFT RAMWDPQVRS KQTDAFFASY
61 RMEAAPRRGD GFTQRDFALR NAAWLISDVV TNRFAAEGRR EGFQAPISYD TPVAPQQVGV
121 DDPAAMSAEI KRIARFFGAD LCGVTELDER WHYTARVDTR DMSEAPLGLP DGLTSVIVLG
181 HEMERDLVAT YPSALAGAAT GREYSHEAAV VMQLATYIRN LGYEAVASMN DTGLVIPYAV
241 KAGLGEYARN QMVITPEFGP RLRFSKVFTN LPLAHDVPRP RGVRAFCDIC TACADACPVK
301 ALPYGPPSDV APNVSAIRGV RKWTSDAEKC FGFWAKLASD CAICMRVCPF NRDYARRRNR
361 LWLRLALSPL RHLALRLARG HGKRRKPAEW WAGT
SEQDB ID: 3101377CLK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVTLTRGLW VGQGACSTPA QSAMQAQRIK GRHHMQDEVL ATIEASAPRR WLALAVLTIL
61 GGLLIYVAVV TPPELIWQVF LIVLGALTLW LAQRMFQATA GRVEMTATEL RGSDGTVIAR
121 IADIEGLDRG VFAFKPSNGF LLRTSVPGER TWQPGLWWRM GRRIGIGGVT PGSQTKFMAE
181 MLSAMMAERD GTLPR
SEQDB ID: 3101377CLL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRSRCNAMF KSRILNSLRL FRRNEDGSIA VEALLTVPML FWTIMIGYTY FDGYREAASN
61 VKAAYTIGDL ISRETRTVDD AYIDSMVDLF ERMVQDTASL QVRISLLRYD KKRDRHRVRW
121 SANRGYDTAL SNANVATVSS RLPPMSDQDT LILVETKNIY RSPFRVGLED TEMETFIFTR
181 PRFTNEIAGS V
SEQDB ID: 3101377CLM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRRLSNFLR RFRRGEDGNA TVEFVIVFPA VIGVMLAGVE LTFMTLNHAM LERAVDVVVR
61 DLRLNTGSNP SHNELKSKIC EKAVFIRGCS SNLKLEMIRQ DPFAGITLPA DPDCTDLSAE
121 VRPVRNFENG QANELMVLRA CAKIDPIFPT STLGATLAND EGQYSLTAMS VFVQEPL
SEQDB ID: 3101377CLN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMFNTLISIG AASRRVRNRL KDRANAFARE EDGLMTVMAL FLFLALVGAA GIGVDLMRYE
61 QKRAALQYTM DRAVLAAADL DQQVSPETVV RSYLEKAGLL EYLSSVTVQE GLGYRKVSAT
121 ATAELPTHFM KLSGYDSLTI PAASTAEESI GNVEISLVLD VSGSMNSNSR LYNLKNAAKE
181 FVDHMLSATE PGTVSISIVP YATQVNAGAD ILSYYNVSTE HNYSHCVNFI DDEFSQPGLS
241 RVTPLERTMH FDPFSYTKDP ISTPVCPVRA STEILPFSND QTVLNNYIDG LTGRGNTSID
301 IGTKWGVVML DPGTQSVISG LISDNKVPAS FQGRPSAYDS GDVLKVLIVM SDGENTNQYM
361 LNPSLRDGDS PVWYNAAEDV ISGSPDNNTT NAFSIYHDNG NNSYYWPDQN RWADHPYGNG
421 QSEACGYNSS GYYSCAMRDE PGEAVRLTYA ELFAKVSLAY NAYYNFEFNS NAWAEWYTAA
481 MTHKEASAKD QRTDHVCDAA KDEGIIVYTV GFEAPYSGRR VLKRCASSDS HYYDADGLEI
541 SDAFTSIASS IRKLRLTQ
SEQDB ID: 3101377CLP
Reference:
3101377
Name: Glu dehydrogenase, Class: EC1.4.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPKNEPSFR QSVDMMFNRA VALMDLPPGL EEKIRVCNAT YTVRFGVRLR GQIQTFVGYR
61 SVHSEHMEPV KGGIRYAMSV NQDEVEALAA LMTYKCALVE APFGGSKGGL CIDPRQYEEH
121 ELEQITRRFA YELAKRDLIN PSQNVPAPDM GTGEREMAWI ADQYARMNTT DINARACVTG
181 KPLNAGGIHG RVEATGRGVQ YALQEFFRDR VGVGKSGLDG KLDGKRVIVQ GLGNVGYHAA
241 KFLSEEDGCV ITGIIERDGA LVSDEGLDVE AVHNWIVKHG GVTGFPDGTF VAEGAKVLEE
301 PCDILIPAAM EGVINLANAD RIKAPLIIEA ANGPVTAGAD EILRKKGCVI IPDMYANAGG
361 VTVSYFEWVK NLSHIRFGRM QRRQEEARHQ LVIDELERLD RYLGDAWSMT PQFKEKYLRG
421 ADELELVRSG LDDTMRIAYQ AMRDVWHERG DVEDLRTAAY LVSIDRVAKS YRAKGL
SEQDB ID: 3101377CLQ
Reference:
3101377
Name: Sar oxidase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFSGLRVLK EGLTGNKGWR PHWRDPAPKP EYDLVIIGGG GHGLSTAYYL ARDHGLTNVA
61 VLERGYIGGG NIGRNTTIVR ANYFLQGNSE FYSHSLKLWE GLEEDLNYNV MHSQRGILNL
121 FHSDGQRDAA ARRGNMMLSQ GDDAILLGRE ELRAKVPFLN FDDQRFPLYG ALYHPRGGTA
181 RHDAVAWGYA RGADSRGVDL IQNCEVTGID VENGRVRGVQ TVRGPIRAKK VAMVAAGRSS
241 QVAAMAGMRL PIESHILQAF VTEGLKPVID QVITFGMGHF YISQSDKGGL VFGGDLDFYA
301 SYAARGNLPT VEHVMEAGMA LMPMIGKARV LRSWGGIMDM SPDGSPIIDR THIDGLYVNC
361 GWNYGGFKAV PASGNVFAHL LATDQYHPAA TRFRLDRFRT GRGILDEEGT GSQHNLH
SEQDB ID: 3101377CLR
Reference:
3101377
Name: Sar oxidase, Subunit: delta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRITCPHCGD RDSREFSYKG HALALERPAP EAGGEAWDNY VHLRENPAGE TRDLWHHHFG
61 CGAWLVVTRN TLTHEVLGCE LASEARR
SEQDB ID: 3101377CLT
Reference:
3101377
Name: Sar oxidase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVQGKGLID RDRPVSFTFD GVGYSGYQGD TLASALLANE VRLVGRSFKY HRPRGILTAG
61 SEEPNALVTI GRGGRQDPNV RATVQEIYEG MEAQSQNRWP SLSFDLMAIN DLAAPFLGAG
121 FYYKTFMWPR SFWEKLYEPV IRRAAGLGAL SGQDNADRYE RAFAFCDLLV IGAGPAGLMA
181 ALVAGRAGAD VILAEEDARM GGRLLAETYE IDGKPGAVWA EEVLAELRGM ENVRLMTRTT
241 VAGAYDQGTY AALERVSHHR ADRGAGAPLE CFWRIVARRA VLAAGALERP IAFANNDRPG
301 IMTAGAVRAY LNRWGVSPGR AVTVFGNNDD AHRTVRDLLA AGVHVAALID SRHDAPRLDG
361 VRMIRGGQVC GSGGRQGLER ITVRHPSGEE RIATDCLAMS GGWNPSLHLT CHMNGRPEWR
421 RDIAAFVPVA GMVPGLRAAG ACNGAFSTTA CLREGAEAAA EALGALGIKA AQGVLPVAEE
481 TPYALEPLWA VPGRGRAWLD FQNDVTVKDV KQAAVENFRS VEHMKRYTTQ GMATDQGKSS
541 NVAALAVLAD ATGRGIPETG TTTFRPPYSP IAIAALGAGG EGKGFQPERF TTSHAATLSR
601 GAPMIEAGLW YRPSYFPQPG ETDWQQSCDR EVGYVRNAVG VADVSTLGKI DIQGTDAARL
661 LDFVYTNMFS TLKVGRVRYG LMLREDGHVM DDGTTARLGE DHYLMTTTTA AAGQVMAHLE
721 FVAQGLHPEW DVSICSVTEQ WAQFAVAGPR AREVLNGLLD TPIDAAGWPF MSCGAVSVLG
781 VGGRLFRISF SGEEGYEIAV PARYGASLFD LLVTRVEALG GGAYGMEALN VLRIEKGFIT
841 HAEIHGRVTA YDIGMGGMVS ARKDCIGKTM AQRPGLEEPG RERLVGLKPI TAEGTLLAGA
901 HLYRQEDTAR REHDQGYVTS VCHSPVLGRM IGLGFLADGP DRIGEIVKMV DGLRGVTTYC
961 EVVTPVFFDP EGGRMRG
SEQDB ID: 3101377CLU
Reference:
3101377
Name: Sar oxidase, Subunit: gamma
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPREGGCVD KLIAKTPCAG QVPLSVGAMT VSEVDLGAMT SLSPRKGQGA ALAQALRAAH
61 GLDWPGAGRV TTAGDARAIW FGHDSVLLTG AAPDAALAGP GVLVDQSDAW TVVRLEGTGA
121 EAVLARLVPV DLRAPGFGPG ATARCRIGHM AGSVTRLEDG GFLLMVFRSM AQTLLHDLKS
181 AMEAVAARG
SEQDB ID: 3101377CLV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYRYALVALL AASPLAAAET KQQSCQYQAD VVAAIQQARL DRVKERDVPA AVAATSPTWP
61 ENYNAAIPLI APWVYQQKMR DVRDQDLSAA WLELCLKQ
SEQDB ID: 3101377CLW
Reference:
3101377
Name: DNA primase, Class: EC2.7.7.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaG
Sequence:
1 MSLPPGFLDE LRSRLSLTQV VGRKVMWDMR KSNQGKGDMW APCPFHHEKS ASFHVDDRKG
61 FYYCFGCQAK GDALTFVQQT ENVGFMEAVE ILAREAGMTM PARDPRAQEK QDHRSQLAEV
121 MEQAVRFFRL NLSAGGGGAA RDYLARRGLS AQALERWEIG FAPDGWQGLW DHLRGKGVGE
181 ELITGAGLAK PSTKGGKPYD TFRNRIMFPI RDARGRCIAF GGRAMDPKDN AKYLNSPETL
241 LFDKGRSLFN HGPARTAAGQ GQPLIVAEGY MDVIALAEAG FGAAVAPLGT AVTEHQLQMI
301 WRIADEPIVA LDGDTAGLRA ALRVVDLALP LLEAGKSVRF AIMPEGKDPD DLIRAEGPAA
361 MQSVLDQARP MVQLLWQRET EGRVFDSPER KAALDKALRE KIKLIRDPSI RAHYGQEIKD
421 LRWQLFRPQR GTKQPWQPRG GRGAAPAAAT AGTRASLLAS SGEAAQIRLR EAVILAAAIA
481 TPAVIVRFEH ALERLDCHDP DLAMLRDLAL RIGIDDPEGL RERIDQTLGP EALENLYALR
541 HVQVIPCMRR PGDVDLAEMT LAEELAKIQA LRGYDAEIEE AREDIAEDAD ESLTWRVAQA
601 AEEKQRAARS QNEDKALFDV ADNGARIKRD EREAFDAIMA GIDFRRKRR
SEQDB ID: 3101377CLX
Reference:
3101377
Name: RNA polymerase sigma70 factor, Isotype: RpoD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoD
Sequence:
1 MAAKDTAEDQ KPEDQEDEVS LDMSQAQVKK MIAEAREKGY ITYDQLNQVL PPDQVSSEQI
61 EDVMSMLSEM GINIIEDEEA EEEEQKGSTD LITTESNREV ALAGAQAEKL DRTDDPVRMY
121 LREMGSVELL SREGEIAIAK RIEAGRNTMI AGLCESPLTF QAITIWHDEL LSEDILLRDV
181 IDLEATFGNQ LDDEDDEPVV ATSAVQAVKP QREETPEYDA DGNPIVTEDD EDEDDQANMS
241 LAAMEAALKD KVLITLERIS SDYAQLSEMQ DSRISATLNE DGSFSAHDEA TYQSLRSEIV
301 LLVNELHLHN NRIEALIDQL YGINKRVMSI DSSMVKLADQ ARINRREFID AYRGRELDPN
361 WLAEMAEKPG RGWQMFIERS SDKVEELRAD MAQVGQYVGL DISEFRRIVQ QVQKGEKEAR
421 QAKKEMVEAN LRLVISIAKK YTNRGLQFLD LIQEGNIGLM KAVDKFEYRR GYKFSTYATW
481 WIRQAITRSI ADQARTIRIP VHMIETINKL VRTGRQMLHE IGREPTPEEL AEKLQMPLEK
541 VRKVMKIAKE PISLETPIGD EEDSQLGDFI EDKNAVLPLD SAIQENLKET TTRVLASLTP
601 REERVLRMRF GIGMNTDHTL EEVGQQFSVT RERIRQIEAK ALRKLKHPSR SRKLRSFLDQ
SEQDB ID: 3101377CLY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGLTKILAL AVFLGAGAQA QALTTRMGHR VLPVNDAVFE VVPRGKQRVG DFWCAASEYA
61 RRELGAGWND RIYLVRGRGP SVTTGRKTAV QFSMTPEAVG VTPLENELTT IRTGLKVGDN
121 MTVNQGNSYC EFGPVRP
SEQDB ID: 3101377CM
Reference:
3101377
Name: PTS IIA-like nitrogen-regulatory protein, Isotype: PtsN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ptsN
Sequence:
1 MELSSILKPN AVRVIGAASS KKRLFQEITD LAEATLKLDA QETLEALLER ESLGPTGVGH
61 GVALPHARVA GLDQVAGVFV LLEKPLDFGA VDRQPVDLAF ALFAPEDAGV EHLKALALVS
121 RTLREQAVCT KLRANPDPTK LYAILTESHP LQAA
SEQDB ID: 3101377CMA
Reference:
3101377
Name: ORF TIGR00149
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTEFSISTR GVGLYEFTGE VTRWLAGQGD GLLTLMVRHT SCSLLIQENA DPEVQSDLTA
61 YFDRLVPPAD HPSMRYLRHT YEGPDDMPAH IKAALMPVSL GIPVRAGAPM LGTWQGLYLV
121 EHRRAPHDRR IAAHFA
SEQDB ID: 3101377CMB
Reference:
3101377
Name: riboflavin biosynthesis protein, Isotype: RibX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRCPFCGNID TQVKDSRPAE DHVSIRRRRF CPACGGRFTT YERVQLRDLV VIKTSGKRED
61 FDRDKLERSI RISMQKRPID PERIDQMISG IVRRLESMGE TDIPSKKIGE IVMEALARID
121 TVAYVRFASV YKNFQAADDF EDFVHELRPP SPPTEE
SEQDB ID: 3101377CMC
Reference:
3101377
Name: riboflavin biosynthesis protein, Isotype: RibD, Class: EC3.5.4.26;EC1.1.1.193
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribD
Sequence:
1 MSMSDARYMA LALSLGRRGQ GVCWPNPAVG CVIVNEGRIV GRGWTQPGGR PHAEVVALAQ
61 AGGAARGATA YVTLEPCAHH GKTPPCAEAL IAAGVARVVA AIEDCDPRVA GNGFEMLRRA
121 GIEVSVGIGE DAAARDLAGF FLKTELGRPW VTLKLASSFD GRIATASGES QWITGPEARR
181 AVHAMRARHD AVLVGAGTAR SDDPSLTVRD MGVAQQPVRV VVSRYLDLPL MSQLARTARQ
241 VPVWLCHGPG VDGDRVRAWE GTGARLIPCA VEAGQISATD LLRQLGGQGL TRVFCEGGAS
301 LAASLLAADM VDELVGFTAG LAIGAEGLPA VGVLGLEQLS EAARFDLIET RAIGADILHR
361 WQRQ
SEQDB ID: 3101377CMD
Reference:
3101377
Name: capsular polysaccharide export protein, Isotype: KpsC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kpsC
Sequence:
1 MSPSGMNRAA GSDRSRLFVY NGGFLTQRRL RRILTLAGYD IRLGLPSEGD QVGIWGNSPT
61 AHRGLAVAAR HAAPLLRVED AFLRSLFPGR AGEPPLGLLL DRAGVHFDPT TPSDLEQLLT
121 SAPLDDTTLL NRARDAMARI RENHLSKYCA TDPDLPLPEP GYVLVIDQTR GDASVTASGG
181 NDALFREMLV FAQEEHPGAR VLIKTHPETA AGFRPGYYGE RDISVRVSLY DAPLSPWALL
241 DGAVGVYTLS SQLGFEAILA GHKPRVFGQP FYAGWGLTLD EHPVPRRERR LTRAQLFAAA
301 MILYPTWYDP FGDKLCELET VLDTLEAQTR AWRQDRAGWT AGGMRLWKRR PLKRMFGRFG
361 RISFTDTPAA GDPRPHMVWA ARAAASDTAT RVEDGFLRSR GLGAELVPPL SLVTDDSGIY
421 YDPTRPSALE SLIARRAELR ADQRQRAEAL IRMLTTARIS KYNLGGALPD LPPGHRILVP
481 GQVEDDASIL TGTGEIRSNL DLLRSVRAAH PQAVIVYKPH PDVEAGLRVG GIDPGTLADV
541 IATQADPMQL LDQVNEVWTL TSLLGFEALL RGLPVTTLGA PFYAGWGLTR DLGPIPARRQ
601 ARPDLAGLVH AALIDYPRYW DPRTGQPCPV EVAAQRLASG AIPHPGPANR LLSKLQGLLA
661 THAHLWR
SEQDB ID: 3101377CME
Reference:
3101377
Name: polysaccharide biosynthesis/export protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLIPVRWAK PVLVLAAMSV AASCSLPKVG PNKREIFAGS VQQEGDAFIV AVNDRVTRAT
61 AVVPALGFSD AFKNASPLTS DTIRPGDVLG LTVWENVDDG LLANEASNAT ILEEVQVDSA
121 GFIFVPYAGR LRASGNTPDQ LREVITARLE EQTPDPQVQV RRVAGDGSTV SLTGAVGGQG
181 IYPIERPTRT LSTMLAQAGG VTIQPDIAEV TVIRGNQQGK VWYQDLFNHP ELDIALRGGD
241 RILVEEDTRS FTALGATNTQ ARVPFETQDL SALEAIAQVG GLISAASDPT GVFVFRNEPA
301 EIAGLVLGRD DLQGAQRMVY VLNLTEPNGL FTARDFVIRD EDTLYVTEAP YAQWTKTISL
361 ISGGLTPLAN LQTIAGS
SEQDB ID: 3101377CMF
Reference:
3101377
Name: capsular polysaccharide export protein, Isotype: KpsS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kpsS
Sequence:
1 MPEQAQTRRV FLFLQGPHGP FFHALGRMLR AAGAEVWRVG FNAGDRAFWF HPPSFIPYKG
61 AHEDWPQAFA DLLERKGVTD IVLYGDTRPI HASAVAAAKA RGLGVHVFEE GYLRPYWVTY
121 EREGSNGNSR LMDMTLEEMR AALALSDLET PLPPSHWGDM RQHIFYGALY HWFVMFTNQG
181 YRRFKPHRDL PVTKEFQLYL QRLLLMPALA VERMLATARI RNGGFPYHLA LLQLEHDSSF
241 QQHSPFSTMT DFLEEIFDGF ARGAPQHHHL VVKAHPLENG RVPLRREVRR LARQHGLEGR
301 VHYVRGGKLA QLLNDARSAV TVNSTAGQQV LWRGIPLKVF GRAVYDKPEF VSTQTASEFF
361 AAANRPDARA YKEYRRYLLE TSQLPGGFYS RKGRRQLLRQ VVDMMLSPDD PYDALKSGKA
421 APRQQLRLVN
SEQDB ID: 3101377CMG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVAPFLTSYA RFSGLASILT GQSGETMTRV GQAGKRGLAA RVAGRYLGAG MAQQR
SEQDB ID: 3101377CMH
Reference:
3101377
Name: riboflavin synthase, Subunit: alpha, Class: EC2.5.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribE
Sequence:
1 MFTGIVTDIG TVVELEQRGD LRARIRTGYD TSGIDIGASI ASDGVCLTVI ALGPDWYDVE
61 ISAETVSKTN LGGWSVGKRV NLERALKVGD ELGGHIVSGH VDGVAEVVAM ADEGDSTRVT
121 LRAPADLARF IAPKGSVALN GTSLTVNAVE GAEFGINFIP HTKEATTWGG VAVGDRVNLE
181 IDMLARYVAR LAEAL
SEQDB ID: 3101377CMJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGIGHNGGP SMEHGRLWRT HAWRQAQKAL MPEAIPMLVL RMRMRRAAEL GMTYRTYAKV
61 RQYSGQDILG LLFSSNALRI FGSGGEIPEA EAQIVTQVAA AARLSLVHPP ATPQAVLAAN
121 RALAAADRAP HLSDSWAQMR DRVQGLIHSQ RLPSSGVLVI GDAPLEADWA AAGRAAGYLP
181 SAEYFAHQAG
SEQDB ID: 3101377CMK
Reference:
3101377
Name: 3,4-dihydroxy-2-butanone 4-phosphate synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFETPGPVE ARLRDAISPI EEIIDEARKG RMYILVDHED RENEGDLCIA AEFADAAAIN
61 FMATHGRGLI CLPMTADRID RLGLPMMAVN NSSRHETAFT VSIEAREGVS TGISAADRAL
121 TVATAINEQN TMASLATPGH IFPLRAKRGG VLVRAGHTEA AVDISRLAGL NPSGVICEIM
181 KEDGTMARLP DLVDFAERHG MKIGTISDLI SYRARNDNLV DETARSTVTS EYGGDWEMRI
241 FTDQTHGIEH VVLVKGDIST PEPVLTRTHA LHEASDVLGL GPKPTQELPR AMEKIAAEGR
301 GVVCLFRQPR NALYASDEDG VRTIKQTGLG AQILSKMGLH ELILLTDSPQ TRYLGLDAYG
361 LTIVGTRPIL KDA
SEQDB ID: 3101377CML
Reference:
3101377
Name: riboflavin synthase, Subunit: beta, Class: EC2.5.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribH-2
Sequence:
1 MAGHETHYTL PRPEFDKPVK LLIVVAPYYK DIADNLVAGA KAEIEGVGGS WDLVEVPGAL
61 EVPTAIAMAD RQSNFDGYVA LGCVIRGETT HYDTVCNDSS RAIQLMGLQG LCIGNGILTV
121 ETRPQAEVRA DPGAMNKGGG AAAAALHLIA LGRKWGASRK DVGFRPKADD ILLAEDKNGS
181 RTA
SEQDB ID: 3101377CMM
Reference:
3101377
Name: transcription antitermination factor, Isotype: NusB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nusB
Sequence:
1 MSQSDTPKPV NRKRQMKSAA RLYAVQALFQ MEHSGQTVES VVSEFLEHRF GAVYEGDELA
61 EGDAALFRAL VGDAVNNQAL IDQMTDRALV AKWPIARIDP TLRALFRAAG AEFSQNDTPP
121 KVVITEFVDI ARAFFPEGRE TSFVNAVLDH MAREARPDAF
SEQDB ID: 3101377CMN
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNVTQFALD LLESLSHIFD DAARWEHAVA RLNEFGFKAL NMGQFTPKSG ILHWARSSMA
61 PNWLKLYAEG GYSDADLVLA QARQGPESLY IDSGRRLQES NSDTALALYS GLVEHGYRHV
121 FSLIVPCPGN QAMLVALFTD HPEADSWMTE QSAGMRILAT VIGTNLGPGT EHGQSSGQDL
181 TPILGTTAPL SRREREALHL LADGLRNEQI AAAMKISEVT VRMHLKSARD KLRAPTREAA
241 LVRAMQMGLL SDPAYRNR
SEQDB ID: 3101377CMP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRLIRLYVT QVLVGFAISA VFIAGLLWLD IAGLRGLIVR SDSALLAVFM LWFMNGIVFA
61 GVQFAWKIMS LAEDDTPPRG GSKVSDLRPV PVRQEAPAHR G
SEQDB ID: 3101377CMQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMTLDLQPG QRLARGVARH LRAHGFVSVE EFVPARGLRV DVMGLGPKGE IWVIECKSSR
61 ADFQADAKWQ GYLEWCDRYF WAVDMEFPAE LLPAESGLLI ADAYDAEIVR MAPEQKLAPA
121 RRKVLIQKFA THAARRLQAL RDPEGHGIFE
SEQDB ID: 3101377CMR
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTPVLRLFR PDDAPWLVEQ HGVHYARAEG FDDSFGPLVA RILDDFIADH DPDRERGWIA
61 EADGQRLGSI FCVRLDETTA KLRLFLLVPE ARGRGLGRRL LDTCMGFARD KGYTQMQLWT
121 HESHRAACAL YAATGWQLTD SKPVHSFGVD LVEQSWKITL
SEQDB ID: 3101377CMT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPGPCPYTT PKEGRRITNS GGGQHMAQTQ VAADTGRKPF NIVVVGQNNR LQYEAVLFAA
61 SLRHSSPGFN GRLFVAHPQP GPKWDEDPSI QSDEVRAALD TLGAELLPFE NKVFGQTYPH
121 GNKIEALLAL PEGEPFVFFD TDTLITGDLM SVPFDFSRPT ASLKREGTWP QPTLYGPGYT
181 EIWRALYSRF GLDFESSLDF EQPDEYWKRY LYFNAGFFYY ECPHKFGHRF LTYARSIRDT
241 PLPELICQSL NPWLDQVALP LVIHSFGGGR DCLPEGLLDG AVSCHYRLFP LLYARESDRV
301 IEVLEEVASP NKIKKVLKNY EPLKKMVYQG KGEKIREMFD RENLPHKEQA IRNRIKSKGL
361 WLR
SEQDB ID: 3101377CMU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGPIQMLDI LLFLIAGAAQ SGQVEGKTPA PSDSAAVTAP AEAPAAPAFL APEPKAEAPA
61 TPAFLSPAPQ LVAEPQVPSG KFTTATEVKP ILNATRGNWV ALRDYNGQDL LYVTHLWSWR
121 CGLAQMSVSI NGAAPEIWPL PPCHAETAAP NAIIDSDGLP FRSYPSGSVA QIAVELIYDD
181 LSADSASFAR AQVLMP
SEQDB ID: 3101377CMV
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPILFLVLL FASVPIALVL ALTALWYIYD SGNLVLYDSF AQQMFAGVEN YGLLAIPLFI
61 LTGELMNEGG MTQRLVHAAR VFVGGFRGGL AYINLLANMF MAAIIGSAAS QIAVMSRAMV
121 PAMKDEGYDP GFAAATTAAG GLLAPVIPPS MLFVIYGVLA QLPIGDLFIA GIIPGLIMAG
181 SFFVVVALIG LSQQFPKGEW MTMPQALRAL RDALPAFLIP LAIVGGILFG IATPTESAAV
241 ASLIAFGVGW LVYREIHIRD LGAMFARTAT NSSLVIFMIA AANVFGWVVI YEELPQKLAA
301 FLSTVTSDPF TFLLIVNLCL LFVGMLIDGI AALILITPIL LPIAMNSYGI SPYQFGVVIS
361 LNLVLGLLTP PVGVGLYIAS AMSGVRPFTI FTALWPFLLA VAVVLVMLSY FPILSTALI
SEQDB ID: 3101377CMW
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPARFTTAEG RHMLYRASHL WASVELVCAA ALAASVTGLI LLNVVTRAAG NAIYWVDEAA
61 IYAMVWMTFL AASAAIHFRS AIAVTLVNEM LGSHSARLLE RVVDLVLFLF ACLMVWICLR
121 WFMPLELMRA GWDVKAFQGQ TFNFIYAEPT NTLGLPKVWV WLVMPLFTLG ALLHSAANLI
181 NPGRHPEAEA AQ
SEQDB ID: 3101377CMX
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTISFKGLAR GVACAALVLA ALPAAAKEFR LGLITPPPHT WTKAAEAFGA ELSEKSGGAH
61 SVSVFPARQL GNEAQMLQQL QTGALDMAFM TVAEVSNRVP NMGAFYAPYL AGDINHAAAI
121 LRSDTARGML AVLPQEAGVV GVGFGSAGMR QILSRGAVNS AADLSGLKLR ITPFDPILDF
181 YNALGAAPTP MPLPAVYDAL ANGQVDAIDM DVELINVLKY HEHADTILIS NHMMFPMVGL
241 ISARVYAGMS DADKAMISEL MAKHVDSTLD VYMVKEPEWT DALTKVGKTF KRVDQSFFGD
301 AIAQWETIWA DKAPSLPELR KTAADLQ
SEQDB ID: 3101377CMY
Reference:
3101377
Name: 3-hydroxyanthranilate 3,4-dioxygenase, Class: EC1.13.11.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLSAFNFQ KWIDEHKHLL KPPVGNQQVW EDADLMVTVV GGPNKRTDYH DDPVEEFFYQ
61 LKGDMVLKLY EGGEFYDVPI REGDIFLLPP HVRHSPQRPQ EGSIGLVIEP KRPEGAHDAI
121 EWFCFGCGSL VHRAELLLES IVRDLPPVYQ AFYADEQART CPNCGEIHPG KEPPEGWVKL
SEQDB ID: 3101377CN
Reference:
3101377
Name: ribosomal subunit interface protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRYQISGKQI DIGAALQSHV QTELGEVVSK YAQRPTDAHV VFSRSAHEYV CEATVHLSTG
61 LTAQAKAHAT EIYAAFDGCC EKMDKQLRRY KRRLKDHHKD RAEPVELFGA SSYILASEEP
121 DAQSEPDSLQ PMIVAEMETK IPSLSVGEAV MQMELAGAPV LVFRNESKDG LNVVYRREDG
181 NIGWIDP
SEQDB ID: 3101377CNA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDHLCVNML SSCPRCASSS GNRASRRYPM RINADFTRRA AVHFDQTDWV PSPAPGVERK
61 MLDRIGAEVA RATTIVRFAP GSAFSAHTHD GGEEYLVLDG VFQDELGDFP VGSYVRNPPT
121 SSHTPATEPG ATILVKLHQF DPADRTEVRR SINGKSDETL FSDSHEEVRL ESWAAGAQVT
181 RDLPGGIEVF VLEGGFQEGG ETFSRWDWLR LPPGARLDLT AGAEGARVWV KSGHLAAMV
SEQDB ID: 3101377CNB
Reference:
3101377
Name: pyridine nucleotide-disulfide oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMAQGQMAPG IVAGRLSSEE LAANFDDLHP AYAPHEAAVA ADRCYFCYDA PCQTACPTEI
61 DIPLFIRQIQ TGHPEAAART ILEQNILGGM CARVCPTETL CEEACVREAA EGKPVEIGRL
121 QRYATDTLMA RGVHPFTRAA PSGKRVAVVG AGPAGLACAH RLALLGHDVV IHEARPKAGG
181 LNEFGIAAYK ATGGFAGTEV DWLLQIGGIT VEQGSALGQG LTLDALRAGY DAVFLSIGLA
241 GVNALRAAGE DKDGVRDAVD FIAELRQAGD LSALPVGRNV VVIGGGMTAI DAAVQSKLLG
301 AENVTVAYRR SRAEMGASGF EQDLAASKGV RLMFNVMPVA VHGNGAAVEI ELEYTTSAGG
361 SVTGTGETVR LAADQVFKAI GQTLEGVPEG LELEGRKIKV DGSGRTSVPG VWAGGDCASG
421 GEDLTVTAVA EGRDAAMDIH ARLSA
SEQDB ID: 3101377CNC
Reference:
3101377
Name: dihydroorotate dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADLKTNFLG IESPNPFWLA SAPPTDKEYN VRRAFEAGWG GVVWKTLGSE GPPVVNVNGP
61 RYGAIYGADR RLLGLNNIEL ITDRPLETNL EEIARVKADY PDRAVIVSIM VPCEEAEWKA
121 ILPRVAETGA DGIELNFGCP HGMSERGMGA AVGQVPEYIE MVTRWCKTYY DKPVIVKLTP
181 NITDIRYPAR AARNGGADAV SLINTISSIT SVNLDNFSPE PSIDGKGSHG GYCGPAVKPI
241 AMNMVAEISR DPATQGLPIS GIGGVTTWRD AAEFMSLGCG TVQVCTAAMT YGFRVVEEMK
301 TGLSQWMDEK GYTSVNDFIG RAVPNVTDWQ YLNLNYVAKA KIDQDQCIKC GRCYAACEDT
361 SHQAISMSED RVFEVMDDEC VACNLCVDVC PIDGCISMVP MQPGETDPRT GKVVQADYAN
421 WTTHPNNPMA RAAE
SEQDB ID: 3101377CND
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTLPHPDQA RRWLEQIFAT RAVQRGAVVR RSIAWVDREV GKERFLTEMR RRNFHVIETA
61 DQFVVVCHNG PIRLLF
SEQDB ID: 3101377CNE
Reference:
3101377
Name: membrane protein, Isotype: major facilitator transporter family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRQLLPVSA LLLGSALLLF AGGMNSLILP IRGAQEGFSA SALGLLGTGW ALGYVAGCFY
61 TPRLVGKVGH VRAFSVMSGI AAVAVLLSLL LLTPWTWIPL RAMSGFCFAG AAMIVESWLS
121 ERAEPSTRGR IFGLYTMVNL GASTAGQLVL TMGDTTGFMF FVLPAIFYCL ALMPTAMSSK
181 TVPKPLVSVR LDLMALWRNS PVAVIGVLCV GVSNSAFGTL SAVYADGIGL ALTTVALFAS
241 LPVLAGAVSQ IPIGWLSDRL DRRAVLIGVA VLALAVDTIF IVLSPETRML NLVLASLFGA
301 AIYAMYPIII AHANDHAAAD QAIQVSGGLL MLYGLGSILG PLLAGFGMET LGGTGLFMTS
361 AGAHVLLILF SGLRILLRAP VAEADKSSFV PAPAGRATTP ETAALASAES DEVDEDEEET
421 PSPDAG
SEQDB ID: 3101377CNF
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQDRAPTRI QKKNRAAILD AALNVFSAHG FRGATVDQIA AEAGLSKPNL LYYFPSKEAM
61 HEALLAELLD TWLDPLRALD EQGEPLTELL AYVHRKLEMS RDYPRESRLF ANEIVQGAPR
121 IYQALSEDLK VLVDDKVALL EGWMAAGRIA RVHPYHLLFS IWSLTQHYAD FDVQVRAVLG
181 DEDPFDGADV FLDTLYRRLL SPRPD
SEQDB ID: 3101377CNG
Reference:
3101377
Name: amidase, Isotype: hydantoinase/carbamoylase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAPAQNLRI NVDRLWDSLM EMAQIGPGVA GGNNRQTLTD EDGEGRALFQ KWCEAAGCSM
61 GLDQMGNMFA MRPGTDPDAL PVYVGSHLDT QPTGGKYDGV LGVLAGLEVI RTLNDLGIRT
121 KHPIVATNWT NEEGTRFAPA MLSSGVFAGM HTQDWAYART DAEGKSFGDE LSRIGWRGEE
181 EVGARKMHAF FELHIEQGPI LEAEGKDIGV VTHGQGLSWT QVTITGKDAH TGSTPMPMRR
241 NAGLGMARVL EKVDEIALSH APHAVGAAGH IDVYPNSRNV IPGKVVFTVD FRSPDLSVIE
301 DMEARLRVEG QKIADAMGLE VAFEKVGGFD PVAFDEGCVS AIRNAAERLG YSHMNIISGA
361 GHDACWINRV APTAMVMCPC VDGLSHNEAE EISKDWAAAG TDVLFHAVVE TAEIVE
SEQDB ID: 3101377CNH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPDTATLRK RIRAAIEADL SDAPVDAVGR ATLRDFAAMR QEPEAVEVQF SGGVMGQGWA
61 VTRPNGPYLV VYLPQAGCFS LCVEGPFGPL DIGVHGNAIG CFGSV
SEQDB ID: 3101377CNJ
Reference:
3101377
Name: D-hydantoinase, Class: EC3.5.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hydA
Sequence:
1 MSTVIRNGTV VTADLTYKAD VRIENGVITE IGPGLSGDKE LDATGCYVMP GGIDPHVHLE
61 MPFMGTYSSD DFESGTRAGL AGGTTMVVDF CLPNQGESLL DAIKRWDNKS TRANCDYSFH
121 MAVTWWGEQV FNDMKTVIET RGINTFKHFL AYKGALMVND DELFASFNRL AELGGIAMVH
181 AENGDVVAEM TAKLLAAGNT GPEAHAYSRP SQVEGEATNR AIMIADMAGV PLYVVHTSCE
241 EAHEAIRRAR MQGKRVWGEP LIQHLTLDES EYFHPDWDHA ARRVMSPPFR NKQHQDSLWA
301 GLQSGSLSVV ATDHCAFTTE QKRYGVGDFS KIPNGTGGLE DRMPMLWTHG VATGRLTPNE
361 FVAVTSTNIA KILNCYPKKG AVLVGADADL VVWDPEKSKT ISAGSQQSAI DYNVFEGKEV
421 KGLPRFTLTR GQVAVHDGEI RTQEGHGKFV AREANTPVNR ALSSWKELTA PRPVERSGIP
481 ATGV
SEQDB ID: 3101377CNK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDQMPDTCQ KLRLGETYAG KQGFDYFQGI ARETTGARSI CMHMLRIPPG GRAKAHLHAE
61 HETAIYVIEG SAVMYWGHAL EHKMETNAGD LIYIPAGVPH LPINTGKSEA VAILARTDPH
121 EQESVVLLPE LDALVPE
SEQDB ID: 3101377CNL
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGTGQQPEL SSVVSAKGLD LTFQTNDGPV HALKDVNLEI NKGDFVSFIG PSGCGKTTFL
61 RCIAALETPT GGSLTVNGMT PDEARRKRAY GYVFQAAGLY PWRTIAKNIK LPLEIMGFSR
121 QEQEERVRKV LELVDLAGFG GKFPWQLSGG MQQRASIARA LAFDADILLM DEPFGALDEI
181 VRDHLNEQLL ALWARTGKTI GFVTHSIPEA VYLSTKIVVM SPRPGRITDV IESPLPKDRP
241 LDIRDSAEFI EVAHRVREGL RAGHADD
SEQDB ID: 3101377CNM
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEPEFGSNSG PISLQEIGVA RAGRDSMKSL LAVLTVLAVI VGLWYAACVP MNIHGVLVAA
61 ERGGAVVEPA DGAARRGMSG VSLALKNRFA VPETWAQERP RLPAPHQVAI ELWDTTVMKK
121 ITSKRSLVYH GWVTLSATLL GFGIGTVLGV LLAVGIVHSR VMDMSVMPWA IVSQTIPIIA
181 LAPMIIVVLY SVGVQGIIPK AVISAYLSFF PVVVGMVKGL RSPDAMQLDL LRTYNASQGE
241 TFWKLRLPAS MPYLFASLKI GIAASLVGAI VGELPTGAVS GLGARLLAGS YYGQTVQIWS
301 ALFGAAILAA CLVGLLGVIE RLVLKRMGMA
SEQDB ID: 3101377CNN
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTEEGLGGA RMMLVLVALL VWGAAWWLNT RLAEGPQAGT RPVRLAVPLI FGATILVVWE
61 LVVRGLEVPL VILPAPSLIA ARFAGSLPIL WADFVQTFVK GALSGYLIGC GAAFVMAVAV
121 DRSEFLRLGL LPVGNFVAAL PIVGTAPILV MWFGFDWQSK AAVVVVMVFF PMLVNTVAGL
181 RETTAMQRDL METYAASYWQ SFFKLRLPAA MPFIFNGLKI STTLALIGAI VAEFFGSPTL
241 GMGFRISTSV GQLALDMVWA EIVVAALAGT LFYGLVALIE HHVTFWHPSQ RR
SEQDB ID: 3101377CNP
Reference:
3101377
Name: ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPFGTLPKG VRLIPYPTRS RTEPGQRNRQ PTRSEIMKKL MNGAALALAL AAGPALAADE
61 VKLQLQWVTQ AQFAGYYVAL DKGFYDEEGL DVTILPGGPD IAPPQVLAGG GADAMLNWMP
121 SALAAREKGL PVVNIAQPFK SSGLMLTCWK DTGITGPQDF KGKTIGVWFF GNEYPFLSWM
181 SQEGISTDGG ADGVTVLKQG FNVDPLLQRQ ADCISTMTYN EYGQVLDAGV SEDELVTFKY
241 EDMGVATLED GIYVLEDNLK DEAFKDKMTR FVRASMKGWK YAEANPDEAA GIVLDNDATG
301 AQTEAHQVRM MGEIAKLTAG SNGALDPADF DRTVGTLLAG GSDPVITKTP EGAWTHEITD
361 AALK
SEQDB ID: 3101377CNQ
Reference:
3101377
Name: sulfate/tungstate uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSFAQEMQA AFTLILAGDS ELLGIVALSL RVSLLAVLFA ALIGMPLGAA LAVGRFPGRR
61 ALVVLVNALM GLPPVVVGLL VYLMLSRSGP LGVLQLLYTP TAMIIAQVVL VTPIIAALTR
121 QVVEMLDAEY AEQMRSLGLS RLATVPVLLW DGRVALLTAV LAGFGRAIAE VGAVIIVGGN
181 INHVTRVMTT AIALETSKGN LALALALGAV LIGIAIAVNA LVSLLGARSR AEVMAHA
SEQDB ID: 3101377CNR
Reference:
3101377
Name: sulfate/tungstate uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDLVEESGL MIEAQGLRIA RGGQRLLDVA HLRLGGPGPT VILGPNGAGK SLLLRCLHGL
61 IGADVGAVRQ NGRPLDGDER ARQAMVFQRP VMLRRSVAGN LDFVLRRRGL ARRQRQDRIA
121 DLLAEGGLQS RGGQSARSLS VGEAQRLAIL RALATEPEVL FLDEPTSALD PGATQAIEAL
181 VLRASTRGVR IVMVTHDIGQ ARRLAADVVV MMGGQVVEQG PAAQVLDDPA NGAVRRFLAG
241 ELIF
SEQDB ID: 3101377CNT
Reference:
3101377
Name: sulfate/tungstate uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGSVFRMGA LVLGLMAGSL AQAGDFIVVQ STTSTQNSGL LDHILPAFEA ETGIEVRVVA
61 VGTGQAIRNA ANGDGDVLLV HAKAAEEKFV AEGWGVERFD VMYNDFVLVG PASDPAGVRG
121 GSDIVAALSA IAGAEAPFAS RGDDSGTHKA ELRHWASAGI DVSAASGGWY RETGSGMGAT
181 LNLAAGMGAY ALSDRATWIA FGNKGDLVVA VEGDARLFNQ YGVILVNPAK HPGVKAEAGQ
241 RFIDWLTGDE GQAAIAGYTL DGQQLFFPNA K
SEQDB ID: 3101377CNU
Reference:
3101377
Name: DNA-binding protein, Isotype: excisionase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEFLTTREL ADLLRIGERK AYDLAASGEV PHVRAMGKLL FPRAEVLAWL NASRAGPRVA
61 EPPLPPILAG SHDPLLDWAL RESGAGLATY YDGSFDGLTR LKERKAQAAA LHIREADGFN
121 TASLRDALGE APVVLIEIAR RQRGLLLAPG VSGITGLADL RGRRVAMRQS SAASQHLFLA
181 ELENLGITPA DLAPDPACAR TEEDLAMLLQ SGKAEAGFGL GALASPHGLG FLPTHEERFD
241 LAIWRRAAFD PPMTRLMSFL RGPAFATRAT EMGGYDLSGL GTVHHNGASG
SEQDB ID: 3101377CNV
Reference:
3101377
Name: WD domain/cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGARAPFAVA GRGEIGRGQQ GQAQPGGMMR ALALALLLWP ACAAAEFFTL KGHGGPVMGI
61 AVGPEGQIAT ASFDNSVGLW TGRAPHWFEG HEAAVNTVAF QGGVLYSAGD DFTLRRWPEG
121 TILGRHKGKI TGLALSETLA ATASWDGTIG LWPLDSRAPR SLDAASGVNA VAFSPDGTLL
181 YSAGMDGVLR LWDVASGSEL RQITRHGFGI NEIVLNDADG WLAYGAVDGV TRILDLATGA
241 ERDFTLDRRP VLALALSPDR SQLAVGDGEG YIMVIDTASW RIARDFRATL RGPVWALAFS
301 PDGANIHAGG IDDTMYSWPV ASLSEHGKMA SGERSFLKDP DQMDNGERQF ARKCSICHAL
361 TPEGGRRAGP TLYRVFGRRA GTLPGYLYSD TLAGSDIVWT EESINSLFDL GPDHYIPGSK
421 MPMQRITGAQ DRADLIAYLR RATLAKESP
SEQDB ID: 3101377CNW
Reference:
3101377
Name: formate dehydrogenase, Subunit: gamma, Class: EC1.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVLRLLICL LCLALPAVAQ EGAPDRSATG GATTLEDILA RQRGEKVDDA YRATDTGSQT
61 APLEAQLGVR GGASDSEIFR ALRYGAADVT VSARGPAADV IIQDDGMWWL SLREGALRDY
121 GTYALAGMIV VLALFYLLRG RIRIDGARTG RSVTRFAAFE RFGHWLFAGS FLVLAVSGLI
181 TLYGRDVLIP LLGKEAFATL ALACKWVHNN IAWAFMIGLA IVTVNWIAHN IPNRHDLKWL
241 AVGGGLFSKG LHPPAKKFNA GQKIIFWLCI LLGLSISLSG LSLLFPFEMP MFAKTFALAN
301 ATGLPQAMGL SLPEVMTPHQ EMQYAQLWHL IVAFAFITII IAHIYLGSLG MEGAFDAMGS
361 GEVEEQWARE HHSLWLDEVK SAEASKARPS PAE
SEQDB ID: 3101377CNX
Reference:
3101377
Name: formate dehydrogenase, Subunit: Fe-S
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARAKFLCDA ERCIECNACV TACKNEHEVP WGINRRRVVT INDGKPGERS ISVACMHCSD
61 APCMAVCPVD CFYQTEDGVV LHSKDLCIGC GYCFYACPFG APQYPQAGNF GSRGKMDKCT
121 FCAGGPEETH STAEFAKYGR NRIAEGKLPI CAEMCSTKAL LAGDGDVVSA IYRERVVARG
181 FGTGAWGWGT AYDQKGG
SEQDB ID: 3101377CNY
Reference:
3101377
Name: formate dehydrogenase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRKKTNGVA RRPQRNSILS QVGDSHVDRR AFLRGSGLAI GGLAAISATG GTVTQASAQT
61 AAGSAVETVK SVCTHCSVGC TVVAEVKNGV WIGQEPGWDS PFNLGAHCAK GASVREHAHG
121 ERRLKYPMKK EGGEWKQISW EQAIDEIGDG MMKIRAESGP DSVYWLGSAK HNNEQAYLFR
181 KFAAYWGTNN VDHQARICHS TTVAGVANTW GYGAMTNSYN DIHNSKAIFI IGGNPAEAHP
241 VSLLHVLKAK EQNNAPLIVC DPRFTRTAAH ADEYVRFRPG TDVALIWGIL WHIFENGWED
301 KEFIRTRVWG MDQIKAEVAN WTPEETERVT GVPGSQLKRV ARTMANNRPG TVIWCMGGTQ
361 HTNGNNNTRA YCVLQLALGN MGTSGGGTNI FRGHDNVQGA TDLGVLSHTL PGYYGLTAGA
421 WAHWARVWGE DLDWLKGQFA SIKDKDGKDK PLMNESGIPV SRWIDGVLED PANMDQDNNV
481 RAMVLWGHAP NSQTRGPEMK TAMEKLDMLV VIDPYPTVSA VMHDRTDGVY LLPACTQFET
541 RGSVTASNRS LQWRDKVVDP LFESLPDEVI IAKFANKFGW ADRLFRNIEM DDAETPNVES
601 ITREFNAGLW TIGYTGQSPE RLKSHMANQH TFDRTTLQAV GGPNDGEYYG LPWPCWGTAE
661 MGHPGTPNLY DMSKPVAEGG LCFRARFGVE RDGDNLLAEG VSNPGAEIQD GYPEFTMQML
721 MDLGWDGDLT GEERAAIDAV AGPKTNWKTD LSGGIQRVAI KHGCAPFGNA KARAVVWTFP
781 DPIPLHREPL YTNRRDLVAD YPTYEDRHAY RLPTLYASIQ KNDFSKDYPI ILTSGRLVEY
841 EGGGEETRSN PWLAELQQDM FVEINPRDAN NLGIRDGQQV WVEGPEGGKV KVMAMLTERV
901 GAGVAFMPFH FGGHFQGADL REKYPKGADP YVLGEASNTA QTYGYDSVTQ MQETKATLCK
961 ISAA
SEQDB ID: 3101377CP
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKPQLTVTE GSSGLRIEKL RKSYRKKTVI RDVTMTLGRS EVVALLGPNG SGKTTTFYSV
61 AGLVFPEAGK VSIDGQNVTT LPMYRRARMG IGYLPQEMSI FRGLSVEDNI LSVLDITQKH
121 AHKRRERLEE LLSDFSIEHL RRAPALALSG GERRRVEIAR CLAADPKYLL LDEPFAGVDP
181 ISVGDIRHLV SDLRNRGIGV LITDHNVRET LEIVDRAYIL HDGQVLMSGS PEEVVENENV
241 RRVYLGENFR IS
SEQDB ID: 3101377CPA
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKKTREDGA SRRDFLKLAG TAAPAAVAAA ALGSEAEAAA LPTDETRLQD TAHTRAYLDS
61 ARF
SEQDB ID: 3101377CPB
Reference:
3101377
Name: chaperone, Isotype: TorD-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRTETAPAP ISDEDRLRAD FYNFLGLLLS APPDQLLLDQ IAGLSGDETD LGQAIGALAR
61 VARVTKPAAA EREFNALFIG LGRGELLPYA SYYLTGFLNE KPLAQLRQDM AARAITRAPN
121 VFEPEDNIAS LMEMMAGMIV GRFSTPAPLA DQRLFWSRHI GPWAGHFYSD LEGAEASVLY
181 ASVGAAGRVF MEIEREAFRM TAA
SEQDB ID: 3101377CPC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSARGDFWSR RRAGVAAEER AETAALELRA RAEAQAELEQ QDDAEILARL DLPDPDLLQP
61 GDDVSRFMSE LVPDRLRRRA LRRLWRLNPV LANVDGLVDY GEDFTDATRV IEGLQTAYQV
121 GRGMLRHVEA LAAQAEAEAA PEPDTDTPDL PTEEPLAMAA TEAAPAAEAG NEAVPLRDPE
181 APAPPDATHP EGDTTAPPAP RRMRFTFEG
SEQDB ID: 3101377CPD
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETLILCDC GGSQTLDREQ IASGCGASCS RVFRALCTDE IARAAELMQA GDVVIACGQE
61 QAVFTDLATE LGVETPGFVD LRDRAGWSEQ GAEAGPKMAA LAAEALMPVA PPPAVDVISE
121 GSCLIVGPAD VACDLAEQLA GPLAVTVLLD AGDPPLSRAY DVVAGRLTRV EGALGGFRLR
181 IDGFRQLIPG GRGAFAFGPP RDGAISACDI VIDLTAGTPL VPAPDKREGY LRADPRDPLA
241 VARLALEAVQ LTGTFEKPLY VRLDESLCAH SRAGQRGCSN CLDICPTGAI TSAGDHVAID
301 PMVCAGCGAC AALCPSTAIT YEAPTVATLL ARMQRLARAY RAAGGAAPRL LVHDAHGGEM
361 IRLAARFGRG LPADVIPLEL GTVSGLGHAE MLAALAHGFA SLSVLMGPRT ERDALIRELA
421 LAEAIGGQGR LELLDFADPD ALSDHLYEAP VPEALATPVL PLGNRRQITR LAAQALNPGG
481 PVLDLPQGAP YGAVAVNTDA CTLCLSCVSL CPSGALIDNP DLPQLNFQED ACLQCGICRT
541 ICPEQAITLV PRLDLSDAAL GQRVLNEEEP FACVECGALF GVRSTVERIM EKLAGTHPMF
601 AQSAQARMIQ MCDDCRVGAH FAQENNPLSS NPKPRTVTTE DYFTKRKDH
SEQDB ID: 3101377CPE
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHALLCLSL LAFATPCNAQ EAIGLASPEV LTRSGLLQHI LPRFSLKTGI RVVADPVGPM
61 RLVSEGDGTR VFRQGDTVYL LQIEAEPRQE RFRDWLRSEI GQRTIESFTP SEGPAFVALR
121 DEAAAVETVD FEGDAALGAS LAQGKCGRCH VTGAENRMKG IGSTPSFAVL RSLPDWDARF
181 QQFYVLRPHP AFTQIPGVTA PFDAERPPPI HPVTVTIDEL EAILAFVAAT GAADLGAPLI
241 VK
SEQDB ID: 3101377CPF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGYRRDRAMS GDYNMSMRKF LKQVGVTGQQ AIEEGLRKAG SPEGGAFRAR MVLTIEGLDV
61 SHEVTGLIKD GDA
SEQDB ID: 3101377CPG
Reference:
3101377
Name: mrp/NBP35 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLREAVLAN LKKITDPVSG QDIVSAGIVR ALNVEGDTVR FVIEIDPKLA ERMEPVRAAA
61 EKAAQMVEGV AKVSAMMTAH SDKAPPELKP RAKAAPQGPQ PVAGVDRIVA VASGKGGVGK
121 STVSANLACA LAAEGRRVGL LDADVYGPSQ PRMLGVSGRP ASPDGKTILP LRNHGVTMMS
181 MGLMTNEGQA VVWRGPMLMG ALQQMMNQVQ WGGLDVLIVD LPPGTGDVQL TLSQKFAVDG
241 AIIVSTPQDV ALIDARKGID MFRQLKTPIL GMIENMSTHI CSNCGHEEHV FGHGGVAAEA
301 EKLGVPLLGE IPLHLDIRVA ADGGAPIVVS KPDSPQAEAF RRIARDLIAK GQA
SEQDB ID: 3101377CPH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTPTFPPLM QGVAAQGGDA PFERAQAQAA LGCDGGTVVH SVQADRLRAA LVLAPEVALA
61 DAMAMLPLCA VGFQNALGAL APPEVAVHLD WAGDIHVNGG RCGRLCVAAS TRDPQVQPDW
121 LVIGLDLALL PTSDMPGAHP DETALYEEGC ADVTAVTLLE SWTRHVMTWI NRWEDEGNAP
181 LHAEWMGLAR GVGEEVTRAN CTGTFLGVDE KFGMLIRTGA DTRLIPLTAL LEDPS
SEQDB ID: 3101377CPJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLARAIHFD ESDLRVFHSP ARTGEWCISG GFEFSNWSGA DLEGKARQAF ANGWLGLETF
61 GRVTFVAVTR IEEGEVAALA ENLARHFVSH YGAPSIEAAL EVARGEIAQM ADLCEGHDPN
121 TLLTVARDLS EAGVREAYRT IQPQEAELDL LAVHVTPDE
SEQDB ID: 3101377CPK
Reference:
3101377
Name: flavin reductase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETTFTPGP DSARAFRDAL GCYGTGVTVI TAQSTHGPAG ITANSFASVS LEPALVLWSL
61 ANDSARFGTF ANTRHYAIHV MAEGQHAIAQ RFALDGLDFD GVDWAPGLNG VPTLVGALAR
121 FDCEIQARHP AGDHLILVGQ VLRATHRPGK GLMFKRGQYG GFTDLL
SEQDB ID: 3101377CPL
Reference:
3101377
Name: exonuclease, Isotype: DNA polymerase III epsilon family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTGLSLRLR IFLFFCLLAA GGLAVVLGAL WLAYSRAGTP ELLDAFVLAA LSAGFGLLAL
61 VAGVWLLFDE NIAKPIERLS ASMRARAHAG VAGDLDLHAA RYLGDLAPAA AGLAGQLSSS
121 AMDTAAAVAS ETAHLAAETA RLTALLTEIP VAMLLANPAH QIVLYDGQAA GVLAQIAHPR
181 LNASLFDYFQ RAGLERAYAR LVKTGLEQSC TLTGTDGAQS YQARMKPLGD APGYMLILDE
241 ASSRIAPEAA RPLVYDFDLL NQPAEAALEA RALDSLVFAV FDTETTGLLP HKDEIVQIGA
301 VRVVKGRIVP GERIDQLVDP GRPIPPASTR VHGVSDAMVA GAPDIVAAAR QFHQFARDAV
361 IVAHNAPFDI AFLRRHGPRC GLDWDHPILD TVLLSAVLFG ASETHTLDAL CDRLGVTIPA
421 PLRHTALGDA QATAEVLCRM LPMLRARGLD TFGAVISETR KHGRLIEDLN
SEQDB ID: 3101377CPM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPWKAGGEE AMFLELIGTL VAGLAMAGVV MALNRLLGGR LPRWLAPVAA GCGMIGVTIA
61 SEYGWYSRTR AALPEGMVVI ETVESRALYR PWTYLVPYVD RFAALDSTSL KTHPGQPGQR
121 LFDLYFFGRW AAVNRLPVLV DCDSLRRASL ADGAEFAADG SVAGADWRRP PAGDPVIQAA
181 CEV
SEQDB ID: 3101377CPN
Reference:
3101377
Name: nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLTPDQITR FLKSVHPYDA LPLEELERIA TRLDAWEVER DFAVYDLGEK LPGLFIVYEG
61 QIEIRDENGA VVSHLGLRNS FGERGLMRDG HAVTSARADA HSVLLVLPPD LFSDLMAAHP
121 VVAKFFNRAR APRPQVQSLA TSRVETLMAR DPATCAPDTT VQAAAQEMRA RSISSLCVCE
181 DGALVGILTQ RDLSGKVVAE ARSPDTPVDQ VMTPAPLTLA PSAIGSDVLH AMMERHIGHI
241 PIVEAGRLVG MVTQTDLTRF QAVSSAELVS RLARATSAAE MAEVTAEIPR LLVQLVAGGN
301 RHEVVTRLIT DIADTATRRL LALAEEKLGP PPVPYLWLAC GSQGRQEQTG VSDQDNCLML
361 DDAVTKAQMP YFGELAQFVC DGLNTCGYVY CPGEMMATNP RWCQPVRVWR DYFRGWIAKP
421 NPEAQMLASV MFDLRPIGGH QALFTDLQAE TLRAARANSI FVAHMISNSL KHTPPLGLLR
481 GFATIRSGEH RNTLDLKHNG VVPVVDLGRI YALQGELTEV GTRARLEAAE AAGVLSASGG
541 RDLKDAYDLI AETRLEHQAA LVRRGEAPDN YLAPTSLSDF ERSHLRDAFV VVKTMQSAVG
601 HGKGMLS
SEQDB ID: 3101377CPP
Reference:
3101377
Name: Na/solute symporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQFTINLLF VGASFALYIG IAIWARAGST SEFYAAGRGV HPVMNGMATA ADWMSAASFI
61 SMAGLIAFVG YDNSTFLMGW TGGYVLLALL LAPYLRKFGK FTVSEFIGDR FYSSTARLVA
121 VICLIVASVT YVIGQMTGVG VAFGRFLEVS NTTGLLIGAC VVFAYAVFGG MKGVTYTQVA
181 QYVVLIMAYT IPAVFISLQL TGNPIPGLGL FGEHTASGEP LLAKLDAILK ELGFSEYTTH
241 NGDTFNMVLF TLSLMIGTAG LPHVIMRFFT VPKVSDARWS AGWALVFIAL LYLTAPAVGA
301 MARLNITDMF WPNGTDGEAV TIEQIETDPR YDWMANWQKT GLLGWEDKNG DGKIQYYNDK
361 SDAMAAKAAE KGWAGNELTN FNRDILVLAN PEIANLPGWV IGLVAAGGLA AALSTAAGLL
421 LAISSAVSHD LIKGSINPNI SEKGELLSAR IAMAVAIGVA TYLGLNPPGF AAQTVALAFG
481 LAAASIFPAL MMGIFSKKIN NSGAVAGMLA GLVVTLLYIF LHKGWFFIPG TNSFTDADPL
541 LGTVKSTSFG AIGAAVNFGV AYLVAGMTKE TPQEIKDLVE SVRIPRGAGA AQDH
SEQDB ID: 3101377CPQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADHSTTSAQ ASDAQAGYWK ANVRIILISL VIWALVSFGF GIVLRPMLSG IAVGGTDLGF
61 WFAQQGSILV FLALIFFYAW RMNKLDAEFG VDEE
SEQDB ID: 3101377CPR
Reference:
3101377
Name: adenylate kinase, Class: EC2.7.4.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: adk-2
Sequence:
1 MTTPAVLILL GPPGAGKGTQ ARMLEEKFGL VQLSTGDLLR AAVAAGTPAG KQAKAVMEAG
61 DLVSDEIVIA ILRDRLAEPD CAKGVILDGF PRTTVQAEAL DTLLSESGQR INAAISLEVE
121 DGEMVTRISG RYTCGGCGEG YHDTFKQPAE AGKCDKCGGT EMKRRADDNA ETVASRLEAY
181 HAQTAPLIAY YDGHGVLQRI DAMGEIDEIA QGLATIVKGA MA
SEQDB ID: 3101377CPT
Reference:
3101377
Name: Ac-CoA synthetase, Class: EC6.2.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acs
Sequence:
1 MSPAAQTETK LYAPSADTVA RAHVNADTYD RMYAASMADP EGFWAEQGKR VDWIKPFTQV
61 KDVNYNFGEV SINWYADGTL NVAANCIDRH LATRGDQTAI IWEPDSPTEA AKHITYKELH
121 GSVCRMANIL ESLGVRKGDR VVIYLPMIPE AAYAMLACAR IGAIHSIVFA GFSPDALAAR
181 VNGCDAKVVI TADEAPRGGR KTPLKSNADA ALLHCKDTVK CLVVKRTGGQ TTWIADRDFD
241 YNEMALEASD YCAPAEMGAE DPLFILYTSG STGQPKGVVH TTGGYLVYAA MTHEITFDYH
301 DGDIYWCTAD VGWVTGHSYI VYGPLANGAT TLMFEGVPTY PDAGRFWEVC AKHKVNQFYT
361 APTAIRALMG QGTSFVEKHD LSDLRLLGTV GEPINPEAWN WYNEVVGKGK CPIVDTWWQT
421 ETGGHLMTPL PGAHATKPGA AMKPFFGVVP VVLDPQSGVE ISGNGVEGVL CIKDSWPGQM
481 RTVWGDHERF QKTYFADYKG YYFTGDGCRR DAEGDYWITG RVDDVINVSG HRMGTAEVES
541 ALVAHAAVAE AAVVGYPHEI KGQGIYCYVT LMNDREPSDE LMKELRSWVR TEIGPIASPD
601 VIQWAPGLPK TRSGKIMRRI LRKIAENDFG SLGDTSTLAD PSVVDDLIAN RAGK
SEQDB ID: 3101377CPU
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMNKMLSGAV AAALTVSFVG EAGATEWNVS VWGKRRAFTE HVEKLAELVS EKTGGAFTIN
61 VSYGGLSKPK ENLDGISIGA FEMAQFCAGY HADKNRAITV LELPFLGVNT LAEEVAVSNA
121 VYAHPAAQQE MAQWNARLLM TSPMPQYNLV GTGAPRDELA EFEGMRVRAT GGLGAAFSAV
181 GGVPTSVPAT EAYNAMESGV VDTVAFAQHA HLSFGTINKA DWWTANLNPG TVNCPVVVNI
241 DAYEALSDDE RAALDSSVDE AIAHYLTNYG ALLKKWDDVL AEKGVEKVMI SDAVLEEFRA
301 KVAGPISAKW VEDMTAQGLP GQELLDLVHA TLKAARGS
SEQDB ID: 3101377CPV
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGHASVLQD GSALSRLDRA LLRLERGLAL ISGLAVFSLM LLAVVSVGGR NAMNAPLPGY
61 VDWIEQAMPL IAFMGIAFVQ REGGHIRMDL VIGQLKGRAL WLFELVSVLL ILGLMMLLVW
121 GSWAHFLRAF DMGAPLWSRD SSIDIGIPLW PSKLLAPVAF SVLCLRLGLQ VWGYGRAFVL
181 GLEAPVAVPL IQDVAAQAAA EAEQLAGHDN G
SEQDB ID: 3101377CPW
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMDSIDIGL WVTGGLLVLV LTGMRVAFAA ALAGLVGLVW IFWAKFGYDP DRFGKALTVA
61 VKTAGQVPHS KVSSQALSLI PTFILIGYLA YYAGLTRALF EAAKRWMAWV PGGLAVSTVF
121 ATAGFAAVSG ASVATSAVFA RIAIPEMLAI GYNKRFAAGV VAAAGTLASL IPPSAILVIY
181 AIIVEQDVGK LLLAGFVPGA FSAVIYVALI VGIAVVFKSV GPPVTGFTWR QRFASLPGAL
241 PIVFVVVIII SFVYNPFGGD AWGTPTEGGA LGAFVVFCMA VFRGMKWAEF KSALLETAKL
301 TVMIFTIIWG VLIYVRFLGF ADLPGAFSDW ITSLQMSPML ILVCILLAYA VLGMFMDAIG
361 MLLLTLPVVY PAVMALNGGE AVSAADSAFG MSGPMCAIWF GILVVKMAEF CLITPPIGLN
421 CFVVAGVRPD LSVQDVFRGV MPFFVADAVT IALLVAFPQI VLWLPTLAG
SEQDB ID: 3101377CPX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQIETVIYVL LGGLAGGFVN GLAGMGTSLF ALGFFLVVLD PVSAVALTAL LAVLAGVQGL
61 WISRAVLSSD PRRWLRFTLP GILGVPLGLM LLDWVDPAVL RRIIAAVLVL YGGYFGLRRS
121 LPRLEGQYRW VDRALGFVGG ILGGFASLSG VLPTIWLSMR AWPRAETRAV LQSYNFSILL
181 FTVAGLALRG AYEAQVWVAF AVVLPAGVLA AQAGIFAFRR ITDAQFQRLL VLLCLCLGLG
241 MLARELLAG
SEQDB ID: 3101377CPY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGAGPSGTR KRGAMTTFDL MLFACAVLLL AGTIKGFIGL GLPTVSLALL TLGTDPRMAI
61 TLILMPMLLS NLWQMGRGGS LAALIRRYGR FALVLGLSVG LTAWFSRDAG DRLLTGALGA
121 ILLLYALLDS LRRVPPLPDR HAGLIEVIWA TLTGVIGGLT AGWGGPMAMY LSARRAPRDE
181 FVQASGLLIA AGSLPLMLSY LAAGHADPRG LGLSALLLVP TFVGFALGER LRHRADPALF
241 RRALIVLFVV LGANLIWRAL SG
SEQDB ID: 3101377CQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEIRALILG LVLALGAVAA QAEGTKVAFG AVKADPTLPV EVTADSLDVS QEDGSAEFQG
61 NVLVSQGEMR LSAKRVLVIY NQEASGIERL EATGDVVLVS GSDAAQAQRA DYTIGTGVIV
121 MTGDVLLTQG KNALSSGKMT VNLTSGTAQM VGRVKTILNS GSD
SEQDB ID: 3101377CQA
Reference:
3101377
Name: phosphodiesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLVHISDIH LTRPGERMGG LDPHKRLAQA LAHVAAHHGD AARVVITGDL AHWGERAAYA
61 SLRAALGEVG PPVRLLIGNH DNREAFVSVF PDHPRDDQGY INHAETLDGL RLIYLDTVGV
121 RSHAGHFGPE RLAWLEAELA GCARARIFLH HNPMELGLPA EDRIALIPED RAPLRALLTR
181 FAGRIEYLHF GHVHAPVHGS WCGIPFAAVP STGNQSLPDL KEPDLLQGAP MAPAYNVVLI
241 RGRETIIHQI PFTWDGPVFT AGTAWEDWAK PVAAK
SEQDB ID: 3101377CQB
Reference:
3101377
Name: sugar ABC transporter, Subunit: periplasmic sugar-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPTATALAL ALSASAVFAQ DKVTIEFAYP YSHLFDVTYQ AMMPAFEAAH PDIEVKFRAT
61 YESYEDGTNT ILREAVSGNL PDVTMQGLNR QQILVEKGIA RSLAPFIAKE ADFETEGYHQ
121 AMLSLSTFDD AVFGLPFSVS LPVGYYNMDI LKAGGIESLP TTWDEVIAAC ETMKANGVQN
181 PVFWGWNITG NWFMQALMWS QDKAIVENGH VTLDSPEALA ALEQMQAIFT KCDMQNLDWK
241 AALASFSAGE IGMMFWSTSA LGAVERSQGD FDLVTGPFPG MDETPRGLPA GGNAAMLTST
301 SEDPRVQEAA WAWLKFITSG EGAAEVAKTT GYMPPNKAAN EIILADFYQQ NPNKQTAVDQ
361 LPLLRDWLAY PGDNGLAITQ VIYDGIERIV TGEAADMKAL QEELVEEVAD LLPNG
SEQDB ID: 3101377CQC
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPAVFNYTM AFTQAPLLRY LLNGVIVTVS IFVIQVAVAL PAAYALAKLR FWGREAVFGL
61 VLFCLLIPVH AIALPLYILL AKLGLTNTYA ALVVPWTISV FGIFLMRQFF MTVPDDLIDA
121 ARMDGMSEFA IVWRVMLPTA IPALLAFAIF SVVAHWNDYF WPRIVVTGNR DLFTPPLGLR
181 EFKGDGDGSF FGPMMATATV IVAPLIVAFL LAQRRFIEGI TLSGMK
SEQDB ID: 3101377CQD
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRPDDTGAR ARTAWGLTAP ALILMVLILL VPVTVAAILS FTDYALGNDS FAWVGWDNYQ
61 RLFTRSSYEK MFLATFTYVI TVVPLSVGLG LGAALLIQSL GRIGDLYKTI YFLPVMATLL
121 AMAIAWEFML HPTIGMVNRT LALACGGWAE ALPFFARGCA EGFPLWLGER ETALWVVCFI
181 GIWQGFGFNM VLYLAGLTGV HRELYHAAEM DGAKSAWERF RLVTWPALGP TTVFVVTISC
241 IRAFQVFDTI EAFWPQGGGP GKSAYVMMFA IFEKGVQQNL IGIGSAITVL FLVFVMFLTL
301 IQRWLVERKV HYG
SEQDB ID: 3101377CQE
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGLQIDRIE KSFGDTRVLR GISLDIADGE FVSLVGPSGC GKSTLLRIIA GLEHQSAGHI
61 RIGGRDVSGI RAAERNLSMV FQSYALYPHL SVGDNIAVPL RMRRLNAMQR LPLLGRYWPG
121 ARAANVDINQ AVSRAARTLE IDALLARKPG QLSGGQRQRV ALGRALVREP AAFLLDEPLS
181 NLDAKLRVQT RSEIAQLHRR LGATFVYVTH DQVEAMTMSS RIAVMMRGEI LQCAAPETIY
241 DDPDDIRVAE FIGSPRINVL PAEHRSGALS VLEHPLPLRV PPTTDQFLRI GLRPEALRLC
301 DPATAPLSGR VAHVENLGAE LFAQIAIDAE AERVVVKAAP ADRPRLALGT RLGLDFDPGA
361 AMVFDAAGKR LRRVTAARPR AGVVA
SEQDB ID: 3101377CQF
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPNHHQFVA FAYVVREGSF SAAAARLGVT QSTVTQHVAN LEQGVGAQLL LRGRDGVEVT
61 PTGRELYDLA DRLVAVDRAL AERLEGFASM RAGRLKVIAN APQPALRIIA AFTARFPEIR
121 IEFGLHDWTT ATGMIRSRMA DVGLITEAPE HDDWERLCLE STRYVLYCRA DSPLAGAGPL
181 RLADLGGQTM ILPEPGSLTE RLVSARLRAE GLRFARQVTM TTFPVMCEAV LQGVGVAIFL
241 QNSSLIRDGL AQVELVDFAG PQQTWLVATR DRARLRLIAE FTACALAAGA
SEQDB ID: 3101377CQG
Reference:
3101377
Name: Gln synthetase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPLIFAATC DLAGKVRGKG FPAEQRDKRL VRGVGWTPTN ALITCFDTIG NSRYGALGDL
61 LLIPDEDAEV ELSFGEVTEH FMLGDIVELD GSPWDLCTRA LLRGALDRLE ALSGTRLLAA
121 FEHEFQICGG PGPVGEAYGR GGFEAQRALC ETLMARLAQV GLSPDSIMKE YGPNQYEVVI
181 GPEIGLRAAD AAVILREITR SSARHLGQEA TFTPIRDPAS VGNGVHIHMS FLRADDSPAT
241 YDADGTCGMS ALTASFAAGV LKYLDSILAL TAPSVVSYLR LTPHRWSAAY NNLGFRDREA
301 ALRICPVTTR DPASVARQYN IEYRAADAAA CPHLALAAIV HAGCQGIEEG LSAPEPTEED
361 LSLLPPEALA ARGLVRLPQT LEEALERLGA NATVAGWFPE PLVPVYLAHK QAEIAHVAEL
421 DTSGRCAAYE ASY
SEQDB ID: 3101377CQH
Reference:
3101377
Name: transcriptional regulator, Isotype: RpiR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIRHAIEAH ADSLTQSERK LAAALLSDYP YAGLISIQEL AERAEVSAPS ITRFVAKIGL
61 SGYQEMQRRL ISELKEGDRS PVELHDGGTR IEGGYLDEFV ARAAAQLQSA RDAITEGQFS
121 RICALLGDPK RAVYALGGRI SDTIAQHLSF HLRQARQGVF HLPRDPETWP EYLLRMRPGD
181 VFFMVDFRRY QTNLARLAEQ AARDRKAHVV LMTDKWLSPA TRHASEVLAV PIETGTIWDS
241 YSAALAVTEA LATRVGEDNW DQTRARIEAW DAARGHARES
SEQDB ID: 3101377CQJ
Reference:
3101377
Name: For-Glu amidohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRINFHSMAI FLTLKKYFLY SGGMQAAAAP LLLTDADPAP VDLVQGDSTV PLLLVCEHAG
61 RAVPHALGDL GLAPGVLDSH RGWDIGAEAV ARAVAAELGA PLILQRYSRL VIDANRPPYS
121 VEAMPEVSDG AAVPGNRGLS ATARTSRIAE IFDPMDRQIA RLLDNPPRRA AFSIHSYTPN
181 LSGQVRPWHA GFLSRRSHAT AETLRDHIAD RRPDLVLAIN EPYRIEDATD WFIPVHAEAR
241 GLPHCLIEIR NDQIDSAPGA ALWAGLLAGA IAHVMESLT
SEQDB ID: 3101377CQK
Reference:
3101377
Name: isochorismatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLTRDLPLI PAQSALLFID VQNFSAHRKG AEFDGLDPAE FDAKYGWYFD QLDSRVIPNM
61 QAVQAACRAA GVEVMYTTIE SLTLDGRDRS LDYKITGFNV PKGSWDGKVI DQIAPEGDEI
121 VLPKGSSSVF VSTHIDYVLR NLGVRQLVIS GLITDQCVES AIRDACDLGY LVTQVSDACL
181 TYSQARHDNS LSAIKGYCRQ VTTQELVAEL ARA
SEQDB ID: 3101377CQL
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLELKGLSKS FGGVQAVRDV SMRLAAGQVH GLIGPNGAGK STLVNLISGL LSHSAGTLTL
61 DGRSLDGMSA ARRAECGIAR TFQNLRVFPA LTVEQNIDVA RYTAARAGRG ADALVAEAMV
121 QFDLDSRRNS RADALAYGQL RRLEIVRALA LAPRVLMLDE PAAGMNEQET QALGRALNWV
181 RGQTDCALLV IDHDLKFIMS LCERITVLNM GAVIAEGTPR EVSENRQVID AYLGEGNDHA
241 A
SEQDB ID: 3101377CQM
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKTSIAALA CVALASPALA ADTIKIGLGV PMTGDYAPYS EWQGARCMAD MINAKGGVNG
61 MKIEVLIQDS GADTQTAISL AQKFLDEGAV MLGTIPFSDT MIPVAQVAQG YGVSIFQPQS
121 TQVEMHAGIV DNFFTGVSPD PFTATAAANH ALSLGVKNVV LMTSDEGGSW SARTPLWFGD
181 VVEAGGGKVL SKLNFSFGTS DWSPQIAEMK ALGEQIDAVY ISSIMPDIAV LIRQMRSAGI
241 EAYVVGSDGF DDPSLDAIGT DDPAILDKVF FATLAPSHAD SAVVRFIAEC KEMGIDVPGL
301 FPATGADTVK AVAWAVEQSG STDPATLAET LRNADSIPVM SVDAISFKET RTYAQRTIPV
361 IGFEGGKRVL ISNEIPANTP TDWN
SEQDB ID: 3101377CQN
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: livF-1
Sequence:
1 MLNVTDLRVY HGPIEAVHGI TFQVKPGQCV SLLGPNGAGK TSTLSAITGI ARATGTIAFD
61 GTDMGGLPVE ARMRRGLAIS PEGRRVFANL TVSENLRLGA AMRPEGQAER IARWFDTFPI
121 LGERRDQQAG TLSGGEQQML AIARALMSEP RILLLDEPSL GLAPRIVAQI FAMIETLRQQ
181 GMTILLVEQN ATQALRLSDY AYLLNNGRIV AEGTAGTLGQ SDALMAELTG IG
SEQDB ID: 3101377CQP
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDYVAQQAMN ALSFGAEYAL LALGLAIVFS IMGLVNFAHG EIIAVGGYTM VAMAALALSN
61 PLIVIGAAVL AAVAGSMLLE RVAFRPVRYA DPTTGLLTAF GVSIVLQNLF LLLVSPRPIA
121 VTSLYFLDWP VDLGAIRVSS LQLFEALTTA VVIVALMLFL RRTVLGLAMR AASLDFEMVR
181 LSGIRANRVF AMAFAISGLL AGIACVFIMA RRGSVDPHLG FDPVLKAFVA CVVGGFGSLP
241 GAVLGGFLLG AVEVAMLVML PQSLGGMTDA FVFGIIAMVL IWRPDGILSP PVEKGDKI
SEQDB ID: 3101377CQQ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSRAQRRG IVGAALLALI LIAIGLAATW FGSRYQLRLV YGAYVNLLVV LALQVFMGNA
61 RVTNLSHSAF MGIGAYAAAI CVTPEKIKAI SLPDAPWGLN AFALDPVSSA LIALVLTGLV
121 AWLVGVFIVR LTGIGATIVS LAVLVIVHGL FLYRTDIFKG NQAFFGIPQL FNLTWVVGLA
181 VLVVFITRGF RESRWGVALR ASADDEVGAA AMGVDIHRLR LMAWVLSGVL LAVAGIAYAY
241 YLGTISARPF YFNHVFLTLA MLILGGMRTV TGAVLGTFLI SFGLEWVRWL ETGPVVLGID
301 LPEALGLSGI VLGGVIVLTM ALRPGGLMGD REIEDLILK
SEQDB ID: 3101377CQR
Reference:
3101377
Name: acetamidase/formamidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGCNHTIHKH SHHFGWDNSI EPVLRVTSGQ TIEIETIDSS GGQLGPGSTL ADLGALSFDK
61 VNPVTGPIHI DGAEPGDAVA ITFLDFKPSG WGWTANIPGF GLLSDQFPDP ALHIWSYDKV
121 AMRPALYGPG GQVPLKPFVG TIGLALAEAG NHSVVPPRRV GGNLDIRDNA VGTTLYLPVE
181 VAGGLLSLGD THAAQGDGEI CGTAIESPMD VAIKIDLLKG ADLAFPRFET EGPVSRHFDV
241 AGYRATTGIG PDLMQAARDA VSGMIDWISA TTGMSALDAY MLCSVCGDLR ISEIVDMPNW
301 TVSFYFPKTA LG
SEQDB ID: 3101377CQT
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTALTLSNVC KSFGPVDVLK NIDLTVDDSE FVVFVGPSGC GKSTLLRVIA GLEEATSGSI
61 DIGGQVVNAV PPAKRGIAMV FQSYALYPHL TVYGNMALGL KQAGHPKDEI ERRIAEAARM
121 LSLEAYLARR PSELSGGQRQ RVAIGRAIVR KPKLFLFDEP LSNLDAALRM NTRIEIANLH
181 RQLTASMIYV THDQTEAMTL ADKIVVLRDG RVEQVGSPLE LYNNPANRFV AEFIGSPAMN
241 FVAADRVGGP VGATLGIRPE HARIGDTGPL SGQVIHIEKL GGDTNVMLDL GQDSRFTVRV
301 FGQYEIDPGA EVKIDYDPAR TLLFSAEGKR LAG
SEQDB ID: 3101377CQU
Reference:
3101377
Name: oxidoreductase, Isotype: gfo/idh/MocA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRVLIAGLG NMGLSHALAH HHHPQARIVG LVNRSGMTDH PDLQAYPVFA DFHAALAETR
61 PDLAVIATYS DSHADFACAA MEAGAHVFVE KPLATTVADA RRVVDCATRT GRKLVVGYIL
121 RHHPSWQRLI AEARALGGPY VFRLNLNQQS DGPTWETHKA LMQTTSPIVD CGVHYVDVMC
181 QITDAAPVRV NGIGLRLSDE IAPDMYNYGQ FQVVFADGSV GWYEAGWGPM MSETAFFVKD
241 IISPNGAVSI TDGNKGASDD VDGHTRVGGL LVHRPGNDTL IELVGEPGHQ ELCDTEQAYM
301 LRAIAEDIDL TRHMSDAVQS LRICLAADHS IRTGAPVDLR ED
SEQDB ID: 3101377CQV
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNKARRNPAN TLAMHGALIV YTCIALFPVF VILINSFKTR KAIFREPLAL PDADSFSMIG
61 YQTVMKQGDF FLYFQNSMIV TVASLFFVLL FGAMAAFALS EYRFRGNTLM GLYLALGIMI
121 PIRIGTVAIL ELMVASGLVN TLWALILVYT AQGLPLAVFI LSEFMRQVSD DLKNAGRIDG
181 LSEYTIFFRL VLPLVRPAMA TVAVFNMIPI WNDLWFPLIL APAEETKTLT LGSQVFIGQF
241 VTDWNAVLSA LSMAILPVMV LYVIFSRQLI RGITSGAVK
SEQDB ID: 3101377CQW
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAGRIKWHV VVFLAPAVLV YTAIMIFPLF NTLRLALYSE ADQVRVFVGL DNFRRLFGDP
61 NWSGAFWNAL GNNFWFFFVH MLVQNPIGIA LAAILSHPRL RFAAFYRSAI FIPTILSFVI
121 VGFAWKLILS PIWGIAPDLL DAVGLKALFA PWLGKEEYAL TTLALISVWQ FVGIPMMLIY
181 AALLSIPEEI LEAAEVEGLT GMAAFWKIKL PLILPSIGII SILTFVGNFN AFDLIYAAQG
241 ALAGPNFATD ILGTFMYRTF FGFQLQLGDP HMGSAIATAM FAIILLGVCV YLFAIQTRIR
301 RYQF
SEQDB ID: 3101377CQX
Reference:
3101377
Name: sugar ABC transporter, Subunit: periplasmic sugar-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTKALSAIL LATTTLGGAA WAETTLTIES WRNDDLTLWQ DQIIPAFEAS NPGIKVKFTP
61 SAPAEYNAVL NAKLDAGSAG DLITCRPFDT SLGLYQNGHL ADLSDLDGMA NFSDVAKSAW
121 QTDDGAATFC VPMASVIHGF IYNKDAFAEL GLSVPETEAE FFDVLEKIKE DGSYIPMAMG
181 TNDQWEAATM GYNNIGPNYW KGEEGRLALL SGAQKLTDEA WVAPYRALAR WGSYLGDGYE
241 AQTYPDSQNL FTLGRAAIYP AGSWEITGFN AQADFEMGAF KPPVQNAGDK CYISDHTDIA
301 IGLNAASPNA EAARTFLNWV GSEEFANIYA NALPGFFSLS SFDVPMQDPL AQEFVSWRGE
361 CGSTIRSTYQ ILSRGTPNLE NETWNASVQV IKGAESPEDA GKRLQDGLAS WYDPQK
SEQDB ID: 3101377CQY
Reference:
3101377
Name: glucokinase regulator-related protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPQTERVRD EARGLDARPG PEILALLLHG QQAALDALNA CLPQIEAAAE IVAHGLRSGG
61 SLHYAAAGSS GLMALADGVE LPGTFGIAPE RIHIHMAGGV PTNTAMPGHT EDDAQEGEQA
121 ALKVNAGDVV IALSASGTTP YPTSFTRTAH ARGARIVAIA NNAEVPLFGL ADCAIHLPTP
181 PEVIAGSTRL GAATAQKAAL NMISTLMAIR LGHVHDGMMV NLIADNEKLR QRAQAIVTRI
241 VPGASARRAL DMAHGRVKEA ALIAAGAGSL ARATELLNQT GGHLRPALAD LQKDTDQGRE
301 NT
SEQDB ID: 3101377CR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAIDSYSRVV QYLKVLLPLT ALGLLSAVFL LSSRGTDSVA PIPFAEDEIA DRTRGQQITG
61 PFFTAVTPKG EQIQVQATLA RPGGENAPAE ATDLIAELLL LGGKRIRLTS DLGTVQLDKD
121 LAIFTGNVVI TTSDGLTVTT DQLNAGLSGI SGETPGNVRG TGPIGEFTAG SMQMGAENED
181 GPIHIRFKNG VKLLYDPKAA ER
SEQDB ID: 3101377CRA
Reference:
3101377
Name: BadF/BadG/BcrA/BcrD ATPase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRESRVPYLI AVDGGGTSCR FALQAGTTRH ELRLGSANVF SNRAGALRTL TEGLTRLVAQ
61 AGLPPDALAD IPVFAGLAGV IDEVAAKEVA AALPLRRVEV ADDRLPAVVG ALGARTGCLI
121 GVGTGSFLGR QDAQGIRLIG GHGWSLGDEA SGCWLGMALL RRCLWAQDGL EPETPLVATV
181 GGRIGVGSSA IVRFSAQASP SDYAALAPLV FQAADAGDPL GRALMQAGAD YLARGLRALG
241 WQPGEAICAL GGVAGRYASF LPAEMTDALA KPEGSALEGG LVLARRLAER NARGVV
SEQDB ID: 3101377CRB
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSDAIETIE TYLRPGAWVE DAAGPLYVRL RKRIEQGIDS GLLAKSAPLP AEREIASLTG
61 LSRVTVRRAM QELVDRGIIV QRQGSGSFVA DAAPRVEQSL SHLTSFTEDM ERRGLNVTSE
121 WLTRGVFIPS PEEVMALALS SGEQVARVAR LRRAEGRPMA IERASLPTDI LPDPELVSSS
181 LYAVLERDGN RPVRALQRIS AVNLGAEDAA LLGVEPGTAG LRIIRTSYLP NRRVIEYTRS
241 LYRADAYDFV AELRLGNS
SEQDB ID: 3101377CRC
Reference:
3101377
Name: SIS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQHITRMRR EIDEIPEAVQ RLLDHGAQDV ARVAAVLRLR DPSFVATVAR GSSDHVCTYL
61 SYAAELLLGL PVASLGPSVA SVYDARLRLD RALCLAVSQS GKSPDIVAMT RNAGRDGALC
121 VALTNDAASP LAGVSAHTID IHAGPELSVA ATKTFVTSAV AGLMLLADWA EDDGLRAALG
181 NLPETLAAAS RIDWPEMRVA IGARPSLFTL GRGTSLAVSN EAALKFKETC QLHAESYSSA
241 EVLHGPVSIV EEGFPVLGFA AGDAAEAPLA EIADQIAAKG ATVFATTGRV TRARVLEHVR
301 SGHALTDPLS LIVSFYSMVE AFASERGIDP DAPRHLNKVT ETV
SEQDB ID: 3101377CRD
Reference:
3101377
Name: GlcNAc 6-phosphate deacetylase, Class: EC3.5.1.25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nagA
Sequence:
1 MTLALSGARI LTPEGAVEGH ALLIEAGRIQ GIAPLGEIPA KARHLRLQGG WLAPGFVDLQ
61 VNGGGGVMLN NAPRLDSLRK MSEAHARIGA TTILPTLITD APEVVAAAIS AVEAAISSGV
121 PGIAGLHLEG PHLAPSRKGA HDPALIRPMD DEDLATLLEA ARRLPLLKVT LATESATPEQ
181 IRALSGAGVL VSLGHTDASF ADCRAAAEAG AACVTHLFNA QSQMGNREPG VVGAALALGT
241 LSAGIIADGI HVHPVSLRNA IRAKTGPGRV FLVSDSMATA GSDIAAFTLN GREIRRSGDR
301 LTLADGTLAG AHLELAQALC NVVEMAGLDV GEAVSMATRY PADLIGRSDL GRIAIGARAD
361 LVHLDEDLCL RRVWRDGLDL E
SEQDB ID: 3101377CRE
Reference:
3101377
Name: molybdopterin-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAPSAQPHI QHRSCNICEA MCGLIITHDG QDVLSIRPDP DDPLSRGHIC PKAVALQDFR
61 TDPDRVTRPL LKRGTDFEEI SWEAAFDHAA ERIRAVQAAH DRDAVGVYLG NPNAHKFANL
121 LNLPALVKAI GTSNRYSSAT ADQIPHHVAS IHMLGHPMLM PIPDIDRTDF LLIIGGNPVV
181 SNGSMMTAPG YGRRIDAIKA RGGRVVVIDP RRTETAERAG EHHFIRPESD AWLLMAMLYV
241 ILSDGPARLR HLEPLIDGLD RLNAAVAPFT PERAAQATGI GAHSIRQLAR DFAAAPRAAC
301 YARMGASTQS FGTLCQWATN ALNIVTGNFD REGGAMFTTP AVDYVGMTSR RGKARSYPER
361 RSRVSNQPLY NGEFPVSVLA EEIETPGPGQ IRALVTVAGN PVLTAPNGRR IERALQGLDF
421 MMSLDIHVND TTRHADLILP GTVALEETVY DMVFHTFAVR NTVGYAPPIF APPQDNPPEW
481 EVIARLTAKL TGANQIGPTP DQVLAVLLAQ GFHGESVSLA GLQQTGRPLD LGALVPNLAE
541 RLETPDGRLD LAPQAFLDDL PRLLASGDRH DPARPFTLIG RRQARSHNSW TQNSPRLVKG
601 RNRCTLEVNP ADAARLGLGE GDPARVTSAA GTVTLPVEIT DAMAPGVLSM PQGWGQKQGR
661 LTAATRTETV SINDLTDDSR TDPLSGNAAF NGLPVSLHPA
SEQDB ID: 3101377CRF
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic substrate-binding prote
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKNMIKGLLA ATALTAAAGL ASAETQGVTD DEVVIGAVND LSGIFAAVGV PATKGANVYF
61 DKVNAAGGVH GRKIRYVVED HGYQMPRAMQ GFNKLLNRDK VFAMMQNLGT PMNLAGFKLI
121 DPLGIPNIAP LSAARQMIQD PMQNKFTSFS SYFDQSVVGV KYLVAEYGAK NVCSMYLPTD
181 FGKEILEGTK AGAEEAGAAF VAETTHKPDE TDFVGSLSKL KESGCEIVTI ALGVRQAITI
241 VGTAKKMGLT DMQFMGTSAS FLTVVAQVPG GVTEGFYAAA SWQDLWARAD EPAPKAFIEE
301 YKAATGEDPQ GFAMLGYAAA QQMVMALEAA GRDLTHESFI AAMESLDYQD DLVGNHINYG
361 PDDHQGADSV YVLKVENGGW AKVHEE
SEQDB ID: 3101377CRG
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTRTLPAQT VINGVTFNAT PGQRPVLVDG TTTISALFQK RCAELGTRTA HREKDLGIWK
61 AYSWADYWQH AKWIGLALRK LGLKRGEVVS ILSEDRKEWA WFDMGIQAVG GIASGVYTTD
121 SANQLKYLIN DSDSRFLIAE NEEQLDKYLQ IEGEVPGLLN VIILEDEGLH DLNHPRCMMI
181 DRLYEIGREA EKEEPGAFEA EIAQIRPEDV ALLIYTSGTT GMPKGAMLTH ENIMAGIEAG
241 AHRLPTEETD EQLCFLPLCH ILERDVSIYF PLASKCTVNF AESPETVFAN LQEVSPATFT
301 AVPRVWEKIY SQVLILAQEA TPSGRAAFGM ALRAGMKRAQ YLVENKPVPA GVAANFWLWD
361 RLVLRNLRRM LGMDKMRRGG TGAAPISPEL LKWYWAIGVP LVEGYGMTET AGIATINTPE
421 ENRIGTIGRV VPGIDVRIAE GGEIQVRGLN IFKGYWRNNE KTAESFTDDG WLRTGDIGRM
481 DDDGYVTITG RLKDIIITAG GKNITPAEIE SRLKFSHYIS DAVIVGDKRK FLTCLIMIDQ
541 ENVEKFAQDR KVPFSNFASL CAAKEVRELI AAEVAQVNKE FARVEQIKDF RLIDVLLTAE
601 DDELTATMKL KRSFVEKKHA HLIEDMYK
SEQDB ID: 3101377CRH
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEPILKIRN IESFYGPIMA IRGVSLEVRP GQIVSILGAN GAGKTTLMKT ISGVMDPEKG
61 TITFDGEEIQ GSEPHKVVQK GIVHVPEGRE VFPLLTVDEN LSLGAYTATD KAQIERDRDL
121 VFTYFPILKE RRNQEAGTLS GGQQQMLAIG RGLMANPRIM LLDEPSLGLS PLLVQEIFAI
181 LKRLNEEQNM TMMLVEQNAS AALALADHGY VMEVGRIVMD GSAQSLMASE DIQNFYLGVQ
241 EEGARENRRW KRKKTWR
SEQDB ID: 3101377CRJ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLLELENVT LKFGGLTAVD NLSFSVEEGE VFAIVGPNGA GKSTVFNLIS RFYDPYAGQI
61 RFDGHNLLEV KPSGVAAYGV ARTFQNIELF EHATVLQNLL VGRHRHRRTN LFSEIFFTPS
121 ARRQEMENRE KVEEIIDFLD LQAYRDKYIA GLPYGVRKVV EVARALATDP KLLLLDEPAS
181 GLSVEETNDM RWWIDDIRRQ MGITVLMVEH DMGLVSGVSD RVLAMADGAK LALGTPAQVQ
241 SDPAVIEAYL GKAA
SEQDB ID: 3101377CRK
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIVFKTDYM QDIRPWKDGY QLGLYMILLA IVVAAPWLLD AFYLGELTNV LIWAIAGMGL
61 MVLTGHTGQA SLGHAAFLAF GCYANVILLE AGVPFIIAFP LAGVITGLIG ATVAIPALRL
121 HGIYLAIFTL ALSILVDDII VLSEPWTGGV SGKYVAGIDL FGLTIDRWGT PMLFYWLVLA
181 VTVIVALGYI NLLRSPLGRS FIAVRDSEVS AQAMGVDIAR AKTISFGLSC MVTGWAGAFM
241 GLFAGAFNNE TFSVVISIEL LMMIVIGGLG SIHGAFFGAI VIGFLPQFLS IAKEYVGAVF
301 GGSTVAIPGL EFGIFGMILI AFILLEPMGI YGRWLKIRTF FELFPFYRKD MFKRQKSYLK
361 TERLR
SEQDB ID: 3101377CRL
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDNVQLLISG LANGCVYGLI ALGFVLIYKA TESVNFAQGD FMMLGAFVTI GLTNTEYMGL
61 PFWLALPISI GIMAGLGYLL DRLVIRRMFG ESQTAVVILT IALGFVIRFA AGLIWGHEPQ
121 TLQNPLAGKE LSFGGLVLGL EDVAVIIVTL ALTGSLYLFF SRTKLGLAMQ GASQNQLAAY
181 YMGIPVKRVQ GFIWALAGAV AAVAGILFAA KGSVDPSTGL LGIKAFAAAV IGGFGSLPGA
241 LAGGLIVGVI EPFASRYIAA GYSQIAPYAL LVAVLVFRPH GLFSQVRVKK V
SEQDB ID: 3101377CRM
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDIPSTMFA VLQTGDGYSG KATGPAIADA ADWLEPGEIA VPQPGPGEAL IRLRMASVNP
61 SDLHFIKGEY GQPRVKGAPA GFEGCGDVVA AGAGAEGLVG QRVAFVAASS GAWAEYVLTK
121 AQMCIPLRPD ISDEDGSAQI VNPLTAMAMV DIARSEGEAF VVSAATSQLG KLMVSLGRDL
181 GLKPIALVRR AEAVEPLKAL GAAEVLVTSD PEMGQKFATI SRALKPRVFL DAVSDQTSER
241 IFTAMPNGAR WVSYGKLDAE LPVLTQMGQL IFMGKRIEGF WLTQWMMTTP PADQGRVVAE
301 VQARFADGRW KTDVSGHLPL RDVVSGLAEA LKKTDGKVMI TP
SEQDB ID: 3101377CRN
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTITNSPS RSERYEELLD AAAECFQSRG FDATSIDTVA RHLGATKGRV YHYFPSKMDL
61 FNAVRDRGMD LVFQATDPGY HADLPVLDRI EVMARGHVRA MLLHHSFMLV LKDGLLMRRY
121 TTTTEFQKES LAQHIARRDA YEARFRELLA MGLAEGSLRA GPDPAITVQT FMSALNGPVA
181 WFRPRACDTP QKYEAIVEEI VRFAMQGLRA HPS
SEQDB ID: 3101377CRP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTGTGPRYQ PRQVSDLGIR SVGPVRFKIW GLCAAGRDVA EEDLACAQHF LSDAVLPAVA
61 AQGDSDDLGF VIVHPGSAGL SIAAQWWVQG SVLCQRLFRR EYGAAQPVDT TARPVVACVW
121 ELSIINAEQE AWRHTMMVPQ PDPEAYLAAR GGLTAV
SEQDB ID: 3101377CRQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRILILIAL GAIAAGAYVF FTQGEQQTEA PQSSAVTPAE PITEAPAQTT TEADQGAAQT
61 ALEQAQSAAE QASEAAAEAV DQATSAVTET LNQVGEAASQ AAQGATDTAA QVVDQATQAA
121 SETATQAAEV ASNAVDATTE AANDAATAVG DQVAAAQTGA AELYKNWQDN GLLTQSGFDY
181 DKMVAGVEAS ALNETLKTGV LKVLSGIKAA PETISVQAQA LRALMAN
SEQDB ID: 3101377CRR
Reference:
3101377
Name: RNase BN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRSANPSLF LPLRAAWLAL MRFQAKSGFV MSSHVAMSMM MALFPFILFT VALAGSLSQD
61 LVTDDLIQLI FGTWPEQVAT PIVAELKAVL AGANSRVMTV GGVLAVYFAS NGVDAVREAM
121 SRAYHDAETR PFWKTRLLCI AIVVGGGAIV LAVAAFEVVM PIYTRLVTDA LPGAAPDWLS
181 VERLSWIFVV AMPAGAVLAC HALLPAGRHP LRRILPGVVL TLVLWAGCGW GFSLYIANFA
241 SYSTTYAGLA GAMAALIFLY LNAAILILGA EFNGALMDLS GGPD
SEQDB ID: 3101377CRT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVLSNGGRH ARLFALVYQQ ARAEAVDARL HVQPLNAGDA LSLLSRARAS FRPQRLDAGD
61 ARLARAGKQM FSGPFSETEN GARLAAKAGG HHKLFGTVRP
SEQDB ID: 3101377CRU
Reference:
3101377
Name: ribosomal RNA large subunit methyltransferase, Isotype: J, Class: EC2.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rrmJ
Sequence:
1 MAKNTSGRGQ RDLKVKVKTA RGRKLSSTRW LQRQLNDPYV KRAQAEGYRG RAAFKILELD
61 EKYRFLVPGA RVVDLGCAPG GWCQVAVKRV NALGERSDKR VGRVLGIDLQ EVEPIAGAEI
121 HQLDFLDDGA DDRIKEWLGG KADVVMSDMA ASSSGHKQTD HMRIIALCEA AAYLAFDVLE
181 EGGTFVAKVL AGGAEGDLQK LLKQKFTKVA NVKPPASRSD SSEKFVVATG FRG
SEQDB ID: 3101377CRV
Reference:
3101377
Name: phosphatase, Isotype: ppx/GppA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPKRPKGAG AFPKAVESPA PNRPDPDALY AALDLGTNSC RMLIAQPKGS GFHVVDSFSK
61 SVQLGAGLER TGRLSRSSMA RTIQALRICQ QKIKRNKVHR MRLVATEACR RAKNAREFIR
121 DVRRETGLTL EIIQPEEEAR LAVISCAPLV STRSEQLLVV DIGGGSTELV WIDLTSVPRR
181 DRPSAIMRLH AGFHPPESPF PAAKVVDWIS VPLGVATLRD QFNDVEDDSA RFALMSWFFE
241 EQLADFAPYS SPLGRDRFQI VGTSGTVTTV AASHLGLKRY DRTKVDGLRM TSEQIDKVIR
301 GYLDLGPQGR RRDPRIGEDR HALIMSGSAI LQALLRCWPT DRLSVADRGL REGLLYAQMS
361 ADGVLEDGPF
SEQDB ID: 3101377CRW
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKNDRTLTFD EFDEAVNPRP EDCDFDQVVE EALSRRGFLG GVLAMGGFAA LGGAVLPRGA
61 EAASNRFAFE AVAASTADEI VVPKGFKADV LVRWADPLWS DGVAFDQVTR GTAASQARAF
121 GDNTDGMEVF HHEGRTLLVV NNEYTNREII WGNRAEGKAE TDDDVEKGLL AHGVTVVELA
181 HDGAHWQVVT DSPYNRRITP RTEMALTGPA AGHDLMKTAA DPTGTVTFGT WNNCGSGTTP
241 WGTYLACEEN FNGYFSAADE AHEVSAELNR YGVSAKDWGY GWARVDDRFD VAKNPNEPNR
301 AGYVVEIDPR DPNSTPKKRT ALGRFKHENA ECVVNRDGRL VIYMGDDERG EFLYRYVSNG
361 VYAAGVDTDE LMENGTLYAA KFDASGKGIW LALTPEATGM SQAEICIHTR IAASKLGATT
421 MDRPEWVTAN PNADEVYCAL TNNKNRGVKP NRGGDDTPAE GPNPREKNNY GQIVRWRPEG
481 GDHSAEGFDW DLFVLAGNPT VHSDANAGSE NVNAGNMFNS PDGLAFDSNG LLWIQTDGKY
541 SNEGDFAGQG NNQMLAGDPV TGEIRRFLVG PREAEITGLC WSGDRRTMFV GVQHPGEEGD
601 SHWPDGGDSV PRSAIIAVTR EDGGVIG
SEQDB ID: 3101377CRX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEVTIVYWR DIPAQVIVGK GRRGAKRQLE ERFEQAIDRA AMKVGAQDTD AYLAEWRKAE
61 PYEVAGDPAD IVEAEAQRLE REYDRDRIKA LIANDGWA
SEQDB ID: 3101377CRY
Reference:
3101377
Name: metF-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALLNFKKRE TVENGPVNPT VEAFLKDYSI EVMPRTAEKV EDFRALLPEG TRVYIAHIEG
61 TPIEDMVATA KRLAAEGYPV MPHFPARIIK DAKTLENWIA MYQGEAGVDQ ALLLAGGVAA
121 PHGDFHCSMQ LMETGLFDKA GFKRLHVAGH PEGNKDIDPK GGDANVMDAL RWKQKFSETT
181 DAQMALATQF CFEAKPIIAW ADGLKAAGID LPIHIGIAGP AKLQTLIKFA IACGVGPSLK
241 VLQKRAMDVS KLLLPYEPND VVTELAAHKA ANPDFNITNV HFFPLGGIKT NATWAINNGG
301 ASTRPVNPT
SEQDB ID: 3101377CT
Reference:
3101377
Name: arabinose 5-phosphate isomerase, Class: EC5.3.1.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kdsD
Sequence:
1 MTDRSSFIDT ARQVVLDEAR ALDALSESLG DGFAEAVELI LRTKGRVIVS GIGKSGHIGH
61 KIAATLASTG TPAYFVHPAE ASHGDLGMLS GDDVVLAISN SGEAPELANL LAFTRRFAIP
121 LIGLSSKSES SLMQQADVHL LIPALGEACG FGMVPSISTT LTLAMGDALA IALMKYRDFR
181 PENFRVFHPG GKLGARLSRV SDLMHGGEAV PLIAADTPMS EALLEISRKG FGVVGVTDGA
241 GHLAGIVTDG DLRRHMSGLL DKTAAQVMTA NPTTIAPDSL AEEAVAIMNA RKITSLFVVD
301 PAEPGVARGL LHIHDCLRVG LG
SEQDB ID: 3101377CTA
Reference:
3101377
Name: pterin-binding enzyme domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRTIVESKT KTAIIGFDQP FCVIGERINP TGRKKLAAEL EAGDFSTVEK DAIAQVAAGA
61 TVLDINAGVV YNSNPNPNET EPPLMRKIVE LVQGLVDVPL CIDSSVPGAL EAGLAAAEGR
121 PLLNSVTGEE ERLEQILPLV KKYNVPVVAI SNDDTGISED PDVRFAVAKK IVERAADFGI
181 PAHDIVVDPL VMPIGAMATA GQQVFALVRR LREELGVNTT CGASNISFGL PNRHGINNAF
241 LPMAMGAGMT SAIMNPVALP VTQKAIAEKR AAVTAAGIIL PEGMDDETFV QMFGLGSTLS
301 RAGKEMEAIR AANLLTNNDA HGAEWIRFNK PPAAEGEESR GRGGRAGSRR RRA
SEQDB ID: 3101377CTB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHTNKVIRS INLDGETICV DLFQRPDGTY GFDEFRRDPE DGRGWYSIGH HGAASFETFE
61 HALAEAKANV SWLQDALCE
SEQDB ID: 3101377CTC
Reference:
3101377
Name: transketolase, Class: EC2.2.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tkt
Sequence:
1 MDLTALRTAN PDHWTKATAI RALTLDAIAA ANSGHSGMPM GMADVATVLF EKHLKFDAAN
61 PTWPDRDRFI LSAGHGSMLL YSLLYLTGNP EITLDEVKNF RQMGAKTAGH PENFLAKGIE
121 TTTGPLGQGI SNAVGFAIAE EIQRAQYGKK VVDHYTYVIA GDGCLMEGVS QEAIGLAGRL
181 ELSKLVVLWD NNNITIDGTV DIADRTDQVR RFAASGWHVI EIDGHDPAAI DAALTQAKGS
241 KKPTMIACKT HIALGHAAQD TSKGHGALTD QGQLLAAKEG YGWAHGPFEV PSDVKSAWEA
301 IGSRGAAERA AWEARFAELS ERKQAEFTRA YAFEAPKKLA GAIRALKKQV SEDQPKWATR
361 KSSEEVLKVV NPIMTETVGG SADLTGSNNT KTADLGIFLP ENRKGRYIHW GIREHGMAAA
421 MNGMALHGGI RPYGGTFMCF TDYARPAMRL AALMKIPSVF VMTHDSIGLG EDGPTHQPVE
481 HLAISRATPN TYVFRPADTV ETAEAWELAL TFQNSPSVLS LTRQNLPTLR TEHKVKNLTA
541 QGGYVLAEAT GKRQVILIAT GSEVEIAMQA RATLEAEGIG TRVVSMPCME LFAEQDEAYR
601 KRVLPAGPVR VGIEAAMRAG GWDRWLLGER GREAKAGFVG MTGFGASAPA EELYEKFGIT
661 AAATVAKVKD LLG
SEQDB ID: 3101377CTD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQIEELHSR ISAAMERIGA GVEALAMPQE AAPPSEPTGA DSDLAAALED ERLANAQLQE
61 RLKSIKAKHA AEIEALKAES AEAPVTAAED GELEQLKADL AEATAKLMAA EAARAELAEA
121 KATLEAEDQS TLLRAEIDAL KAELDAVEDV DALKAEIEEL RAQASDSAIE DELRTEIAAL
181 KAELGQSERV SELSAELEML RAERVSHGAA MSQLDGDLQR LRKANDQLRK ALADLRAANE
241 AGVGEPHLIN AAMLAELEAL RAQRATDAAE VQAVLSKLGP LLTSANLTEG EDE
SEQDB ID: 3101377CTE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEVTIHIGG RAFEVSCQEG EESFLQSAAK MLDDEAQVLS DQIGRMPEAR MLLMAGLMLA
61 DKTAAVEDKI GVVEARLAER EAELEALKAA PAPEPERVEV AVIPPSVTDT LAELAARAEA
121 LADRVEEKAA G
SEQDB ID: 3101377CTF
Reference:
3101377
Name: glutaredoxin-related protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDAKTRIDE TVKANDVVLY MKGTKEMPQC GFSSRVAGVL NYMGVAYADV NVLADDEIRQ
61 GIKDYSDWPT IPQLYVKGEF VGGCDIITEM TLSGELDTLF EENGVAYDKD AADKIRAANA
SEQDB ID: 3101377CTG
Reference:
3101377
Name: BolA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAMEAHEIEA LIRASFPKAK ITITDLAGDG NHWAAEVVDE SFRGQSRIQQ QRAVNAAVKP
61 EIDSGKLHAL ALTTKAPA
SEQDB ID: 3101377CTH
Reference:
3101377
Name: phosphoribosylformylglycinamidine synthase, Isotype: II, Class: EC6.3.5.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purL
Sequence:
1 MQEPAITPDL IAAHGLKPEE YDMILEIIGR EPTFTELGIF SAMWNEHCSY KSSKKWLRTL
61 PTSGPQVICG PGENAGVVDI GDGQAVVFKM ESHNHPSYIE PYQGAATGVG GILRDVFTMG
121 ARPIASMNAL SFGEPSHPKT RQLVNGVVEG IGGYGNCFGV PCVGGEVRFH PAYNGNCLVN
181 AFAAGLADSD KIFYSAASGV GMPVVYLGAK TGRDGVGGAT MASAEFDDTI EEKRPTVQVG
241 DPFTEKRLME ATLELMQTGA VISIQDMGAA GLTCSAVEMG DKGGLGVRLD LENVPQREEN
301 MTAYEMMLSE SQERMLMVLK PELEAEARAV FEKWDLDFAI VGETIAEDRF LIMHHGEVKA
361 DLVLSKLSST APEYDRPWVP TPAAEPLAEV PQIDPIDGLR ALLASPNYGG KQWVYEQYDT
421 MVMADSARTP GLGAGIVRVH GTDKALAFTS DVTPRYVRAN PEEGGKQAVA EAYRNLTAVG
481 ARPLATTDNL NFGNPEKPEI MGQFVGAIKG IGAACAALDM PIVSGNVSLY NETDGTAILP
541 TPTIGAVGLL ASTDEIIGKE VREGHVALVV GETTGHLGQS ALLAEVFNRE DGDAPHVDLE
601 AERRNGDFIR ANRALIKACT DLGDGGLALA AFELAEGAGV GLHLDDAPTE ILFGEDQARY
661 LVACNFDQAE ALMSAAGQTG VTVTSVGRFT GDTVRIGGSE ALLADLAATF RASFAAAVA
SEQDB ID: 3101377CTJ
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQFMKPLLK VLALLAALIS ISAPLSAQVP LPSSGGGAAA APTVPDDLTP DQVDGLVARL
61 SDDQVRALLL ERLDAVAQAA QVQPEPRKGP IARVGDAAKA MIASWLDAVR KVPLLVSKQA
121 EALSNFSAKL GGSGIATLFG YTLLALAIGF AAEKLAVYVT RSWIKADPGS AADNLRGAVS
181 FLFRRFCREV LGLVVFYYVL VFVGRRLLEP EQIAYAAPFV LYLIWLPRLG AAISRFILAP
241 NRADLRLVNA SDHWARFLHR NQIGLFLLIG FTLFIVTFNN LNGVAMGEMR LGFWLNTSIH
301 VYIALIAWTA RSGLTEMMRG DDPDRTRFDD KIATYYPYFA IAVSAVVWLI VEYFVAIQEI
361 PVLRNIGAGA HYTTMFWLLM APAIDTLIRG LVRHLQPPII GTGAIAEQAY RATKRSYIRI
421 GRVLAGIFVI LMIANAWQID LRQVAGAGTD LGGAVIQFLM IAAVGYILNE MVSLWINRQL
481 AREQTAANQS PDEEAGEGGG AGGSRLATVL PLLRMTAQAA IAVIFALLAL GALGLDITPL
541 LAGAGILGLA IGFGAQKLVA DIVGGVFFLI DDAFRVGEYV DVGGTTGTVE KISIRSMQLR
601 HHRGPVHTIP YGEIAKLTNF SRDWVIMKLK FTVPFDTDPN KVKKIFKKIG AEMMADPTHA
661 EGFLQPFKSQ GVFDFDDVGM IIRGKFMAKP GKQFTLRKEI FNKVKAEFKA NGIDFARREV
721 RVAIPGLDEA EHMTPEQKSA VAAAAASQTA NEQAPGS
SEQDB ID: 3101377CTK
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGRVKKVAD MDWDKLRIFH AVADAGSLTH AGDRLNLSQS AVSRQIRALE ESLNATLFHR
61 HARGLILTEQ GELLFDATKS MAKRLDAAAA RIRDSEEEVF GELRVTTTFG FGTLWLAPRL
121 AALYQKYPDL KVDLMLEERV LDLPMREADV AIRMKEPSQA DLIRKRLMTV EMKLYATRAY
181 LDSAGTPQDI SDISAHRLIC QNISAAQVGA SAVLVQHLLA YNPSSLLTVN NYFGVLQGVL
241 HNLGIGVLPD YVTQDFPDLI HVLPDIKSAL VPVYLAYPEE LRHSQRVAAF RDFVQEEIIA
301 HRKQLRELGI L
SEQDB ID: 3101377CTL
Reference:
3101377
Name: pyruvate ferredoxin/flavodoxin oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQPKLTLND KFDLEKSPVL LNGTQALVRL MLMQKARDAA AGLNTAGLVT GYRGSPLGAV
61 DLQMSRAKKQ LNASDVTFQF GLNEDLAATA LWGSQQAGLR GDGKYDGVFG LWYGKGPGVD
121 RSGDVMRHAN MAGTATHGGV LMAMGDDHTG ESSTVLHQSE WALVDAYMPV VSPAGVQEIL
181 DYGIYGYALS RFSGLWVGLK TMKDTIEVTS VVDGRPDRMQ VVIPEFDMPE GGLNIRLGDT
241 PHLQEGRIID YKRFAAEAFS RANRMDKRVW GKPGAKIGIV AAGKNWLDLV HAMSLLNIDE
301 NEAERLGITT YKVGQTFPLD MQSFHDWAED LDLVVIVEEK RKLIEVQVKE AIFDDRQGRR
361 VYGWYKGGAG ALHRDELFPT RGALDPILIA EKLGGILIEE GRETDGIRAG LNALADARRN
421 DNAQEIASRL PYFCSGCPHN SSTKVPDGSR AYAGIGCHYM VQWMDRNTQG FTHMGGEGAN
481 WIGEAPFSKT KHVFQNLGDG TYNHSGVQAI RAALAAGTNI TYKILFNDAV AMTGGQENEG
541 DLSAPRIVAE LKAMGVKELA VVYDDKEDVD RSQFPSGIPF HERAELMQVQ KRFREIAGVS
601 AIVYIQTCAA EKRRRRKRGT FPDPDKRAFI NTDICEGCGD CGVQSNCVSI VPKETELGRK
661 RAIDQSSCNK DFSCVKGFCP SFVTVQGAKI RKEATAEIDL PDLPMPDLPA ITGTHNVVIT
721 GVGGTGVVTI GAVLAQAAQI DGKGAGMMEM AGLAQKGGAV HIHCRIANRP EDISAIRVAT
781 GEAHALIGGD LVVSAGAKTL GLTRTGTTGA VVNSHEIITG DFTRNTEFTI PADRLSLALE
841 ARLKERLDLF DASELARAVM GDSIYSNMMV FGAAWQRGLL PVSHEAIMQA IELNGAAVER
901 NKRAFDIGRW AVLHPDEATR LIRPGVVELS KSPEDKIAYR AEHLTAYQGA RLAKRYRKLV
961 DGIEDGDLRM AVAEGYHKLL SYKDEYEVAR LLLDSRDKAA AEFDGDLKLT LHLAPPILGG
1021 KDADGRPKKR EFSERWLGLF KLLARMKGLR GTPLDLFGYT AERKMERALI RQYEKDLREV
1081 LPRLDTRTRE AIVALARLPL DIRGFGPVKM ANEAKAAKRR EELLAVIRQG GPALAKAAE
SEQDB ID: 3101377CTM
Reference:
3101377
Name: acyltransferase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAQRHIARD ISYAHSAATK GGRVVIRLME NTTGRLNLIR RAQGYEQEVA RGRDFWAVMV
61 ERYGLTLDVV GGALSNIPQD GPLILIANHP YGILDGLMMG HILAQTRGDF RIMAHRVFRK
121 AEDINRIILP ISFDETREAV QLNLDTRRQA LSYLGQGGAI GIFPGGTVST ALHPFSHPMD
181 PGWRGFTARM VAKSNAVVVP VFFDGHTSRL FQIASHLHST LRMGLLLKEF RKRMDTPVRV
241 VVGQPIGRDI LDPLARDTRK MMDFLRKATY ELSPTPLKSY DYGYEFEERH RA
SEQDB ID: 3101377CTN
Reference:
3101377
Name: Glu racemase, Class: EC5.1.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murI
Sequence:
1 MAVGIFDSGL GGLTVLEAAQ KRLPEVEFLY YADSAHAPYG VRTPDDIFQL TRAAVHDLWN
61 RGCDLVILAC NTASAAALRR MQEEGVPPGK RVLGVFVPLI EALTERQWGD NSPPREVEVK
121 NVALFATPAT VASRAFQREL AFRAIGVDVE AQACGGVVDA IEEGDLILAE ALVRSHVDAL
181 KRKMPYPQAA ILGCTHYPLM EPIFQDALGP DVRVFSQGNL VADSLADYLE RHPNMRGSGA
241 AGYLTTGKPA TVSNRATQFL RRQITFAAA
SEQDB ID: 3101377CTP
Reference:
3101377
Name: Ac-gamma-Glu-phosphate reductase, Class: EC1.2.1.38
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argC-2
Sequence:
1 MTHKIAILGA SGYTGAELVR LIAEHPNMEI VALSGERKAG QSMAEVFPHL RHLDLPVLCK
61 IDEIDFAGVD LCFCALPHKT SQEVIRALPA TLKIVDLSAD FRLRDPEAYR TWYGNEHVAL
121 EQQAEAVYGL TEFYRDQIRT ARLVAGTGCN AATGQYVLRP LIAAGVIDLD EIILDLKCAV
181 SGAGRSLKEN LLHAELSEGA NAYAVGGTHR HLGEFDQEFS ALAGRPVQVQ FTPHLIPANR
241 GILATTYVRG DAQTVFQTLA AAYADEPFVH VLPFGETPST HHVRGSNHCH IGVTGDRIAG
301 RAIVIAALDN LTKGSSGQAL QNANLMLGET ETTGLTMAPL FP
SEQDB ID: 3101377CTQ
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CcmE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccmE
Sequence:
1 MKSLKKQRRI QVIILATVAL VLATGLIGYA MRDGINFFRA PSDIIAEPPQ PSETFRIGGL
61 VEDGTLVRGQ GETVRFSVTD GGASVPVVFT GVLPDLFAEN QGMIGTGRYV NGVFEASEIL
121 AKHDETYMPK EVMDALKEQG VYQAPES
SEQDB ID: 3101377CTR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTVRQIAQE IVAREGGFVN DPDDPGGATN FGVTIHTMRR LGMDITGDGA VDVADVRALS
61 REQAVEIFLT HYYARPRIGE MPEAVQASLF DMYVNAGGNA VKILQRLLRD MGYEVSVDGA
121 IGPQTLRAAQ DAATPRPEAL RDAYGVARRN YYFRLADRRP ASRKYARTRA GGKGGWIKRA
181 EEFMAPEYRL SDAEFQRRVS GWD
SEQDB ID: 3101377CTT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEFRNHDPR YRPRPTHRQS LSPGSAAHSV APSGPFQAAP VLQRGVFLGG RRCQRQARIG
61 SGIGNAGAVM AQGAQGADVL DRLWHAGHGG GQIALEILSL GLVAGAEIEG HDDAQQPPQR
121 FGHQRQALHP FPKPDRIGHR RDKEAQRPQR QCRARQPVQP VHEPVEPATP ALREFRRELV
181 QRAHLYLGRA RRPGLGILAE HLDRFAHRVA ATAKQHSQQI ADQSHPETLR
SEQDB ID: 3101377CTU
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CcmF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccmF
Sequence:
1 MITELGHFAL ILAFMVAIVQ MVVPLIGAHK RWPGWMALAE PAAGAQFLLT AFAFAALVWA
61 FVTSDFSLRL VVLNSHSAKP MLYKISGTWG NHEGSMLLWV LIVTLFGAMA AWFGGGLPPT
121 LKARVLAVQS AIAVAFFAFI LFTSNPFLRL AVPPFDGQDL NPLLQDPGLA FHPPFLYLGY
181 VGLSMAFSFA VAALIEGRVD AAWGRWVRPW TLAAWIFLTI GIALGSWWAY YELGWGGFWF
241 WDPVENASFM PWLLAAALLH SAIVVEKREA LKSWTILLAI LAFGFSLIGT FIVRSGLLTS
301 VHAFANDPER GVFILIILGL FTGGALTLFA ARAQAMEAKG VFSMVSRESA LVLNNILLAV
361 SAFVVFFGTL WPILAEMFFD RKLSVGAPFF NAAFTPFMVA LGVVLPLGAM LPWKRGKLGR
421 VAHSLRYAFV LALALAILVW VMQTGRSALG PVGLFLGAWI TFGAIVDLWS RTGRSGSVAR
481 LFRLPRADWG KAVAHSGLGV TMFAIAGLMA WEVEDIRVAR LGEPFEVGGF TLTLDGVERV
541 QGPNYISTMG SVRLEQAGRA IDTLHPEKRD YPVARMPTTE AAIDYRILRD VYVVIGDQQD
601 DGGWTIRTYI KPFANWIWGG CILMALGGAL SLSDRRFRVA AGARKAPAGG VPAE
SEQDB ID: 3101377CTV
Reference:
3101377
Name: cytochrome c biogenesis family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRLILILSL IASPLWAVQP DEVLDDPALE SRARSLSEGL RCLVCRNESI DESNAELARD
61 LRLLLRERLV AGDSDEQAVA YIVDRYGEYV LLKPTATGAN WLLWLAGPLM LLAAAGMGWG
121 FVRGRATAAP ATETALNPEE QERLRRILEE
SEQDB ID: 3101377CTW
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQYDTISLDI ADGLAVLTLN RPDKMNALTS RMRAEITHAM KAAAREARAI VLTGAGRAFC
61 TGQDLGDAGS SGKIDLERTL RDEYNPMLEA IYDCPVPTIA AVNGPAAGAG ANLALCADVV
121 IATESAYFLQ AFARIGLMPD AGGTWFLPRQ MGLAKAMGAA LFADKIDARQ AEAWGMIWEA
181 VPDAEFDAQW RKRAAYLANG PTAAFANIKK AIRGSYGTAL PDQLAAEAHL QGECGRSRDF
241 QEGVVAFMEK RAAKFEGR
SEQDB ID: 3101377CTX
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVPSHSPDA AVLEHLTGRS RGLYSWITSD QVALLLDRDG LLRVQAPGDL DVEGELIARV
61 RRQEGVFHLI TAPGARVWVN RQPVEAADLT HGDVIEFGEQ GPLSRLRIYD ERRRPHPTLV
121 EMLSDALSYL RTSRRPLLAR LPRAAGLFLG RFLGNGALMF RGLVLLGLVA LAALAIWQIR
181 ADRALRAQYE SGRFQVEALA SALAEARREA IRPGDLDALQ DEIGIRLQLN AERLDTLEER
241 SSAATRVIST AAGSVAFIQG GYGLRHRDSG QMLRHVLGAG GNRLMLPNGQ PMLSLEGDGP
301 VAEVQYTGTG FVLAETGLIA TNRHVAVPWE KSAAMGFGGD TMEPVFTRFI AYFPGRADPI
361 DLVVRGLSDS ADLALVAPAA PVELPPGLPL AEAAPPPGLE VLVMGYPTGL MSMLARSGTG
421 FVEELRGAGI TGFWEVAARL AGEGLIWPLA SRGIVGQVTP ALVTYDAETT HGGSGGPVLT
481 LRGQVVAVNT AILPDFGGSN LGVPVARLRA LLNAPTD
SEQDB ID: 3101377CTY
Reference:
3101377
Name: Hcy S-methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNVFAEMLA SHDVLLADGA TGTNLFAMGL QSGDAPELWN TDEPDKIRAL YQGSVQAGSD
61 LFLTNTFGGT AARLKLHEAQ GRVRELNRVG AELGREVADR AGRKVIVAGS VGPTGEIMEP
121 VGSLSHAAAV EMFHEQAEGL KEGGVDVLWL ETISAPEEFR AAAEAFALAG MPWCGTMSFD
181 TAGRTMMGVT SADMAQLVET LPNPPLAFGA NCGTGASDIL RTVLGFVAQG TERAIISKGN
241 AGIPKYVDGH IHYDGTPELM GVYATMARDA GAKIIGGCCG TMPAHLTAMR AALDSTPRGE
301 RPTLEEIVDK IGPFTSASDG TGDDAGPERR ARGGRRRRA
SEQDB ID: 3101377CU
Reference:
3101377
Name: exonuclease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANHLYKNDL PDGLDLGPVV AIDCETMGLN PHRDRLCVIQ MSGGDGNTHI VQVEKGQTAA
61 PNLCAMLENP EVLKLFHFGR FDIAALYHAF GALTAPVYCT KIASRLVRTY TDRHGLKNLC
121 QELLGVDISK QQQMSDWGAE TLSEAQLDYA ASDVLYLHRL REALDGRLAR EGRADLAQSC
181 FDFLPTRARL DLVGWPETDI FAHS
SEQDB ID: 3101377CUA
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKGCAASLW PTAIGPRMPR PLSLLPRPAG LMLRLVGSLV LTLWLVWLLA DRLALLAPGE
61 VIAALSGLPV WRLAAALLAT AVSFWALGRY DGVAHRHFRT GLAARQARLC GMAAIGFSQF
121 VGCGVLSGSF ARWRMIGDLT PALALRLTTF VAITFLLALA FWASALCLIA PPLPGLRQTG
181 VAGLALLLPI TLVLFLLPRL RLGRFTLRLP SLRALGAILG WAALDLAAAA AVLWVLLPAL
241 SWTDLPLLMS AYVLALAAGL LSGAPGGLGA FELTLLALLP AIPGAELMAA VLAYRLIYVA
301 LPALAAVPLL LSPPDLRLGR QHRLPRRIHH HPPARPRAET AVVTQSRGYV LSGGFADMAV
361 VETDQSLIML FDPVCGGRHP DLYLLARRAA QRNLFALVYK CSARVAVSAR RAGWRVRHVS
421 DEATLVPADF TIAGSHRRQL RRKLRQAERA GLTVRRASTL PLTQMAAVDR LWQEANGRAW
481 GLTMGRFAPD YLARQAVFLA WRGARLEGFV SFHRSRDEWC LDLMRTHPDA PEGTMHALVA
541 TALAATAAAR VPRLSLAAVP AGRLGHRFDG LRQFKDSFAP RWQPLYMAAP GWTAIALAAA
601 DLARHVQAPP PLAAPDAQPA HDLDEEIEFA SLTGT
SEQDB ID: 3101377CUB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTFDDREHA FEAKFAHDEE MQFKAQARCN KMLGLWAAGL MGKTGDEADA YAKTVVIADF
61 EEAGHEDVVR KVEADLDGLA DADTIRAKMA ELLPEAKAQI MGEAG
SEQDB ID: 3101377CUC
Reference:
3101377
Name: phosphoribosylaminoimidazole-succinocarboxamide synthase, Class: EC6.3.2.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purC
Sequence:
1 MARRTKIYEG KAKILYEGPE PGTIVQYFKD DATAFNAQKK DVIEGKGVLN NRLSEYFMTG
61 LAQIGVPTHF IRRLNMREQL VRACEIVPLE VIVRNFAAGT MSKRLGIEEG TQLPRPIVEY
121 CLKNDELGDP LVTEEHIAAF GWASQQDMDD ILSLALRVND YLSGLMYGVG IKLVDFKIEI
181 GRVYENDYPR LIIADEISPD SCRLWDIATG QKLDKDVFRR DLGSLTDAYS EVARRLGVIP
241 KTQIAKPTLI N
SEQDB ID: 3101377CUD
Reference:
3101377
Name: phosphoribosylformylglycinamidine synthase, Isotype: PurS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purS
Sequence:
1 MKARVHVMLK NGVLDPQGEA VRHALGAMGF DKVTGVRQGK VIDLDLVEGA TEADVAEMCE
61 KLLANTVIER YEIELV
SEQDB ID: 3101377CUE
Reference:
3101377
Name: Zn alcohol dehydrogenase, Class: EC1.1.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAAQLTAWR QPLTLATLPD PTPGPGEVVL RVLACGVCRS DWHAWTGADP DVELPLVPGH
61 EFCGEVVALG TGVSRWRLGD RVIAPFILAC GRCGDCAAGH QTICANQQVP GFTRNGAFAE
121 LIAVPFADTN LTALPDSLPP HVAAGLGCRV TTAWQALVGR AELRPGEWLA VFGGGGVGLS
181 ALLLGRALGA RVVVVDVVED KLTHAKSLGA DAVVNAADTD AAEAVRELTG GGAHVAVEAL
241 GIAATMTGAM RSLRKLGRLV MIGMPAGEHT AMTLPMDVLY SGQLTLQGTR GMPAWRYPSL
301 LSLIDGGHVD LSPLVTRTIA LSQASDELAA FDRPAPPGVA VITDFAT
SEQDB ID: 3101377CUF
Reference:
3101377
Name: phosphoribosylformylglycinamidine synthase, Isotype: I, Class: EC6.3.5.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purQ
Sequence:
1 MRAAVVVFPG SNCDRDLAVA FEQAGFDVSM VWHKDADLPQ GIDIVGIPGG FSYGDYLRCG
61 AIAAQSPICK AVVAHTARGG YALGVCNGFQ VLTETGILPG ALLRNAGLKY ICKTVGLKVE
121 TSNSVFTEGY NAGDVIGIPI AHHDGNYYAD DETLAALKAE DRIAFTYTDN PNGARDDIAG
181 ILSANRRVLG MMPHPERAAD AGHGGTDGVA LFRALAGALT PA
SEQDB ID: 3101377CUG
Reference:
3101377
Name: C4-dicarboxylate transport sensor protein, Isotype: DctB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTPRTDPKG QSWIRSGQLS WRVRAALVLV LVSATATVWI TNRLLTDRFT ESTRNRAELR
61 LALYSGNLLS ELRRNAIVPQ LLARDPTLIA ALQSSDFSQS TQRLISFVEE IGAASLMLLD
121 RDGRTVAATD RNRLGEQHRS AAYFVDPVRS NATVFSTIQR EAGGYSFTYS RRLEDSSGVL
181 GVIVVEVDLQ KFERAWSGIS DAVFVTNSAG TIILATEPRW RGLNQAEALR RQTPENAIER
241 AIRATADWTA LPADAYLRGE AVMRMDSRIP FRGWQMTSFT TYASIRERVN GVLALEIMGF
301 AILLALSFYA LSRRTAFRAA LFQRESAELR ALNARLQREI AERERVQKTL EVAEQTLAQS
361 SKLAALGEMS AAVSHELNQP LAAMKTYLAG ARLLLRRNRP EEALSSFGRI DDLIERMGAI
421 TRQLKSYARK GQEALSPINM GDALGASLAM MEPQLRQRQV QITQILPDRP VLVMGDRMRI
481 EQVMVNLLRN ALDATKSVRD PEVEIILAAG ETATLTVRDN GHGIRNFENI FEPFYTTKQP
541 GDGVGLGLAI SSGIVNDLGG RLTARNGQHG GAVFEMQLPI LEDGLEAAE
SEQDB ID: 3101377CUH
Reference:
3101377
Name: C4-dicarboxylate transport transcriptional regulatory protein, Isotype: DctD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dctD-1
Sequence:
1 MAQAMKIAIV DDEQDMRQSI SQWLALSGYD TETFASAEEA LKVLGSEYPG IVISDIKMPG
61 MDGMQFLKKL MGADSSLPVI MITGHGDVPM AVEAMRVGAF DFLEKPFNPD RMSDLAKRAS
121 NARRLTLDNR ALRRELSDGG QIMKKLIGTS PVMERLREDI LDLGQADGHV LIDGETGTGK
181 TLVAHALHAV GSRAGKKFVL VSCSALEEEA LAKRLFGPMI PEDAQLPAIE EARGGTLVLE
241 DVESLSDALQ AKLLSVMNQQ GTPAETRIVA ISNLQEAGKT SEDVLRPDLF YRLAALRLTM
301 PPLRQRGEDI LTLFTRLSEQ FAEEYGCDAP QVSAQEAAQL LQAPWPGNVR QLINIAERAV
361 LQARRGSGTI ASLLMSDHED MQPVMTTEGK PLKEYVEAFE RMLIDNTMRR HKGSIAAVMD
421 ELCLPRRTLN EKMAKYGLQR SDYL
SEQDB ID: 3101377CUJ
Reference:
3101377
Name: RNase, Isotype: rne/rng family, Class: EC3.4.24.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKKMLIDAT HAEETRVVVV DGNKVEEFDF ESENKRQLAG NIYLAKVTRV EPSLQAAFVD
61 YGGNRHGFLA FSEIHPDYYQ IPVADRQALM EEERAYAEAQ KARDEDEEGG KSRSKPKRSR
121 SRSRSKAESL RSSDPVETMD VSETEISGME TIDLDEGDDR DDIDLIEGSS PMERVAETPV
181 EEPEDGADET VDQTADQAAD EAADAAEDTD TTETDGETAQ DNTEDRADEA DDEDEDDGED
241 APRPRRGKAD AASKDDSIES IAEEDDAEDL RPARKPRARK YKIQEVVKVR QVMLVQVVKE
301 ERGNKGAALT TYLSLAGRYC VLMPNTARGG GISRKITNAV DRKKLKEIAA EMDVPQGAGL
361 IVRTAGAKRT KAEIKRDYEY LQRMWEQIRE LTLKSIAPAK IYEEGDLIKR SIRDLYNRDI
421 DEVLVEGEGG YRIAKDFMKM IMPSHAKNVQ RYEDQLPLFA RFQVESYLNS MFNPTVQLKS
481 GGYIVIGVTE ALVAIDVNSG RATKEGSIEE TALKTNLEAA EEVARQLRLR DLAGLIVIDF
541 IDMDERKNNA AVEKRMKDKL KTDRARIQVG RISGFGLMEM SRQRLRPGMI EATTQPCPSC
601 HGTGLIRSDD NMALSILRQI EEEGTRRRSR EVLVRCPVGI ANYLMNQKRE HIAQIEARYG
661 LSVRIEGDAH LVSPDFSLEK FKTATRSVPQ VQAPVVSVDS RLMDQIDADE AFEEEDEAEE
721 VRTEPRGETA GEGDGDGKPK RKRRRRRRRK NGGNGGEDST ADGDSGEIGD EAAEDAADAA
781 PEAAEDAAVT EAEAEPAAAE GGEAEVEAVA EAEAEAEAPA KTPRKRTRTR KKPVKAEAAA
841 EAPADAMASA DVPAVEGDAG ETPAEADAEA EAAPVKKTPK PRKPRSRSKK AEAPAEAAEA
901 SVAAEAPAAE SVEAEPATAV EATAPEAVAE TVVDEAAQPA EDAIAAPAEP EAAPEPEVAQ
961 AEPAAPEMAV AEAEAEPDGP PKPKRRGWWS LGQ
SEQDB ID: 3101377CUK
Reference:
3101377
Name: SirA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDDFETLDA LGLLCPLPVL KARKRLKSMA PGAVLRLLAD DPAAVVDVPH FCAEAGHALI
61 GQDEAPDHQI YLIRKAD
SEQDB ID: 3101377CUL
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CcdA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccdA
Sequence:
1 MFELEIIDAG LLPAMFVALL GGIVSFLSPC VLPIVPPYLA YMSGVTLGEI QDQAAARRKA
61 TLAALFFVLG LSTVFLLLGF TASAFGAFVL SNQELFAKVS GVVVIVFGLH FLSVFRIPLL
121 DREARMQTGD AGGSVFGAYV LGLAFAFGWT PCIGPQLGAI LSLAASEASV ARGTLLLGVY
181 AAGLGVPFLL AAMFLSRSMA LMNRIKPHMG LIEKVMGGLL LFVGIMLVTG LFTQFSWWLL
241 EAFPALAELG
SEQDB ID: 3101377CUM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSVPSAGQV RRRRVFYIPG YDPIHPRRYR ELYRKESAEQ ARISGYSVTL KPKTTKGPYG
61 WHVRSEQDGA EVAADVEVLV WSDIVRGSMS NTIPATYAQL ARTAWTYIAS GVLWRLMRLR
121 KGPVIAALYP VGMLLAQLFA ALFLVWLGWR LGGLTGWPLA ALAGMGVGAG AGVYLLRWFR
181 SKDGTFFAYY LMHDYAYSAR WRGANPPELE ARIGDFAERI AGALASDADE VLVVGHSSGA
241 HVGVSVLADL IRAGRVPADG PALGFLTLGQ VVPMVSFLPE AQRLRADLHY LCTRDELAWV
301 DVSAPGDGCA FALCDPVSVS GVAPATGKRW PLVLSAAFTK TLSPARWAEL RWRFFRLHFQ
361 YLCAFDQVGD YDYFRITAGP QTLAARYRDR APSKSRIERA VSKYTDMGAS
SEQDB ID: 3101377CUN
Reference:
3101377
Name: cytochrome P450 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPPKPPARP DKVSLWRYLR LFRQDLLSAQ PARLYRAWMA EFRTPFFRSY LVNQPDLVDT
61 VLKGRPDDFP KSNRISEGLR PLLGNSVFLT NGETWKRQRR IIDPAFEGGR LRDTFPAMWA
121 ASEAAVNRLA AQAGQETEIE EVTSHAAADV IFRTLFSIPI EHEVAAQVFT RFRAYQRAQP
181 LLNLAAFVPV PQWVPRFHSR ETRRNAAVIR GLIRQLTDTR MGEIRAGTAP DDLATKIMTT
241 TDPQTGDRFD TDEMVDQVAI FFLAGHETSA SALAWTLYLM ALYPDWQEKL AEEARTLDSG
301 TDFSVMSKLR LSRDVFREAL RLYPPVPMMV RETTCPERFR DRDVPKGAQI VLSPWHLHRH
361 ERLWERPDDF DPARWQTENG KTCQRNAYMP FSAGSRVCTG AGFAMVEGPL ILSMLLLRFR
421 FERIAGREPV PVAHLTVRAA DGIWLRVVER
SEQDB ID: 3101377CUP
Reference:
3101377
Name: fructose bisphosphate aldolase, Isotype: class I, Class: EC4.1.2.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fda
Sequence:
1 MSKAQMREQM ANGAGFIAAL DQSGGSTPKA LALYGVDAAQ YGSEEEMFAE IQRMRARIIL
61 ADDFTSKKVI GAILFERTLG ESIEGRGVAD YLWNVKGVVP FLKIDKGLED EANGVQMMKP
121 IPGLAATLAK AEGVFGTKER SVIHEANAEG IAAVVAQQFD VAREVIAAGM VPIVEPEVNI
181 HSTTKAQAEE MLKDEILKNL DTLGEGQDVM LKLTIPSTAN LYDVLADHPR VVRVVALSGG
241 YSTDQACDLL SRNGKMIASF SRALTEGLSK QQSDAEFNTA LGGNIDKIYR ASL
SEQDB ID: 3101377CUQ
Reference:
3101377
Name: DNA-3-methyladenine glycosylase, Isotype: I, Class: EC3.2.2.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tag
Sequence:
1 MSSTIPGPDG QPRCRWCNSA PEFFDYHDRE WGYPVGDDRR LFEKLCLESF QSGLSWRTIL
61 AKRENFRAAF DGFDWTRIAA YDAADVARLL DDAGIIRHRG KIEAVINNAR RMGDLLAEHG
121 SLAAYVWSYE PKPEDLPEPQ TASIIPASTA MSKDLKKRGW KFVGPTTVFA FMQAMGLVND
181 HARGCVMRDK AADLRAGFTP PK
SEQDB ID: 3101377CUR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFLILLKFST NKARAPEVMA DHVAWLKQGF DDGVFDLAGS LQPQLGGGIL ARAATRAEVE
61 ARVAADPFVI EDVVTAEILE LTPSRASADF TFLLPEVAA
SEQDB ID: 3101377CUT
Reference:
3101377
Name: transcription regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVQAQTRDQI VAAADELFYR QGFAQTSFVD ISAAVGISRG NFYYHFKTKD EILAEVIRLR
61 LARTAQMLAD WQGTGDSPRA RIASFIDLMI MNRAKITRYG CPVGSLCTEL SKLDHAAQGQ
121 ANGLFTLFRD WLQRQFAEAG CTTEAPALAM HLLARSQGAA TLAQSFHDEG FLRSEVADMH
181 RWLDNTLPMT T
SEQDB ID: 3101377CUU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGRPVKRSL TLRGHRTSVS LEDAFWRAFR EIAKEKDMPI NVLAGDIDAA RDPETGLASA
61 IRVYVLGWYQ SRR
SEQDB ID: 3101377CUV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKPVNLNQF RKQKERAEKK ARADENAVKF GRSKADKQLE RARADKARRD HDGHEVEE
SEQDB ID: 3101377CUW
Reference:
3101377
Name: fumarate hydratase, Isotype: class II, Class: EC4.2.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fumC
Sequence:
1 MPADRYWGAQ TQRSIQNFPI GWERQPVAII RALGVVKKAC ALRNRETGAL AQDLADAIVA
61 AADEVIAGRL DDHFPLVVWQ TGSGTQSNMN ANEVIANRAI ELLGGQLGSK DPVHPNDHVN
121 MGQSSNDTFP TAMHVAAAMM ARDVLLPGLY ALLAGLEQKA EEFRDIIKIG RTHTQDATPL
181 TLGQEFSGYA HQIRMGLTRI EAALPGIHEL AQGGTAVGTG LNTRAGWAEA VAANMAEITG
241 LPLVSAPNKF EALAAHDAMV FLSGAIATVA GSCYKIANDI RFLGSGPRSG LGELILPENE
301 PGSSIMPGKV NPTQAEALTQ VAAHVMGNDA AIKFAGSQGH FELNVYNPMM AYNLLQSMQL
361 LGDAADSFTQ RMLLGIRANT ARIDQLMRES LMLVTALAPT IGYDNATTVA KTAHKNGTTL
421 REEAVRLGFV DAETFDRVVR PEQMIGPRD
SEQDB ID: 3101377CUX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAIPLSALT RPVLALLVSL LLVPAAFAGE AARFVGTYMG SAEVQRADGS TEMRDMDVTI
61 EETKDGFTVS WSTTIQKPDG RIKESDYSVD FLPSTRDGVF AAAMRRNVFG HTVQLDPMKG
121 EPYVWGRISG DTLTVFSLFV ADDGGYEMQQ FDRTLAEGGL VLNFSRVKNG LPAKSVETFL
181 QKQ
SEQDB ID: 3101377CUY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRDIDYGNL MHTAMRGLIK TVLADVAQHG LPGAHHFFIT FDTRYEGVQL ADWLADRYPG
61 EMTIVMQHWY ENLDVGEDGF AITLNFGDSP EPLYIPYDAI RTFVDPSVEF GLRFESPDFD
121 EDDEDDIEVE EEPDAPKPDA EVVSLDSFRK P
SEQDB ID: 3101377CV
Reference:
3101377
Name: betaine aldehyde dehydrogenase, Class: EC1.2.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: betB
Sequence:
1 MKFQPEASHF INGAYVEDTA GAVIDVIYPA TGEVIARLHS ATPAIIDQAL EAARQAQAQW
61 AAMTGTERGR ILRRAADIMR ARNHDLSVIE THDTGKPIQE TTVADATSGA DALEYFGGLA
121 GSLTGEHIPL GGGDFAYTVR EALGVCVGIG AWNYPTQIAC WKGAPALACG NTMVFKPSET
181 TPLSALKVAE ILIEAGAPKG IYNVVQGYGD VGASLVTDPR VAKVSLTGSV PTGRRVYAAA
241 AESIKHVTME LGGKSPLVVF DDADIENAVS GAILGNFYSS GQVCSNGTRV FVQKGIKEAF
301 LSRLAERLAT AVIGDPMDPA TNFGPMVSEA QMNIVLGYVD KGKAEGARLV YGGTRLDRDG
361 FYLLPTVFAD VTDDMTIARE EIFGPVMSVL DFDTEEEVLE RANATEFGLA AGVFTRDITR
421 AHRMVAGFEA GTCYINSYNL APVEAPFGGS KQSGVGRENS KLAINHFSEM KTVFVSMNDI
481 QAPY
SEQDB ID: 3101377CVA
Reference:
3101377
Name: chromate transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGCSIAGAGI GRFRTLRALR RQKGAGMTVK NSASGPLSDS ATTAPPALAE MARVFGRIGL
61 LSFGGPAAQI ALMHRELVET RPWLDEQTYL RALSLCMLLP GPEAMQLATY AGWRLRGVTG
121 GLLAGALFVL PGALVIAALV AVYVQVGSVP LVQAGFLGIK AAVIVIVIEA LRKLAARTLK
181 TPAAWILAGL AFVAIFALSL PFPLIVLAAA LWGFARTAPG ARAQTALPRP PYRSAALWLT
241 LWLGPLLLLE RFGAPLLADI GWFMAKLAVV TFGGAYAVLA YMTQTVVDQY HWITTAQMID
301 ALGLAETTPG PLILVTQFVA MLSAYLDGGA SLAALAGLVA LWATFVPCFL WIFTAAPYLD
361 HIAGRPRPAA ALAAITAAVV GVILNLSLWF ALHVLFSDVS VLRAGPVSLP APQLSSFDPL
421 ALALAALAAV WLILLRRGMG ETVLLLALAG AGSHFL
SEQDB ID: 3101377CVB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAATMEALMN KSELLKEWYA RVWEQGDVEA IDQFFAQDTM AEGLIPEMQV GADDFRDFVS
61 AFRYHLGDIR VDIPKTIENG DWLSAILHVH TSRADNGAPI EVTGQVMARY KDGKIVEAYN
121 QFDLISLFEQ LGQMPADTLP ICMTGQRLEW R
SEQDB ID: 3101377CVC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGQIWTMFA ATSPFSPEIW LRDVFDSKAV THGQVIRRKT RDIERYVGMQ RFLDEVRQRG
61 FQAVQNREQV IVFCNSAPIR RLV
SEQDB ID: 3101377CVD
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQIDPNSATD LPVQIAQAIK DAIVSGALIV DERLPSEAEL ADQFKVSRPT VREALKRLAA
61 QSLIRTQRGA FGGAFVNRLS FEDAQAQQIT TSTLLLSMNA VSFDTACEAR FALERACAPL
121 AAERRGDAHL AAMQAEIGRQ GAPDLSDEAF CASDVAFHRA LVDAACNPVL SYHLAGAVEA
181 MQPLMNMITF TARSRGTIVA LHARIAEAIE ARDPALADTA LVELMRYTMT LKDDVMAARA
241 ARS
SEQDB ID: 3101377CVE
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASIFPSRRV RRTPFSAGVE AAGVKGYTVY NHMLLPTVFD SLQADCAHLK EHVQVWDVAC
61 ERQVSIQGPD ALRLMKLISP RDMDRMADDQ CYYVPTVDHR GGMLNDPVAV KLAADHYWLS
121 LADGDLLQFG LGIAIARGFD VEIVEPDVSP LAVQGPRADD LMARVFGEAV RDIRFFRYKR
181 LAFQGVELVV ARSGWSKQGG FEIYVEGSEL GMPLWNALFA AGADLNVRAG CPNNIERVES
241 GLLSYGNDMT RENTPYECGL GKFCNSPEDY IGKAALAEQA KNGPARQIRA LVIGGEIPPC
301 QDAWPLLADG RQVGQVGSAI HSPEFGVNVA IGMVDRSHWA PGTGMEVETP DGMRPVTVRE
361 GFWR
SEQDB ID: 3101377CVF
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFNALVVDKD EESGKTQAAV KQLSLTDLPV GEVTVAVEYS TVNYKDGLCI GPGGGLVRKY
61 PHVPGIDFAG TVENSSDERY KPGDKVVLTG WRVGEAHWGG YSQKANVRAD WLVPLPEGLD
121 TRQAMAVGTA GFTAMLAVMA LEDHGLTPGH GPVLVTGAAG GVGSVATAIL AHLGYEVAAV
181 TGRPETADYL TSLGATQIVA RDEINETVKR PLESEIWAGC VDAVGGAMLA RVLGQMKYGA
241 SVAAVGLAGG AGLPATVIPF LLRGVNLLGI DSVMQPYANR LRAWERIARD LPMDKLEAMI
301 RPATLSDLPG LGADILKGQV QGRVVVDVNA
SEQDB ID: 3101377CVG
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYQPEHFLV WGELPVSDMT RSVDFYAKVT GADLTIDSSG PNPMAILKPA DARTGVALHL
61 YPGTPAGDGR GPTLHLAAEG ALEQIMTRVG EAGGEVISPA ITIPAGRFFY AKDPDGNSVG
121 FFETSPA
SEQDB ID: 3101377CVH
Reference:
3101377
Name: aminotransferase, Isotype: class V
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALDIDFVRK QFPAFAEPSL HGQAFFENAG GSYTCQPVID RLTRFYTQRK VQPYAPYEAS
61 RLGGAEMDEA RARMAAILGV ETDELSFGPS TTQNTYVLAQ AFRQWMQPGE AIIVTNQDHE
121 ANSGPWRRLA EAGIEVREWQ IDPETGHLNP EDLEDLLDET VRLVCFPHCS NVVGEINPVT
181 EITAIAHAAG AFVCVDGVSY VPHGFPNVGE LGPDIYLFSA YKTYGPHQGL MVIRRTLGEL
241 LPNQGHYFNA DSLYKRFTPA GPDHAQVAAC AGMADYVDQL AAHHGITATD AAGRGAAVHD
301 LMRAHEVTLL QPLLDAVRDR NSVRLIGPDR AEQRAPTVAL AMNRPGEPVA AELAQHGIMA
361 GGGDFYAVRA LAAMGVDPVQ GVLRLSFTHY TSKDEIAQLI EALDRVL
SEQDB ID: 3101377CVJ
Reference:
3101377
Name: deoxyribodipyrimidine photolyase, Class: EC4.1.99.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phrB
Sequence:
1 MSETRAIIYW LRRDLRLADH PGLAAAAASG RPVVPVFIHD ESVAALGAAP AFRLGLGLER
61 FGATLGDMGS RLILRRGSAP AVLQALIAET GAGAVWWTRE YTPQAITRDS ALKTALQQAG
121 IEARSFGGAL LFEPWTVETG AGGFYKVYTP FWRAVSQREV SAPDPAPARV RPPEAWPGSE
181 ALSDWGLGAP MRRGAAVVAT HQAPGEAAAL ERLDRFIATG IGQYDACRDL PAGDGTSTLS
241 DALSLGEIGP RTLWHRAGEA AHKGAQGAET FLKQLVWRDF AYHLMYHTPH LLSENWRPGW
301 EVFPWATDPA DPGFVAWTRG RTGVPLVDAA MREMYVTGRM HNRARMIAAS YLTKHLMVHW
361 KLGMDWFADC LTDWDPAANA MGWQWVAGCG PDAAPYFRIF NPETQAKKFD PKGRYRNHWI
421 AEGQAEPPRA ALSYFDAVPR SWNLRPDASY PPPIMALDQG RRRALSAYAS AFSQGSDGKL
481 A
SEQDB ID: 3101377CVK
Reference:
3101377
Name: cyclopropane fatty acyl-phospholipid synthase, Class: EC2.1.1.79
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cfa
Sequence:
1 MILTSTEGQE GLPRYFPQVM KMLARMQAGR LDIALPDGRV FRSEGPEPGP VARVDIHDTD
61 VFARLIREGE LGFSDAYLEQ DWSTPDLRAF MDLVHQGEET VYDGFTGQFL ARAYERLRFW
121 LQRNHRKQAK KNISYHYDLG NDFYALWLDE TMTYSSALFE TGQESLEKAQ EAKYASLLDE
181 MGAQPGDHIL EIGCGWGGFA EYAARQRGMR VTGLTISQEQ FKFARERIEK AGLSDQVHFK
241 LQDYRDETGS YDGIASIEMF EAVGEKYWPV YFDTVRARLK PGKRATLQII TVADRRWEIY
301 RNGVDFIQKY IFPGGMLPAP GILREQVARA GLEFVQSREF GKSYDLTLRR WYETFNDKWD
361 QVAELGFDDR FRRMWNFYLT SCGAAFDTGT CDVTQMTVAR PNHS
SEQDB ID: 3101377CVL
Reference:
3101377
Name: tellurite resistance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trgA
Sequence:
1 MPTAARLVAA FCLALLAFIV SEQVKPQLPE GTDFGYFNWV NTGLGILCGW VIMGPRAGRG
61 AVSGINNGLT GVGALVFWGL FVHGTYEMFR LAMRNRYDGP FDALLAIFEE AVEFGSALLV
121 SHILVTLVIG AVISGLATDF AWRRWR
SEQDB ID: 3101377CVM
Reference:
3101377
Name: tellurite resistance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trgB
Sequence:
1 MRFHQRIEIF VTDLFFYGTL RHAPLLEVVL GTTDPRPEIT AASLPDHAVF SIQGQPFPMI
61 QTAPGARAEG LLVRGLTPLQ LDRLNFYEGG FAYDLQAVEV TLPTGGSAKA QVFFPQEGLW
121 SPEAPWHLAD WVAEWAPLSL HAAAEVMDFH GRLTPEQVGR SFPAIRLRAA ARLAAAARPA
181 DPARDLSRDV VVERYSRAYV NYFGLDEIDI RFRRNDGTMS DCLNRGALVT GQVTIVLPYD
241 PVRDQVLLVE QFRVPVYMIG DPAPWMLEAV AGMIDPGETP EQAAERELLE EAHLTAYRLE
301 PAGKAYSSCG SSTQFSHLFL ALADIRTETD SGGLASEGED IRTVILSFDA LMELIDTQQI
361 KDLGLVAVAN WLARHRDRLR G
SEQDB ID: 3101377CVN
Reference:
3101377
Name: pyridoxal phosphate-dependent enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIARDLAEA VGHTPLIRLR RVSEETGCEI YGKAEFMNPG QSVKDRAALY IIRDAIARGE
61 LQPGGTIVEG TAGNTGIGLA LVGASMGFKT VIVIPETQSE EKKDMLRLAG AELVQVPAAP
121 YRNPNNFVRY SERLARELAK TEPNGAIWAN QFDNTANRQA HVETTGPEIW EQTGGKVDGF
181 VAAVGSGGTL AGVAEALQPK GVKIGLADPM GAALFSYYTT GELAMEGGSI AEGIGQVRIT
241 RNLEGFKPDF AYQVPDAEAL PYIFDLLRQE GLVMGGSTAI NIAGAVRMAR EMGPGHTIVT
301 VLCDYGTRYQ SKLFNPDFLR EKDLPVPEWM SRAPSSIPGV FEDV
SEQDB ID: 3101377CVP
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCSRTSDMAL GRMLRVVLSA VLLLAATALS AQLSDESRAY YERWVRTAER AEDVIKANRA
61 SQAAFEQLRF EIRGYRDTFN RVRGENSDRI KTLEAQISAL GPKPGDGEAE AEDISRLRTH
121 LNDQLARLTV PRIISEEAYS RANGLINEID RIVRARDTKE LLRRGPSPLN PEYWTDAWKD
181 IEQAMRALAN EVAFNIRSDV VRERLRINGP GILLLSVVGL VFLARGRKWS ERAGDFLRSL
241 GGVGTGVWSF VVSLLRILIP WIGVMFLVSA LEMMDITGLR GAILLEQVPY WAAAILYFNW
301 IGRQVYLFNA STGFRHLSEA QVRVARICVD LLAVMLVLHD MVVLFERIEN IPEATRAVAG
361 FPVIVMTALL LLRLQRVRVQ GQARNAALDG SETTRSGAGF SRMVGFLRRA LYLLGIASPL
421 LAAVGYNNAA EALVYPAVKT LALIAVMVIL QRFLTNVYGW LTRKGDDARD SLFSVILGFA
481 LALVALPLLA LYWGAREAEL TEIWARIMMG FDIGGVTISP SNFMTFALVF AVGYTITRLL
541 QGGLRNSLLP KTRIDPGGQN AIVAGTGYLG IFLAALLAIT MAGFDLSSLA IVAGALSVGI
601 GFGLQTIVSN FVSGIILLIE RPISKGDWID VNGQMGYVRD ISVRSTRIET FDRTDVIIPN
661 SDLISGSVTN YTRGNTVGRV IVPVGVAYGT DTRKVEAILR EIAEAHPMVL ANPAPNVVFQ
721 RFGADSLDFE IRAILRDVNW VLSVKSDMNH EINRRFAEEG IEIPFAQRDV WLRNPEALSG
781 KTPPPAAPAA ASKAATLTEG DMDGGAADDY
SEQDB ID: 3101377CVQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTEPLFLQD AYLRQAPARV IGHTDEGGVI LDRSLFYATG GGQPGDSGLL RWDGGEMTVA
61 TTIKAGEGAI AVLPAEGATP PPIGTEVIQE LDWERRHAHM RVHTALHLLS VVIPLEVSGG
121 AIAADKGRLD FNMPEAPEDK AALEQALQAL IERDLAVSED WITDAELDAN PALVKTMSVS
181 PPRGSGRVRL VRIGQGADQV DLQPCGGTHV ARTGEIGPVR LGKIEKKGRQ NRRVYLHLDG
SEQDB ID: 3101377CVR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAYTRPKRI SLKNHPVYSE NWVQDIIADD PSILGLGDLV LRDRERIQSR AGRLDLLLQD
61 PETYKRYEVE LQLGATDETH IIRSIEYWDI ERKRYPQYEH CAVLVAENIT SRFLNVVSLF
121 NGAIPIIAIQ MQVFEVGDHV TLVFTKVLDE LQRGLVDEDE DAISAPTDRA YWEKDKGTPK
181 TVALMDRMFE LVKEGDPESE LKYNKFYVGL IKEGRANNYV AFRPKKAFVL FEPKLPRSDE
241 VDALLEDVGI ETLEYATRWG NYRIRVTDAD FKVHKGLFQD LIEKARSYRE G
SEQDB ID: 3101377CVT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPQDFITKW RNTELKERSA SQSHFIDLCR LLDIEDPTTA DPKGEWFTFE KGASKTSGGE
61 GWADVWRKDC FAWEYKGKRA NLDKAFDQLL QYAIALENPP LLIVSDMDVI RIHTNWTNTV
121 QQVHTLTLDD LKDAANRDKL RNAFLNPDVF KPSKTRQLVT EQAAQNFANL AQRLRERGHD
181 AQQVAHFVNR LVFCMFAEDV ELLPNKMFER MIKAARPDPA SFAIHAKALF AAMKDGGLVG
241 FEKVDWFNGG LFDNDDVLPL EWEDLDDLIR AAHLDWSDID PSILGTLFER GLDPAKRSQL
301 GAHYTDRDKI MQIVNPVIVE PLLAEWAEVK AQIEDLIDKA PKATKDKLLS TSQKAARTRA
361 LDKAEALHQA FLDRLKAFRV LDPACGSGNF LYIALLELKN IEHRVNLEAE ALGLPRGFPQ
421 IGPEVVLGIE LSAYAAELAR VSVWIGEIQW MRRNGFEAAK NPILRSLKTI ENRDAVLNPD
481 GTRADWPKAD VVVGNPPFLG VYKMGEELGE DYTIALRDAW PEMPGAADLV TYWFAKAWSQ
541 MQCGDLSRAG LVATNSIRGG ANRTVLKPIA EHGGIFDAWS DEAWTVEGAA VRVSMICFGS
601 KLPSHPKLNG KVVDKILSDL TANAAGFDLT KSSRISENKG VCIRGIETGG PFEFSQADFE
661 ALATKPLNPN GLPNTRVIRR ILNGNNILKR QPERYAIDFS DFRTKEEAAL FEAVYSWLEQ
721 AYESYERKSK RRIVRRQDWW LHRRSGAALK NAVSRLSRFI VTPRVGKHRI FVWLDSNALA
781 DSATFIVARD DETTFGILHS SFHELWSLRM GTFLGVGNDP RYTPSTTFET FPFPEGLTPN
841 IPADEYADAP RAIKIAAAAK RLNEFRENWL NPADLVDRVP EVVSGYPDRI LPKNDAAAKE
901 LKKRTLTNLY NARPAWLDHA HKALDEAVAE AYGWGDDWRA GVLTEDEILA RLFKLNQERA
961 AKEKA
SEQDB ID: 3101377CVU
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAENHLRRHA VEAVTGLSRS SIYAMMDAGD FPRPVRIGKR AVAWPQSAIE AWLANRPTSK
61 GAE
SEQDB ID: 3101377CVV
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADGNQKIQR KAQSKRAEKA LSAAFVRTVT KPGKYTDGHG LFLKVDDTGA KRWVQRIVIR
61 GKRTEIGMGS ASLVSLAEAS ETALQNRKLA RAGGDPLQAK RTAQALLTFE EAARKVHKIH
121 EPTWRNKKHA AQFISTLETY TFPRIGKLKV SEVATADVLA VLQPIWLEKP ETARRVRQRI
181 GTVMKWAIAN GWRTDNPAEA ISQALPKQID TQQHRKALPY DKVPEFLETL KASDAGDFTK
241 LALELVVLTA SRSSEVRKAE WSEFDLEQGI WTRPAERMKS KKEHRVPLSP RALEILIEAR
301 ELCTGEGLVF PGTKIGKPLS DMTLLKLTKA LGYDVDVHGF RTSFKTWAQE RTNTPRDVSE
361 AALAHVLKDK AEAAYARSDF FEKRRKLMER WASYISSNLG SMARIA
SEQDB ID: 3101377CVW
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAGRRTGRN SHMTQSNSTG LTRRALLRAF TATAVAAAPT YSMAAGFLRG GGDIRRIRMY
61 SGRTGERIDM VYWIDGDYIK DAVKEINYFM RDWRVDQVKS MDLRTVDIMA AAHNLMDVNE
121 PYMLLSGYRS PQTNAMLRSR SRGVARNSLH MQGQAADLRL ASRSVSQMAN AAIACRAGGV
181 GKYYRSNFVH MDCGEVRSWG G
SEQDB ID: 3101377CVX
Reference:
3101377
Name: peptidoglycan-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPHLKRPAIR LTLTALLLAG VAVLASPGTA DAQVTAYKQA VAEASYGEDG VAAFYRKNGY
61 QPVWTGEGAE FTARRIALIE ALSMADVHGL PAGRYDINGL KAQMAAARTT RDMGLVEVAL
121 SREFARFARD LQTGLLTPSQ IDDGMVRVVE RRGAEAYLSE LQAAEPGRYM RMLAPNTSQY
181 RALLKLKLDL EQALATGGWG PTVAGGKLAP GDGGPRVVAL RNRLIAMGFM DRSAVASYDG
241 TLQKAVQAFQ LAHGLEADGV AGDGTLDEIN KSVADRLKSV IVALERERWL PRDRGERHIL
301 VNQTDFTAKI VDHGRVTFET RSVIGKNVSD RRSPEFSDEM EHMVINPSWY VPRSIITKEY
361 LPKLRANPNA VRHLEITDSR GRQVNRGAVD FSQFSSRSFP FAMRQPPGKS NALGLVKFMF
421 PNKYNIYLHD TPQKDLFARE VRAYSHGCIR LAQPFEFAYA LLALQEADPK SFFHNVLNTG
481 RETKVDLERH VPVHIIYRTA VVDDRGQAGY RRDVYGRDAK IWEALSRAGV VLTAVQG
SEQDB ID: 3101377CVY
Reference:
3101377
Name: UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase, Class: EC2.3.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpxD
Sequence:
1 MSYSISQIAK ALGAEAAGNL DLTVTGAAEP GDAGHDQLAL AMSPKYAEAL AKGGARAAIL
61 WPGAAWQAMG LEAAIFAARP RLAMAGLTAM LDPGQGVASG IHPSAVIDPS AEIGADVSIG
121 PLTVVGARAR IGAGSVIGPH CVIGMDAVLG EGAWLREMVS IGARATIGAR FIAQPGARIG
181 GDGFSFVTPE VSGAENARKT MGDQGEAKAQ AWTRIHSLGA VEIGDDVEVG ANCTVDNGTI
241 RNTCIGDGSK LDNLVHVGHN TRIGRDCLLC GQTGVSGSVE IGNNVVLGGQ TGVVDNIYIG
301 DGVIAGGGSK ILSNVPAGRV IMGYPAVKMD LHTEIYKAQR RLPRLLRDIS ALKKAVSKPG
361 PSE
SEQDB ID: 3101377CW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDAMTQHYDA MPQMGPSNDY HLLPVTEKQL RFARSIAARA SLDIPIEAQR DRRMLSAWIS
61 AHRAPESSPF DRYPSGKQVA YAERIARAKR RAVPSECFHD KAAMSAWIDR NK
SEQDB ID: 3101377CWA
Reference:
3101377
Name: acyl carrier protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSISDRVIAI IAEQAVLEPS DVSPESTLED LGIDSLGLVE SIFAIEEEFD ISIPFNANEP
61 SQSDFDISNV AAIIAGIEKL VSEKV
SEQDB ID: 3101377CWB
Reference:
3101377
Name: beta-ketoacyl synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRVVITGAG TINALGHSVP ETLTAMREGK CGIGELEFRD VDRLAIRIGG QVRGFEAEGR
61 FNRQQMSLYD RFTQFTLTAA KEAIDQAGLA FHGELAAKSG VVLGTAGGGV STWDENYRSV
121 YEEGKNRVHP FVVPKLMNNA AASHVSMEHN LKGPSFTVST ACASSNHAMA QAFSMVRSGM
181 APVMITGGSE SMLCFGGVKA WEGLRVMSKD ACRPFSANRN GMVQGEGAGI FVFEEYEHAK
241 ARGAEILCEV AGFAMSSDAA DIVMPSKQGA ARAMAGALAD ARINPGEVGY INAHGTGTAA
301 NDKTECAAVA DVFGRHADSL MISSTKSMHG HLIGGTGAVE LLACIMALRD WVIAPTIGYE
361 EPDPECALDV VPNEAREAKV DVALSNAFAF GGLNAVLALR KV
SEQDB ID: 3101377CWC
Reference:
3101377
Name: invasion-associated family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDEGRAAHL FDEAFMTKTL ISLSAAALLA LTGAAMAQDT TTQTETAPAP AQEEPKTADQ
61 LLDLGTPADG APQLGQRYSK EKIGDWDMAC IKTEAETDPC SMLQILTDAK GNPMAEFSMF
121 RLEDGGVAVA GATVIVPLET LLPAQLTISI DGAPGKRYNY SFCNPIGCVA QIGLTQTDID
181 AMKKGAKATV SLVPAPAPDQ TVSLDLSLKG FTASYDKVDV VSNN
SEQDB ID: 3101377CWD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGKIFLGGG GPDYGVAQGL DLKYANRHGL IAGATGTGKT VTLQILAQGF AEAGVPVFLA
61 DVKGDLSGMA KPGSPDHKLH AAFTSRAEKI GLSDYAYRAC PVTFWDLFGE QGHPVRTTVA
121 EMGPLLLSQL LELTEAQEGI LNIAFRLSDE EGLPLLDLKD LQALLVWIGE NGKSLSLRYG
181 NISTASVGAI QRRLLVIENQ GGARLFGEPA LDLADMMRVD DQGRGMVNIL AADTLMASPR
241 LYSTFLLWLL SELFEELPEV GDPEKPKLVF FFDEAHLLFD DAPKALVDKV EQVARLIRSK
301 GVGVYFITQN PADVPEDVLG QLGNRIQHAL RAFTARDRKN LRLAAETYRE NPAFDTEEAI
361 REVGVGEAVT SMLMKKGVPG VVERTLIRPP SSQLGPITPA ERKAILNTSD MAGKYDTPLD
421 RKSAFEILAK RAEEAAKEAE QAEERAEEAS PWEREYNSAR RYSGSRVGRS SARQTSSRRR
481 SEDTLTSAMG EAVIKELKGT TGRRIVRGIL GSLFKGR
SEQDB ID: 3101377CWE
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETVKNTAL FLGIAVLVAI TGFMQSWNSA ILIVNMGLIS AIMAIGVNLQ WGFAGLFNVG
61 IMGFVALGGL AVVLVSEPLS PEAWSAGGFG IVLALLLGAA TVVAAVLVAR HMPKGRSRNL
121 AMLAVLVLGF IIYRAVFDPN VMAVEAINPA AAGNIGGLGL PVLLAWPAGG LLAAGAAWLI
181 GKTALGLRSD YLAIATLGIA EIIIAVMKNE DWLARGVKNV IGLPRPVPYE IDLQNDAGFV
241 ESAASLGIDP VTASTLYVKL GYSVLFMVVL LILLWMAQMA LKSPWGRMMR AIRDNEVAAE
301 AMGKDVTRRH LQIFVLGSAV CGIAGAMMTT LDGQLTPGTY QPLRFTFLVW VMVIVGGSGN
361 NFGAVLGAML IWFLWVQVEP LGLFLMQVIT SGMAEGSALK SHLIDSAAHM RLLTMGIILL
421 LVLRFSPRGL IPEK
SEQDB ID: 3101377CWF
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEILNALVAL SNFVLIPAIA YGSQLALGAL GVTLIYGILR FSNFAHGDTM AFGAMITVLV
61 TWWMQSHGIS LGPLPTALLA LPFGILGCMA LVLVTDRAVY RFYREQKAKP VILVIVSMGV
121 MFIMNGLVRF VIGPNDQNFA DGTRFLISAR DFKKMTGLDE GLAIKTTQAL TVVVAVICVA
181 LLFWFLNRTR TGKSMRAYSD NEDLALLSGI NPERVVMYTW LIVAALATTA GVLYGLDKSF
241 KPFVYFQLLL PIFASAIVGG LGSPLGAIAG GFVIAFSEVT VTYAWKKVLG YLAPEGMSPD
301 GLVQLLSTDY KFAVSFVILL IVLLFKPTGL FKGKAV
SEQDB ID: 3101377CWG
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDNPYQDGR GNKDASITNT KGMGTMTPAH RKSGPTTKVD GGPFLIGDTM TGGYGKGPDI
61 LHDCTIAVNP GEIAVIVGPN GAGKSTAMKA VFGMLDVRSG SVRLDGEDIT RLTPQDRVVK
121 GMGFVPQTNN IFTSMTVEEN LEMGAFIRRD DIRETMEQVY DLFPILREKR YQAAGELSGG
181 QRQQVAVGRA LMTKPKVLML DEPTAGVSPI VMDELFDRII EVSRTGLPIL MVEQNAKQAL
241 AIADKGYVLV QGRNAFTGTG KELLEDPEVR KSFLGG
SEQDB ID: 3101377CWH
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCPGCFNDKR PHLFSGDEAT TNKAAKHKAA PGEHMIVVED VHKHFGGFHA VDGATLEITK
61 GSVTGLIGPN GAGKTTLFNV IAGVLPPTSG KVTMDGEDIT GLPPHELFHK GLLRTFQIAH
121 EFSSMTCREN LMMVPGGQSG EALWNTWFGR KRIADEERAL RAKADEVLEF LTIEHLADHK
181 AGQVSGGQKK LLELGRTMMV DAKIVFLDEV GAGVNRTLLM TIADTILRLN KERGYTFVVI
241 EHDMDFIGKI CDPVICMAEG RVLAQGTLDE IKANEHVIEA YLGTGLKNKA QLEAGA
SEQDB ID: 3101377CWJ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic substrate-binding prote
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKLLTATAA SALMASAAFA GGHAKEVKIG VILGFTGPIE SLTPSMADGA ELAMKEVTDS
61 GLLLDGATVT SVRADSTCVD AAAATAAAER LVTSDKVDGI MGADCSGVTG AILSNVAVPN
121 GVVMISPSAT SPALSTADDN GLFFRTAPSD ARQGVVMTEV LMEEGIKEVA LTYTNNDYGK
181 GLADSFQAAF EAAGGTVTIS AAHEDGKADY SAEVGALAAA GGDRLVVAGY VDQGGSGIVR
241 SAIDSGAFDT FHFPDGMIGA KLEENFGDEI EGSSGQHPGT DSPGVAKFSE MVGGAFDSTS
301 PFTPEAYDAA ALIMLAMQAA NSKDSGDYKD HVMHVANAPG EKIYPGELAK ALQIIKDGGE
361 VDYVGATAVE LIGPGESAGN YRQITIEGGK ITTAKFR
SEQDB ID: 3101377CWK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFARISCVI LTVAALLTSD RAGAELSSRA GPLKVEMMAE GLDSPWAVAP LPGAGFLVTE
61 RGGDLLYVNG AQRVRVSGTP RVRVAGQGGL LDVTLARDFA SSRRLYLTYA QPQPGVGAGT
121 AVAVARLSED KRRLTGLSRI YEVPPGGQGG RHFGSRVVEA ADGTLFVTLG DRGADASAQD
181 PGNPQGSVIR IHPDGRIPSD NPFVGQSGIR PEVWSLGHRN PQGAGLDAQG RLWTSEHGAR
241 GGDEVNLIRP GANYGWPVIS YGRHYSGARI GEGTHKEGME QPKFHWDPSI APSGLLVYSG
301 TLWPAWKGDI FVGSLKFDHI VRLTGSPLRE AERIEGPETE RLRDIVEAPD GAIWFISEGR
361 GAVYRISPAS
SEQDB ID: 3101377CWL
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MESGQKKPQR FVFVLLDQFT MLCFACAVEA LRIANRMAGQ QLYEWSVVGE GGASATCSNG
61 TVFKLDGDLE ELRREDVVLV CGGIDVQKAT TKKVVGWLRR EARRGPVIGG LCTAGYTLAK
121 AGLLDGKRAT IHWENQDSFV EEFEEVTLTK SVFVIDGARI TTAGGTASID LMLKLIANTH
181 GEELANAVAD QLIYSSIRTD QDTQRLSTPT RIGVRHPKLS QVIQMMERNI EEPISPALLA
241 KDVGMSTRQL ERLFRRYLSR SPKRYYMELR LQKARNLLMQ TDMSVINVAL ACGFASPSHF
301 SKCYRAHYNT TPYRERGAQS TRLSV
SEQDB ID: 3101377CWM
Reference:
3101377
Name: 3-deoxy-7-phosphoheptulonate synthase, Class: EC2.5.1.54
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTIAEMRAM SEWQKSNWRA KPRVQMPDYT DQAELARVEA QLSQFPPLVF AGEARRLKRH
61 LGAAGRGEAF LLQGGDCAES FDQFSADGIR DTFKVMLQMA MVLTFGAKVP VIKVGRMAGQ
121 FAKPRSAPTE VLDGVELPSY RGDIINELAF TPEARMPNPQ KMLQAYTQAA ATLNLLRAFS
181 TGGFADMNRV HSWTLGFTDE QDVQKYSEIA DRIQDTIDFM GAAGITADTT HQFSTVEFYT
241 SHEGLLLEYE EALTRLDSTS GNWLAGSGHM IWIGDRTRQP DGAHVEYCRG VLNPIGLKCG
301 PTTTAEDLKV LMAKLNPENE EGRLTLIARF GAGKAGDHLP RLIKAVREEG AKVTWVCDPM
361 HGNTIKSASG YKTRPFESVL REVRDFFAVH QAEGTVPGGV HFEMTGQDVT ECTGGVRAVT
421 DEDLSDRYHT ACDPRLNASQ SLELAFLVAE ELTRLRADQR RRAAG
SEQDB ID: 3101377CWN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVMKTFFGGR SRADRGDGAG NVIAMDRFRS GRTVSPLRQA EAYWSALRVG DGVPRRSDID
61 PRGLENILEY TFILERIAPG VARFRLAGSH LSEMAGMEVR GMPLTAFFTA AARSEIGATL
121 EHVFDTPAIC EMSLRAERRF TAPRVEARMI LLPLQSDFGD VSRALGIMIS DGPLGTGGRR
181 FEISESVLRD LPEVAQPDAA SAAPQAAGFA APQADFVKGK PQLRLVSSEE
SEQDB ID: 3101377CWP
Reference:
3101377
Name: yicC family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRSMTGFAS ARGEMAPFSW SWELRSVNAK GLDLRLRVPD WLEGLETAIR ADLGKALGRG
61 SVTLSLRLSR GEEGAALALN PAALSAVLDA LSEVEDQAMT RGMTLAPSRA ADLLALRGVL
121 EAGGGSDDPA PLVKRLKAEL GPLIAAFLQM RETEGAALAE ILQGNLIRVA DLTAQAAALA
181 EARKPLVAET LRANLARVLD NTDGADPDRV AQELAMLAVK ADVTEELDRL QAHIKAARDL
241 LAKGGAVGRK LDFLMQEFNR EANTLCSKSQ NADLTGVGLE LKAVIDQMRE QVQNVE
SEQDB ID: 3101377CWQ
Reference:
3101377
Name: guanylate kinase, Class: EC2.7.4.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gmk
Sequence:
1 MTDRRGLLII LSSPSGAGKS TLARRLMSWD PGLKFSVSAT TRAPRPGEEH GREYYFLSED
61 QFKGQVRRGE MLEHAHVFGN FYGSPAGPVR DTIEAGQDVL FDVDWQGEIQ IRNSDLGKHA
121 LSIFILPPSI KELRRRLESR GQDSAEVISR RMLKSWDEIS HWGYYDYVLI NDDLDATEER
181 LKTIVSAERM RRIQQPALQE HVRKLQSEFE DLS
SEQDB ID: 3101377CWR
Reference:
3101377
Name: bacterial transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIYALGEHR PEIHPDTWVA PDANLIGKVV LEEGASVWFG CTIRADHEEI RIGQGSNVQE
61 NCVMHIDAGY PLTIGANCTI GHKVMLHGCT IGENSLIGMG ATVLNGARIG RNCLIGAGAL
121 ITENKEIPDN SLVMGVPGKV VRQLDEAAVA RIAWSAKHYQ DNMRRFRDSM IAVG
SEQDB ID: 3101377CWT
Reference:
3101377
Name: phosphate regulon sensor His kinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEDLNHEFL AAMPLAALLV DQAERIIAAN TEAQTLLGQQ IVGRHYATIL RQPQVIEAIE
61 RALRDKGSSR SRHLANDGAQ DTTFEVTCRY VNGIGAVAGG AVLVSFIDVT PMEQAGQMRR
121 DFVANVSHEL RTPLTAIMGF IETLRGPARN DPAAQDRFLG IMEQEAGRMN RLVGDLLSLN
181 RVESEERVRP RGAVDLSGQI ASTLNSLRPL AAEAGVELYF TGPETPVIVP GDEDQIRQVL
241 TNLIENAIKY GGSGGEVRVT LSEAERDPAV RGPAARIQVS DKGAGIDAVH LPRLTERFYR
301 ADNHRSRQKG GTGLGLAIVK HIVTRHRGRM RVESTLGSGT TFTVILPK
SEQDB ID: 3101377CWU
Reference:
3101377
Name: phosphate ABC transporter, Subunit: periplasmic phosphate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFVKLSASA LAIAAVSATA AAARDQVQVA GSSTVLPYAS IVAEAFGENF DFPTPVVESG
61 GSSAGLKRFC EGVGENTIDV ANASRKIKDK EVAVCAENGV TDIIEVRIGY DGIVFASDIA
121 GNTFEFTPSD WFLALSDKIM VDGQLVDNPN STWADVNAAF PAQPIQAFIP GTKHGTREVF
181 EDKVILAGCE ATGAFEALKA ANGDDKKAAE KACIALRTDG VSVDIDGDYT ETLARIESNK
241 DGIGVFGLAF YENNTDKLQV ATMSGIVPST ESIATGEYPV SRPLYFYVKK AHIGVIPGLK
301 EYAEFFIADE IAGPDGPLAE YGLVSDPELA KTQEAVADEK VIGGNS
SEQDB ID: 3101377CWV
Reference:
3101377
Name: phosphate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pstC
Sequence:
1 MMPTLWLVLF LLLLSTFGFF AGRARALSSA GGDARKLHSL PVYYGLNVAL TGLVPALGVL
61 AVWLLAQPML IDNRVSGLIP EDSIPAELTR DLVMSDVRRV AEGLDVAVAQ GALSEAEVGA
121 LKAGSSGIRA RLGEVGVALG SDVRPEVLAA ARTYRALSHT GTLVMGAVVA GLALAGLAWS
181 YMRTHHDYRA RNVVERGVLA LLILAASLAI LTTIGIVLSM LFETANFFGL HDWRDFFFGS
241 TWAPNFRGDS ELSILPLLWG TLFISLIALL VSVPVGLFAA VYLSEYAGKA TRSFAKPLLE
301 ILAGIPTIVY GLFALLTVGP MLADIFGNGG ALGVNWMAGA TSVLTAGVVM GIMLIPFVSS
361 LSDDIINAVP QSMRDGSLGL GATRSETVRS VVLPAALPGI VGAILLAASR AIGETMIVVM
421 GAGAIAKFSL NPLESMTTIT TRIVSQLTGD TDFASPETLV AFALGLTLFV LTLGLNVLAL
481 YIVRKYREQY E
SEQDB ID: 3101377CWW
Reference:
3101377
Name: phosphate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pstA
Sequence:
1 MTDLTPDAAP GRRHAASLLT PDARTRRRNR AEARFRAYGM GAILIGLMML AVLVFTIVSR
61 GTGAYTQTFV TLDVELLESK LDKKGTRDIE AIKKVSTFGY APLINAAFET AMDKAGIETA
121 LKPKDQAAIL SKRAAAQLRD YVIADPERIG QTVSFRFLAN SRVDGYLKGR VTRESIANDK
181 SISTEQLDFV DQLIAAGMIR KTFNLDFILG SDASDQRPEA AGMGVSMVGS LFMMLVVLVL
241 ALPIGVAASI YLEEFAPKNW LTDVIEVNIS NLAAVPSIVF GILGLAVFIN YMHLPMSAPL
301 VGGLVLTLMT LPTIIISTRA SLKSVPPSIR DAALGVGASK MQAVFHHVLP LAAPGILTGT
361 IIGLAQALGE TAPLLLIGMV GFIASNPPDG IAAGLLSPNS AMPAQIYEWA KRADPAFYER
421 AWGGIIILLV FLVTMNTLAV ILRRRFERRW
SEQDB ID: 3101377CWX
Reference:
3101377
Name: phosphate ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pstB
Sequence:
1 MNAAGRRRQT MNDMSRVERA VESKQTKMEC RDCHVYYGDT HAIKNVNVDI ADKTVTAFIG
61 PSGCGKSTFL RCLNRMNDTI AGARVQGSFQ LDGEDIYDKR VDPVQLRAKV GMVFQKPNPF
121 PKSIYDNVAY GPRIHGLARN RAEMDEIVEK ALRRGAIWDE VKDRLDAPGT GLSGGQQQRL
181 CIARAIATEP EVLLMDEPCS ALDPIATAQV EELIDELRQN YSVVIVTHSM QQAARVSQKT
241 AFFHLGQLVE YGETGQIFTN PEDPRTESYI TGRIG
SEQDB ID: 3101377CWY
Reference:
3101377
Name: phosphate transport system regulatory protein, Isotype: PhoU
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phoU
Sequence:
1 MAQQHITSVY DRELEAIQAH IMKMGGLVEA AIMAAARSLE TRDAELANEV RAGDKAIDAL
61 EELINQETAR LIALRAPTAS DLRLVLTVLK IAGNLERIGD YAKNIAKRTT VLVDQPQVGD
121 SAAALRRMAR EVELMLKDAL DAYIQRDAEL GADVIERDHE VDQMYNALFR QFLTFMAEDP
181 RNITPCMHLH FIAKNVERMG DHVTSIAEQV VYLVTGNRPD EMRPKGDVTS TTA
SEQDB ID: 3101377CX
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTRVFAAAA LALSCSVPAW AADRAAVLTT YADIAEAKYQ DSLITARALQ VAVDALIADP
61 SAQTLAAAKQ AWLAARDPYQ QTEVYRFGNA IVDDWEGKVN AWPLDEGLID YVDASYPGAS
121 DENGYAALNV IATPVFDLSG TTVDASQITP ELLSGTLHEA DGVEANVATG YHAIEFLLWG
181 QDLNGTGPGA GNRPWTDYAP GADCTGGNCD RRGAYLQAAT DLLISDLEWM AAQWAPGGDA
241 RTSVTADETA GLVAMLTGMG SLSYGEQAGE RMRLGLLLND PEEEHDCFSD NTHNSHYFDG
301 LGIRNVYLGS YTRVDGTVIS GASLSDLVAD ADAALDAEVK DRLNITMDAL GAIRSAAKGG
361 FAYDQMLARG NAEGEALIMA GVDGLVEQAR SFQRLFPVLG LDDIAFEGSE SLDNPGAVFH
SEQDB ID: 3101377CXA
Reference:
3101377
Name: phosphate regulon transcriptional regulatory protein, Isotype: PhoB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phoB
Sequence:
1 MSADQPSVLV VEDEMAQREV LAYNLEAEGF RVIRAENGEE AMLLVDEDTP DIIVLDWMMP
61 NLSGIEVCRR LKTRPETRSI PVIMLSARSE EVDKVRGLET GADDYVVKPY SVVELMARVR
121 SQLRRVRPST VGLRLEYEDI VLDAETHKVS RSEKPLKLGP TEFRLLSTFM EKPGRVWSRE
181 QLLDRVWGRD IYVDTRTVDV HIGRLRKALT QHGGDDPVRT VRGAGYALG
SEQDB ID: 3101377CXB
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTSRKFFPS LSSLRALEAL DRLGSASAVA EELALTQSAV SRQLQTLEGQ MGVELIRRDR
61 KRLSLTPAAQ DYVTEIREAL NRIAQASLRL QVAPAGGTVN LAILPTFGMR WLMPRLPEFS
121 RLHPDITINM TTRLRPFNFA SEPFDAALHF GEPDWPGTDR LLLRAERVLP VCAPGLLPHG
181 APKSPADLLR LPLLHIQTRP RAWQDWFAQM GVTCPETLPG TLYDQFATIG QAALHGLGVA
241 LLPNYVVEQD LATGRLVAAY PDAVETLGAY YLVWPRARGN DPSLRAFRHW LAAQAEPEEG
301 LPR
SEQDB ID: 3101377CXC
Reference:
3101377
Name: glutaryl-CoA dehydrogenase, Class: EC1.3.99.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gcdH
Sequence:
1 MKTRKSLAVF LRFGKDMVPS DRISGVFPMD IAAKPALRDK DKPDLGGFDW EDPFRLADQL
61 SEDERMIADA ARAYAQEKLQ PRVTQAFQTE HTDPDIFREM GEMGLLGTTI PEQYGGIGAG
121 YVTYGLVARE VERVDSGYRS MMSVQSSLVM YPIYAYGSEE QRMKYLPKLA SGEWIGCFGL
181 TEPDAGSDPA SMKTRAVKTE GGYRLTGTKM WISNAPIADV FVVWAKSDAH DGKIRGFVLE
241 KGMKGLSAPK IENKMSLRAS ITGEIVMDGV EVGEEALLPH VSGLKGPFGC LNRARYGISW
301 GVMGAAEACW HGARQYGLDR KQFNRPLAQT QLFQLKLANM QTEIALGLQA SLRVGRLMDE
361 AKAAPEMISI IKRNNCGKAL EIARHARDMH GGNGISLEFQ VIRHMVNLET VNTYEGTHDV
421 HALILGRAQT GLQAFF
SEQDB ID: 3101377CXD
Reference:
3101377
Name: sulfate permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sulP
Sequence:
1 MNQQLRGLAR TYLPILDWGR SYGRGELSGD LIAAVIVTVM LIPQSLAYAL LAGLPAEVGL
61 YASILPLVAY ALFGTSRALA VGPVAVISLM TASALAPLNL SSVSEYVAAA GVLALLSGAM
121 LLLMGALRLG VVANFLSHPV IAGFITASGL LIAASQLKHI LGVPLHGHTL PEILLDLARH
181 LGQINLATLV TGIVALAFLF WVRKGLAQVF HARLGLTKPL AATLARVGPI FAVIGTTLAA
241 WVLNLPSLGV AVVGEVPTGL PPLGLSGVDW GLVPALIGPA ALLSIIGYVE SVSVAQTLAT
301 KRKQRIDPNQ ELIALGAANI SSSLSGGYPV TGGFARSVVN FDAGAETPAA GVFTAVGLLV
361 AALFLTPLLY FLPKATLAAT IIVAVLSLVD LSILSRAWRY SRADFAAVFA TIALTLLAGV
421 EVGVASGVLI SLLLFVWKTS RPHVAEVGQV PGSQHFRNIL RHKVETDPGV VTLRIDESLY
481 FANARRMEDL ILNRVLRDRD SLRHVILMCS AVNEVDFSAL ESLEAINRRL DDLGVKLHLS
541 EVKGPVMDRL ARSHFLEDLT GRVFLSQYDA FAALRMNRAD RM
SEQDB ID: 3101377CXE
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELKDRIVVV TGAASGIGRG LAERFAAEGA KCVVCADLNL QGAEDVAQAV GGVALRCDVS
61 READIAALIE HVETQIGPID LFCSNAGILT IGGIETPDAD WQRIWDINVM SQVWAARHVV
121 PRMIARGGGY LLNTASAAGL LNQVGAAPYG VTKHASVGLA EWLAMTYGDD GIGVSVLCPQ
181 AVRSEMTRGH EESVAALDGL LEPSDVAEAC VQAIRDRRFL VLPHPQVLDY IRMKTADYDR
241 WLGGMRKLNR QFGGKL
SEQDB ID: 3101377CXF
Reference:
3101377
Name: acyl-CoA thioesterase, Isotype: II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDAERQLLD LLDIERLEVD LFRGTGSGGE TPTRIYGGQV IAQALAAAYR TVEDRLCHSL
61 HAYFIRPGDP SIPVIYQVDR ARDGGSFTTR RVVAIQHGRQ ILNLSASFHA GDDGWDHQHP
121 MPEISGPETH PTRQALQERF IDRIPQRYRA EFTRARPIEI REVAPRDMFE PIPTDDRHYL
181 WFRMGAAAGA GPAMQHLLLA YASDMGLLGS GLRPHGLSWY TRQVNGASLD HAMWFHAPIR
241 FENWHLYAMD SPWTGAGRSF NRGKIYAEDG TLVASVAQEG LMRRLKSEG
SEQDB ID: 3101377CXG
Reference:
3101377
Name: acetoacetyl-CoA synthase, Class: EC6.2.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMTDPRPIL WTPSNERAEN SRMAAFQRWL AKERGLEFDD YNALWAWSVA DLDGFWSAIR
61 DFAGLPFEGG DGRVLAERRM PGAVWFPGVT TNFARHMLRH AESRPEAPAL ILRSEGFGRK
121 EVSWAQLSQK VANVAAQLRA MGVGQGDRVV AILPNTDTAV VAFLAAASIG AIWSLCAPDM
181 GHVAILDRFR QIAPKVLIAQ DGYVHAGRTI DRRPVLEEIR AQLPSLAQTV LVPVMGEVPP
241 SMIPWEEMTQ GAAQPEYADL PFDHPLWIVY SSGTTGNPKP IVHGHGGILL EGAKQALHQD
301 LGGDDRFLWL TSSGWIMWNA QFVAMGQGAT VVLFDGAANH PDMQAVWRVV AEERVSSFGV
361 GAAYVTQCLK SGIRPREALD LSALKALGTT GSPLTAEGYD WVYDAVDPDI WLAPISGGTD
421 LCGAFVGGNV MLPVRAGEMQ CRYLGNAVRS YDPEGNEITA EVGELVCTEP LPSMPLGFWG
481 DRDGSRLHES YFDTYPGIWR HGDWIEITPE GGAVIYGRSD ATINRKGLRL GSSEIYRAVE
541 ALPEVLDSLV VDLEFLGRDS FMPLFVVPAP GQVLDDALRA RINTAIRETL SPRFIPNEIV
601 QIAEVPRTLS GKKLEVPVKK LLLGGDPAQV VNRDSMANPE SFDFFVTYAA GRR
SEQDB ID: 3101377CXH
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDPGYRTLD TGRLGRIAGW MQSYVDRRRY AGSSVLVSQG GHEVFFHTAG QRSIENQLPF
61 TRDTLVRIYS MTKPVTSLAV MMLAERGLFH LDAPVSTFLP SFSDMQALVP GASAIDQTEP
121 APSPTLHQLL THTAGLSYPF NPGVLARAME EQDLLFKPGQ GALADMADKV AALPLAFQPG
181 SRWEYSVSID ILGRVVEVVS GRTLAQFFQD EIFAPLGMTE TGFSVPQGAG DRFASLYTPL
241 AGDAMALNDA HSGGDTLRLF DEAGNSPFET ASMYSGGGGL VSSIDDYRRF AEMLRRGGAV
301 DGHRLIGPAT LDFMMRNHLP GDIASMGPQS FAEQPMDGMG FGLGGAVVLD PARARTPGSI
361 GDFSWGGMAS TFFWLDRVND LTVVFFTQLS PSSAYPSRSE LKALIHGALC G
SEQDB ID: 3101377CXJ
Reference:
3101377
Name: transcriptional regulator, Isotype: IclR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEGKDRNFV TALARGLDVL RSFRPGEVLL TNTDLSERTG LPKPTVSRLT YTLCQLGYLV
61 QDRQSGAYRL GVGVLQLGMG VLAGLDICDR AAEVLRGLRT GANPYITAAL GEVHRAEVIY
121 VAVSRSRENV SLSMHVGSRL PLFRSAIGRA ILVGMEAEER EAAIAAGMRD LGVPEAELRS
181 QIARAVEEYA VRGYCTGYGD WRADVNGIAV PVLSLGGARL HGLNLGGPSF HVTQEELERV
241 FAPLLIEAGR SLGMVP
SEQDB ID: 3101377CXK
Reference:
3101377
Name: phosphotransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTTQSLDL SAVDAYLRDH LPGYAGPLEA RKFDVGQSNP TFLLATPARN YVLRRKPPGV
61 LLKSAHAVDR EFRVQRALAD TDVPVPRMYL LCEDDAVIGS AFYVMEHLDG RNFAEPTMEG
121 ETNATRTAVI DEMNRVLAAL HSVDIDAVGL SDYGPPGNYF ERQISRWTKQ YRASETGTIA
181 DMDALIEALG QDMPEDDGQR TLVHGDYRID NMMFEKGGTR CLGVLDWELS TIGHPYADLA
241 AVIMQWQMPP GREGRGLAGV DRAALGLPTD DEFIAAYCAR RGIGGIDRFG FYLAFTFFRM
301 AAIIQGVYKR ALDGNASNPE RARMLGQYVG VFAQNGLRAL RG
SEQDB ID: 3101377CXL
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAELIVIRHA QASFGSDNYD RLSELGHRQS ELVGAALRET GWVPDRLVTG TLARQKETLR
61 GMGFTDVPEE HAGWNEYDFH DLLRVKFGGT IPDLVQHDRK THFRTLRDVL REWQGGGVAG
121 ARESWAQFTA RIEAARQAAT REGAERVLVI SSGGAIGQLT AAALSAPPEQ MIALNLQVKN
181 TAMSRFIFTP RAFFLHEFNA TPHFAQPAHA DMLSYS
SEQDB ID: 3101377CXM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWTRDESHL PPALRGLRIP LIGSPLFIIS VPDLVIAQCK AGIVGSFPAL NAREGEGEPP
61 LLEAWLKRIT EELDRHNQDN PDTPAAPFAV NQIVHRSNGR LERDLEICAR WNVPIWITSL
121 GARVEVNEAA HSCGGVVLHD VINNTFAKKA IDKGADGLIA VAAGAGGHAG QQSPLALIRE
181 IRSWFDGPLA LSGAIACGES LLAARALGAD FGYMGSPFIA TNEANAQPEY KQMIVDSTAE
241 DIVYSSLFTG VHGNYLKKSV ERAGMDPDNL PSADASSMNF SQGSSKPKAW KEIWGSGQGV
301 GDVHQIEPVG DLVDRIDREY RAAGARLAAE FIG
SEQDB ID: 3101377CXN
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIRFDGRVA IVTGSGAGLG RAHALGLAAR GARVVINDLG AATDGTGASS DAAQAVVEEI
61 RAMGGEAIAH GADVADEAQV ADMVAQTMAQ WGRVDIVVNN AGILRDKTFA KMSMADFRKV
121 IDVHLIGSAN VAHACWPIMR EQGYGRVVFT SSASGLYGNF GQANYGAAKA AMMGLMNVLH
181 IEGARDNIRV NCLAPTAATR MTEDLIPEQA LALLAPETIT PGLLYLVSED APSRVILCAG
241 AGCYAQTLIF ETEGILLEGD ANTPEEIAAR FAQVQDEEGK RELTDAFSQT RKFARKAADA
301 RGIDLPWGA
SEQDB ID: 3101377CXP
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPETLFSLH GKTALVTGGA TGIGRMAAEA LVCAGARVLI ASRKGEACEA VAAELNAMGA
61 PGTAEGFAGD VGSKEGIDTL VAEVKSRTET LDILMNNSGV TWGAPLGQFP HEAWEKVMSV
121 NVAGVFDLTQ KLLPMLMKSG TIDDPARVVN VGSVMGEVPM GDGAYSYAAS KAAVIHLTKI
181 MAKELSPYAV TVNALAPGPF VSRMTAFATA DEEKRAKVGS DVPLRRVGRD EDIAGCMLFL
241 CGRGGSYVTG AVIPVSGGIN VMSGRNIFEK AL
SEQDB ID: 3101377CXQ
Reference:
3101377
Name: acyl-CoA dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKLVRSEEE VMLADAARGF LDQAAPVAHL RRLRDGEQTQ DRALWSEMAA MGWAGVLVPE
61 EAGGSDMGHA AACALAGEMG KTLVASPFLS TAVIAATALR QVSDARAGQA LARIASGELT
121 YALAIDEGAK FAPEATQMQA QAEGNGFRLN GEKRFVVDGA NADRLLVLSR TDAGLTLFDL
181 PAERDGITRE AQAMIDSRDA ARITFSDVIA TGEDVLGQVD DAMSVLAPAL RAGQAALAAE
241 MAGLAAGAFG MTVEYLKERK QFGVPIGAFQ ALQHRAAHLW CECEVTASAI LNAGRMLDED
301 PDNAALAVSL AKARATDTAQ RAVQEGVQMH GGIGMTDAFD MGFYMKRARV GAEWLGDYGY
361 HANIVAQARG F
SEQDB ID: 3101377CXR
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEEDKAIAA FRDELRAWLE ANCPADMRDG RNDEASICWG GKNWNFTSEA QRTWLQRCVS
61 KGYTVPTWPI EYGGAGLSRD QEKVFHQEMR RLNARYPLQS FGIWMLGPAL LHFGTHEQKL
121 HYLPPIARGE IRWCQGYSEP GAGSDLANVQ SRAEDRGDHW LVNGQKIWTS YADQADWIFA
181 LLRTDREAPK HKGISFILLD MTSPGVTTRP IKLISGASPF CETFFDNVQV PREQVVGEVN
241 RGWDVAKYLL THEREMISAA GGSMGSGRAL GAVLADSGST DTVLRADAMR AEVDGLAVAL
301 TLERYKDQAE AGQGAGDASA MLKYMGTELN KRNLELVMAA GGSDALIWED GRAPNWLRTK
361 ANSIEGGTSE VMLSIISKRV LGLPG
SEQDB ID: 3101377CXT
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAMLSTAVG GPETLELTEM ADPAPGKGEL LVRVHAAGVN FPDTLMIRDL YQMKPPRPFA
61 PGGEIAGEVL AVGEGVSGYT PGDRVLALTG FGGFATHLTV KANVAVKIPD AMPYDEAACF
121 IFTYGTSHHA LKDRAALQPG ETLLILGAAG GVGAAAIELG KAAGARVIAA VSSQEKAEFC
181 RQIGADETLV YPRELDRDGQ KALSGEIKKL AGGDGVDVVY DAVGGAYAEP CLRAMAWQGR
241 YLVVGFPAGI PSIPLNLTLL KGCQIVGVFW GASVFRDPKG HAANVGDLFR LYAEGRIKPQ
301 ICARFPLDQA GAALEMMQDR KVLGKVVITP
SEQDB ID: 3101377CXU
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTREYRQTVY APPAGAVDLL LIRHGESQPA RPGEPFPHVD GQGDPALHPE GEAQAHAVGT
61 RLKGEPLAAI YVTTLRRTHQ TAAPLAAHLG LAPLVEPDLR EVFLGDWDRG EYRIRAANDD
121 PAFLRARERQ EWGEIPGAET TAQLHARVRA GLLRIAARHP DQRIAAFVHG GVIGAAMAMA
181 SGAEPFAFHG AANGSISRLV IQGERMVVRG FNDVAHLS
SEQDB ID: 3101377CXV
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQNEIDTGS ELLMCGLADG VATLTLNNPE RRNALSGDLP QALGRMLALL DDDPRARVLV
61 LTGAGGAFCA GGDITSMGAA LGDGAQPDAD AMTRRLRQAQ DDIALRLARL SKPSIAALPG
121 AAAGAGMSLA LACDLRVSGH SGYLLPAFGG IGLSGDFGGS WLLARLIGPA RAKEVYFTNR
181 RICADEALAL GLVNRVVADA DVLGEAQALA AQIAGFAPMA LRYMKENIDR AGDVDLRQAL
241 DIEADRMIRT LLSDDHREGA RAFAEKRRPR FSGA
SEQDB ID: 3101377CXW
Reference:
3101377
Name: nodulation protein, Isotype: N
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERTATMTPL EQALRQEQAS IGQEIPASNW ITVDQAMIDR FAEVTMDDQW IHVDPARAAA
61 ETPFGGSIAH GFLTLSLSSR FVYDVLAPLP GQVMGINYGF DKLRFLAPVP AGARLRGHFR
121 LIEARQRSAT ELLRKYALTV EIEGSGTPAL AAEWLTLSLF EQALPKAN
SEQDB ID: 3101377CXX
Reference:
3101377
Name: 3-dehydroquinate dehydratase, Isotype: II, Class: EC4.2.1.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroQ
Sequence:
1 MMTSILVLHG PNLNLLGTRQ PEVYGTTTLE MVNSACIAHG QSRGLSVACL QSNHEGALVD
61 AIHAAKGVHR GIVLNAGAYT HTSIALRDAI SSVELPVVEV HLSNIHAREA FRHVSHIAPV
121 ALGQICGFGA QGYLLALDAL AAHLSPEGAR
SEQDB ID: 3101377CXY
Reference:
3101377
Name: autoinducer-binding transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNYLEKLSY VRTLEELWDG HTRQMAEYGF DRLLYGYTNY RTATSLGDPE DFVILTNHDQ
61 SYIDGFMQEG LYFHAPMLHW ALEHEGAGSW RMISDMLDSE TLTPQERRVY AFNAEHGVTA
121 GYTVSFTSVS ARTKGAISLC ARKGMSQDEV DALWRTHGQD ILLMNNVAHL KIMTLPYVAP
181 NRSLTRRQRE ALQWVGDGKT TQDIAILMGL TAATVEKHLR LAREALSVET TAQAVLKAAL
241 HNQMFIMEA
SEQDB ID: 3101377CY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAKLLIQES SIMTYRHFAA LTGAAALFAG AVQAQEAPGF TWEGSLELEY ARTFKSDTPG
61 NEFGAATGTL ELSGAYRFND TFSVFAALTG ESLNDPTPGD RNFTDWGLYI KELGVQIETG
121 SASFQLGKVS PSFGIAWDQT AGFFAADLAE DYELTEQLGA LVAVDLGAAG MLHAGLFYAD
181 DTALSRSAGF RRARNSTASG GAGNTGQLDN GAVTWIKSFG GTELRLGVRH LSRGAGDVKS
241 ENGVVASLFH SFHHMPLDLF AEVASFSGYG GTADDATYAT LNAAYALGDV TLSGTYARRD
301 IDSTGLTELF SIGAEYEFGE RYLVGAALAR VEEAGATDHV FGINFEIALG V
SEQDB ID: 3101377CYA
Reference:
3101377
Name: translation elongation factor Ts
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tsf
Sequence:
1 MAITAALVKE LRDSTGAGMM DAKKALTETD GDMEAAVDWL RTKGLAKAAK KSGRTAAEGL
61 VAVVVEGGKG VAVEVNSETD FVAKNSDFQE MVGKIAAAAL AADDVDALLA ADLGGKSVAD
121 TLTAKIATIG ENMSVRRLAK LEGETVVTYV HNAATTGMGK IGVLVAMKGG DEALGKQVAM
181 HIAAVNPAAL SEAEMDPVVV EKEKQVQMDI ARESGKPEAV IEKMIEGRMK KFVAESTLLS
241 QQFVVNPDLT VGAAAAEAGA EITGFVRLEV GEGIVVEKED FAAEVAKAAQ G
SEQDB ID: 3101377CYB
Reference:
3101377
Name: ribosomal protein S2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsB
Sequence:
1 MALPEFSMRQ LLEAGVHFGH QTQRWNPRMS PFIYGARNGI HILDLTQTVP MLDQALKAVR
61 DTVAKGGRVL FVGTKRQASG PIAEAAEKSA QYYMNHRWLG GTLTNWKTVS QSIQRLRMID
121 EKMEGGAEGL TKKERLGMER DQAKLQASLG GIREMGGVPD LLFVIDVKKE ALAIAEANKL
181 GIPVVAVVDT NCSPDGVDYI IPGNDDAARA ISLYCDLAAR AALDGMTAQL GAAGVDLGEL
241 EEAPAEEALA EEAAAEA
SEQDB ID: 3101377CYC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNDTVDGGV PAPEPGGPVP AGPPAVQAAP SAPAPAADKP KPAGWRATLS NLSSLIKDFG
61 IVAAIVATPI AIVVVLIWEG VLRPRLTSEI MTELSRPDDG YRAWHRDNVI GALSGYDQIT
121 ARKWLEAEGG PVIERLARPP EAEEIKALFA DPEFRKFFQR QVLLSVSDFR DDYVEYLYRE
181 YGETNMLKAW LSPVTDQVDA VYTLNLFYQK TPVQGDDGRQ AVNEAGVPLY DTTFKISDQF
241 YATDDQLFHI NVRPETKGGF YDIFRQEAAV LTITIGNFTQ NINVNGYQDD VTCIVRTALN
301 NAPSGFVTVR ANIKRSGPLD PNNPVTLDGQ VPDGGFDMKI IVTAKKGRKT C
SEQDB ID: 3101377CYD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLMHRLLALL LSLLALPALA QEARWQPLAG FDKVWTKQGA TFDGPETGRF EYDALRFGRE
61 VPLYEYEFFD MEDLFNRAYR NRAAKGVLVD AATGGARILS PTMAEAWLAV RDDPAVVAVV
121 PMGFARVAGD TRVVGYRRIN GRDMQSMFFA RNLDAILCLN DMARRNAESY DGQVPFLFGL
181 NFKGRATYSY VEGLDMVNLA DGASPQRFLE TFTACSDLLQ LGRRVIEPRD YSRLGGRQGR
241 IALDRAASGE IKPTERIVLL YDRFGHMNFV RTRQPTGIYE LGRLLSSDGF YDSEPCAYPE
301 KAEYRGRSLS CELWAVTIAA FDGAAIAVRQ GDKAMFWGDP GRYAPGVLVI RRKTPPARPQ
361 VTTAPSPARA APALPLAPAP KLQQRLLPVD
SEQDB ID: 3101377CYE
Reference:
3101377
Name: acyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPLWDSEDD PDPIEIGTIG WLLVLARGVP LALLVFGGLI VLLLVRLVER PLCGLHRPVT
61 PHITQFVCRN AFRILGIGFE SSGELMREHG AVVANHTSWL DIFALNARKR VYFVSKAEVA
121 NWPGIGWLAR ATGTVFIERN PKQAREQTRI FMERLGVGHK LLFFPEGTST DGLRVLPFKT
181 TLFAAFFAPE LRSTMYVQPV SVVFHAPKGQ PDRFYGWWGD MEFGPHLLKT LAARRQGRVE
241 LIYHAPARVS DFDNRKALAA HCEEAVRHAH SLARLTP
SEQDB ID: 3101377CYF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDHGPAFTV KIAETEAELH AAQRLRYDVF VRELGGSGAL VDHQAGLERD RFDPFFDHML
61 CINNRSGQVV GVYRLLRDEQ AQSAGQFYSE DEYDLGVLKR SGRRLLELGR SCVHPDYRGG
121 MAMYHLWNGL ADYVEQHGIE VLFGVASFHG TDVEALAQPL SMLYHNHLAP EDLRVRTQPA
181 HYVDMNRITP EALDRRRAML EVPSLIKAYL RLGGFVGDGA YIDHAFNTTD VCLILDTARM
241 NERQRRIYGG G
SEQDB ID: 3101377CYG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MICVTERLTA GQARAFVLQT LRKPRYLRAT TIDPPETHA
SEQDB ID: 3101377CYH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGHAIPPLSD LTSSRQGPDM TDLNAILAPG MFVRHPDYPD WGTGQVQSSI AGKITVNFPD
61 QGKVVIDGTR IALLVVFDP
SEQDB ID: 3101377CYJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQSGVNLAS LIGSRICHDL ISPIGAITNG LELLDMTGSV EGPEMELIAD SVGNAGARIR
61 FFRIAYGASS DQMLGRAELV GLLDDLNRSA RAKADWAPTE PVTRAEVRMA FLALQCCETA
121 LPFGGSVRMD QQGDRWIVTA EAEKLSVDPA LWEGLSNPAA LKQVTPAQVQ FALLPAVAED
181 AGRRVTVETS DRQLVIRF
SEQDB ID: 3101377CYK
Reference:
3101377
Name: gamma-Glu phosphate reductase, Class: EC1.2.1.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: proA
Sequence:
1 MKDIADISAT MTELGKRARA AAAQLAFASA EAKRAALIGA ADAVWARRGE IIAANARDLE
61 FGRDKGLSPA MMDRLMLDEA RIQGIVDGLR TVADQDDPVG EVLAEWDMPS GIHIQRVRTP
121 LGVIGVIYES RPNVTADAGA LCLKSGNAVI LRGGSESFHS SGAIHACLVA GLRAAGLPED
181 AIQLVPTRDR AAVSELLTMT DYVDVIVPRG GKGLVGLVQR EARVPVFAHL EGIVHIYIDK
241 AADPEKALRV VMNAKTRRTG ICGAAECLLI HKDIADNLGA DLVRALIEAG VEVRAEGLPG
301 SLAATEADWG KEYLDMIIAA KVVDDVDAAI AHIRQYGSNH TDCVITEDDA VAARFFERLD
361 SAILMHNAST QFADGGEFGM GAEIGIATGK MHARGPVGAA QLTSFKYLVR GNGTTRA
SEQDB ID: 3101377CYL
Reference:
3101377
Name: Glu 5-kinase, Class: EC2.7.2.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: proB
Sequence:
1 MATLTTARRL VVKIGSALLV DRNTGDLRAD WLHSLAADVA WLKGLGLDVI LVSSGSIALG
61 RGVLGLPRTA LPLEQSQAAA AVGQIRLARA YEEALAPHRI TTAQVLVTLE DSEDRRRYLN
121 SRATLETLLG LGAVPIVNEN DTVATDEIRY GDNDRLAAQI AVTVGADQLI LLSDVDGFYT
181 GNPSDDPGAT RFDVIDRITP EIVAMAGDAG SGLSKGGMKT KLMAAQMATA GGCAMAITEG
241 SPLNPLKTLE NGANCTWFTA TLDPQAARKR WIAAMKPRGD ITVDAGAARA LEGGKSLLPA
301 GVASVTGDFG RGDPVAILGP DGRRLGQGLC RYTGDEARAI RGRQSSDIEA TLGYPGRAAL
361 IHRDDMAL
SEQDB ID: 3101377CYM
Reference:
3101377
Name: GTP-binding protein, Isotype: GTP1/OBG family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFLDLAKVY IRSGSGGNGC VSFRREKFIE YGGPDGGDGG KGGSVWAEAV DGLNTLIDFR
61 YQQHFFAQNG VPGKGQQRSG KDGEDIVLRV PVGTEILDED EETVLADLTE VGQRVLLAKG
121 GNGGFGNLHF KSATNQAPRR ANPGQAGVDR TIWLRLKLIA DVGLLGLPNA GKSTFLAATS
181 NARPKIADYP FTTLHPNLGV VGVDNVEFVI ADIPGLIAGA HEGRGIGDRF LGHVERCAVL
241 LHLVDGTSGD LVEDYHTIIG ELEAYGGDLA GKPRVTVLNK IDTLDDEERA FLVEELETAS
301 GGPVMMMSGA SREGVTEVLR ALRARIDANR LREKPVEESQ PWQP
SEQDB ID: 3101377CYN
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFDTIINQP VIETERFDLR PLRKSDMGLI EHYARDERVA RMTTSIPHPL PPGMAEGFVA
61 RAMSEERTED VWAMDATRDG GPELMGLISL ERMDRNQSEV GYWVAPVFWN TGIASMAVEA
121 LVNANPLGNA TMFASVFQDN PASARVLTHC GFQYLGDAES YSVARDAAVP TWTYSRKL
SEQDB ID: 3101377CYP
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGDRQGLPVP FLVFHRSLTG RPQMAVATTS FLLFAAAQVG TPGPANMALL ATGARYGFRA
61 ALPFVAGVAL GKQLVIWPVG FGLMELADRV PLLFQALKYL CVAYICWLAW KIANLRLAPG
121 GGGDGAAPGF GAGLLVHPLN PKAWAMIVTG FAGFVAPGTA AFQATLTVAL GLLACQAVFH
181 PLWTFAGDRI AAVVAGRPGE KYLMWMLAGL TVASVIFGVF GGGAQK
SEQDB ID: 3101377CYQ
Reference:
3101377
Name: ribosomal protein L27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmA
Sequence:
1 MAHKKAGGSS RNGRDSIGRR LGVKKYGGEA VGAGNILVRQ RGTKFWPGEG VGMGKDHTIF
61 ATVDGAVKFH KGLKKRTFIS VLPVAEAAE
SEQDB ID: 3101377CYR
Reference:
3101377
Name: ribosomal protein L21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplU
Sequence:
1 MFAVLKTGGK QYKVQAGDVL RVEKLAADAG EKVQFNDVLM LGGDAPVVGA PLVDGAAVQA
61 EVIDQIKGEK LIHFVKRRRK HSSQRTKGHR QKLTLVRITE ILTSGADKTG VKAATGQAAA
121 GAAAPAAAAP AAAGSDDLTK ITGVGPAAAK KLVEAGIGSF AALAALSDEQ IAAIDAVKVK
181 PEWVEQAKEL AQG
SEQDB ID: 3101377CYT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRRGGVVLC LWLAAPVAAE QPFDDLARAM RLDEVVAILR DEGLGYGATL DAEFLGGSGG
61 AFFTAQVDRI YAPDRMQAAL SGALADHLDT EQAAAATAFF RTETGQAILT LENSARRAFA
121 DDGIEEMALE RAERAGEDDT RLRQVAAYVA ANDLVGQNVK GAISADFQFY RGLSDGQDLD
181 RDDGAVLASL LEARDETEAE TRRWVMGFLY FAYAPLEDAQ MQANIDFSQS AAGQALNAAL
241 FDGFDRLYGE ISYDLGRAVG FALKASDI
SEQDB ID: 3101377CYU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLFRGALP LVLGSLFLVL ALALPLRAAD RARIEAFLVT TGFDVALDSI AQASASAPGM
61 LGLEAESFGS QWTTLTREVF DTGVMRGRAL DILEQTLSDT ALDHAVGFYA SDLGQRLVVA
121 ENAAHMADDD LKEEAGEAIV SELVRHGSTR IESLKRMNRA IDSSGTALRA LQEIQLRFLL
181 AASAAGVIEL QMETEDLREL LRSNETEMRN ALQLSALASA AYTYQAFSDH EVDTYTEALE
241 QPLMQEVYEL LNAVQYSIMA DRFEVLAVRM ADLQPVQDL
SEQDB ID: 3101377CYV
Reference:
3101377
Name: type I secretion membrane fusion protein, Isotype: HlyD-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADPKSKRRT WTTGRPFAVT VFSLIFLLGC LAVWSTRANI SGAVIGSGTI EVSTTMTAVQ
61 HPIGGVVSEI NVRNGDRVRA GDILVQLDSR QFHSDLNVVE GELFEVLANI ARLQAIMDNR
121 RQMELTPVLA EAVQTKPEVK LLVERQQQQL TAHFEAITSG MHLLDEQITQ VRAEIAGVEA
181 QLAAKLDEID LLSLEIENAE QLAERKLITM SELYKLKKDD VTIRGEIGQN EAKIAELRGK
241 ISELNLKRLV VIPDAQEKAE EELRKLRPLR VRFMEMRLSL LDDLSKLEIR APVNGKIHES
301 QVQGRRSVIT AAKPLMMIVP DDDPYQIGVR IAAADIDQVF IGQEASIKFR AFNARDLPII
361 LGSVSRISPD VTLDPLTKKY HYEVKVALNA GEEAKLNGRE LLPGMPVEAY IATESRTAIN
421 YVVRPIKRFF DRALRDT
SEQDB ID: 3101377CYW
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding/permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNSAKALRGS ARRAVRKGGL ILSAAFLLSF AVNLLRLGGP FFMILVYDRV LTSRSMETLI
61 ALFSLLIVLL LVLGTLDYAR KRLLARFGAQ FQEQMEETLL RNSGRNHVFQ HNKSKPAVGL
121 DEVDGLRGFF HSGSLIAVFD FIWTPMFLTV VFFLHPLLGW ACLGGVAVIG LLALAKAMFI
181 GGRRERAKDS AGAVNNLRNI LIASRETVRG QDMGVGFRPR WQQAREDARD EAIALKDWTG
241 WFDSMSKVTV MVVRYSVLAT GAYLTLNGAL TVGVMVAATF MVTRILGPVD RFFTQIPQMF
301 LARDHWRHLN SILASRAEEL EDDYAEQPGA LHQLVLDNVS VRSPITNNLI LRSVSLVADA
361 GEIIEINGLS SQGKTVLLET ILGMWSTSSG SVLVEGRHSS RLTDTDARNL FGYAPDNPGF
421 VAGTIEENIS GLDPEATPDK VSLAARRARM HAAISSLPEG YKTRLDPRGN CLSSFERYQL
481 GLARAFYGDP KLLLIDGLDS DMLVRIPKKL KATFDAFKKS GTTIILTSRD PSGLSNVDRR
541 FQLQDGKLTL MPKAANSKRR VTEENGAESA AERPDAERSK RPNVSVLRNV NAQDPGKTGT
601 R
SEQDB ID: 3101377CYX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLVNGGCPG KKAPVTAMWV SSRRNAAIPP GQNLFRNTSF PRRCNAVRIL QPSGHSIILF
61 TQERPSMSQK DLGFVRRSYF PTMIFQIDVP EPEDLNKKLL ASIYAERERD KKGISRSNIP
121 ALGGWHSHND LYKSKEYAEL VGLIGQATSK MSEDLGYADS HTIRIGTMWS IINPPGCVNR
181 AHVHPGCLWS GVYYIQAPEN CGNIEFIEPR TVHLMNQAKF QPNKKRSREN WTKVRYTPVA
241 GRMIIFPAWL YHAVDPNETK ETGDAGNRVI ISFNLNQVKK S
SEQDB ID: 3101377CYY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRGAAARSL VMPPRLRHPF CMTHPLRPAA PDHPARRRVH AALHNRFRNA AAALFCLCAL
61 PAVAQQRPPP FDNTAGTVFD IIRADDPTTF VCLDELGRAE RQIWDKRVDG EPVVLAYLFQ
121 SQYADGTSIE IAINPEFGSD EMAREQAELY APALGRLPTA LRAGIKRFSV HEGRRGYHAG
181 TGGIVVYAQT TENRLSYDHL EESLFHEAVH ASWDRDHRLA PEWIAAQQSD GMFLTRYGQK
241 SPEREDLAET ALFAFAILHH PDRFPPVDTQ VTRHAVPARI AYVAELLPVD RPLIWQIGPP
301 QGCAAQK
SEQDB ID: 3101377D
Reference:
3101377
Name: chromosome partitioning protein, Isotype: parB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: parB
Sequence:
1 MVSNKPRGLG RGLSALMADV TQPAEAAASE AARRPDRTVP IEKLRANPNQ PRRTFTEDAL
61 QELAASIKEK GVLQPLIVRP VDGDMYEIVA GERRWRAAQL AQLHQVPVLV RELDDTEVLE
121 IAIIENIQRA DLNAVEEAAG YRQLMDKFGH TQEKLAEALG KSRSHIANLL RLLSLPDDVQ
181 TLVVEGKLSA GHARALITSD NPSELAKIVV RDGLSVRATE ALVKKQAEGD KPTATARPKS
241 ITADKDADTR ALEKDLSAIL AMKVAINHKP GTETGQVVLT YENLDQLDDL CAKLSR
SEQDB ID: 3101377DA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNIWGPHIVQ ARRAVAIFCR GLLVLMPALS LLGLTAEAEP RSADDRQRIA AVTAPATGFT
61 VAEPFEQLPG GAATVSGDLG RDAFSRPSAN MSFERELDFH LGQALFDKLW VASPSSTKAS
121 DGLGPLYNAR SCQACHIRDG RGQVSGGPGL VLRIGRVRGD GVLPDPLFGL QIQDSAVPGL
181 RPEARIAVSQ AETEVTLNGG EVAVLRKPRY RLDAAEGTLH AESTLSPRLA PQMIGLGLLE
241 AIPEAEILAR ADPDDRDGDG ISGRPNRVHD PETGQEALGR FGWKAGAASV LDQTAAAFAS
301 DIGISSPLRP APWGDCTELQ VECRAALHGD GDPRGAEIDG PALALTAFYS RNLAVPARRD
361 VDDPDVLRGK RVFYGIGCPA CHVPKHVTAQ LSDQPEQSFQ LIWPYTDLLL HDMGAGLADE
421 LPQGLASGRE WRTAPLWGIG LTEQVSGQAR FLHDGRARTL LEAVLWHGGE AAAQRDRVIA
481 LAPEDRAALI RFLESL
SEQDB ID: 3101377DAA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSKPASTIA GWLQLNELTA GQCETLLKLA PRSLPGTGQD RQVPSPDGPA LWALAADCLS
61 ETLPELASDI LRTASQTRVD FAPDPRNYPR PFTLHMPVDG QVYVSCPLAG TPWDALTVAH
121 EFGHALQLNC CSGVQLPPVL RETAAFVAEA VVAGALALRD TPLADPVCRA YARRTLTDLG
181 PIAKRLRAAL ACPDTPYDDC WNYPPARQIA QALTQGDRPL RTGIAASVFR GDAQLGALVS
241 LLCSDAE
SEQDB ID: 3101377DAB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGLDRLVAF VAFVAFVVFI AFVVFVAFVT FVAFVVFVSL ISFVGIGLAV ALVAFVAFVS
61 FVSFVAFVAF VAFVAVVVVV DLVFFVTFVV LVVFVAFVVF VAFVAFVILV GFVAFVVFVA
121 FVGFVVFVAF AAFVFFVELV VFVVFVILVV FVAFVVFVVF VVFVAFVGFV TFVVFVVFVV
181 FVAFVVFVVL VVFVALVVFV AFVTLVVYAA FIEFVAFVVF IALVAFVTFV ELVVLIAFIA
241 FVVFVVLVVL VRFVAFIIFV VLVVFVVFVS FVTFVVFVAF VIFVGFVVLV AFVGFVTFVA
301 FVTFVVLVGF VAFVGFVTFV VFVAFVATIV DIGFVTFIAL VTVIAGAGFG LVAFVAFVVL
361 VAFVAFVVFV VLVAFVGLVA FVVLVAFVEF VVFVAFVAFV TLVEFVVFVE LVVLVAFVTL
421 VTLVVFVVQI GFVAFVAFVA FVAFITFVGF VIFVAFVVFV AVDLALVALV TFVALVAFVA
481 FVALVEFVVF VALVALVALV TFVAFVEFVV FVVFVGFVAF VAFVVFVVFV VLVGFVAFVA
541 FVVLVVFVGF VAFVVLVILV PLVILVAFVA FVVLVVFLAF YFFVAFIAFV AFVILIVGLG
601 AFVALIALVV LVAFVVLVAL VALIVIGIAG VAFVAFVVLV AFVAFVVFVA FVAAVFVAFV
661 AFVAFVAFVA FVVFVAFVAF VSFVALITFV AGLVAFVAFV VLVAFVVFVA FVAFVGLVTF
721 VVFVVFVLLV AFVAFVVVVL VTLVAFVAFV VLVTFVALVT LVAFVALVTL VGFVAFVTFV
781 VLVAFVTLVA LVALVAFVPL VAFVAFVAAV LVAFVAFVAF VAFVAFVTFV VLVAFLAFVA
841 FVAFVGLVAF VVLVALVVFV ALVGFVAFVT LVAFVAFVVL VAFVALVAFV TFVAFVAAVG
901 FVLFVAFVAF VIFVAFVAFV AFVVLVAFVV LVALVAFVGL VAFIALVAIV IVGRKADGGV
961 RTGQGQRLVD QFGQVDGQVC DVQGSGCDNG GHDGVSGENG SKIEATAMSR MAANEWVLEI
1021 HGTEKQFGKS ASKAHCCNTI RPAQSRGGSF GPK
SEQDB ID: 3101377DAC
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDITRHHTG TRMSQIVIHG DTVYLAGQVG TAGASVAQQT QDCLNQIDAL LSEAGSDRTR
61 ILQTTIWLAD MADFAEMNAV WDSWVPAGHA PARACGEARL ATPDYRVEFI VTAARAD
SEQDB ID: 3101377DAD
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTSDVLVIG GGIAGISAAA ELAAHMSVCV LEAETVPGYH ATGRSAAIFI RNYGNATLRA
61 LNAASAPFLA APDGIGTDSL LSPRGEMLIA TEDELDALDA YSAGATGLEA LTPDQAVELV
121 PILCRELIAG AIIEWDAQDI DVDRMLAGYG RLLRARGGQT VTGARVEGMR RKAGVWTVRA
181 GDTDYQAPLV VNAAGAWADG VAGLAGLAPL GLQPMRRSAA LLPAPAGHDI RTWPLFASAA
241 EQWYAKPEAG KLMVSPADED PVEPHDAWAE DMVLAEGLHR YEQAVTHQVT RVERTWAGLR
301 TFAPDRSPVV GFDPRAEGLF WLAGQGGYGI QTAPGLSRLA AALVAGERVV LDTDTVAALC
361 PARFFT
SEQDB ID: 3101377DAE
Reference:
3101377
Name: acetylpolyamine aminohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAVFDTRQW RHDPQHFMAN GAVLPNPEQP RRIEVLRAGA EAAGCVFAAP GDAGLGPIAA
61 LHSPEYLTFL QTIHARWRRI PGAGAEVIPN IHPGARTDGY PKSAVGQAGY HQADTACPIA
121 EGTWEAAYWS AQSAITGADL IIQGERSAYV LSRPPGHHAF GDLAGGFCFL NNSAIAAERL
181 RAAGLRPAIL DIDVHHGNGT QGIFYERDDV LTVSIHADPA RFYPFFWGHA QERGAGRGLG
241 YNLNLPLARG TGDDDYLDTL SVALRQVASF GSRVLVVALG LDASIDDPFQ GLAITQDGFA
301 RIGAALAGTR VPVLFVQEGG YLCDSLGDTL TRVLTGFQEA L
SEQDB ID: 3101377DAF
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLVLRIAQQ ADAAALNRAL QRLSDDLGDR HRARPVDLEQ AGWGAMPAFR AVLAEQAGEI
61 QGVALYSPLF STTQGGAGLY VSDLWSAPQL RGQRIGTRLL AAALADGRQL WGARFLKLCV
121 YDTSARARRF YDHLGFVSAG GQSNLILDEA GCAALRGEE
SEQDB ID: 3101377DAG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRILITCAI TGSIHTPSMS PYLPVTADEI TQQAVDAADA GAAILHLHAR DPETGRPSAE
61 IGHFMGFLPR IKQSCEAVLN LSTGGSAVMT LDQRLAAPKQ AAPEMCSLNM GTMNFALYPA
121 ADRISDWKHD WEEPFLRGSD DLVFKNTPRD MALILGEMGT KRGARFEFEV YDVGHLYMLR
181 HFVDRGLVQG PLFIQFVFGV LGGIGPDPEN LMHMKTVADK LFGQDYLFSV LAAGRHQIPL
241 VTMAAAMGGH VRVGLEDSLM ISRGVLARSN AEQVRKIRRI VEDLGREVAS PGEARAMLGL
301 KGADRTAF
SEQDB ID: 3101377DAH
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHLFYQGRG RKPVLDQARG VYMWDKDGKR YLDGSSGAMV CNIGHSNPNV LAAMQRQMEK
61 STFGYRLHFE TEASEKLASK LAALAPGGLD KVFFVSGGSE AVESALKLAR QYMNATGQGS
121 RWKVISRQPS YHGSTLGALA VTGYTPLSAP FEPMLRQMPK IPAPRAYLDG RDPRDPASGH
181 HYANMLASAI EAEGPETVAA FIVEPVGGAS TGALVPPAGY MERIREICDR YGILMIADEV
241 MTGAGRTGRF LGSDHWNARP DIIVMSKGLG AGYVPLGAMI ADARLVEPVL DAGGFAHGYT
301 YAGNPLACAA GLAVVEEIEG QALCANADRM GERLLARLRG LMQKHEVIGD VRGMGLLTAF
361 ELMSDRDSKA PLPKGLNAYQ RLVDIAYDKG LIVYSRRTRD GIEGDHILVC PPLIVTDDHL
421 DEIIEGLDAA LSQFADEIAG TAG
SEQDB ID: 3101377DAJ
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSVTLSNIV KRFGEFTAVH PTNLDIPEGA FVTLLGPSGC GKTTNLRMIA GLLDPTEGEI
61 LIGGRRVNDV PIHRRNLGIV FQNYALFPHK TVAENVAFGL KYRDGPRAAI AGKVQAALDL
121 VQLPDVGNRY PKELSGGQQQ RIALARAIVI EPDVLLLDEP LSALDANLRE DMRVELKRIQ
181 HQIGVTTVFV THDQSEALAM SDKIVVMSAG RVEQVGTPSE VYNTPASEFV ANFLGASNIL
241 TADCIRVDGQ GAMLEVPLFG RVPVASTKAA GVSQGAAKLV LRAEKLTLYD TSADTSALVT
301 APATVETVDY QGQTVRYFVR VAQTQLQAIN MIDERPFAEG STVTVGFRPQ DCAALQGV
SEQDB ID: 3101377DAK
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKKMDNTTR YERLRERYMN GDIDRRGFLG LLGAAGLAYG VQSPFARYAH AAADQVRFDG
61 WGGVVSEAFR KFAFDPYTAK TGIQVVDGTF GGGDEYLSRV KASQPGEYNI AHLSGVFDYA
121 RYHGLGLTSE LNEANIPNLG LVIPKLVDVF RGVTGGKLSC VPYDYGTTGL AYNRKHISDD
181 QMQEMGAKIL IDDSLKGKIG GWSDWRTRMW YAALQTGQDP NGVTDEEAAW DAVRAHRDLA
241 LKYWTSGAEL MSLLAEEEIY VTEGWSGRIY ALQEQGHDIG YMDPPNGFGW QECLFVIKGS
301 PMEACEELLN FMLAPETSIA VAEGQNYPTA LDPTKVDLGD KIPTLPAFDP TGTLSGLTFA
361 DPDYWNGHEA EWSKTFGRVQ KGY
SEQDB ID: 3101377DAL
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGWHLIRAWS IGVYIFMFLP VAVVVLLSFN ASQFGSFPMT GFSLRWFLEL WNNEAILRAF
61 RTSLVLGLMT ALISTTLGVL ASLALVRYKV PGANLISTLL IAPILVPEVV LAVALLLFLN
121 FLGVNKSFGL LLFGHVIFTL PFVILVVQAR LVSIKRDIEE AAMSLGATPI QTFFQITLPL
181 MMPAVLAGGL FAFTISFDDI TGTLFWKPGG VETVPTQIFA MLRNSISPEI NALGTVMIVM
241 TVGLPLLGAA IARQLARKRG T
SEQDB ID: 3101377DAM
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGGFAQCRQ VFTRGNPMSI ETREARQPWI LLSPALTAIM LLLFVPLSFI VVYSFWLRTA
61 TGADQVGFYL DNWAEALSDR FYRDILFSTL RIAAITTAVC ALMGYPAAYF IARSKGNKAI
121 LLLLLMLPFW ISYIIRTMSW INILGVSGAF NSVLISLGVI SEPIQMLYNE TTVILGLVHF
181 LLPFMVLNIY VSLDGIDTNL EAAANSLGAT KWQSFLQVTL PLSLPGLAAG GLLCFVLGAG
241 TYITPLVLGG PRDAMFANLV FEAIITQLNW PLGSALSLML LAVLGALVMI YNRYLGMAQL
301 MKGLG
SEQDB ID: 3101377DAN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPSHRYHP DRIARELDWN LLRTFVVLAE SHSVTDAANR LGLRQPSVSA ALKKLEDRIG
61 RKLLDRSPGH FALTDAGRLL YREAVEINGS VLRLSTLMRE LTDEVQGNVR ITVASHVVSP
121 LLDNALARFH AKHPKATLSI EVFSSADAIA EVTAKRASFA VCLVKDHNPK LEYRRLFREF
181 FGLFCGPPHP LFGKPDLSLR DLAGHSSVSF ETDRLQDVLK PVTVMRAQAE LGQKITGISS
241 HLEEVRRMIV AGLGIGPLPL HVAARDVRDG LLWQVPPYEG LPAIDVHVVW NQAAVKNRAE
301 DLLLQEILNA IDTTPMEERT YR
SEQDB ID: 3101377DAP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAMARPPSL LLLILLQVIV SAASLVVEIV AGRMLAPYVG MSLYTWTSVI AVVLAGFSLG
61 HWVGGLLAER PAERALRLTG WTLVAAALTT AAAALLLRSL SGPVLELVEH PVWGIAVLTL
121 AVFFLPSCFA GVPAPVLAAL SVQGGQGAGR ALGAMFAAGA IGAIAGTLLA GFVFISWLGS
181 SLTLMTVTAV YALSALLCFR LAGGRWLAPL LALGLILTLA VAALAAPDPC TRESRYYCIR
241 VIELGPQEAP ERLMVIDHLG HGISARDAPL TMYTDHAAML DALARIRAPR PDFSAFFIGG
301 GSYSIPRAFA LRGTGPRVVA EIDPEVTRIA AEQFWFDPAS AEILHEDARR ALLTRPERRY
361 DVILGDAFTD VAVPAHLVTH EFFDLVRDRL TPEGSYLMNV IDYRDRLQAL AALVHTLRAV
421 FPMVEVWTST TPPPPGERAV FVLVAGNSPT SHSRFVTRAP NPTEYGALDP DWVARLAATG
481 TLLSDDFAPI DRLIGRPD
SEQDB ID: 3101377DAQ
Reference:
3101377
Name: Cys desulfurase, Isotype: SufS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sufS
Sequence:
1 MYDVDRIRAE FPILSRQVNG KPLTYLDNGA SAQKPQAVID AVTRGYAEEY ANVHRGLHFL
61 SNLATEKYEA VRGIVARFLN AGSEDEIVLN SGTTEGINMV AYGWAMPQMQ AGDEIVLSTM
121 EHHANIVPWH FLRERQGVVL KWVDPEPDGS LDPQAVLDAI GPRTKLVAIT HCSNVLGTVV
181 DVKSICAGAR AKGVPVLVDG SQGAVHMPVD VQDLGCDFYA ITGHKLYGPS GSGAIYARAE
241 RLAEMRPFMG GGDMIKEVTK DTVIYNDPPM KFEAGTPGIV QTIGMGVALD YMMALGMENI
301 AAHEAGLRDY AASRFAGLNW LNVQGHAPGK AAIFSFTLQG AAHAHDISTI LDKKGVAVRA
361 GHHCAGPLMD HLGVTATCRA SFGLYNTRAE VDTLIEALEL AHELFA
SEQDB ID: 3101377DAR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSAELRSLA ALTVTDPASA ARLILTRNPG REALWLALAL SVALTSLLHG LSNMAFGSVA
61 MPGIPQSVVG YGALMGGGLI LTIAAIHRIG RLLGGQGSFW DLMAVMVWIQ LVLVVVQAAT
121 LLLALTVPLL SALLALAANL VALYVTLHFI DQAHRLNSLM RAAGVLILSV LAIALGVLVL
181 LSLVGGPIPG ATPYV
SEQDB ID: 3101377DAT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVTSDIAAS YRGPARVMRH LLDMGQREDR ALAFVMAFCV IAFVAQLPAL ARRAHLEQAD
61 LNMLMGGALL GSVFLLPLLF YAIALLSHWV ARMLGGQGSA YGARLALFWS LLASTPLVLL
121 NGLVAGFIGP GPALSAVGLI WVAVFAWFWL TNLREAQRPA P
SEQDB ID: 3101377DAU
Reference:
3101377
Name: Fe-S assembly protein, Isotype: SufD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGVPAQKQTA TEALLATLTL PTAGCTQSAR EAALARLREM GVPGRRDEYW KYTRPDSLIS
61 PEAPRAATFH TDEPMMFDAI DRLKIVFVDG VFDAEASDAL ELDGVRIERI EDICCKDIHW
121 AKDLYGVLEA RGQTPVPRPL AALNTAFAAD GIAIHVTGKP SKPISLIYKH ASESSDALLH
181 HVIRVESGAE VTILENGPAA SRFNKCMEID IADGGTLHHV RAQGRDHERR AVTHMFTRLG
241 AASVYKSFTL TVNGVLTRNE QVVELTGDEG VAHVAGACVG DGDFLHDDTV FVTHDAVNCE
301 SRQVFKKVLR NGATGVFQGK ILVQPGAQKT DGYQISQSLL LDDDSQFLAK PELEIYADDV
361 ACSHGSTSGA IDDTALFYLR SRGVPEKAAT DLLTLAFLAE AVEEIEDEAL VADIVSRLEG
421 WLARRA
SEQDB ID: 3101377DAV
Reference:
3101377
Name: Fe-S assembly ATPase, Isotype: SufC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sufC
Sequence:
1 MLEIKNLHVK LEEEDKQILK GVDLTVEAGK VHAIMGPNGS GKSTLSYVLS GRDGYEVTEG
61 GATLSGADLL EMEPEERAAA GLFLAFQYPV EIPGVGNMTF LRTAVNAQRK ARGEEELSAA
121 DFLKEVRAKA KALKIDADML KRPVNVGFSG GEKKRNEILQ MAMLEPKMCI LDETDSGLDV
181 DAMKLVAEGV NALRDAGRGF LVITHYQRLL DHIKPDVVHI MADGRIVKSG GPELALEVEN
241 NGYADILAEV N
SEQDB ID: 3101377DAW
Reference:
3101377
Name: exoV domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRALPTDPIR LYWWKGVPNF GDALSALVVA HVSGRAVRHA GPKGCEMLAI GSLIQVMRRN
61 YGEPAPDGRR PVIWGAGLLH PVGSTGFLDN VDVALLRGPL SADLLGLRMR GFGDPGLLVS
121 DLLGDLPARN DRIALVPHHS MLEDPALAAL LASEPALKLI DVAGDALATC REIASCRHVI
181 SASLHGLIVA DACGVPSTWL MPGGQQHLKY YDYAASVGRP LDMPLTLAEV PAHLRGLKDD
241 DRLDWAEGIA RARSDLLTAF PAHMRAQTPA SAAVAEPK
SEQDB ID: 3101377DAX
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSADGSEQTN QPSRAAQMLA NRHGFLAAAI APARPLRIAD VGANPINVPD YDGLLRLGGC
61 EVWGFEPDQA SYDALMADPR PGTHYLQQAV GPTGPGRFHP HPQSGLGSLY PIRKRSVTFL
121 GKPGWHREGI EPIEMELVAL DDLDEGALPR PDLLKIDIQG GELDVIRTGR DKLSEAVCVI
181 PEVRFYRIYE DEPLFGPLDV ELHDQGFRFH TFQFTKSMQI MNSQRARLAG KAFRNQMMDG
241 DAIYIRDPET VEDWRDEQLR QLAVASACVF ASFDLTVFCL DELVRRGLAA PEVPGQFVDT
301 LPTWMLKGS
SEQDB ID: 3101377DAY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVTTTPNVE GRRITAYKGI VVGEAIMGAN VVRDVFASIT DIVGGRSGAY ESKLQDARET
61 ALSELEGRAV ALGANAVVGV DLDYEVVGQS MLMVSASGTA VVLD
SEQDB ID: 3101377DB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQLVALILC LAAAAASADP VDQVLDVHVL PGFARLADET ALLANAADAG CEERDPDLRA
61 ALNGALRAWA GVSHLRFGPT EAENRAFALA FWPDSRGMTP KALAGLIAAE DPVVQEAEGF
121 AQVSVAARGL YALEFLLYDE GQAGNDPYHC ALIRAIVRDS AGLARAMAAD WHDRYAALMR
181 APGPDSPYRS RDEAMQELFK ALGTGLQITA DLRLGRPLGS FARPRPNRAE AWRAGLSLLL
241 VIEALHSQRQ LALLLAEEDA GLKARLTDAF DRALGDAAAL DDPALAGVAT PAGRFRVEAL
301 QQRVNEIRQV VAQELGPKLG VSAGFNALDG D
SEQDB ID: 3101377DBA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDDQSGDQMR PELTMPPAEA EALRMAYEEA EVILEYGSGG STVVAAELPG KHVTSVESDR
61 AWARMMKAWL AANPPAEGTE VNIVWTDIGP TGDWGHPVSD AKWRSYPDYP LAVWRTEGFR
121 HPDVVLVDGR FRVGCALATA FSITRPVTLL FDDYSQRRWQ HQVEEFLGAP LMIGRLAAFQ
181 VEPQPIPPGS LMQLIRTMTS P
SEQDB ID: 3101377DBB
Reference:
3101377
Name: Fe-S assembly protein, Isotype: SufB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sufB
Sequence:
1 MAALDQTQVK EGVDQETVDA VREAGTYKYG WETEIEMEYA PKGVNPDIVR LISDKNEEPE
61 WMTEWRLAAF ERWTGMSEPK WAMVSYPEID FQDQYYYARP KSMSEKPKSL DDVDPKLLAT
121 YEKLGIPLKE QMILAGVEGA ENAPAEGRKV AVDAVFDSVS VGTTFQAELK KAGVIFCSIS
181 EAIREHPELV KKYLGSVVPV SDNFYATLNS AVFSDGSFVY VPPGVRCPME LSTYFRINAE
241 NTGQFERTLI IADKGSYVSY LEGCTAPKRD VAQLHAAVVE IIIEEDAEVK YSTVQNWYPG
301 DENGKGGIYN FVTKRADCRG DRSKVMWTQV ETGSAVTWKY PSCILRGDDS QGEFYSIAIA
361 NNMQQADTGT KMIHLGKNTK SRIVSKGISA GRAQNTYRGL VSMHPKAKNS RNYTQCDSLL
421 IGDKCGAHTV PYIEVKNNSS RCEHEATTSK VDEDQLFYCR SRGMDEEEAV ALVVNGFCKD
481 VLQALPMEFA MEAQQLVAIS LEGSVG
SEQDB ID: 3101377DBC
Reference:
3101377
Name: Fe-S cluster assembly transcription factor, Isotype: IscR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLSTKGRYA MVALTDIALQ PADKLVTLGD ISERQDISLP YLEQLFVKLR RADLVASVRG
61 PGGGYRLARP ASDIRVVEIL AAVDETVNAM HKGAGASGAS SGSRAQSLTN RLWEGLSAHV
121 YVFLHQTRLS DVVKNDLAPC PAVPNLFSIV DD
SEQDB ID: 3101377DBD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEVIFPGPE GRLEGRYHPQ KEKDAPIAIV LHPHPQFGGT MNNKVVYNLH YAFYNLGFTV
61 LRFNFRGVGR SQGEYDQGIG ELSDAASALD YLQSMNNNSK HCWVAGFSFG AWIGMQLLMR
121 RPEITGFISV APPANMYDFS FLAPCPSSGL IINGTSDRVA PPADTRSLVN KLHEQKGITI
181 THTEVEGADH FFQNQHMDTM ITSVTDYVKR RLTETSR
SEQDB ID: 3101377DBE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGTIETLAA KLAEDTLDAM DQTGNERLYM EIGSQLAASS QSLEEAFLTE VRVRLAERGA
61 RQVLARRLAE LKGKAKDSE
SEQDB ID: 3101377DBF
Reference:
3101377
Name: HD domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSARLDAQIA FLKQADRLKS VERANVLLDL SRPENSAEHS WHLALWALVL SPFAAPDVDV
61 DRAIRMLLLH DLVEIETGDH PIHEVTDWQA VERAERAAAR KLFGLLPPDQ AADFHTLWTE
121 FDADETADAR YAKMLDRCQP MFQVLCADTP RPDHVEVVRE NLSSGRAAYL AEAFPEAHAH
181 ARALLERHPP VTGGFGDRLE FLAEADRLKT VLRASRLMDD SRFENSAEHS WHIMLYAWVL
241 GEYAAAPVDI DRVLRMLLLH DLVEIDAGDN PIHGNVDHAA QEALEAAAAE RLFGLLPPDQ
301 GAGLRAIWQE FETAQSADAL FGKAVDRVQT PIANLENGGG SWVTYDVSLQ QLVARVGTPV
361 SRGAPGLWDW LFPQLSDCFT RLGLRL
SEQDB ID: 3101377DBG
Reference:
3101377
Name: Gln amidotransferase class II domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRWAAYHGT PIFLEDVISR PGHSLIAQSA HAEECKTATN GDGFGVAWYD ARPEPGLYRD
61 VYPAWSDPNL RAVAHHVRSG LFLSHVRAST GSCISRNNCH PFAARRWCFM HNGQVGGFEA
121 FRKQADMAIA DEFYTYRKGS TDSEVLFLLA LSEGLEHDPH GALARAIARL EGLSRAHGTT
181 PHMRLSAAFS DGQTLYAARY SSDHIAPSVY YRYSHARQGW AVVSEPLETD EGDWTELRPG
241 RMLTIGAEGA AERDFAPADL GRAA
SEQDB ID: 3101377DBH
Reference:
3101377
Name: multidrug resistance efflux protein, Isotype: SMR family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLHYIYLIL AVAAETVGTT ALQASQQFTR LVPSLIVVGG YGIAFFLLSL TLRHMPVGIV
61 YAIWSGLGIV FIAFIGLVVF GQRLDLPAIL GIAMILAGIL VIHLFSGASP H
SEQDB ID: 3101377DBJ
Reference:
3101377
Name: GTP-binding protein, Isotype: TypA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: typA
Sequence:
1 MDLRNIAIIA HVDHGKTTLV DELLKQSGAF RENQAVAERA MDSNDLERER GITILAKATS
61 VEWRGTRVNI VDTPGHADFG GEVERILSMV DGVVLLVDAA EGPMPQTKFV TSKALALGLR
121 PIVVLNKVDK PDAEPDRALD ECFDLFANLG ANDEQLDFPH LYASGRSGWA DTDLDGPRKD
181 LTALFELVVR HVPAPAQIAR KDEPFRMLAT TLGSDPFIGR ILTGRVESGT LKAGETLKAL
241 SRDGTQIESF RASKILAFRG LGQQPIDVAE AGDIVTIAGM SKATVADSLV NPQVSEALPA
301 QPIDPPTISV TFGINDSPLA GRDGKKVQSR VIRDRLMKEA ESNVAIRVTD TPGGEAFEVA
361 GRGELQMGVL IENMRREGFE LSISRPQVLF REEDGQRLEP VEEVTIDVDD EYTGAVIEKV
421 TGPRRGELVE MKPAGAGKTR IIAHVPSRGL IGYHGEFLTD TRGTGVLNRV FHGWTPHKGA
481 IPGRRAGVLI SMENGQSVAY ALWNLEERGR MFIGPQTDVY EGMIIGEHSR DNDLEVNPLK
541 GKKLTNVRAS GTDDAVRLTP HIQFSLEEAI AYIDDDELVE VTPNTIRLRK RYLDPHERKR
601 MARAAS
SEQDB ID: 3101377DBK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGALWIAHVT VTDAEAYGKY AELAGPAIAK HGGTFIARGG RFVQLEGKER PRNVVARFPS
61 VEAAVECYNS PEYQAALDHA RGASERELMV VETSE
SEQDB ID: 3101377DBL
Reference:
3101377
Name: Ala-tRNA synthetase, Class: EC6.1.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: alaS
Sequence:
1 MPSLNDIRST FLNYFAKQGH TIVPSSPLVP RNDPTLMFTN SGMVQFKNCF TGVDKRDYVR
61 ATTAQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKSEAIPFA WELITRDFDI
121 PKDRLYTTVY HTDDEAFEIW KKVGVPESRI IRIATSDNFW QMGPTGPCGP CTEIFYDHGD
181 HIWGGPPGSP EEDGDRFIEI WNIVFMQNEK FEDGSMVDLD MQSIDTGMGL ERIGALLQGS
241 HDNYDTDLFK ALIEASADAT SVDPYGDQNV HHRVIADHLR STSFLIADGV MPSNDGRGYV
301 LRRIMRRAMR HAHLLGAKDP VMHRLVRTLV GQMGAAYPEL GRAQALIEET LLLEETRFKQ
361 TLDRGLKLLD DELTALPEEA PLPGEAAFKL YDTYGFPLDL TQDALREKGR KVDTDGFDAA
421 MAEQKAKARA AWAGSGESTD NAIWFDVLDV AGATDFLGYD TEKAEGQALA LVVDGALSDR
481 IAEGGSGWVV TNQTPFYGES GGQVGDTGVI RRLENRDHVA LVEDSRKFAD GKVYAHKVTM
541 ERGALAKGDA VELEVDHARR SAIRANHSAT HLLHEALREA LGDHVAQRGS LNAADRLRFD
601 FSHAKALTEA ELAQVGAEVN RFIRQNSRVE TRIMTPDDAR AIGAQALFGE KYGDEVRVVS
661 MGRAETGKGA DGKTWSIELC GGTHVAQTGD IGMFVLLGDS ASSAGVRRIE ALTGQAAFDH
721 LSQEGARLSQ VTAMLKAQPA EVAERVRALM DERKALQNEV AQLRRDLAMA GGAGQGGGAE
781 THEVGGVPFL AQVLSGVSGK DLPALIDEHK SRMGSGAVLL IADAGGKAAV AAGVTEDLTA
841 RVSAVDLVKA AVAALGGKGG GGRPDMAQGG GQDAGKADAA IKAAEQVLGG
SEQDB ID: 3101377DBM
Reference:
3101377
Name: RecA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recA
Sequence:
1 MSSKQSADKQ KALDSALAQI ERQFGKGSIM RLGGENAIQE IEASSTGSLG LDIALGIGGL
61 PMGRIVEIYG PESSGKTTLT LHCIAEQQKR GGVCAFVDAE HALDPQYARK LGVDLDELLI
121 SQPDTGEQAL EITDTLVRSG AVNMVVVDSV AALTPKSELE GDMGDSSVGV HARLMSQAMR
181 KLTGSISRSK CMVIFINQIR MKIGVMFGSP ETTTGGNALK FYSSVRLDIR RIGAIKDRDE
241 VVGNATRVKV VKNKVAPPFK QVEFDIMYGE GISKTGELLD LGVKAGVVDK SGSWFSYGDE
301 RIGQGRENAK TFLRENQSIA LAIEDKIRAA HGLEFDMSDD GEDILEA
SEQDB ID: 3101377DBN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVFFKERLV LLSVPKTGTT AYQTALRARA DIVVSDPPEL KHAPIYRYDR FFRPIFEKMF
61 GVEMEIMAVV REPVDWLGSW YRYRRRPFMQ GKPNATHGLS FDDFVTAYMQ GKRPGFANVG
121 SQARFLTPRP NGCTVSHLFK YENQPGIRAF LQDRLQTEIA PPRENVSPDL PLDLSPEIAE
181 RLRRKCAEEF DLHASAT
SEQDB ID: 3101377DBP
Reference:
3101377
Name: sensory box sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEFTASIPS VPTTRRSTRA RVVAMLLLAL AAFAAAALWD LPGFVQKALI AAGGSSVLVT
61 GWLLFQGRSA IGVETQMRRL LAGFIEKDAT PSFVTDEEGA IQARNAAASI RFSGTSDETL
121 AATLRSIFGN PSAVLYRLQC RARIEGNARE DVVTRRGHIR LSVHVLGEVG FLWRVEDITD
181 RTAASSRADS LPLPMLTIGR SGAVLFMNEA ARGFIGSRIK SLDRLFLQLP YRAGEINHVS
241 TGEGSAPAIV VEISNSPGRQ ELFLIPVKGE MGPGKAPDFA TLPVAMMRLT ATGKVLEVNR
301 LAQDLLGGPI EPDTTLDQLM LGLGRPIPDW LRQTAEEAGA PRSEFLRLSG RDSEMFVQVT
361 LSPINEAGQS GLIAVLNDAT ELKTLEAQFV QSQKMQAVGQ LAGGVAHDFN NLLTAISGHC
421 DLLLLRHDQG DPDYGDLVQI NQNANRAAAL VSQLLAFSRK QTLRPEVLDL RDTLADLIHL
481 LNRLVGEKVT LTLSHDPVLK SVRADKRQLE QVLMNLVVNA RDAMPQGGEI RIETEVMTLD
541 EPLERDRATL PIGEYVTVKV RDEGTGIEPD KLQKIFEPFY TTKRTGEGTG LGLSTVYGIV
601 KQTGGFIFVD SVLGKGSEFT LYLPAYQAAA GEERPVPARA AKPVATHGAG VVLLVEDEAP
661 VRAFASRALR LRGYTVIEAD SAEEALRLLE DPELSVDVFV TDVVMPGLDG PTWVRKALQE
721 RPDVRVVFVS GYSEGAFGET DSALPNSVFL PKPFSLTQLT ETVHQQLH
SEQDB ID: 3101377DBQ
Reference:
3101377
Name: NOL1/NOP2/sun family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPAARLQSA IEVLDEILAG KPAEQALTGW ARRSRFAGSK DRAALRDHVF DALRARRSFA
61 ARGGAETGRG LILGLCRAQG LAVADLFTGI GHAPAPLTPE EQAGGRDPAP GAEAADIPDW
121 LWPRFEASLG ARAEAAGQVM QSRAPVHLRV NTARTDRASA IAALAGEGIV AQPHPACDTA
181 LEVTEGARGI ARSAAYLDGL VELQDAASQA IVAALPLAPG MRVLDYCAGG GGKTLALAAV
241 PGIEVFAHDA APQRMRDLPA RAARAGAQVR LLDTAEAARM APFDLVLADA PCSGSGSWRR
301 APAGKWELSE EKFAALLAVQ REILHCAAAL TAPGGVLAYA TCSMLSEEND GAVQAFLDTG
361 GWKLDDCHRW DVLSGTDGFF LALLTRTHSE F
SEQDB ID: 3101377DBR
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQVDSFQSG PWRVDCLVDG GMTFGTDVFA NVAPARQAEL LGAAGLSAAV TEFNAYLMRH
61 DDGRIWLVDT GCGSICGPEG GQLPARLAQV GLAPGDISRV ILTHLHADHC GGLLGQAAAL
121 FDDAEILLHP DEVAHWRGTE APGAQVLNTC ADRLSLVRGD DDLGADVRVW ALPGHTPGHF
181 GLRIGQDLVL AGDILHSEAL QLPDPRHATQ FDVDPALALA SRRAALDEIA GRNLVWSGSH
241 LIGAKFARLR RAGDGFAKLD I
SEQDB ID: 3101377DBT
Reference:
3101377
Name: inosine 5'-monophosphate dehydrogenase, Class: EC1.1.1.205
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: guaB
Sequence:
1 MQIREALTFD DVLLVPAASS VLPSTADTRT RVTREIKLNI PLLSSAMDTV TEARMAIAMA
61 QAGGMGVIHK NLSVDEQARE VRRVKRFESG IVYNPVTLRP DQTIADAKAL VERYNFTGFP
121 VTDTRGHIVG IVTNRDMRFA TSDDMPVSAV MTTNDLAMLA EPADLDEAKS LMRARRIEKL
181 LVHDGQGRLT GLLTLKDTEQ AVLNPTACKD HLGRLRVAAA SSVGDSGFAR SEALIDAGVD
241 IVVVDTAHGH SAGVIDAVRR IKQQSNMVQV IAGNVATAEA TKALIDAGAD AIKVGIGPGS
301 ICTTRMVAGV GVPQLTAIMD CAQAAGDVPV IADGGIKFSG DFAKAIAAGA SCAMVGSMIA
361 GTDESPGEVI LYQGRSFKSY RGMGSLGAMA RGSADRYFQK DAASDKLVPE GIEGQVPYKG
421 SASAVIHQLV GGLRAAMGYT GCATVGEMRQ NCQFVKITGA GLKESHVHDV QITRESPNYR
481 VG
SEQDB ID: 3101377DBU
Reference:
3101377
Name: CaiB/BaiF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGPLSGTLV LDLTHVLAGP FASMTLADLG ARVIKVERPG QGDDTRAFPP FKGGKSAYFA
61 TINHGKESIA LDLKAPEDRA IFERLLARAD ILLENYRPGV MERLGYGWEA LHARFPKLIY
121 GAVSGFGHTG PEAQRPAYDM VVQARGGVMS ITGERDREPV RVGASIGDIV AGMYLVQGVM
181 AALLQVERGG TGQKVDVAML DSQLALLEHA IAITSVTGEP PRPSGARHPS ITPFETFHAE
241 DGLFVIAAGN DGLFARLCDA LELPLAEDPR FATNPARCQN ARLLKRLIEA VTLDRPKAHW
301 IETLTRAGVP TGPIQNVAEV LQDPQIRARN MVVDVLGPDG APAYTAAGNP IKMSDLPDPT
361 TRAPAPDLDA DRAAILDWLD EGAAD
SEQDB ID: 3101377DBV
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSDPLVLFT PSGKRGHFPV GTPILTAARQ LGVDLDSVCG GRGICSKCQI TPSYGEFPKH
61 GVTVRDGALS EWNAVEQRYK DKRGLIDGRR LGCQATVQGD VVIDVPPESQ VHRQVVRKRA
121 EARKITMNPS TRLFYVEVEE PDMHKPTGDM ERLIAALAEQ WELTGVQTDL HILHQLQPAL
181 RKGGWKVTVA VHLGDASHPP KIMHIWPGYY DGTVYGLAVD LGSTTIAAHL CDLHSGEVVA
241 SSGIMNPQIR FGEDLMSRVS YSMMNKGGDL EMTRAVREGM NALFTQIATE AGIDKALIVD
301 AVFVCNPVMH HLFLGIDPFE LGQAPFALAT SDSLSLRAWE LELNIHPAAR VYILPCIAGH
361 VGADAAAVAL SEAPDKSEDL VLVVDVGTNA EILLGNKNKV LACSSPTGPA FEGAQISSGQ
421 RAAPGAIERV EIDPVTKEPR FRVIGSEIWS DQEGFGEAIA TTGITGICGS GIIEVVAEMR
481 MAGILDASGL IGSAEQTGSP RCIQDGRTNA YLLWDGSADG GPTITVTNPD VRAIQMAKAA
541 LYSGARLLMD KLNVDKVDRV VLAGAFGAHI SAKHAMVLGM IPDCPLDKVT SAGNAAGTGA
601 RIALLNTDAR TEIEATVRAI EKVETAVERR FQEHFVNASA IPNSVEPFPE LAKVLTLPDV
661 SFNTGGGDDG SGRRRRRRA
SEQDB ID: 3101377DBW
Reference:
3101377
Name: methyltransferase, Isotype: UbiE/COQ5 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETNHDQAE YWGKSASGMK WLTFEEQIAA SFAPVVDLLL ERAALKPGQR VLDIGCGLGD
61 VTLAAAQAVG PGGHVLGVDI SAPFLERAGL RASGMGNVGF ALADAQSEPF APAERDAVLS
121 RFGMMFFSDT VAAFANIARA LKPGGRMTFA AWGPLAGNPW FYLPHRAATD RLGQMPKVDR
181 NAPGPLAFHD IDRVTGLMAE AGLADIEAQA VDLNLTPPGG LEGAAALCTR LGPAARVLAH
241 FNGSEADEAA IRDAVSAALE PYVEGGEVLM PATINLFQAR RAGTA
SEQDB ID: 3101377DBX
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSIKFSAIL AISGLVAGCA QQPNQVAASY VSPSTYDGRS CANLLQERNE IVGRVNQLTS
61 EQKEAATTDA VLTGVALVVF WPAAIGLAAT KDNATALSAA KGNYDAITAK MTQKGCALPP
121 EPVAPSPVAT EEKKKRSWE
SEQDB ID: 3101377DBY
Reference:
3101377
Name: medium-chain fatty acid-CoA ligase, Class: EC6.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: alkK
Sequence:
1 MLGQMMYQPL LISSLIDHAA RYHGEAQIWS VSTEGGVEET NWAGIADNAR RLGSVLTDAG
61 LAPQSRVATL AWNNRRHLEI YYGVSGAGFV LHTINPRLFP EQLVYILNHA EDRILFFDAT
121 FLPLVEGIRP HLTTVERLVL MGPRDEAAAA RIEGLEFYDE FVATGDAGFD WPDLDERTAS
181 SLCYTSGTTG NPKGVLYSHR STVLHSFGSN TRDCIGFSAR DVVMPVVPMF HVNAWGTPYA
241 CAMSGSCMVL PGPDLHGEAL VGLIDRYRVT IALGVPTIWQ GLLATARAKG STLESLTRTV
301 IGGAACPPSM IAEFRDRYGV DTVHAWGMSE MSPLGTTNQP LAKHGALPIE AQHKLRENQG
361 RPPYGVELKI VDDDGNTLPN DGQTQGDLMV RGHWVLDSYF QLQDQPILSD GWFATGDVAT
421 LDRDGYMTIR DRSKDIIKSG GEWISSVELE NIAVAHPKLA TAAVIGVPHP KWDERPLLVA
481 VKAEGETPDE AELLAFFDGK IAKWQVPDRV VFVEALPLNA TGKVLKRTLR EQFRDVLTG
SEQDB ID: 3101377DC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTRRGFLAG LAAAGLTPRA GWADAGAPAF LSAGRVADGA YNLYGLDRRG RPLFHLPIPD
61 RGHAAAAHPQ RAEAVAFARR PGRFALVLNC VSGAEIARLS APEGRHFYGH GAFDAEGRVL
121 FTTENDYEAG QGRIGLWDAG AGYRRIGEVA SGGVGPHDIR LMPDGQTLVV ANGGVETHPD
181 TGRVKLNLPV MQPNLSYLSL AGEVLEVVRM PPEHRMNSIR HLDLRADGLV AFAMQWQGEG
241 TELRPVLGLH RRGTAPVAVT GNEAEMRAMN GYGGSVIFYD QGRRVAVSSP RGGIVQLSDV
301 AAGRIIGGVA ITDVCGLGVT GGGLVASSGS GVFTRVGGKE ASRSEIAWDN HLVAVNRA
SEQDB ID: 3101377DCA
Reference:
3101377
Name: glucose 6-phosphate isomerase, Class: EC5.3.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pgi
Sequence:
1 MFQDLHALHT RTSGRRILDL FAADLRRAER FSADLGEMRL DYSKTQIDDA IRAGLIALCD
61 RAQLADKREA MFAGAPINET EGRAVLHTAL RNLDGGPVHV DGAEVMADVR LTLARMRRFA
121 EALRSGALPG AGGAITDVVN IGIGGSDLGP AMAVLALAPY HDGPRCHFVS NVDGAHIADT
181 LRGLDPARTL VIVASKTFTT IETMTNARTA RDWMQRGGGD PERQFAAVST ATDRTAAFGI
241 PGDRVFGFAD WVGGRYSLWG PIGLSLMIAI GPDDFDAFLR GAQEMDRHFQ SAPWEKNLPV
301 MLALTGIWHH QICGHPSRAV LPYDQRLARL PAYLQQLEME SNGKSVAMDG TALDQAAGPI
361 VWGEPGTNGQ HAFYQLIHQG KQVVPCEFMV AARGHEPDLA HHHRLLIANC LAQSEALMRG
421 RPLDEARAIA AARGVAGDEL ERQARHRVFA GNRPSTTLIY PRLTPAMLGR IIALYEHRVF
481 VEGVILGINS FDQWGVELGK ELATSLGPVV DGTESAAAKD GSTAALVDYV LAHRDTDLT
SEQDB ID: 3101377DCB
Reference:
3101377
Name: 6-phosphogluconolactonase, Class: EC3.1.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pgl
Sequence:
1 MNIQDYPDRD MLAIDLANHL AGELEATLFT HDSATLAVAG GTTPGPVFDV LCAADLDWHR
61 VMVLPTDERC VPQDHSRANA RLIAERLLVN RAASARYLPL YLPGAEPEDC LAEVEALLTP
121 ALPLSVLVLG MGEDMHTASL FAGMPGLAAA LDADAPALAV ARPETQPENR ITLTAPVLNG
181 ALSKHLIIYG AAKRKALERA MSMHPEEAPI AAVLDGITVH WAE
SEQDB ID: 3101377DCC
Reference:
3101377
Name: glucose 6-phosphate 1-dehydrogenase, Class: EC1.1.1.49
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: zwf-1
Sequence:
1 MVSRIIPVEP FDLVVFGGTG DLARSKILPA LFRRSVAGQV PEGGRIIGVA RQDMGVEAYH
61 ALIAQSLREL LPDLAQVPGA LDRFLKQLDY VALDATQPEG WEQLASMLGQ GVRAFYFSVG
121 PGLFGALAER LRQHGLVSDD TRIVVEKPFG HDLASARALN ATLAAQFHER QIYRIDHYLG
181 KETVQNLMAV RFGNMLFEPL WNSQYVDHIQ ITVAEAVGVG GRADYYDRAG AMRDMMQNHL
241 MQLLCLIAME PPAKFDPDAV RDEKLKVIRA LDAVKPHHIV RGQYAVPVGG VGQGYRDEVG
301 DPRSITESYI ALRAHISNWR WAGTPFYLRT GKRLVARSSV INVMFKDAPH SIFGEEAGRH
361 ANVLSIRLQP NEGITLKVTI KEPGPGGMRL VDVPLDMSFA KALGPENQSP PDAYERLIMD
421 VIRGNQTLFM RGDEVEAAWA WTDPIIAGWQ ARGDVPKPYD CGSTGPGDAE LLMRRDGRRW
481 QGINP
SEQDB ID: 3101377DCD
Reference:
3101377
Name: radical SAM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSRGITSLS NHLIPLSFPA RLRIDQADKQ AQAGLMKDHA QHTANIGKFQ DSFVTADGQA
61 RASVPLSRPE TLWFNTGTLC NIECANCYIL SSPKNDALVY LSADEVSAYL DQIAARGWPV
121 HEIGFTGGEP FMNPQIIAMS RTALERGFEV LILTNAMRPM MRKTMRLGVA ALVRDFGDRL
181 TLRVSVDHHS AACHDAERGA GSFARTLAGM VWLRDCGARM TVAGRTVWGE SEAEARAGYA
241 ALYAEYGFAI DAFDPGQTVL FPEMDERVEV PEITTACWDI LGKSPETVMC ASSRMVVKRK
301 GAAHPVVLAC TLLPYAPEFE LGQTLAEAER PVQLNHPHCA KFCVLGGASC SA
SEQDB ID: 3101377DCE
Reference:
3101377
Name: usg gene
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERSETELML KGYGLTTAEL FYHMPDHIHV LNSFVWQEYD LAPDHPRLFG FIEFWQREID
61 GPLHSVRFTH RKMISPGEWR NVVGEFRLH
SEQDB ID: 3101377DCF
Reference:
3101377
Name: DNA gyrase, Subunit: A, Class: EC5.99.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gyrA
Sequence:
1 MGPTVSIESE MRTSYLDYAM SVIVSRAIPD LRDGLKPVHR RILYAMHETG NGHDKPYRKS
61 ARPVGDVMGK YHPHGDSAIY DALVRMAQDF SMSLPLLDGQ GNFGSMDGDN PAAMRYTEVR
121 MDKPAAFLLS DIDKETVDFQ DNYDGKDREP TVLPARFPNM LVNGAGGIAV GMATNIPPHN
181 LGEVVDATLA LIDDPDLTSE QLIDYVPGPD FPTGGVMLGR SGARKAYLEG RGSVIIRAKT
241 RVEELRKDRY AIIVDEIPYQ VNKATMIEKI AEAVREKRIE GVAHVQDESD RNGVRVVVEL
301 KRDATPEVVL NQLYRFSPMQ TSFGCNMLAL NGGRPEQLTL RRFLTCFIDF REEVVARRTA
361 HDLRKARERS HVLCGLAVAV SNVDEVVATI RSSADAADAR EKLMTRRWPA ADIAAYLRLI
421 DDPLSKMNED GTYNLTEVQA RAILDLRLQR LTQLGVKEVT DELEVLAGKI KEYLEILGSR
481 ERIMGIIADE LREVREQFAV PRRTEIVDWS GDMEDEDLIE REDMVVTVTS GGYIKRTPLA
541 DFRAQKRGGK GLSGMQTKEE DVVTTLFVAN THTQLLFFTT DGMVYKLKTW RLPQSGRTGK
601 GKAIVNILPI PTGVSIAAIM PVDVPDEEWD ALQIVFATSA GDVRRNALSD FTNVKRNGKI
661 AMKLPEDVEL VNARICSEED DVMLITNSGR AIRFPTTDVR VFKGRDSTGV RGIRLQNGDR
721 VVSMSVIRHF EAEPWERAEF IKRFRTILGA EMEDDAAETD EDAVEGEGVL TDERYQEMQD
781 AQDLILTITV TGLGKLSSSH DYPVRGRGGQ GVKAISAGPR GGTLAASFPV LMDDQIMLAT
841 SGGQSIRVPV EGISFRSRSA GGVRVFNTSK GEEVVSVARI AEQGDEEGEE E
SEQDB ID: 3101377DCG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLYHCAIDL KHEAKALAFA AALDHWMQYL KARGVVRDWR LLRRKLNLAA DSCRDFLLEI
61 EFDDMTQLDR AFRVLGEHDE EVERLYGAVS ALIAHSDFGL YRPFPDPERA ERMALL
SEQDB ID: 3101377DCH
Reference:
3101377
Name: thermostable carboxypeptidase, Class: EC3.4.17.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAFEQLMAH ARETAALDQI AGRLGWDQET MMPRGAAPQR AEESAAIAGV LHARRTDPQV
61 GDWLAAAEAP DEAGAAQLRE IRRSFERTAR VPADLARALA RTTARAQGVW AEARADEDVA
121 AFLPDLKEVV ALRREEGQAL AQGGDLYDAL LEEYEPATSA AQIAETFDTM RPRLVALRSA
181 VLDRPVPQRL EGQFDESAQM KLSRHLARSF GYDMAHGRVD KAVHPFSSGS GLDVRITTRT
241 NPDDPFNCFY STIHEVGHAA YEQNIDRAYL LTPLGRGVSM GVHESQSRIY ENQLGRSRAF
301 TGWLFGQMRA AFGDFGIADE DAFYATVNTV HRGYIRTEAD EVQYNLHIML RFDLERALMA
361 GDLAVDDLEA AWNDRFAADF GYQVDKPSNG CLQDVHWSVG LFGYFPTYAL GNVYAGCLYQ
421 ALRQAVPGLE ADLAQGDTAA ATGWLADQVQ RHGGLYAPRE VIARASGIEP GPEPLLDYLE
481 AKFGALYDL
SEQDB ID: 3101377DCJ
Reference:
3101377
Name: cytochrome c oxidase assembly protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDRGRGGAR GAIRAWLAVL FALVVAMIVV GGLTRLTDSG LSITEWRPVT GAIPPLSEAD
61 WQAEFDKYKQ IDQWRLQNQW MELADFKSIY WWEWGHRQLG RVIGLVWALG FFGFLLARKI
121 PAGWTGRLIL PGVLGGVQGA VGAWMVASGI TQGEGMTSVA SYRLATHLGL AFVILGLLAW
181 SILQLGRSER DLMQARRTKE ARLFGLATGW LHLAFLQILI GALVAGLDAG RNYVDWPLMA
241 GQVIPPDPLE LSPLWRNFFE NPGLVQFIHR IVGYLLLAYG VMVWLRGRRS AHAQTRFAFN
301 AGFAALSLQV VLGIVTVLYA APWQIAILHQ LLAVGVFVLI LRARFLCAYP IATSIRG
SEQDB ID: 3101377DCK
Reference:
3101377
Name: RNA methyltransferase, Isotype: TrmH-family group 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSDKAQPAI VLVRPQMGEN IGAAARAMWN FGLDRMRIVA PRDGWPNSRA VAMSSGAGRL
61 LDEAQLYDDL PGALGDCTYV FATTARPREM TKPVYSPERA MQLAAEKLAA GEKVAVLFGP
121 ERAGLENDDI ARANAIITVP VNPDYASLNL GQCVLLVAYE WMRQTGDVVH LSDAPGPKGE
181 WATGLEIEKL AEHYEQRLDE AGFFFPPEKA EGMQQNLRNL WSRMRLTRAD VQMLHGIMRQ
241 MVRWKERG
SEQDB ID: 3101377DCL
Reference:
3101377
Name: thiamine phosphate pyrophosphorylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 METPEQPQLY LITPPSIDLD LFPDQLARVL DGAEIACIRL ALASRDEDLL SRAADACREV
61 AHARDVALVI ADHVLLAQRL GLDGVHLSDA ARSVRAARKE LGADAIVGSF CGTSRHDGMS
121 AGEAGADYVA FGPIGAHGLD DGSVAERDLF EWWSAVIEVP VVAEGALTAD LVRSFAPITD
181 FFGVGDEIWS AEDPLAALKG LISAMT
SEQDB ID: 3101377DCM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQRSGTRMR NMGLAFLAVL FRLALVALLS SPLTGVAGAH EVTPTVADLR VENETVILDL
61 RLNVEAFLAG IDLDGLGDTD ESDGSDSYDR LRALGAAELE PKVRDFAVAW KEQLNLSAGG
121 VALELSYEGV RIPVVGNPDL PRASHLLLTA YLPPGAASLT LGCPRGAGAL VLRQQGVDDP
181 YTGYLQGGES SPPIPLAGGA ALGPLETFQA YIPVGFTHIL PKGLDHILFV LGLFFLSPRL
241 RPLFWQISAF TLAHTLTLAL GATGTVRVDP AIVEPLIAAS ITFVALENIL VRRLHAWRPV
301 LVFGFGLLHG LGFAGVLEEF GLPAGQFLPA LLGFNIGVEL GQLAVIAAAF LSVGLWFRNR
361 RWYRGRIAIP ASMLIAMIGA YWVVERTLLT
SEQDB ID: 3101377DCN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSAAPGLSH EFWIEPNEYQ VETGAELVAD LRVGERFEGA SQVFFPDRAP RSEIRVGDEI
61 RPYTGRMGDI PAIRLVADTP GLWVLVHETS PSTVKYKEWQ KFADFAAHKD IPDIEAWHIA
121 RGLPRQDFFE TYTRHVKALV GVGAAAGGDG ETGMETEFIA LTNPYTDDLS GGMRVRLLYQ
181 GKPRPDAQVE IFDRAPDGTV SVHLARTDTV GIASVPVAPG HDYLLDAVVL RPAPEAERAV
241 WQSLWAGLSF AVPIR
SEQDB ID: 3101377DCP
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRFRQHDPG AKTLSGKFII HHIPVCPFSQ RIEILLALRS LSDAVEFRVV DITRPRDPEL
61 LAKTRGTTAL PVLETPDGRI IKESLVILRY LDEVLPGAPL RRIDPAEHAI ESMLIAKEGA
121 FVTAGYLYVM NQDRSQREAH LDRLLGLYRG LDDFLVEHNP KGTWLFDGFG LAEAVYTPLF
181 KRFWFLDYYE DFALPDDPAY DRVRVWRAAC IAHPATDQVS EEEIVKLYYD YALGAGNGAL
241 VDGRTVSSFA FEPDWRSRPW PPRDKYDGTA SDAALGLLSV
SEQDB ID: 3101377DCQ
Reference:
3101377
Name: kinase, Isotype: pfkB family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTSDILCI GSVLWDVIGR SASHMRQGSD VPGRITRLPG GVAMNIAMTL ARFGMRPTLL
61 TAIGRDAEGD ELIRACTQMG MCTDHIYRSE DLPTDRYMAV EGANGLIAAI ADAHSLEAAG
121 AKILRPMLDG PLGSAAAPHA GPVALDGNLT LSLLEEIAHS PAFALADLRV APASPGKAER
181 LLPFVRQGRA TLYVNLEEAG LLCQTEFTDS ASAAQALLKR GAQRVLVTDG GRSASEGDAD
241 RLITQTPPAV LVTRVTGAGD TFMAAHIAAE AQGADRDQAL SRALHAAATY VSGETPL
SEQDB ID: 3101377DCR
Reference:
3101377
Name: indigoidine synthase A family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDLHLSAEV HAARVAGTPI VALESTIITH GMPYPQNVET ARAVEQDIRD AGAVPATIAV
61 IEGRLHVGLD PDQLDALGQA QGVAKLSRAD MAACIATGGT GATTVAATMI AARFAGIEVF
121 ATGGIGGVHK GAEQSFDISA DLHELAETPV TVVAAGAKAI LDLPKTLEVL ETLGVPVIAY
181 GQDSFPAFWS ATSDLPAPLR MDDSASIARA HAARRALGLP GGQLVANPIP ADAQIAAEDL
241 APVIAQAQAQ ADAQGIAGKA VTPFLLQAIF EATGGRSLTA NIALVRNNAR LAAKIARDLI
301 ALGG
SEQDB ID: 3101377DCT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTPFDEEPP HVKPRRFAGL RASFLTGIVV IAPVGLTIWL FWSVVGWVDS FVLPLVPHQF
61 RPEQYIGINL RGVGVIFLLV FTIVVGWIAK GIIGRSLIQY AEGVVDRMPV VRSVYSGIKQ
121 ISETVFAQTE RSFEQACLIQ YPRRGIWAIG FVSTTAKGEV ADKAETGGRL MSVFVPTTPN
181 PTSGFLLYFP EEDVIILDMT VEDAAKLVIS AGLVYPNDKQ KGDE
SEQDB ID: 3101377DCU
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTIRRACPA DAAPLAALSI EIWLATYVKH GVRADYADYV LTTFTPTAME ALIAAPASTV
61 LVADCAEGIG GYLHLRHDSP APAGNAQVEI DKLYVQPRHQ AAGLGRALLQ AGLAGLPPGT
121 PAWLMVSSEN DRALRFYRGR GFAHVGDTHF RLNENAYLNH VFQIKAGA
SEQDB ID: 3101377DCV
Reference:
3101377
Name: phospholipase, Isotype: patatin-like family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVVRRINLAL QGGGAHGAFT WGVLDRLLDE PDVEVAAITG TSAGALNGAA FKAGMVAGGR
61 AGARAALDRV WRRMGAVTDD RISGWLGAGD PAHLARMLEY SAPFALAETW SRLVSPYAYG
121 PFYGNPLRPV VEALDFANVC AHQGPKLFIC ATRVRTGKIR VFAEEEITTD AILASACLPT
181 MFQAIEIDDP ETGRREAYWD GGYTGNPALF PLFNRDLPDD VVIVNINPLE RDALPVTPQQ
241 IQNRINEISF NSSLLRELRA IRFVQRLLED GTLERGRMSR VLVHMIADDA LMNSLSVATK
301 VVPLPQILDR LKQAGRAAAD SFLDAHKTDL GQRSTVDMEA MFG
SEQDB ID: 3101377DCW
Reference:
3101377
Name: D-beta-hydroxybutyrate dehydrogenase, Class: EC1.1.1.30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bdh-1
Sequence:
1 MSLNGKTAIV TGSNSGIGLG IARELARAGA DVVLNSFTDR DEDHALAAAL AAEFGVSARY
61 IKADMSQGAE CRALIAQAGR CDILINNAGI QHVAPIDTFP QEKWDAIIAI NMNSAFHTMA
121 AALPMMRAAG WGRIVNIASA HGLTASPFKA AYVAAKHGVV GMTKTVALET AQDPITCNAI
181 CPGYVLTPLV EAQIPDTMEK YGMSREDVIK KVMLERQPSK EFATVEQLGG TAVFLCSDAA
241 AQITGTTISV DGGWTAL
SEQDB ID: 3101377DCX
Reference:
3101377
Name: ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPDYFRPFR PLTAGIALLL GASFADAESR HAIAMYGAPA LPPDFVSLPY ANPDAPKGGR
61 VVFGNTGGFD SLNPFAQKGT FPWQMPFWSY ESLMGRSWDE PFTLYGLLAE SVEVPPDRAW
121 VEFTLREEAR FSDGSPVTVE DVIWSYQTLG TEGHLRYRGF WSRIASIEAT GPRSLRITFA
181 DEDRELAMLA GLRPILQKAQ WEGRSLSEGN IHDIPIGTGP YVVSAYEPGR YVTFARNPDY
241 WGADLGFRRG TMNFDEMRID FFGDGTVLME AFKAGELSAI REFNAQKWDS AYDFPAAQRG
301 DVIKTEIAHG KPSGMTGFVI NTRRAPFDDW RLREALLLAF NFEFINDTVT GGVMPRITSY
361 FSGTDLAYRP GTASGREAEL LAPFAADLPP GTLEGYALPQ GDGTARNRTN LRRAAQFLEQ
421 AGFRIEQGQL LGPDGAPLAL RFLLRQGDSD MQTVLEIYTR ALERLGIAAQ IEKVDNAQYT
481 ARVAELDFDL TPFRRDLSLS PGNEQRLYWG SHSAGQPGTR NLMGAASPAI DAMIDRMLAA
541 TTEDELTAAT RALDRVLTAG RYVIPIWRFD VGRIAHIRQL RFPPNPPIYG DGPQYMPDVW
601 WYQD
SEQDB ID: 3101377DCY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTWTDLTQD WASAFARAKR RFPNLDDGDM PFLKLDRDRF EAYLAARHNL TLDEAREELR
61 DYLYVEALNR ELES
SEQDB ID: 3101377DD
Reference:
3101377
Name: rhodanese-like domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYTIAALYHF TRFADPADLK PALLDLCLAQ GVKGTLLLAK EGINGTIAGP RAGIDAVLAH
61 IRALPGCSDL EWKEATSDHP PFGKMKVRLK QEIVTMGQPD VDPRARVGHY VEPEDWNDLI
121 RSDDVVLIDT RNDYEVAIGT FEGAIDPMTE SFRDFPAWWE ANKERFHNKR VAMFCTGGIR
181 CEKSTNYLLG QGVEDVYHLK GGILRYLEEV PAENSTWQGE CFVFDNRVSV GHGLVEGPHE
241 LCHGCRRPIL PEDRNRPEYE HGVSCHLCID ETSEADKMRF RERQKQIALA RARGEDHLAT
301 H
SEQDB ID: 3101377DDA
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKRDPSTLI RIARENGAEA EAEPLDLGAR VRELRKARDW TLEQAASQAG LARSTLSKIE
61 NGQMSPTYDA LKKLAVGLQI SVPQLFTPPQ KGQVNGRMTV TKSGSGSGHA TATYEHELLA
121 DSLTKKQMLP YRARVRARAM EEFDGWVRHD GEEFLYVLTG VIRLYTEFYE PIEMRRGDSA
181 YYDASMGHNV VSVSDEDATI LWVTSLV
SEQDB ID: 3101377DDB
Reference:
3101377
Name: benzoate-CoA ligase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSIFDQGPP PPCPAPFNLA AHVMRHARRQ PDKVALSVLR PDGAEEWSYA RLEQAILGTA
61 TGLLQAGLVP GDIVLMRLGN TVEFPIAYLG AIAAGIVPVP TSSQLTEPET ARMIADLSPA
121 AILRAPDVAC APHPRQIGIE ALNAMHALPP ADYALGDPER LAYAVYTSGT SGKPRAVAHA
181 HRAIWARQMM VEGWYGLTPE DRLCHAGAFN WTYTLGTGLM DPWAIGATAL IPEPGTDIAA
241 LPGLLAAHDA TLFAAAPGVF RKMLQGAGKL DLPALRHALC AGEKLPRALH ESWTRATGTE
301 LYEAFGMSEC STFISSSPAH PARGEALGQP QVGRRIAILG LDGPVPQGQP GTIAVHRGDP
361 GLMLGYLNAP DEAAARMQGD WFLTGDQGAM AIDGQITYLG RDDDMMNAGG YRVSPVEVEA
421 ALIRFPGIEQ VGAAAVEVKP DTYIIAAFYT GPAELDAAAL STYVEANLAR YKQPRAFVHL
481 PALPTGGNGK LLRRALPAYF KAPQP
SEQDB ID: 3101377DDC
Reference:
3101377
Name: DSBA-like thioredoxin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTVKLDIL SDPICPWCYI GKTQLDKALA AIPDHPFVIE WHPFQLNPDM APEGMDRREY
61 LERKFGGKEG AVRAYAPVVE HAEKAGLAID FEAMQRTPNT LDAHRLIHWA GVEGKQTEAV
121 DALFAAYFTE GRDIGDAEVL ADIADSIGMD AAVVLKLLKS DADRDDIAKR DSHSREMGVS
181 SVPTFIVANQ HAVPGAQPPE LWEQVIREIM SQIETTSA
SEQDB ID: 3101377DDD
Reference:
3101377
Name: drug resistance transporter, Isotype: bcr/CflA-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADRMSKAEF IALIAMMFAT IAFSIDSMLP ALPEIGQELS PEAVNRAQLI LTSFVLGMGV
61 GTFFTGPLSD AFGRKPVIYG GAALYILASA VALFSSSLEL VLAARVAQGL GAAGPRVVAM
121 AVVRDLYAGR QMARIVSIAM LIFTLVPAVA PLLGAGVIAL VGWRGIFVSF ILFAGIVVLW
181 LGLRLPESLP VENRRPFRGP LLADAVCQMF AHPTVRLSIL VQTFCMGTLF TMLTMVQPVY
241 DVIHGRAESF PFWFALVALI SGSASLLNAA LVVRLGMRRM VTWSLGAQIV ITTGMIASGW
301 VELSPDVQFG LFVAWQTSVF FMAGTTLGNL NAIAMEPMGH IAGMAASVIG AVSTVLAAAI
361 AAPIGLLFDG SMAPLTTGIL IMCTLGFALM LHMGRIEERV IA
SEQDB ID: 3101377DDE
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMTDYGYDL GQYSCPVTTA APEAQLWFDR GLIWTYGYNH AEAAACFRRA LEHDPDCAMA
61 HWGLAYASGP NYNMPWERWD SATRAEALAT SYDASQAALA RVAGGTPVEQ ALIRALPARY
121 PQRELDADMH RWDHDFADAM RAAFAAHPGH LDLRAIYAES LLNLTPWQMW DLATGQPAAG
181 AATREAQEVL ETALSEAPGA MHHPGLLHLY VHLMEMSPTP EKALKAADVL RTLVPDAGHL
241 VHMPTHIDVL CGQYHDVVHW NRRATLADRK YLDREGAFNI YTGYRIHNCH FAIYGALFLG
301 QMQPALEANR DLWDSVPEEM LRMESPPMAD YFESYMAMGP HILIRFGRWD EAIALEPPAD
361 PDLYRTLTAT VHYARAVAFA ATGRVAEAEA EEQVFLAAAA RVPESRLLHN NRVVDLLEIA
421 KEMLRGEIEY RKGSYDLAYA HLRRSIELDD TLPYDEPWGW MQPTRHALGA LLFEQGHVDE
481 AETVYRADLG LGGQLSRAAV HPDNVWSLKG LHDCLKARAE TVEIIQIRQR LDLALARADR
541 AVGASCFCAQ AAMRAAG
SEQDB ID: 3101377DDF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLCPSSDAG GRVNMRAILL PLLLCLAQPV LAERQSFPPR DEAADNPAVL AARDALRAAV
61 AARDLGRLSA AACADLSLSD DGPGGPEELR QMLTVSDTNS ETTVETRWQM LAKALAAPGY
121 FDAEGEFWMP HHWRIQLPAR IDPAQAHFVT GANVNLRKTP ERTGEILTQV SFEVVLTAGF
181 DPGAEYRAII LSDGTRGYLH RDYLTPMSGP RAALAQSPEG IWQLCTFTSG R
SEQDB ID: 3101377DDG
Reference:
3101377
Name: transcription-repair coupling factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mfd
Sequence:
1 MGGAPEGFDA RLILNEVARA GAPVLHVARD DKRLEAMRAA LAFFAPDLPV FVFPSWDCLP
61 YDRVSPNADV SAARMATLAA LVHQMPDRFV LLTTLNAATQ RVPARDLLRE AAFSAQVGRR
121 VDEQALRQFL VRMGFSQSPT VMEPGDYAIR GGIIDIYPPG DSGPVRLDFF GDVLDGARRF
181 DPATQRTTEK LDLIELAPVS EVILDEAAIT RFRQNYRIEF GAAGSDDPLY EAVSAGRKHQ
241 GVEHWLPFFH ERLETLFDYL PAATVTLDDQ VTPTRLARWD SIQDQYETRR LAMTDRSRTD
301 SVYKPLPPGL LYLDDGDWSA QLADRRVMQF NPLPQASGPG VIDAGGRIGR NFSPERALEN
361 VSLFGALVDH LKVRMADGPV LIASYSEGAR ERLTGLIEDE GLAEAIPVTN GTRIGKRGLH
421 LAVWALEHGF EAPGLTVISE QDVLGDRLIR QPKKRRKAEN FLTETQSLTP GDLVVHVDHG
481 IGRYRGLEVI TAAGAAHECI ALDYAEEARL YLPVENIELL SKYGHEEGLL DRLGGGAWQA
541 KKAKLKERIR EMADRLIRVA AERALRKAPV MDPPPHAWED FSARFPYQET DDQLRAIGDV
601 MDDLHSGMPM DRLICGDVGF GKTEVAMRAA FVAAMSGLQV AVIAPTTLLA RQHAASFRDR
661 FRGFPLEVRQ LSRFISAKEA QQTREGLARG TVDIVIGTHA LLAKGIRFQN LGLLIIDEEQ
721 HFGVGHKERL KQLRSDVHVL TLTATPIPRT LQLSLTGVRD LSIIGTPPID RLAIRTYVSE
781 FDAVTVREAL LREHYRGGQS FYVVPRITDL PDIEAFLKEQ LPELTYVVAH GQMAAGELDD
841 RMNAFYDGKY DVLLATTIVE SGLDIPTANT MVVHRADMFG LAQLYQIRGR VGRSKARAYA
901 YLTTKPRARL TPAAEKRLRV LASLDTLGAG FSLASQDLDI RGAGNLLGEE QSGQMPDVGY
961 ELYQSMLEEA IAKIRSGQME GLSEADDQWA PQINLGVPVL IPEEYVPDLD VRLGLYRRLS
1021 SLTTKVELEG FAAELIDRFG KLPKEVNTLL LVVRIKAMCK RAGIAKLDGG PKGATIQFHN
1081 DKFASPAGLV EFIQAQKGLA KIKDNKIVVR RDWRSEADKI KGAFAVARDL ADKVAAEKKS
1141 KA
SEQDB ID: 3101377DDH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWYSSIFEL IDMRSFSNLW FWIALAVVWS SASHWVLGVP YDMVTRARRV GGQAAQDLND
61 IVRINVNRML YIVDTAGLLL FSFSCFMLSV LAMLGFYYGM EFAQAVFMLA FPMSLVALLN
121 LATARRVRAQ ELMGEDLARA IGRCRIYTQI IGMVSIFFTS LWGMYQNLSI GVLG
SEQDB ID: 3101377DDJ
Reference:
3101377
Name: porphobilinogen synthase, Class: EC4.2.1.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemB
Sequence:
1 MTPTVAAFPA ARFRRARKSP ALRALVRENS LGVDDLIWPV FVRDGEGIEE PVPSMPGVMR
61 RSVDRIAQAA VEAQALGIPA ICLFPYTDAA LKTEDCAEAW SPDNLSNRAI RAIKAAAPDI
121 AVMTDVALDP YNINGHDGYV VDGEIVNDET VEALVKMTLA QAEAGADIIG PSDMMDGRIG
181 AMRQALEAAG HRNVLILSYA AKYASAFYGP FRDAVGASGA LTGDKKTYQM DPGNSDEALR
241 LIQRDLSEGA DMVMIKPGLA YLDICHRVKQ SFGAPTYAYQ VSGEYAMIKA AAQNGWIDGD
301 KVMLESLLAF KRAGCDGILT YFAPDVARIL QG
SEQDB ID: 3101377DDK
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSIHTPRLS RRGFALGMAG LTLTAACGNG VGNSNASQID ARVNATLTEM YAQFPNTVEI
61 SHKAAGMLVM PLLTEAGFVF GGGYGRGALR VDGVTVDYYS AVKGSAGLQI GAQQYAHVLF
121 FMTQGALSEF RRSSGWSAGA DLEYVVSDQG DSLAADTNTL RSPILAAVFG RAGLRVGATL
181 EGTKYTRIIP
SEQDB ID: 3101377DDL
Reference:
3101377
Name: penicillin amidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLLFRWLLR LAAGLIALAV AAVALVYYLA SQSLPDYDQT QEVAGLTAPV EIVRDTHNVP
61 HIFGASDPDV FFGLGYAHAQ DRLWQMTMLR RTVQGRLSEV FGPRTVAIDR LLRRLDLARL
121 AQQSVSAQDA YTTAALKAYA AGVNARLAEI NDEALGRGAP EMFLFNAPVA PWQPADSLAI
181 IKLMGLQLSG HLEEEVLRAR TSLMLGDPAR LVDILPDAPG TGTAALPEYA QLFPGLPRYA
241 AGRDTPHDPL MPLPRRGLAG ASNAWAAAPS RSASGGTLLA NDPHLGFAAP STWYLARLEL
301 ANGGVIGGTI PGMPAVLLGR SERLGWGLTS SYMDDQDLFV ERLNPDNPEE YLTPDGYKTF
361 ESRPSIIEIK GAAPITLTLR WTENGPVLPG SVYDLETITP PGHVMSLGWT MLDARDTSMS
421 AALALINAGT VQEAIRASEA YVGPSQNLTL ADRETVALKM VGAVPRRDPR HQSQGRLPAQ
481 GWRAENRWQG RMPYASNPEF VSPVGGILGN TNNKLLERPF PNHVSFVWGD TQRVTRWQKL
541 MQSREVHTRD GFIEAQLDPV SPAARTLLPL IGADLWFTGE AAPEGTPERQ RQIALSLLAE
601 WNGEMSEHLP EPLIYAAWVR ALQKRLITDE LGPLADEYKQ VEPLFIERVF RDIDGASVWC
661 DIRQSAPRET CTEIARLALD DALVWIGDRY GSALESLRWG DAHQATHDHP VLGEVPVLRY
721 FVNIRQSTSG GDHTLQRGRT SGEDPDPFRN VHGAGYRGVY DFADPDSSVF VISTGQSGHF
781 LSRYYDDQAQ LWRRGEYIPM SLDADLARAA AVGVTRLLPA PE
SEQDB ID: 3101377DDM
Reference:
3101377
Name: Na/H antiporter-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSYAADLIA LGLLFLTGLA ADQLGARSRL PRVTLLLICG LLAGSAGFDL IPESLAALYP
61 IISVIALSMV AFLLGGELSL RTLSGHGRAI VVISVMVVLV TQLTVSAGLA MIGMPLAAAL
121 MVGALATATD PAATLDVIRQ GRASGDFPRR LKGIVAIDDA WGVLLFGLVA VLAGAVEGNG
181 SAHGLLGGAL VEIAGSVALG LAVGLPGASL TGRLSGGEPL RIEALGLVFL TAGLSLWLDL
241 SYLIAGMTAG AVIVNLAHHH KRAFREIEHI EWPFMIVFFI LAGASLDLSA LWAVGPLLMG
301 YVALRVLGRV LGGWAGAALA ATARGERPWY GPALLPQAGV AIGMALIAGD LFPQYADMIT
361 ALAIGATVVF ELAGPLAAAY ALRRVRDSRD QSAA
SEQDB ID: 3101377DDN
Reference:
3101377
Name: GTP-binding protein, Isotype: HflX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hflX
Sequence:
1 MMEHDRARTR AWVLHPELKS DLDRRDPVPA LEEAVALAAA LPDLDVVGSG IVRLPKPHPG
61 HLFGSGKVEE LATLFHDNEV ELVLIDGPLS PVQQRNLEKA WKVKILDRTG LILEIFSDRA
121 RTREGVLQVE MAALSYQRTR LVRAWTHLER QRGGLGFVGG PGETQIEADR RAIDEQLVRL
181 KRQLDKVVKT RELHRKARAK VPYPIVALVG YTNAGKSTLF NRLTGAEVMA KDMLFATLDP
241 TMRRVVLPDG PEVILSDTVG FISDLPTELV AAFRATLEEV LAADLIVHVR DIHHAATEEQ
301 ARDVETILAS LGVDEGRPKF EVWNKVDLLD PDKRAALRER TARDPSLFAV SAVTGEGLES
361 LLTAIAEALA ETRSEAVLTL GFADGKRRAW LFAQDVVQAE EQSDDGFRLT VLWTPRQAAR
421 YAAL
SEQDB ID: 3101377DDP
Reference:
3101377
Name: nrfA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASDRQNLQD AFLNHVRKTK VPVTIFLING VKLQGVITWF DNFCVLLRRD GQSQLVYKHA
61 ISTIMPAQPI SLYEGEDAN
SEQDB ID: 3101377DDQ
Reference:
3101377
Name: trk system K uptake protein, Isotype: TrkH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trkH-2
Sequence:
1 MVRRRQTSET GLLRQLPLAL LIWGLFSLMM WVPAVYALTL NDHPTSRSFF YAGILGLVVV
61 TTISLARAGR PSRHGLLGQL AVLLSTFAVL PLFLAVPFHD ALKTTSFLNA YFEMVSAITT
121 TGAEMFPDPG RLSAPLHLWR AQVGWLGGLV MWIAASAILA PLSLGGFEVT AQGQPGRVLV
181 GQGESVDPRG RLLRVAATLA PVYAGLTLVV AILLLAAGDS GLVAICHAMS VMATSGISPV
241 GGLSGGASGL TGEAILFLFM FFALSRLTFS SDTAMRGHAR LDQDPEFRIG LLILLGVPAL
301 LFLRHWSGAI DIASGENLTL ALRALWGSLF TVMSFLSTTG FESTDWAEAR QWSGLGTPGM
361 ILLGLSVIGG GVATTAGGVK LLRVYALYLN GTRELQRLVH PSSVSSATGR NRRIQRGGAF
421 IAWVFFMLFA ISLAAIALAL AAAGSDFETA MVLSIATLST TGPLIEIGAQ EPIRLIEMPA
481 AAKLILSGAM IIGRLETLAF IALITPALWR N
SEQDB ID: 3101377DDR
Reference:
3101377
Name: trk system K uptake protein, Isotype: TrkA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trkA
Sequence:
1 MKVIICGAGQ VGWQIARHLS GELNDVTVVD NNPDLVRRAT ETLDVQGIAG FASYPDVLEK
61 AGARDADMII AATYSDEVNM VTCQVAHSVF GIQRKIARLR SKSYLNAIYS DLYRREHLPI
121 DVVISPEREV AAAAMRRLSA PSAFDTETFM DGQAQLVGLS VDEASPVINT PLRQLTDLFS
181 TLRAIVVGIR REGTLFAPEP GDQIFAGDEC YVFCHVDDVS RTMEVFGKTH KKQDRVVIVG
241 GGNVGLEVAR ALEEHKTRIH AKVIERDRGN AERAAEALER TIVLHGDGMD AGLLAEAGIA
301 RADAMLAVTD DDRTNMLAAV RAKAEGCRLA IALINDPTLV ALMPPLGIDA YINPRATTVS
361 SILRHIRHGR VRQVYSIGDA EAEVIEAEVL STSPMAGQRL RDIDFPEGVL VGAVRKGDKV
421 LRPTGELRIE EGDVIAIFAM ADDVPEVERL MQVSIDFF
SEQDB ID: 3101377DDT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGPGFGGTL GAMRVLIPTL AATVILTGCG PLSIYYREGV SVTRQQSDTL DCEVKALRDA
61 PVANKVQQSP PIFYPGRTVC NAAGQCYTTP GSWAPGSVYT VDVNSGLRAR VEQQCMAAKG
121 YAPVELPRCR EAVAAQVQPV RGAKLPALGP TSCVVTYQDG SFQVVTPRPA G
SEQDB ID: 3101377DDU
Reference:
3101377
Name: nitrogen assimilation regulatory protein, Isotype: NtrX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ntrX
Sequence:
1 MSDILIVDDE RDIRELVSDI LEDEGYTTRL AGTSDECMAE INAEPPGLLI LDIWLKDSRM
61 DGIDILKAVK RDNPDVPVVI ISGHGNIEIA VAAIKQGAYD FIEKPFNIDQ LMVVIRRAME
121 TSRLRRENAQ LKRREVTCAD MIGQSAAFRA MIGQLDKVTK SNGRVMLRGP AGAGKEIAAR
181 YIHAHSNRAN APFVTVNCAG VEPERMEEML FGRESQERGV EPGLLEQAHG GVVFFDEVAD
241 MPLGTQSKIL RVLVDQQFQR VGGADKVRVD LRVISSTNRD LEVEIQAERF RQELYHRLNV
301 VPIAVPSLED RREDIPVLAA HFIDQCHQGQ GLPLRALSEE AVALMQTMSW PGNVRQLKNL
361 IERVLILGEG TGDIEARELP SDEDKAAEEG RVVLSGALAT LPLREAREAF EREYLLTQIN
421 RFGGNISRTA SFVGMERSAL HRKLKSLGVV TSSKSGARVA HMDEEIETVE
SEQDB ID: 3101377DDV
Reference:
3101377
Name: nitrogen regulation protein, Isotype: ntrY, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ntrY
Sequence:
1 MATRSQNGPF LSLSEWRKTR KARNIGTLGL VVLGPALTVA TYLVTGPFDL GAGSTTLRLI
61 LLADLVYILA LAALVLSQVG RLVAARREKS AGSRLHLRLI GVFTLLALIP TITVAIFAGL
121 TLNIGLEGWF SDRVRNVVGS SLAAAEAYEQ EHREGLTQDA RALARYLDQA RTLNFFISDA
181 ELRGVLAQGQ GQIQRGLREA YVVDGIGEIR ARGDRSYQFD YEQPEPEQFR AAQTNGHVII
241 QDWDNNEFRA LVMLQAYPDR YLYVSRVVDG EILNLLDDTK ETVHLYQQLE NERGRVLFEF
301 GLLYLGFAVI LILAAVWLGL WFAERLSRPV GRLTTAAQRV GGGDLGVQVP EEPGDDEIAM
361 LGRYFNQMTR QLKGQRDTLL ENTHQIERRR RLFDSVLSSV TSGVVGLDSQ GKVTFVNRSA
421 ERLLDWSGDE QSLDLAVAVP EFVSLFESLV AAGQETVQAE IKVTRKGQLE NLLVRMSTRR
481 GEDDTLEGYV IAFDDVTDLV SAQRMAAWGD VARRIAHEIK NPLTPIQLSA ERIKRKFSRK
541 LDEEDCDSLE SMTDVIVRQT NDLRRIVDEF SKFARMPEPD RHEEDLTRLV RDAVLLQQTG
601 QPDVRVRADL PEAPLMGNVD ATMLSQALTN LIKNAGEAIE TLVKKGAPEG LAPEIRVTLT
661 GDAEGSQITI ADNGIGLPED RARLFEPYVT TRDEGTGLGL PIVKKIIEEH GGTLHLEDAP
721 VFDGQDHFGA MAVIRLPGYD PASRTAMQRQ AARNKAKAGP T
SEQDB ID: 3101377DDW
Reference:
3101377
Name: nitrogen regulation protein, Isotype: NtrC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ntrC
Sequence:
1 MDGTVLVADD DRTIRTVLTQ ALTRAGCKVH ATSSLTTLMR WVAEGKGDVV ISDVVMPDGN
61 GLEMLPKIAQ DRPGLPVIVI SAQNTIMTAI QAAEAEAYDY LPKPFDLPDL MKRTARALEQ
121 KRRTVSSEPR EEGAERPDEL PLVGRTPAMQ ALYRLVAKVM NTDLPVMISG ESGTGKSLIA
181 RTIHDFSDRR TLPFISVTAS DLMDLEGPAR VLARVKGGTL LIDEIADIGD ELQGRIVRMM
241 DAPGDYVPRF MATSQGDPAR AMEAGKLRRD LYYRLCGAPI HVPALRERVD DIPLLTEYFL
301 AKAERDGAPK RWLGAGAAEL FRIYSWPGNV RQLENAVRRL SLISRAEEIS RTEVEQVLGN
361 QPELEPALGG RGDSEKLSAS VARHLQRYFD LHGNVLPPPG LYQRILREVE APLIEIALEA
421 SGGNQAKCAD LLGINRNTLR KKITDLDIEV TRRRKLM
SEQDB ID: 3101377DDX
Reference:
3101377
Name: nitrogen regulation protein, Isotype: NtrB, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ntrB
Sequence:
1 MSAESALWAS LPVPAFLIDA DDRIVDVNSA AEGFLNLSRK AVLGHPIWDQ LAIDAPIEPA
61 FERARGQGTP LFVNDIDVGS GNRAPLQCAI QIAPLVGSPG VMMMLVSPRE LAGRMTQSHS
121 VKSAAQSAIG MAEMLAHEIK NPLAGITGAA QLLSMNLAPE DLELTDLIVA ESRRIVKLLE
181 QVEQFGNLSV PDFKPVNIHD VLDRARRSAL LGFGAHMKII EDYDPSLPLA YGDPDQLLQV
241 VLNLLKNASE AAPGGGTIRL RTYFEHSFRL RRNDGSGQSL PLQVEVIDDG PGLPEEIRAD
301 IFDPFVSGRE NGTGLGLALV SKIISDHDGW IAVDSVPGRT VFRLSLPRVP KDRGEKESN
SEQDB ID: 3101377DDY
Reference:
3101377
Name: tRNA-dihydrouridine synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLHLGDKTL APPVILAPMA GITDRPFRDL VMEFGAGMVV SEMVASQEMV QAKPGVRERA
61 ELSADVENTA VQLAGRDTHW IAEAARQVAD RGARVIDINM GCPAKKVTNG YSGSALLKTP
121 DHALRLIEAV VAAVDVPVTL KTRLGWDDTL MNAPDVARRA AEAGVRMVTI HGRTRCQFYK
181 GRADWAAIAA VREAVDVPLI ANGDITCAHT ARQALDRSGA DGVMVGRGAQ GRPWLLAQIA
241 HALYGTPAPE VPQGAELADM VARHYQAMLD FYGRELGLRV ARKHLGWYMD EAATPAPLRK
301 LVLTARDPET VLHLLPEALC GNAEEAA
SEQDB ID: 3101377DE
Reference:
3101377
Name: heat shock protein, Isotype: Hsp70 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLGVDFGT SNTAAGLVQA GHPRVLPLEP GAQTLPTAVF IDFAARRYVY GTDAARAMMD
61 GQEGRFLRGL KSILGTPLAR EPRMFLNERL TLIEVIARFL AEIRTRAERL SGERFDRALS
121 GRPVHFHSAS AERDAQACTD LHDAYLMAGF SEVCFLPEPE AAALAVAGQG RMLIVDIGGG
181 TSDFTLCDRR GTTTRMLASR GLRIGGTDFD RVLSLDHAMP LLGYEAQIGA ELGEASHSAP
241 RALFHDLASW EKIAFVYDPA TLREVRRWVR LAEQPRLFER LAEVLESHLG HDVAYAVEAG
301 KIAANGAAAG RIALDIVERG LGADLGNAAM QAALAGFADE IATCAMQTVR DAGVGPDSVD
361 QVVFVGGSSL MGVIRAALAR VLPGAEQQDS EVFTAVVHGL ALASEDQ
SEQDB ID: 3101377DEA
Reference:
3101377
Name: 2C-methyl-D-erythritol 4-phosphate cytidylyltransferase, Class: EC2.7.7.60;EC4.6.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispDF
Sequence:
1 MKQRPSHNES PRIKGQELRI CLIFNRFTTG HCQRRRHPIK IGHHPPAPRP RTAMTTAAII
61 VAAGRGTRAG GGVPKQWRPL AGRRVADWTL DRFALRQITH VVLVLHPEDH DAWDEFATTP
121 LILAPGGSDR AGSVRNGLAA LDGLGITKVL IHDVARPCVS AATIGAVLDA LDAHPGAAPG
181 LAVTDALWTG AEGLVTGTRE RDGLFAAQTP QGFRYDAIVA AHAAHPGGAA DDVEVARAAE
241 LTVAIVPGDP DNLKITRAED FARAERILRQ DMDVRLGNGY DVHRFGPGDH VILCGIKVPH
301 DRGLQGHSDA DVGMHAVTDA LYGALVEGDI GRHFPPSDPQ WKGAASEIFL RHAVDLVRAR
361 GFAVSNIDCT LVCEYPKIGP HALEMQAEMA RIMGLEASRV SVKATTSERL GFTGRSEGIA
421 ALATACLVKP
SEQDB ID: 3101377DEB
Reference:
3101377
Name: phosphatidylglycerophosphatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIASLIGTV GGVGYLRPAP GTWGSLAALP LAWVLHQLGG FPLLALATLG AFVAGLWATR
61 VMTAGQTDHD PSEIVIDEVA GQFLALWALS LPAWSHGIEI SALWPGWIAA FVLFRLFDIT
121 KPGPVGWADR RGDPMGVMLD DIIAGLFAAI GTALLAALSH GVLGL
SEQDB ID: 3101377DEC
Reference:
3101377
Name: competence/damage-inducible protein CinA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNVADLLERA KARGTKIATA ESCTGGMVIA ALTDIPGSSA VVERGFVTYT NSAKQEMLGV
61 RKASLDAYGA VSEQVAREMA EGALDHSRAT LAVAITGIAG PGGSEFKPEG RVCFALAGDG
121 IATSSETVDF GAPGRAQVRA AARDHALALL DRGLSLIAP
SEQDB ID: 3101377DED
Reference:
3101377
Name: ammonium transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: amt-1
Sequence:
1 MKKSGKNRHV SGRPPLFPAT EIRSTAPDTR NRSKGERPMN GADTAWIIVA TALVLFMTLP
61 GLALFYGGLV RARNVLSVFM HCFAIACLMS ILWLVAGYSI AFGGGTSGFW GGLDKVMLIG
121 VTADSLSGTL PEILFFAFQM TFAIITPALI VGAYVERVGF GFVLTFSGLW MLLCYAPVVH
181 WIWGGGMMSD GGIFGETGVR DFAGGIVVHE TAGLAALIIA VMLGPRRNRT TPPHNPGFVM
241 IGAAMLWVGW FGFNGGSQLA ADGGAAMALT VTHISAATAS LSWALWERIK YGKASLVGLV
301 TGTIAGLASI TPASGFVGPA AALLIGAVAG ILCQEAVNLV RNWLRIDDTL DVFAVHGVGG
361 IFGTLMIAVL GAGSWVAQLG GLVFVGLFTT GVTIVLVKVV ALVTPLRVDA ETETNGLDLS
421 VHGERAYDMS S
SEQDB ID: 3101377DEE
Reference:
3101377
Name: actC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLNYRRLGT QDVAAWRALM LEGTRDFPLG FLQSAAEVQA LSGERCREIL GYGALRGVFR
61 QDALLGLCGY RPQMFARMAH RVELGPFYVT RKAQGTGVAD RMMAGAIAEA RSEGRSLVEL
121 YVDAENHRAI AFYQRHGFRL LARLPDCVRI DGGARVDLFY RLDLSPRDGA
SEQDB ID: 3101377DEF
Reference:
3101377
Name: MmgE/PrpD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPELTRTLAE FATGSITTTP AARLVTSLSA LDWIAVGRAG VEEPVSRILR EMVLEEGGTA
61 RAHLFGGGAA PLRGAALVNG TVSHALDYDD THFAHIGHPS VAVFPAVLAM AESRDAAIVE
121 LLEAALVGME LSVRVGLWLG RGHYQAGFHQ TATAGAFGAA AAAGRLAGLT PQRMAQALGL
181 TATRAAGLKA QFGTMGKPYN AGLAAAAGIE AVELVRRGFD ANPLAMEGEY GFGATHHGAD
241 EMSALEGLGE SWLFDQVSHK FHACCHGLHA ALEAARSLDI AAPEVAQLSV RTHPRWLSVC
301 NQQAPSTGLG AKFSYGTVLA MRALGHDTAR LDSYSDALCA DPRLIELRDR VEVIGDDSLS
361 ETQAHLSLLR RDGQRQEVSH DLMAPLTLAE REERVRAKAA KLIGGSLADE IWALLRTGGG
421 AADLALRLSA S
SEQDB ID: 3101377DEG
Reference:
3101377
Name: aromatic-rich family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTHSETRRL PYSAQQMYDL VADVAKYPQF LPWCAAARIR SITPQGAAQV MEADLVISFK
61 VFRERFGSRV TLFPGEMRID TEYLDGPFKY LKSDWAFADA PEGGCDVSFH VDFEFRNAIL
121 QGVIGLVFNE AMHRIVRAFE ERARALYG
SEQDB ID: 3101377DEH
Reference:
3101377
Name: hypoxanthine phosphoribosyltransferase, Class: EC2.4.2.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hpt
Sequence:
1 MTDRAYVIDE MISAKAIAAR IEALCREIQT EFADTDKLVV VGLLRGSFVF IADLVRELNL
61 PIEVDFLEAS SYGDAMESSR EVRILKDLRS PIEGRDVLVV EDIVDTGHTL NHVTHLLLSR
121 MPKRLKSIAL LDKPSRREVD FRADWIGFEI PDEFVVGYGI DFAQRNRNLP FIGKVRFTEA
SEQDB ID: 3101377DEJ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNWDDLQFVL SVVEAGSVAG ASRQMGVNHA TVLRRIAAFE ESVGTQVFDR TPRGYVLRPD
61 RLRLIAAARE VGQAVQSVHQ LAQGLDAPLA GHVRVTSTDT LCQCLLPEIL ADLRQSAGEL
121 RLSLISTNSH LNLSRLEAEL TLRPAPVLPE GLVGESPISM AFAAYAAPGC ENAGWLGFDG
181 AMRRSRPWAW LEPQLERGAA IGSADSFLVL REMVAQGLGR ALLPCFIARD DPRLVRLEVG
241 LPPETATPIW VACHEELADV PRLIRVRGLL CQALRARAAR FGP
SEQDB ID: 3101377DEK
Reference:
3101377
Name: cytochrome c554
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycF
Sequence:
1 MFAKTKTAIA AATLCAVGGL ALAGSHAQGE FAREIKARQA QMTLYAFNLG ILGAMAKGEA
61 EYDAEAAALA ANNLAAAKSI WMPTAWPAGS DNASVEGTRA LPAIWAADSD IGAKSQAMGE
121 AVAALQAAAG TDLEALRGAI GPVGASCGGC HKPFRAEE
SEQDB ID: 3101377DEL
Reference:
3101377
Name: diheme cytochrome c-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycG
Sequence:
1 MKLLRIGAVL ALAGLVVFWL ITRPERLAQG ALDGVEGDAA RGALVFAAAG CASCHAAPGA
61 EGEAKLVLAG GEGFASPFGT FYAPNISPSP DHGIGGWSQL DLANAMMHGT SPEGQHYYPA
121 FPFVSYANTE LGDIADLYAY LITLPVSDTP SRPHDVGFPF NIRRGLGMWK LLNTGKGWVM
181 TDPADAQVTR GRYLVEALGH CGECHTPRDA LGGLQRDKWL SGGPIPGSKG RFPDLTPKAL
241 TWSAEDIAYY LETGFTPDYD SAGGAMADVI QNTAQLPPED RAAIAAYLKA LPVN
SEQDB ID: 3101377DEM
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPGDLARLT ALRHALHRAP EISGAEARTA ATVAGLLREM GADRVLTGLG GHGVVAVFDS
61 GVAGPSVAIR CELDALPIPE ETDLAYASET PGHGHLCGHD GHMVIVLAVG EALAARRPAR
121 GRAILIFQPA EETGKGAMAL RADPRFAEVA PDTVLSLHNL PGLPLGMVEL CARATNCASR
181 GMAIRLFGKT SHAAAPQDGL SPAGVMAALM PRLAALGPGG ALDDGFALTT LTHARLGEPT
241 FGVAPGEGAL WVTLRTVTDA RMATLMGEAE ALVRAHAEPA GLRVEISYDD VFEACTNHPA
301 AVDLLAGACR AGDVPLVLTE QPQKFSEDFG QFGKGAEAAM LWLGAGVGHP QLHNPDYDFP
361 DALIPVGAGI FERALRSVLG TGPVNSQAAP
SEQDB ID: 3101377DEN
Reference:
3101377
Name: lipoic acid synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lipA
Sequence:
1 MRDLKIPEQR HPEKAHRPDQ AQPKKPDWIR VKAPGGKGYA DTRRIMRDNN LVTVCEEAGC
61 PNVGECWSQG HATMMIMGEI CTRGCTFCNI ATGRPDALDA FEPGRVAHAV EKLGLNHVVI
121 TSVDRDDLAD GGAEHFAQTI RAIRHRSPST TIEILTPDFL KCAPEVLEVV VASKPDVFNH
181 NLETVPGLYP EVRPGARYFH SLRLLQRVKE LDPSIFTKSG IMVGLGETEQ QVRQVMDDMR
241 AADIDFLTIG QYLQPTPKHH RVDRFVHPDE FASYEKAAYG KGFLMVSATP LTRSSYHAGD
301 DFARLRDARQ KKLGLA
SEQDB ID: 3101377DEP
Reference:
3101377
Name: antioxidant, Isotype: AhpC/tsa family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTGASLPNV IFHTRVRDEA VGGPNPYRWQ DMTTAAYFAG KRVVLFSLPG AFTPTCSTYQ
61 LPGFENGFAD FQNQGIDAIY CMSVNDSFVM NKWAEAQGLK NVTVIPDGSG EFTRKMGMLV
121 DKDNLGFGFR SWRYAAIVND GKIEAWFEEP GLMDNCPEDP YGVTSPETVL NWLVAANSEV
181 AA
SEQDB ID: 3101377DEQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKIDKLPWR DHAGGAHPIT GQADGPYSVR PLGDVIGLSQ YGIHLERLRP GSRSSHRHWH
61 EGEDEFVYVI SGELILIEDE ETVLTAGDAA GWPGGMPVAH CLENRSDCDA VFLVVGTRLD
121 RDIVHYPDHD LILHRDNNRR QYTRTDGSPI EGES
SEQDB ID: 3101377DER
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRYVSLMSFT LRQLHYFKAL VEQRNFGRAA EVCHVSQPAL SVQIRALEEV LGGPLVERRA
61 RDVVLTPLGR SVLPLVDQAL ASADRLDRFA RDQAGAASLS LGLIPTMAPY LLPGVLAELR
121 AQNLSLRVHV REARTEQLLQ ALHKGELDAA VLALPVSQAG LTSVELFRDR FLLAGSWSRL
181 ERLSQGVEAL RPTDLQPTQL MLLEDGHCLT DQALEVCGHD RAAAGINMGA SSLATLSRLV
241 AEGFGLTLMP ELAARSELAA VPGLRLHRFR TPEPARTVGL VRRSSTYRAR WFDDLERIIR
301 QVGEGIVTET RETQPSTPER G
SEQDB ID: 3101377DET
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGNWAENTVP GWVPESAQRY LAHTEAGFSI RDLARGAGCH ASTVLRQIRR VEMRRDDPLV
61 DAALEALAAA HFPPLKLSKT PVSRRGSQPE DTAPMTVPAP QTEETPDSAT FDQEATRILR
121 RLCESGAVLA VAEDMDKAVV VRDDGKGGNT RTAVVSCAMA QALALKDWIA CDKPGRISRY
181 YLTTAGRGAL GRLLAEAENR ARAAQDGFAE AQSPFAAQHR VMGDKTVDGE AGERPRRVRY
241 NMAESPLIAL ARRKDRDGQP FLDDTLVRAG ERLREDFELA QMGPNIAQNW DRFLTGGARG
301 GFQADSGIGH GPEAARNRVA RALSDLGPGL SDVALRCCCY LEGLELAEKR MGWSARSGKI
361 VLRIALQRLK RHYEEQSGRD RLIG
SEQDB ID: 3101377DEU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANTFPGKGT VMQDLMTMVS QLRRPRLLIR AARFGQAEYN RDRHLQRILG YGKLPRPAAA
61 LMRLMELERV LDEQRRADDA GYSLPRHVDL LIAMMGEAQL VQTSHAPQSL QPT
SEQDB ID: 3101377DEV
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEEAMTRRRA RGGGGAARRA ERSAVVIETA KYIERNIPNF EVLNEEALEI IEANAETVLA
61 EIGVNFVNNP AALERWRAAG AEVEDERVRI PRGLARKLCS TAPGQFTQHA RNPAKSVVVG
121 GRNLVLAPVY GPPFVRDAQG GRRYATMADF EKFVKLAYMS KWLHHSGGTV CEPTDIPVNK
181 RHLDMLMAHM TLSDKPFMGS VTAPERAQDS VEMCEILFGK EFVRDNTVMT SLININSPMT
241 FDDIMMGALE VYAASNQACI ISPFIVGGAM APVSVAGTLT QVLAEVLAGV AYSQLVRPGA
301 PVIFGAFVSS IDMNSGAPTF GTPEASLVTY GAGQLARRLG LPFRSAGSFC GSKLPDAQAA
361 YETANSLNMG LLSGVNFMLH ACGWLEGGLV ADFEKFVMDA DQLGVLHGLA KGVPVDAEHQ
421 AMGAIREVGP GGHYLGCAHT QANFKSAFWK SELLDYKPFE TWEEEGARDT YALASSRVDK
481 LMDAYQQPTL DPDIAAALAA YVAEKKASMP DAFM
SEQDB ID: 3101377DEW
Reference:
3101377
Name: GMP synthase, Class: EC6.3.5.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: guaA
Sequence:
1 MSQTSHDRLL IIDFGSQVTQ LIARRLRELN VYCEIHPYQN VTMDFVREMA PRAVIFSGGP
61 DSVTREGSPR APQEIFDYGV PILGICYGQQ TMMTQLGGRV ESGHGTAEFG RAYVTPKGTL
121 DILDGWFTDG REQVWMSHGD HVAEIAPGFE VYGTSPGAPF AITADTSRHF YAVQFHPEVH
181 HTPNGAKLYE NFVRLAGFKG DWTMGAYREE MIRTIREQVG DKKVICGLSG GVDSSVAAIL
241 IHEAIGDQLT CVFVDHGLLR KNEATEVVGM FRDNYNIQLI HADESDLFLG ELDGQSDPET
301 KRKIIGKLFI DVFQKHADTI EGAEFLAQGT LYPDVIESVS FSGGPSVTIK SHHNVGGLPE
361 KMGLKLVEPL RELFKDEVRA LGRELGLPQS FIGRHPFPGP GLAIRCPGEI TREKLEILRE
421 ADAIYIDQIR KHGLYDEIWQ AFVAILPVRT VGVMGDGRTY DYACALRAVT SVDGMTADYY
481 PFTHEFLGET ATRIINEVKG INRCTYDITS KPPGTIEWE
SEQDB ID: 3101377DEX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPIARAALW MTGAIASFSA MAVAGRELSA VHDTFEIMMY RSFVGVLVVS LILSVTGTWH
61 QVSTRALGLH ALRNAVHFTG QNLWFFAVTV IPLAQVFALE FTQPLWVILL SPLLLGERMT
121 RVRVAAAVIG FVGILIVARP GASSLNIGIL TAALSAIFFA MTTISTKKLT RLASIGCIMF
181 WLTVMQAVLG LVASGHDGQI ALPTLGTAPY LVLVGLAGLL AHYCITNALA IAPATVVVPI
241 DFARLPTIAV VGMLLYGEAL DIWVLVGAAV IFAGNYLNIL AETRNTAR
SEQDB ID: 3101377DEY
Reference:
3101377
Name: outer membrane transporter, Isotype: OMPP1/FadL/TodX-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEISRRTQMK NALSGALALC ALTTAAQAGG LDRSGQGINI LFEEGDAIQF RLGWTDPRVS
61 GSLGGMPSGN VANSFVLPHF AYKKALSDRL DFALIYDQPF GADITYDAAY PLSQNPVPGG
121 RRDVLRAKAD TDALTAVFRY RFDRGLSVIG GLRAQRAEAT VTVPAAAGYS VTTDSPVDFG
181 YVVGVAWERP DIAARVALTY NSAIDHTLQQ SESLNPPPPA PPGFVATLPS TSTISTPQSV
241 NLDFQTGIAA DTLLFGSVRW VDWTALVYNP PNYPPLTNLV DYDSDTVTYS LGIGRKFSEA
301 FSGAVTLGYE RRTGDSLSDL GPTDGFWSIG LGGTYSLDKA KISGGVRYTD LGDATTNNGA
361 RFTGNSAWSV GLQITYALN
SEQDB ID: 3101377DF
Reference:
3101377
Name: pyrazinamidase/nicotinamidase, Class: EC3.5.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pncA
Sequence:
1 MHGLIVIDVQ NDFCPGGALA VPEGDAVVAP INAMMKDFDA VVLTQDWHPA GHSSFASSHP
61 GQAPFEMIEM AYGPQVLWPD HCVQGSPGAA FHPALRTDAD LILRKGFRAA IDSYSGFFEN
121 DRSTPTGLEG YLRSRGITRL TLAGLATDFC VQYSALDAAR LGFAVEVRMQ ACRAIDLDGS
181 LAAAIAAMKA GGIALT
SEQDB ID: 3101377DFA
Reference:
3101377
Name: transmembrane drug/metabolite transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDQKTLSPR AWAELLLLGL IWGASFLAIR VALDEVPVVT AVLHRTFWAA LLLWLVVWAS
61 RIALPRDPRV WGAFLVMGLL NNVIPFGLMA WGQLYIETGL TSILNASTAI FGVLVAAAVF
121 ADERLTPRRL LGVSIGFAGV VITIGFEHLT RFDPRSTAQL AVLAGTLSYA FAGAWARARL
181 GGLAPQLAAA GMLTGSSLIL LPAALLIDGP VTLSLQPVTW AAIGYYALVA TAGAYLLYYR
241 VLAMAGAGNL MLVTLVIPPV AIGLGAWIRD EALPANAFGG LALLALGLML LNRRPRRRD
SEQDB ID: 3101377DFB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRPAAPISK GANSKDEGGM IYGSARDWRA ASRKKVLFFG MSGLGKTHVS NRLRDNGDWF
61 HYSIDYRIGT RYMGEFITDN AKAEAMKVPF LRDLLMSDSI YIGSNISFEN LTPVSTYLGK
121 PGAPGKGGLP IAEYRRRQDQ FRHAEIYALL DTEYFIDRAQ RLYGYPHFIC DTGGSICEWV
181 DPEDPRDQVL SELSKHTLMI WIEGSEAHTA ELIRRFDKAP KPMSYQPEFL SRVWEAYLAE
241 NDCTPDEVDP DAFIRWTYAQ ALAHRQPRYR AMARNWGITV TAEQIGAIRD AADFDALIES
301 SLENRPD
SEQDB ID: 3101377DFC
Reference:
3101377
Name: DedA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTSLYHRTM ALADHRHALW ALALVAFLES SVFPIPPDLL MIPMILARPS RAWLIALVAL
61 VASVLGGLLG YAIGAFFYDS IGAPILEAMG KGDAMEAFNT RFNDFGFWAV LTAGVTPFPY
121 KVITIMSGWT GMPLATFVAT SILARALRFF LVAALLWKFG APVRDFIERR LGLVMTVFMA
181 LLIGGFFLVR YL
SEQDB ID: 3101377DFD
Reference:
3101377
Name: disulfide bond formation protein, Isotype: DsbB-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRNRLIMLA AGGSAAMLLA AWGFQYLGGM APCKLCIWQR YPHGAAALIG ALALASGWRI
61 LTWGGALAAL STGGIGLYHA GVEQGWWEGP TTCTSGPIGN LSAEQLMAQI LEAPLVRCDD
121 IPWELFGISM AGWNGVISIG LALIWLLAAT RRA
SEQDB ID: 3101377DFE
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKTDERLIA ALRHDARASL SDLALQLDLS RTTVRARIER LVQRGDILGF TITLKEDVLN
61 DPVRGLMMIE IEGRGAARIT RQLQGLKEVR AIHSTNGRWD LIVELGTETL EGLDHALARI
121 RLFEGVQASE TSLLLSTKKA T
SEQDB ID: 3101377DFF
Reference:
3101377
Name: arginase, Class: EC3.5.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rocF
Sequence:
1 MTLLYDQNHH WISTRFDQTL AKTATRPHLM SRKTCILIGA PVDSGKRRTG CLMGPDSYRT
61 AGLAEALADL GHRVEDLGNL SPAEHAPEPS DTHLHQPNRT IGWTNRLIRA AEQAMPRGLP
121 IFLGGDHALA LGSVAGVANH AARVGRPQFV LWLDAHSDYH TPETSASGNL HGTPLGYVTG
181 RGGFAGFPVI KNPVKQRNIC ILGLRSVDHA EREALQRTKI RFHDMRQIDE HGIARPLQAF
241 LDTWAKENGM LHVSLDVDFL DPSIAPAVGT TVPGGATMRE GHLVMEMICD SGLMTSLDLV
301 ELNPFLDERG RTAQLIVDLA ASALGRRVFD RPTRSFS
SEQDB ID: 3101377DFG
Reference:
3101377
Name: amidinotransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTIQAPMAV VMIRPHAFRP NPETRADNAF QTDSAAADTA ARARDEFDRA VTGLRAAGVR
61 VHVFDDTGVL DTPDSVFPNN WFSTHTGGHV AVYPMYAENR RRERRPDVIE LLKREYRVSD
121 VIDYSGLEQD GLALEGTGAM VLDHIGRIAY VARSHRADPV LLERFCAHFN YEPICFDAVD
181 ARGRPVYHTN VLMGIGTEYA LICLSMIPDP ERRRTVAERL AETGRSVIDL SPEQIGAFAG
241 NAIELTGHRR ILALSARAHA ALTPDQIAVI ERSAQLLPLA IPTIETAGGS VRCMIAGIHL
301 TRRPERTAA
SEQDB ID: 3101377DFH
Reference:
3101377
Name: Orn cyclodeaminase, Class: EC4.3.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: arcB
Sequence:
1 MTATTIPSDK ALVPFVSVDH MMQLVHSIGV EEMMRGIADY IEADFRRWES FDKTPRVASH
61 SPVGVIELMP TSDGELYGFK YVNGHPKNTK EGLQTVTAFG LLASVETGYP VLLSEMTMLT
121 ALRTAATSAM VAKYLAPKGA HTMAMIGNGA QSEFQTLAMK AICGLKSVRL YDIDPAATAK
181 AAHNLASQGI EVVSCASPEE AIEGAQILTT CTADKQYATI LTDNMVGSGV HINAIGGDCP
241 GKTELAEAIL HRSDIFVEYP PQTRIEGEIQ QLAPEHPVTE MWQVITGKVP GRSSDRQITL
301 FDSVGFAIED FSALRYVRDR LQETGLYHAL DLLADPDDPR DLFGMLQRAA PAKG
SEQDB ID: 3101377DFJ
Reference:
3101377
Name: alkylphosphonate utilization operon protein, Isotype: PhnA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnA
Sequence:
1 MNDTLPPCPD CASSFTYQVD ALLNCPECGH EWQATEEAEV GIRDSVGNLL ADGDTVTVIK
61 DLKVKGSSAV VKVGTKVRNI RLVGGDHDID CKIPGIGPMG LKSQFVKKAA D
SEQDB ID: 3101377DFK
Reference:
3101377
Name: HNH endonuclease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGDFRTDFV REPGALKHHP ALVLNADYRP LSYYPLSLWP WQEAIKAAWL DRVDIIAEYD
61 EVVRSPSVVL RIPSVVVLKD YVKPQKRVAF TRFNLFLRDE FRCQYCGGKG DLTFDHVVPR
121 AAGGVTSWEN VVAACAPCNL RKGSKSLRQA NMSLRRPPRR PQAEELQNVG RKFPPNHLHE
181 SWMDFLYWDA ELDA
SEQDB ID: 3101377DFL
Reference:
3101377
Name: RNA pseudouridylate synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAWFIRFNKP YDVLSQFTDR GSADSPRATL SDHIDLPGVY PAGRLDRDSE GLMLLTDVGR
61 LQARIADPRH KLAKTYWVQV EGVPDAAALR ALAEGVELKD GLTRPARARA MPEPPGLWPR
121 NPPIRERKSV PDSWIELTIR EGRNRQVRRM TAAVGHPTLR LIRARIGDWT LDGLVPGEWQ
181 SLPMPTTPSP STSQKQRPRR
SEQDB ID: 3101377DFM
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDIAVRPIR AEDVPQACAI LNRIIEIGGT TAFEQPVSED EFDAWYVNGA DLICCHVALD
61 AAGAVAGFQW LGRNDSLPEG CGDIASFTRR EPVLRGAGRA LFACTVAVAR DRGLAEINAT
121 IRADNALGLA YYGKMGFRDH VVTPAVPLRD GRPVDRISKR FDLRG
SEQDB ID: 3101377DFN
Reference:
3101377
Name: phospholipase/carboxylesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRVLRAERK APVSGDTRSA VVFVHGYGAN GADLLGLADV LGEHLPDTLF VAPDAPETIP
61 GMPFGFQWFP IPWLDGSSEE EARRGMEAAV ADFNAFLDAL MVDEDLLPEQ VVLFGFSQGT
121 MMSLHVAPRR EDPVAGVVAF SGRLLEPDLL ADEVVSRMPV LLVHGDADDV VPPQSLPQAA
181 EALQGAGFKE VYAHVMKGTG HGIAPDGLSV ALAFMRDKLS L
SEQDB ID: 3101377DFP
Reference:
3101377
Name: DNA-3-methyladenine glycosylase, Isotype: II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVGRIIETP DCVAEGAAWL AESCPRMAHA MTLTGPLPLR RRPDGFAELL SAIVSQQVSV
61 ASANAIWARM RAAGLIGPRK ILWASDDDLR AAGLSRQKIR YARELAKARI DFNGLRAAPD
121 ADVVAELTRV PGIGVWTAEI YAMFSLGRAD VFAPGDLALQ EAARVLYELP ERPSERALRQ
181 MALAWSPWRS VAARVLWAYY RVAKDREGIR
SEQDB ID: 3101377DFQ
Reference:
3101377
Name: transporter protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLADSHTND SRAKRNVVVL VAAQAILGAQ MPMIFTIGGL AGQSLASNVC LATLPISLIV
61 LGSMLAATPI SAIMQKWGRR AGFLLGALAG ALGGAVGAYG LYLSSFPVFL AGSLLTGVYM
121 SAHGFYRFAA ADTASDAFRP KAISYVMAGG LAAAIIGPQA VKATSDAYVI PFLGTYYAVI
181 AVNLLGALLF FFLDIPRPTP PAADSPRGRT RMELLKTPRI AVAVICAMVS YALMNLVMTS
241 TPLAVVGCGY DQGDAADVVT SHVLAMYVPS FFTGHLIARF GVEKVVAAGL VVLAAAGVVA
301 LQGVDLNNFF IALILLGLGW NFGFIGATTM LAGAHEPHER GRMQGLNDLL VFGGVTMASL
361 ASGGLMNCSG GNAVEGWTAV NLAMVPFLTL AGGALIWLTL RPRDA
SEQDB ID: 3101377DFR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDAFDADLT ACAELVQRAD PDRFAAAMAA PVAARRVLFP LYALAVEVAR APWASAEPMI
61 AEMRLQWWRD ALEELALGKP PRRHSVVTPL AGILSPQMAA RLDGFVAVRR WDIYRDPFED
121 DAHLTRYLEQ SSASLLCVCA TALGQADEDV LRDYGYATGL ANWFRAIPEL EARGRIPLLD
181 GTPAGIRRLA EAGLDHLSRA RAKRSLISPA ARPALLAGWQ SAALLRQVQK HPARVAAGEL
241 GLSPFARHLR LSLQAATGRW
SEQDB ID: 3101377DFT
Reference:
3101377
Name: 2-isopropylmalate synthase/homocitrate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRERLYLYD TTLRDGQQTQ GVQFSTPEKL RIASALDSLG IDYIEGGWPG ANPTDSAFFD
61 AAPATRARLT AFGMTKRSGR SAENDDVLAA VMNAGTGTVC LVGKAHDYHV TQALGIELAE
121 NTENIRASMA HIVAQGREAL FDAEHFFDGY RDNPAYALEV CRAALEAGAR WIVLCDTNGG
181 AMPADVARVV GEVIAAGIPG DRLGIHCHND TDQAVACSLA AVIAGARQIQ GTLNGLGERC
241 GNANLTSLIP TLLLKEPYAS RFETGVSAGA LADLTRISRM LDDILNRVPV KQAPYVGSSA
301 FAHKAGLHAS AILKDPSTYE HIDPSLVGNE RIIPMSNQAG QSNLRKRLTD AGLSVPPGDP
361 ALGHILERIK AREDEGYSYD TAQASFELLA RRELGQMPAF FEVKRYKVTV ERRKNKYDRM
421 VSLSEAVVVV KVDGEKLLSV SESLDDTGSD RGPVNALYKA LAKDLGRYSA ILSDMRLVDF
481 KVRITQGGTE AVTRVIIDSE DGKGRRWSTV GVSANIVDAS FEALLDAINW KLLRDCAGQG
541 AAAE
SEQDB ID: 3101377DFU
Reference:
3101377
Name: Cys-tRNA synthetase, Class: EC6.1.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cysS
Sequence:
1 MTTIKLHNTR TRTKEEFVPI DPDNVRMYVC GPTVYDRAHL GNGRPVVVFD VLYRLLRHVY
61 GADHVTYVRN FTDVDDKINA RAAERGRPIG DITAETTQWF LDDMGALGAL EPDHMPRATQ
121 YIPQMVAMIE ELVAKGHAYE AEGHVLFAVD SWKEHYGKLS GRSVDDMIAG ARVEVAPYKK
181 NPMDFVLWKP STPDLPGWDS PWGRGRPGWH IECSAMSYEL LGESFDIHGG GNDLMFPHHE
241 NEIAQSCCAH PEGHFANFWL HNEMLQVEGK KMSKSLGNFF TVRDLLDQGI PGEVIRFVFL
301 STHYRKPMDW TEKKAKEAEA TLRKWWRLTA PLDEMEIKPS PQFIDALTDD LNTPGAIAEL
361 HRLAKEKDYA ALEAGLEMLG LQETVNFGVA SFGFSTSVEV LEAANDLARR WMAYRDAKNF
421 EEADRLKKSA LLAGVDLSVS KEGGIQVPSA TINGSPTVDE LEALK
SEQDB ID: 3101377DFV
Reference:
3101377
Name: Asp aminotransferase, Class: EC2.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aspC-3
Sequence:
1 MRLSRRITGL TGGGSDGWDL FLQARRMIAE GIAVTELTIG EHDTRTHSSI LDAMDRSARG
61 GHTGYAMVPG TALLRDTVAA RVQERTGQRT TRDNVLITPG GQAALFAAHS AACDPGDTAL
121 FVDPYYATYP GTIRGVGALP RAVIARAEDG FQPRPDVIEA EADGAVSLLI NSPNNPTGVV
181 YGRETLEGIA KVCQDRDLWL ISDEVYDTQI WEGAHLSPRA LPGMAERTLV VGSMSKSHAM
241 TGSRCGWIVG PEAAISHLIT LATHTTYGVP GFVQDAAVFA LGQGRDLEEE IAAPFRRRRD
301 LAWHILAGQN AVRLSPAQGA MYLMLDIRAT GLSGEAFATA LLETHHIAVM PGESFGKAAA
361 GHVRVAMTVA DDAFVKALKT LCHFAAQQAS GLPEG
SEQDB ID: 3101377DFW
Reference:
3101377
Name: outer membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARSRTMKLL VPALVAVSMA AAPAMAGDWS GAYLGLGVGY GDADGPGARD GEAASFGGHI
61 GYNFDLGNRF VMGGELEYDR VNNDLGAGGG TLDEIGRLKV KAGYDFGPVL GYGVLGAARA
121 TSTFGNENGL VYGLGLAMPV TDYLSVSGEV LRHQFKDFGG AGNDFDVNTF NLRASLRF
SEQDB ID: 3101377DFX
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNDQPRSTAR AGGRSARHAA RSAALPDHLR PIRPGMSGGA LNLLSQQDME RIHSAALDAL
61 ERIGLADAPQ SGVDYLVGAG CILGEDKRIR FPRALVEDTL ARANRSVTLY SRDGKTDLEL
121 AGARVHYGTA GAAVHMVDVM GREYRDSTVQ DLHDAARICE RLDNIHFVQR PMVCRDIIDN
181 FEMDMNTIYA CCAGTYKHVG VSFTDPSYVA PAIEMLHMIA GSEANWRERP FVSNSNCFVV
241 PPMKFATESC LVMEECIKHG MPVLLLSAGM AGATAPSTVA GAIVQAVAEC LAGLVYVNAV
301 KPGAPAIFGT WPFGLDLRTG AMTGGSGEQA LLTAGCAQMH RFYDLPGGAA AGIADSKLPD
361 MQAGWEQMCS NVMAGLSGLN MVYEAAGMHA SLLGFCHESL ILSDDLIGQA LRCVRGIEVN
421 DETLAVDQIA QVCLGGSGHY LGTDQTLGRM QADYVYPALG DRTSPKEWVE KEKPDLIAKA
481 IARKEAILAE RSAARFDAAT DAAIRAKFNI HLPA
SEQDB ID: 3101377DFY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPKLLALLG ALGMALPATA WAQSSADTDG DGVLTLTEVQ AANPEVDPET FVRMDANGDA
61 VLDSEEVAAA QQAGLLPASD G
SEQDB ID: 3101377DG
Reference:
3101377
Name: sensory box sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVAGSPDVD HLSEYERRYS RRGLLIRYAR GRVRNFAGRQ IMTFAGSFIL AMTEGLHTAM
61 LAAFAALLGE VIDCLYLHRL PERLRQGQGY RRLLIGSTLT ALVQALTISF CVWLAWTGAR
121 SGLSPLFIGS FLAGAAINAG LVLPFHRPAA VARLAVYAGI GQYLFLIEAM EPGRLGDALL
181 LNAAGAVMLA FMVGLFLNFV NWGFRQHRRT TLDLIEQGRD LLRHQKEAQL LSLVARNAND
241 SVILADSEGR IVWTNESFTR TTGYSLDEAK GRYPGELLNG DKTDLEVSNA IADAVEAGRP
301 FRTEILNVTK DGREIWMETN LVPVLDRNGK VEVTVAIERD VTAAKAQAEE LAAARVAAEE
361 GARAKAEFLA TMSHEIRTPM NGVVGMAELL SETKLSIEQR QYVDTIRSSS TALLAIINDI
421 LELSRLDARK MELHPVNFDP VSCVRDTMRL LKPQAQAKGL RLSLETGADV PPLVYGDDGR
481 LRQVLINLLG NAIKFTERGG VTLRLRSEAQ DPGYLLTLEV EDTGIGIAAE KIERVFERFS
541 QADADTTRLY GGTGLGLTIS RELVALMGGR ITVDSTLGQG SCFTLCLPLG SPDDDAGQSD
601 GQVLSPAELD RLRGLRVLVA DDNRVNRLLM GKFLADLPIR LDFAHDGQQA VAMTQRQKPD
661 IVFMDMSMPV MSGIEATRQI RAAEGRQPLI VALTANTFDS DREACLAAGM DDFLSKPVGR
721 ADLFRCLLHH LPPTDAAPRT ASG
SEQDB ID: 3101377DGA
Reference:
3101377
Name: ribonucleoside diphosphate reductase, Class: EC1.17.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nrdJ
Sequence:
1 MKIERKFTTA GQDAYADLEF RSATSEIRNP DGTIVFRLDD IEVPTSWSQV ASDVIAQKYF
61 RKAGVPSRLK KVREKGVPEF LWRSVPDSDA EMGGEISSKQ VFDRLAGAWC YWGWKGGYFT
121 TEEDARAYFD EMRFMLATQR AAPNSPQWFN TGLHWAYGID GPAQGHHYVD YKTGKLTKSD
181 SAYEHPQPHA CFIQSVSDDL VNEGGIMDLW VREARLFKYG SGTGTNFSHL RAEGESLSGG
241 GKSSGLMGFL KIGDRAAGAI KSGGTTRRAA KMVIVDADHP DIEQFIQWKV LEEQKVASIV
301 AGSKMHEKML NGIFAAIRAW DGAEVDAYDP AVNEGLKAAI REAKKVAIPE TYVKRVLDYA
361 KQGHTSIEFP TYDTDWDSEA YNSVSGQNSN NSIRVTNAFL KAVEKDADWE LINRVNGKVA
421 KTVKARDLWE KVGHAAWACA DPGIQFHDTV NDWHTCPADG PIRGSNPCSE YMFLDDTACN
481 LASMNLLTFL KDGEFQAEDY IHATRLWTLT LEISVTMAQF PSKEIAQLSY DFRTLGLGYA
541 NIGGLLMNMG YGYDSDEGRA LCGALTAIMT GVAYATSAEI AGELGPFAGY ERNAANMLRV
601 IRNHRTAAYG KANGYEQLSV KPVPLDHSNC PDPRLVELAM ASWDEALSLG EKNGYRNAQS
661 TVIAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYFKI INRSVPAALE NLGYSSAQIE
721 EIVSYAVGHG TIGNAPGINH TSLTGHGFGP NELRKVDAAL ESAFDIRFVF NQWTLGEDFC
781 TGVLGIPAAK LNDPTFDLLR HLGFTKKDID AANDHVCGTM TLEGAPHLSE EHYAIFDCAN
841 PCGKKGKRFL SVDSHITMMA AAQSFISGAI SKTINMPNNA TIEDCQKAYE LSWSLGVKAN
901 ALYRDGSKLS QPLAAALIED DDEAAEVLET GTPAAKAAVL AEKVIEKVVV KEVIRSHREK
961 LPHRRKGYTQ KAIVGGHKVY LRTGEYQDGS LGEIFIDMHK EGAGFRAMMN NFAIAVSVGL
1021 QYGVPLEEFV DAFTFTKFEP AGMVQGNDSI KNATSILDYV FRELAVSYLD RTDLAHVKPE
1081 GATFDDIGKG EEEGLSNVTS VSDSAASKSL EVLKQISSTG YLRKRLPQDL VVLNGGASIG
1141 AVALDTAGDP VAALQTLVPE TGSATVAATG MDARTKARMQ GYEGEACGEC GNYTLVRNGT
1201 CMKCNTCGAT SGCS
SEQDB ID: 3101377DGB
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPLFGLLAA LLTVASCTQD IAVNSASALY QTRPKALIEG FAAACSEPGE TLRRPDPGTW
61 QCWVDLPADM TAAAILQHDG TLKALPQLVV QLQIAQQADG QFRATLQDYL NVPQTSGAAL
121 RIQGNAPGAQ EARNGLLRDM GGHIIGE
SEQDB ID: 3101377DGC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRAALCLLV WLTGATALWA ETCREDELRL RGSGSELRFT IELAQSPEER AQGLMFRESL
61 PRGAGMLFVF EHPQRVAFWM KNTLIPLDLI FVDQSGTVTR VHPNAIPHDE TPIPGGDAVF
121 AVLEINGGLA ARYGIAPGTQ MQHKVFSDGP AAWPC
SEQDB ID: 3101377DGD
Reference:
3101377
Name: cold shock DNA-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEELSSAYK VRGRVKWFDP TKGYGFVVAE EGGPDILLHV NVLRNFGQSS VADGAAIEIM
61 THRTDRGVQA VEVVSIVPPE RPETVLLSDF AEMDPEAIRA APLEPARVKW FDKGKGFGFA
121 NVFGSSEDVF LHIEVLRQSG LSDLQPGEAL AMRVIDGKRG RMAAEVLAWE AALNL
SEQDB ID: 3101377DGE
Reference:
3101377
Name: pyridoxamine 5''-phosphate oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLFKGMDMS DRTGIFAGDD PFAIARDWLA EAERSEPNDA NAIALATVDA SGLPNVRMVL
61 LKEIEPAAFV FYTNYESAKA IELEQAGKAA FVMHWKSLRR QLRVRGTITR EEGPQADDYY
121 ASRSLKSRLG AWASRQSRPL SSRAALMAEV AKITAAKGPN PPRPPFWGGF RLTPVEIEFW
181 ADGAFRLHDR FVWRRNSAGE SWVIQRLNP
SEQDB ID: 3101377DGF
Reference:
3101377
Name: enoyl-acyl carrier protein reductase, Class: EC1.3.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabI-2
Sequence:
1 MSNQLMAGKR GLIMGLANDK SIAWGIARAL ADAGAELAFS YQGDALKKRV DPLAAQLGSE
61 IVLPCDVGDE ASIDTLFDAL EQKWGKLDFV VHAIGFSDKN ELRGRYVDTS RANFKLTMDI
121 SVFSFTAVMK RAEKLMSEGG SAITLTYYGA EQVMPHYNVM GVAKAALEAS VKYLAEDLGK
181 DGIRVNSVSA GPIKTLAASG IGDFRYIMKW NEYNSPLRRN VTIDDVGKSA LYLLSDLSSG
241 VTGENLHVDS GYHIVGMKAV DAPDIDKG
SEQDB ID: 3101377DGG
Reference:
3101377
Name: xanthine-guanine phosphoribosyltransferase, Class: EC2.4.2.22
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gpt
Sequence:
1 MSTKDPHRLP HEKGFHISWD QIHRDSRALA WRLDGQGPDE GAWRAVVAIT RGGMAPAMIV
61 SRELDIRTVD TISVKSYHHQ AQGQAQVLKA PDAGLMGDGT GILVIDDLVD SGKTLELVRE
121 MYPNAHFATV YAKPKGRPMV DTFITEVSQD TWIFFPWDMA LQYVEPYRGT D
SEQDB ID: 3101377DGH
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPTRTATTF APPVMEARRW LEGVTFSPDR PLINVSQAAP VEPPPQALRQ AMADFALTED
61 SAHLYGPVLG NADLRAELAA QISHHYGGAV RPEQVAITSG CNQAFAATIS AITGEGDEVI
121 LPTPWYFNHK MWLDMEGVTA VPLATGPDLL PDVEAARALI TPRTRAIALV TPNNPGGVEY
181 PAELVGAFYD LAAEHGLRLL LDETYRDFDS RSGAPHDLFT RPDWDKTLVH LYSFSKAYRL
241 TGHRVGALAS DTGLLAEIEK FLDTVAICPG QIGQHAALWG MRNLGQWVAG ERDEILDRRA
301 AIAEGMPALV AEGWTLLGLG AYFAYLEHPF DLPSDELARR LVRDAGVLVL PGTMFMPEGD
361 LAGARQLRVA FANLDRAGIG QLFDRLKGLR F
SEQDB ID: 3101377DGJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAGVKSLSK TFVWILMGLL IAGLAGFGAV NLSGTVRTVA QVGEQTVSVD AYARELQREI
61 RGIEAQTGQP LQMSQVRDLG IDQAVLARLV AIAALDNEVA GLGISIGDEN LSREIVQIPA
121 FQGVDGKFDP EGYRYALDNA GLSEAEFEAD LRRESARTLV QGAIMEGLVM PDTYADTLAQ
181 FVGARRSFTM ATVDTGALDS PVAAPDAAQI EAFYADNQDQ FMLPRSKRLT YALLTPEMLL
241 DRVELDEGAV RRLYEERESS YQQPERRLVE RLVFADQASA ESAMAQVEVG GATFELLVEG
301 RGLSLTDVDM GDLTAQDLGA AAEAVFAAEV GDVVGPLPSD LGPALFRVNG TLDARITTFE
361 SVEAELRDEL AGERARRLIE AQAESLNDML AGGATLEELA QDTDMELGQI DWTEDSSDGV
421 AAYAGFRAVA TEVAEGDFPE IGFLEDGAVF ALRLDEELEP RPEPLDSARE RVIAAWTAAE
481 TRRALQDKAA SVATGLATDG DFTATGLPHR VENGLTRTAF IDGTPFDFME QVFAMQPGDL
541 KVIAGDDAAF IVRLEEELPP ADTDELTQMK RALSAQMTQA LAQNLFDIYV RDAQTRAQPT
601 LDQRALNAVQ ASFQ
SEQDB ID: 3101377DGK
Reference:
3101377
Name: anthranilate synthase, Subunit: component I, Class: EC4.1.3.27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpE
Sequence:
1 MALTPDFETF ARAYEAGENQ VVHTRLAADL DTPVSLMLKL TGAQKDAFML ESVTGGEVRG
61 RYSIIGMKPD LIWRCHGEQS ALNRKARFDP DGFRPQEGNP LDNLRALLAE SRIALPEDLP
121 QASAGLFGYL GYDMVRLVEH LPDVNPDPLG LPDAVMMRPS VVAVLDGVKG EVTVVSPAWV
181 SDGQSARAAY AQAAERVMDA VRDLERAMPA ETRDLGEAHE VAPPVSNFTR EGYKAAVEKA
241 KDYIRAGDIF QVVPAQRWTQ EFPLPPFALY RSLRRTNPSP FMFYFNFGGF QVVGASPEIL
301 VRVFGQEVTI RPIAGTRPRG ATPEEDRANE ADLLADKKEL AEHLMLLDLG RNDAGRVSKI
361 GTVRPTEKFI IERYSHVMHI VSNVVGELDP DKDALDAFFA GMPAGTVSGA PKVRAMEIID
421 ELEPEKRGIY GGGVGYFSAG GDMDMCIALR TAIVKDRKLY IQAGGGVVYD SDPEAEFMET
481 VHKSNAIRRA AADAARFIGS RNS
SEQDB ID: 3101377DGL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPLDPHALP PVPWKNGGGV TREIAGVPGR WRVSLAEVSA EGPFSLFPRQ MRILTVVHGS
61 GMELHTEEQV LKARSGAPLS FSGDLPVIGK LPNGPVHNLN LIFDPRQVSG ALAAHAGTRT
121 VPADPDEVSL YLLQGTARCE NVSLSAGQML LKRKMPLDLG LEAVALCVSI SRRS
SEQDB ID: 3101377DGM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGGFIGGLLA GAVLVLAAAA WLSLTTPLPQ RPEVAATPAA AEPSAEPAEQ GGIASPGRDA
61 DLVELAPRQP EAAPGAETLG ALDEADRQPA GKPQVGGATE TIARPEGSDS AAVQVPGTGS
121 GVTQLQLASP AAPQDRAEPE VNTEAPAQPS APETGVTAEV TAPSLPDSTP AVPETATDAQ
181 PAQESASVAE APATDTAPVP DTATAAPEAP QEEEKPRIAA LPQIGGAEEG AAPRVGTPVV
241 PLTERDSAVA EAPAEGGPRP IEAYAATFDN PEDKPLMSIV LIDDAEGLGS EALRDFPYPL
301 TFALDPADPQ AAEKMARHRA AGVEVMLIAD LPAAASAQDA EVSMAVWLKA LPETVGILEG
361 TGTGIQGNRA LSDQVTAIVG GSGRGLLTQD NGLNTVQKLA ARDGVPSAVV FRDFDGAGQS
421 PTVMRRFLDQ AAFRAGQEGA VVMLGRLRPD TISALLLWGL QDRASRVALA PVSAVLTRDP
481 G
SEQDB ID: 3101377DGN
Reference:
3101377
Name: anthranilate synthase, Subunit: component II, Class: EC4.1.3.27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpG
Sequence:
1 MLLLIDNYDS FTYNLVHYLG ELGAEIEVRR NDALNVQEAM AMNPAGILLS PGPCDPDQAG
61 ICLALTEAAA ETRTPLLGVC LGHQTIGQAF GGKVVRCHEI VHGKMGQMHH SAKGLFAGLP
121 SPFEATRYHS LVVERDSLPD CLEVTAWLED GTIMGLQHKE LPIHGVQFHP ESIASEHGHA
181 LLRNFLDVMK VPA
SEQDB ID: 3101377DGP
Reference:
3101377
Name: anthranilate phosphoribosyltransferase, Class: EC2.4.2.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpD
Sequence:
1 MSDALKPLIG AAADRPLTRA EAEQAFTILF DGEATPSQIG GLLMALRTRG ETVDEYAAAA
61 AVMRAKCNAV RAPEGAMDIV GTGGDGKNTL NISTATAFVV AGAGVVVAKH GNRNLSSKSG
121 TADLQGQMGI NVMVGPQVVE KALNEAGIGF MMAPMHHPAT AHVMPTRAEL GTRTIFNILG
181 PLTNPAGVKR QLTGAFTRAL IRPMAETLGL LGSERAWLVH GSDGTDELTI TGVSWVAALE
241 DGTVKEVELH PEDAGLPVHP FEAIIGGTPE ENATAFRALL DGAPSAYRDA VLLNAAAALV
301 VADRAADLRE GVALAAQSID SGQARAKVEA LSRITQDAR
SEQDB ID: 3101377DGQ
Reference:
3101377
Name: indole-3-glycerol phosphate synthase, Class: EC4.1.1.48
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpC
Sequence:
1 MTDTILDKIK AYKLEEVAAD KAAKPLEAVE AEAREADPVR GFADALIAAT RQGYGLIAEI
61 KKASPSKGLI RPDFDPPALA RAYAEGGATC LSVLTDTPSF QGAKSYLTAA RAACDLPALR
121 KDFMYDPYQV VEARALGADC ILIIMASVDD AQAEELEQTA FDWGMDVLIE VHDAEELERA
181 ERLKSPLIGI NNRNLKTFET TLDTTRKLSK LVPPDRIIVC ESGLNTPADL SDMARHGARC
241 FLIGESLMRQ DDVTGATRTL LADPLMPGAM
SEQDB ID: 3101377DGR
Reference:
3101377
Name: Mo cofactor biosynthesis protein, Isotype: C
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: moaC
Sequence:
1 MSLTHFDAKG DAHMVDVTDK AVTDRVAVAE GYISMTSQTF DIVSEGRAKK GDVLGVARLA
61 GIMGAKKTPD LIPLCHPLPL TKVAVELTLD PELPGVRIAA TVRTTGQTGV EMEALTAVST
121 AALTVYDMVK AVDKAMQIGG IRVTLKDGGK SGRYEAT
SEQDB ID: 3101377DGT
Reference:
3101377
Name: Mo cofactor biosynthesis protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: moaA
Sequence:
1 MITVEEARSL LLDLVEPLGA EEAPLAESAG RVLARDVAAT RDQPPFAAAS MDGYAVKSAE
61 VERHAMFKVI GEAAAGHRFD GQVGPGQAVR IFTGAPVPDG ADFVVIQEDV SRSGDLITIT
121 DAPGDKTNIR PAGVDFRIGQ TLSAPRVLRP EEVALLASMN IPRVPVRRQP VVALISTGDE
181 LVMPGETPGP DQIIASNTFG LKALFEANGA RVRVLPIARD TRAALVTAFE LARGADLVIT
241 IGGASVGDHD LVAQVAGELG MEQSFYKVRM RPGKPLMAGR IGGMPMVGLP GNPVSAMVCG
301 YIFILPMLRR MLDLDPEIAL REAVLSAPLG PNGPREHYMR AQVENGQIAT FGDQDSSLLS
361 ILAQANALLM RPPEDSARAI GERVRYLPI
SEQDB ID: 3101377DGU
Reference:
3101377
Name: LexA repressor, Class: EC3.4.21.88
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lexA
Sequence:
1 MLTKKQLDLL EFIHKRLQAD GVPPSFDEMK LALDLRSKSG IHRLITALEE RGFIRRLAHR
61 ARAIEIVKLP ESLGGEPTVG FQPRVIDGDR PDRPRPANAE PVTIHAVELP VMGRIAAGVP
121 IEAISQVSHQ VAVPGSMVGK GEHYALEVKG DSMIEAGIND GDVVVIRETS TADNGDIVVA
181 LVDDSEATLK RFFRRGASIA LEAANPAYET RVLPSDRVRV QGRLVGLIRT Y
SEQDB ID: 3101377DGV
Reference:
3101377
Name: competence protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVLPRIEAA LLAQRGHLFP WVPVFLALGI GFYFLLRVEP GLTHYALAAG FALLVGALAW
61 ARPGAFSPLG WALALIAAGF VLAGARAHQV AAPVIEGRYY GPVEGRVVAL DRSASDKLRV
121 TLDQVRLDRW MPTGPPRHVR ISLHGDERVP EPGSRIMTTA YLSPPQGPVE PGGFDFRRHA
181 WFQGLGAIGY TRVPVLLARP PDRSERDMSV FTLRMAASAH IRARLPGDVG GFAAAVTTGD
241 RSGVSQGALD ALRASNLAHL LAISGLHMGL LAGFVFTALR VALSLIPPLA LRLPVRKLAA
301 LGALAVAAGY LALSGGNVAT QRAFVMVAVM LCAVLVDRRA LSMRAVAMAA LIVLVLRPEA
361 LLGPGFQMSF AATVALVAVF GWLREAEIGL GPRWLNPVAG VVISSAVAGL ATAPIGAAHF
421 NTLAHYGLVA NLMSVPLMGL VVIPAAVLAL VLAPLGLDWI GLEVMGLGLR WILGVADWVA
481 GMDGARGYVM RPDWVVLPIL TLGALWLVLW RGRARLAGVP VMAAAFWLWS GAERPGVLIA
541 DTGGLVGVMT ETGRALSKPR GAGFIAGVWL ENDGDGADQM AAAARWPGED MLRKIRVGEV
601 EIVHVTGKRA AQGLSDCDRA QLIVSAVPLA VNGPCEVYDP KRLALTGALS IGPKGVESAA
661 HLSGRRLWNG AARPVQ
SEQDB ID: 3101377DGW
Reference:
3101377
Name: Glu-tRNA synthetase, Class: EC6.1.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltX-2
Sequence:
1 MPDQVVTRFA PSPTGFLHIG GARTALFNWL YARGRGGKFL LRIEDTDRAR STPEATAAIL
61 QGMAWLGLDH DGEVISQFER APRHAEVALE LLAQGKAYKC FSTQDEIQAF REAAQAEKRS
121 TLFRSPWRDA DPATHPDAPY VIRIKAPQSG ETVIRDQVQG DVTIRNDQLD DMVLLRSDGT
181 PVYMLAVVVD DHDMGVTHVI RGDDHLNNAA RQMMIYQAMG WEVPVWAHIP LIHGPDGKKL
241 SKRHGALGAQ EYQAMGYPAA GMRNYLARLG WSHGDDEFFT DAQAREWFDL DGIGKSPARF
301 DLKKLENLSG QHIAVSDDAA LRHEIEAYLA AAGLPALTQT QSGDLERAMY CLKDRARTFP
361 ELIEKAAFVL ASRPISPDEK AAAALASVSD GILAELTPQL QNASWTRESL EEALNAFAEA
421 HGTKFGKLAA PLRAALAGRA VTPSVFDMML VLGRDESLAR LRDAAHPA
SEQDB ID: 3101377DGX
Reference:
3101377
Name: citrate synthase, Isotype: I, Class: EC2.3.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltA
Sequence:
1 MTEEKKTATL SLNGQSYDLP VYSPSAGPDV IDIRKLYGQA GVFTYDPGFT STASCDSTIT
61 YIDGELGELL HRGYPIDQLA AKSHYLEVCY LLLYGELPTA AALEKFETTI TRHTMIHEQM
121 HYFFRGFRRD AHPMATMVGV VGAMSAFYHD STDIADPHQR EIASHRLIAK MPTIAAMAYK
181 YSIGQPFMYP RNDLDYAANF LQMCFAVPAE HYHVDPILAR AMDRIFTLHA DHEQNASTST
241 VRLASSSGAN PFACIAAGIA CLWGPAHGGA NQACLEMLKE IGSPDRIPEF IARAKDKNDP
301 FRLMGFGHRV YKNFDPRATV MKQSADEVLD LLGVENNPIL ATAKELERAA LADDYFAEKK
361 LFPNVDFYSG IILEAMGFPT SMFTPIFAVS RTVGWVSQWK EQLADPQHKI GRPRQLYLGS
421 TARDYVDIED R
SEQDB ID: 3101377DGY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGTIGEKTE ITVTLGCEPR LLVTIVEKPD GGLFIDIKSE DPSAEVGDLD GFFFNFNDDA
61 TLDGLNIWPA ENEGTQWSPV TDVQMNPDAV DSLSNGAQLA ESYDAGIQFG TTADSTEGYV
121 SAANFTMWSE NGPLSISDID LDSLAAVVDS DTGNGIVKTV SDSTGETEDP DGEHDEDECA
181 FVIEGPVNTE VVLTQLENGD IRVDLEVLEG DDPDATGQIG DITGLFFNVG DDSLLDGMTV
241 SGEDVTGSQF AAGSVNDLGN GANMEGAQEG ETGETANGFD AGIAIGKNGI GHGDDIRATS
301 FTLSHPDGLS LEDFSGEYFG LRLTSVGDED SDDREGSLKL IGQCEDEPQP PICDDQYYLN
361 DVMALMTQPM HDELAYEMMA SDPVEEVDLV ETY
SEQDB ID: 3101377DH
Reference:
3101377
Name: nicotinate phosphoribosyltransferase, Class: EC2.4.2.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pncB
Sequence:
1 MAVRLAYPWV IHSERGPSVD IATRVYNHKW KIDPIVRSLI DTDFYKLLMC QSVFRNKPDT
61 QVTFSLINRT MRIPLARIID EGELREQLDH IRSLRLSRGE STWLRGNTFY GKRQMFRPDF
121 MEWFEGLQLP PYHLERRDDQ YELTFEGNWP EVMLWEIPAL AVLMELRSRA VLHDMRRFEL
181 QVLYARAMTR VWEKIERLRG IDGLTIADFG TRRRHSFLWQ DWCVQAMIEG LGAKFTGTSN
241 CLIAMRREVE AIGTNAHELP MVYSALAETD TELARAPYDV LSDWHEEHDG NLRIILPDTY
301 GTKGFLDRAP DWLAGWTGIR IDSGDPAEGA ETAISWWKDR GENPTDKRII FSDGLDVDKI
361 AELHARFSGR AKISFGWGTL LTNDFRGLVP DDGLAPFSLV CKAVSANGHP TVKLSDNPEK
421 AMGPADEVAR YKRVFGVGRQ TSYAVEV
SEQDB ID: 3101377DHA
Reference:
3101377
Name: radical SAM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHITAAKAR AGGQIGGVFC LAQCSLNVLV SGMQTQPLPP LISARPVGRG ARSNDAGRFE
61 PLERVAEHDG WEREEELPPL RTQVSLETAR SLISYNRSPD LPFDRSINPY RGCEHGCSYC
121 FARPSHAYLG LSPGLDFETR LVARPNAAEV LRAELSARRY KVAPIAIGTN TDPYQPLEKT
181 HAITRACLQV LAEFNHPVAI VTRGALIERD LDILAPMAAR GLVRVGISLT TLDAALARRM
241 EPRAPSPKRR LAMIRALNGA GVPVRVMTSP LIPGLTDHEL ESLLAAGAEA GADTASWIML
301 RLPREVSPLW QEWLAEHAPA RAAKVMARLR EMHGGRDYDP RWGHRMRGEG EYAQMIAKRF
361 RAACKRIGLA QEAPALRCDL FRVPPQPGDQ LSLF
SEQDB ID: 3101377DHB
Reference:
3101377
Name: corrinoid methyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEEEDIILS ELDDEELVQQ MFDDLYDGLK EEIEEGVNIL IERGWVPYDV LTKALVGGMT
61 IVGADFRDGI LFVPEVLLAA NAMKGGMAIL KPLLAETGAP RVGKMVIGTV KGDIHDIGKN
121 LVSMMMEGAG FEVVDLGINN PVENYLEALE KEEPDILGMS ALLTTTMPYM KVVIDTLIEQ
181 GKRDDYIVLV GGAPLNEEFG KAIGADAYCR DAAVAVETAK DWVGRKHNRM AG
SEQDB ID: 3101377DHC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTTFTALFL GNLADIDTFE GNNSAESAGA LVGLTFGSIA DPLVDSAVTW SAVGDPGSFF
61 DMDNNPAEQF SIDGGPAQTF DGTAVYDATI TYTDGSTATI TAVLAQDVNG NTYLVPEFSA
121 NADQAALEAG IIQSLTLDAV TGGGANYSGL TANRQDWQLV TCFTPGTIID TEDGPRLIEE
181 LQPGDLIRTL DHGDQPLRWI GRTTVRATGA FAPVLIRAGA LDNRRDLIVS PQHRMLIEGW
241 RAELITGHSQ ALVAAKHLVN ARDILIAPGG EVTYIHLLFD RHEIIWAEGC PTESFHPGQM
301 GWSGLEQAAR DEILSLFPEL ATTGMQSFGP LARPAIRQHE ALLSVT
SEQDB ID: 3101377DHD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMLPDDAQL TRSGLSLSSG DARILLIACG ALAREILALR DRNGWTHMDL TCLPAILHVY
61 PERITAAVEE AVARHRDSYQ RIFVVYADCG TGGLLEAACE RLGVEMVKGP HCYSFFEGNA
121 RFAEVSEDEI TAFYLTDFLV RQFDAFVWKP MGFDRHPDLI PMMFGNYTKL VYQAQTDDPA
181 LTEKARTCAE RLGLAFERRF TGYGDLETTM AGWADKATRG
SEQDB ID: 3101377DHE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTLYYSPHT RSSRVIAQLM LIGKLDQVEV VTVDVVRHDG SGRHDPSNPH PEGKVPYLVT
61 DDGTGIRESA AIMMYLDELF GQPLSPAIGA PGRGAYLSWM AYSGGVLEPV LVAAFAGLDH
121 PAIIETFRGM GELSAVLEQG AQKGPFLLGA ELSVADILLA SPFQWAPHLL PDSPAIKAWV
181 DRVDSRLDGA AIAAYEASAM AQLTAQETA
SEQDB ID: 3101377DHF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKTDRLFRL LHLIRGLRPP VTAARLASAM EVSERTIYRD IDSLRAAGAR IEGEAGVGYT
61 MVEDPALPPQ TFTRIEIEAL TLGLADVTQR GDADLARAAS DALVKILATL PERQQRQAMH
121 AVNMAQRLIT PATPTIDMTL LREAMWAEEA LDIGYRDLKQ ERTRRRIYPL ALSYHDRSVM
181 LLAWCCKRQD FRSFHVTRIE GYEKTQQSFR PRRVTLLRDY VEKLRARDQA CLDGLA
SEQDB ID: 3101377DHG
Reference:
3101377
Name: Fe-S metabolism-associated family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASPAFEEIV EDFEFLDDWE DRYRHVIEQG KLMDPLDEAL KVPATRVHGC ASQVWLHPVI
61 EGGVFRFDGD SDAMIVRGLI AVLRALYNGV PVAEVARIDA RAELARLGLN DHLSAQRSNG
121 LRAMIERIRM VAAEAA
SEQDB ID: 3101377DHH
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKPLIALVT AGSVLTACGG WRDSRVNPSN WFGPSTPAPI EATAGEETNP LIPRNSGKGL
61 FARPDPEDRS ILITQVTELK VEPTTTGAII SVVGVANRQG GFDTELRPIV TPENTEAGIL
121 AYGFRVVYPE DATPQGPVQT RTIREAVSVS RQDLAGIKVI RVEAKDGALE TRRR
SEQDB ID: 3101377DHJ
Reference:
3101377
Name: RNase, Isotype: D, Class: EC3.1.26.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rnd
Sequence:
1 MKTLTTTPEL AAFCKAAASH AYVTVDTEFL RERTYYSKLC LIQLAYPGED ADSAVLVDPL
61 AEGLELEPLY TLFRDTSVVK VFHAARQDLE IFWVDAGVFP EPLFDTQVAA MVCGFGEQVG
121 YETLVRKICR QGLDKTSRFT DWSRRPLSDA QKTYALADVT HLRQIYEHLA ADLAKTGRSH
181 WVAEELRTLT DPATYDIRPE EAWRRIKTRT NSGKFLAVVR ELAQFRESYA QDNNVPRNRV
241 FKDDALIELA STKPRTHADL GGSRLLLREA RKGAIADGIL AAVGRGIDCP PEKMPKATNG
301 RENLQVNPAL ADLLRVLLKA KTETVGVAAK LIANSAELDL IAAGERDVPS LTGWRLEVFG
361 ADALRLCQGE IGLAAKGQNV EVVTL
SEQDB ID: 3101377DHK
Reference:
3101377
Name: phosphoribosylglycinamide formyltransferase, Class: EC2.1.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purN
Sequence:
1 MSAKRVAILI SGSGSNMVTL VDSMTGDHPA RPCLVLSNDA NAGGLAKAAA RGVPTAVVDH
61 RPYGKNRAAF EAELVKPILE AGADIVCLAG FMRVLTAGFT DRFQGRMLNI HPSLLPKYKG
121 LHTHARALAA GDTEHGCTVH EVTSELDDGP ILGQARVAVE PGDTPETLAA RVLTWEHKLY
181 PAVLRRFAGG DRRPVWLP
SEQDB ID: 3101377DHL
Reference:
3101377
Name: phosphoribosylformylglycinamidine cyclo-ligase, Class: EC6.3.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purM
Sequence:
1 MTSGKNGITY AEAGVDIDAG NALVDRIKPA AKRTNRPGVA SGLGGFGALF DLKAAGYQDP
61 VLVAATDGVG TKLRIAIDTG LVDGVGIDLV AMCVNDLVCQ GAEPLFFLDY FATGKLETDT
121 AARIIEGIAE GCVQSGCALI GGETAEMPGM YPAGDFDLAG FAVGAMERGT ALPEGVVEGD
181 VLLGLASNGV HSNGYSLVRK LVEISGNTWE SDCPFGDGKL GQALLTPTRL YVRQVLAAIR
241 AGGVHALAHI TGGGLTENLP RVLPEGMGAT IDLDTWDLPP VFGWMAETGG IAEAEMLKTF
301 NCGIGMIVVC AADRAEALAE LLSAEGETVA RIGTVTTTPG IAYTGKLL
SEQDB ID: 3101377DHM
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEFLMTINRR AFLSTLAAAP VLSLGGGAVA RAEVTEAGEI THGFALGDAR VTVLLDGHLP
61 VGTQLINGYD EARAQQVLAQ GLHRMQDNAL TIPVNGYLVE RGGRRVLIDT GTAQLMGPGL
121 GALHAGLAAA GVAPETIDTI LLTHMHPDHA GGLLAADGTA AFANAELVVA QREWDFWHDD
181 AILASVPEGS RGFFDIARRA VAPYADRLRL LAGEGEAAPG FAALDLPGHT PGHTGFMLDA
241 GGEGLLFWGD LIHSTALQFA EPGWTIAFDA DTAQTVTTRR RMLDRAVADN LLVTGAHLDF
301 PALGRVLRQG AAYAWQPAPW QFGL
SEQDB ID: 3101377DHN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRLTLLETF AIALDEGSLN RAARRRGITQ SAVSQQIKQL ETSIGQQLLH RTARGIHATR
61 AGDLVYVHAQ TLLSGYNRMT AELDQLENSV SGTFRISVSS FLGRSVIGPM LIEMNAAHPD
121 LNIVMRLEDR LVDVVREGYD LAIRTGRLGD TDGFGRKISA LDTVLVATPA YLDRVGRPAQ
181 PEDMKRLDFI QHHEDQTKGF FPLRRDGREY PAPVRVGFTA DDPDLIMRAV ASGSGYTRVP
241 RFMVADEIAS GALEVVLPAY RPPNKDVFAV YPSRHTPDRR RDLTIENVVA RFEALRDPQA
301 GPDAITA
SEQDB ID: 3101377DHP
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFRWLKHYM PRSLYARAAI IIVVPVIAVQ IVVSVVFLQR HLEDVTTQMT LTAVREVELI
61 MGELTEPATQ GEVQAQLRPV LGALQVSLRF VNDGTVPMAD LRPWYDYTGR QVQRILRGRL
121 ADVLAVELPD SRMVRLYLGS ALGPVELIFD RRRMSPAAPH QLIVTMVAFG LLMTAIAFLY
181 MRNQLRPVKR LADAAQAFGR GHMVSYTPSG AIEVRAAGSA FLDMRARIER QIEQRTLMLS
241 GVSHDLRTPL TRLKLGLAMI DEEDAAPMLQ DVAEMQQMLD AFLDFSRGVS ESAPEKVDPV
301 ALLKQVVEDA RRADRDVALV ACEAEEGDIV TLRPMAVRRA VENLIANAVR YGSRAEVSLA
361 VTPKFLRIRV EDDGPGIPAD KRAEAVKPFQ RLDAARNQNQ GGGVGLGLAI VADIARAHGG
421 ALRLGDSERM GGLCADIVIG R
SEQDB ID: 3101377DHQ
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQAPDDFDP PIGTPIELEA GIRRIVAPNP SPMTYRGTNT YLLGTRELAV IDPGPMSEAH
61 LEAILAALGP GESISHIVVT HTHLDHSPLA RPLAERTGAP VLAFGGPEAG RSAVMRALSA
121 QGLAGGGEGI DTGFVPDRTV SDGERIEGDG WQLEVIHTPG HLGNHIALAW QDVCFTADHV
181 MGWASSLVSP PDGDLTDFMT ACRDLRARDW RLFHPGHGAQ VSAPGARLDW LITHRMGREA
241 AILGALADGP ATAEALARRI YTETPAALLP AATRNVFAHL VDLTGRSRVA PEQTLSATAR
301 FHRLS
SEQDB ID: 3101377DHR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARWPVQHGP DMQQPKPEPI SAPPRQQLSQ LRDIAILLAL AVLALYAGAG FLIPLALAFL
61 VYVLVTAISD RVHAATGAPE WLTTLAGIIV VLAGLFLMIA VIGGQATQFA RAMASYENAF
121 DQAVTRVAAL LGEQITAFLR DNLIGIDLSA LTRSAMGSAT SLLNTFLLVS LYVAFLLVER
181 RVLGIKLLLA ARDPQLGRDM SQVMEAISHN LQSYLGVKTF VSLLTAGISY VVFTLLGLEF
241 AETWAVLTFA LNFIPSIGSI VAVIFPALVS LVQFDTITPF LVIVFFCGTV QFLIGNFLDP
301 ALLGRSLNMS TFMVILALTF WTAVWGLIGA FLSVPLTVCL LIVFRHVPAL RPVAVLMSKD
361 GHPEAQDSDA
SEQDB ID: 3101377DHT
Reference:
3101377
Name: acetoin utilization protein, Isotype: AcuC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acuC
Sequence:
1 MFIGSEIYRR STYGAVHPLA IPRVSTVIDL CRAMGWFAPG QYRTSPRARP AALRAFHTPD
61 YIAALQQAEA EQAVSEETRA RHGLGTLPNP VFAEMYRRPA TAAGGSLLAA ELVARGHRVF
121 NPGGGTHHGF ADRAGGFCYL NDPVLAILAL QRLGCARVAY VDIDAHHCDG VASAFQGSQT
181 VRMISIHEAR RWPFTGALED DAGGAALNLP VARDLNDSAY ALILDRLILP AVAGFRPDAV
241 VLQCGADAVA EDPLSRLALS NCAHRDTVRA LAALCPRLLV LGGGGYNPWS VARAWTGVWA
301 TLSGAEIPDR LPPEAEAVLR ALSWQRQRHA PRPETWFTTL ADAPRPGPIP SGLRTDLARL
361 EQRLRAEV
SEQDB ID: 3101377DHU
Reference:
3101377
Name: cardiolipin synthase, Class: EC2.7.8.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWAALLSLIV FCLYGAAIVC AVQAARTART PQGAVGWVVF LLTLPWASVP LYMFLGHHRF
61 HGYRIARRES ERVVAGLRAH ADATAPDPDR VMVNTRPFEK IAHMAVSRGN GARLLVDGEA
121 TFAALFAALD AARHYVLIQF YIVRDDDLGL ELRDRLIAAA QRGVKVRFLT DAIGSYGLSD
181 NYIEDLRAAG IDIANPRKQR GPNTRFQVNY RNHRKTVVVD GQTGFIGGHN VGVEYLGQDP
241 VMGRWRDTHV QITGPSVLQL QLVFAEDWHW ARGEDLLDLL SWETRLDPQD ADALIVATGP
301 GDRTESGAMM FFAAITAAER RCWIASPYFV PDLDILAALK HAALRGVDVR LLVPDEADHT
361 IPWLAAFAYF DEVREAGVRV MRYTDGFLHQ KVFVVDDTIA AVGTTNLDNR SFRLNFEAMA
421 LFFDATVAGQ VTAMLEHDFA SSTELTRSLA AQPVFIRYGA PLARLFAPIL
SEQDB ID: 3101377DHV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLLQQIMWG SLYLGLCFVV EVLLLVWCTL VIVHLSIRLR HLSRAMRTAA VISVSLAFIV
61 LAHTLQVWLW AGVWIWSDVL TDWNEALYFS LVTYTTLGYG DIVLGPGLRI FAAFAAVAGL
121 LAFGLSTAYL VALMSRVFEG RLPR
SEQDB ID: 3101377DHW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRLSILLIA LSAAPALAQD RAALCHERAQ KQAGIRDTEW SQGRTTLRIG GSVGVGVSRS
61 SGPATQGAPA YAGSAASERF EEKRRKKIYT RTYNDCMAQT R
SEQDB ID: 3101377DHX
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGIRRGNCNR CPAANGGNRG LGLDSGGGRA ILCPVTAPIT ALRPRAMLLT VDTVSKTYPG
61 GRPVLRGASI TLDRGQSLAL TGESGSGKST LLNLTGALDG FDSGEITLDG VALSQLDDAG
121 RAALRRDRVA LVFQQFNLIP ALSVAQNLAF QARLAGRLDR GWIDEITARL GLTELTGRYP
181 EQLSGGQQQR VAIGRAMAGR PKLLLADEPT GNLDETAAGT VLDLMLELVR DSGTALLLVT
241 HSQAIAARLD RRAHLTGGRV AA
SEQDB ID: 3101377DHY
Reference:
3101377
Name: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGAALLALG SHWRRHPVQL VTLLLGVALA TGLWSAVQAI NAEARASYAR AADQIGAGGL
61 DRLRRVDGAA MGLEQYLVLR RAGWQVAAVL EGEMRLGLRA IAVTGIDLLA YPDLPAIAES
121 AAAAEIAPVE ALTAPGRLFA APALALALQG EPGLPPVVET SALPPDTVLT DIGTAETLLD
181 RPGQISHLLV LPGQPLRRAP LAEIAPELIR QPASGAQDIG RLTVSFHLNL TAFGLLSFVV
241 GLFIVHGAVG LAFEQRRGLI RTLRALGLPL RLLTRLLLAE LCLLALLGGA AGLVLGYVVA
301 AALLPDVAAT LRGLYGAPVS GVLELRPVWL LSGLGMAVAG TLLASAQALW RLARLPILAA
361 PGQRAWGSGR LRAPTQLLLA LALLLTGLAG FAVSGGLIGG FVLLGAVLMA AALALPPVLS
421 ALLALGGARA RGPVAEWLWS DMRAQLPGLS LALMALLLAL AANIGVGTMV ASFRLTFDGW
481 LDQRLTSTLY VTARDDAQGA ALADWLEPRS DAVLPIRSVE VQQAGTPLFI YGIVDHPSYR
541 AHWPLIARSP QDWDRVMRGE AALINEQMAR RDGLWPGDRV ELAPGWTLPV AAVYSDYGNP
601 TGQAIVALKQ LLQRYPGTPD TRFGVHLASE RADALADEIA TTFDLPAGAV IHQEALKARS
661 RAIFEKTFLV TGALNILTLG VAGFAILTSL LTLWTQRLPQ LAPVWALGLT RARLARLELA
721 RAVALAAMTA LLALPLGLVL AWLLLAVINV AAFGWRLPMY LFPLDWLRLI GLALATGALA
781 AALPALRLYR LPPAQLLRVF ANER
SEQDB ID: 3101377DJ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNARSGDNVV LAILLSLLAL VLFDMMGLII KYLSPRYGAA ELSAYRNFFG VFPSVIALWS
61 SPGWHRAGRP WRIRQWRLGL MRGVYVTFAQ FLFYYSLGKL AFATASTITY ANAVFMTALA
121 VPLLGERVGL MRWAAVLLGF AGVLLVMKPG SDSFTPDALA PLGAAFLYAL TGVSARQMDS
181 AVPSALINLY SVVAALVGAL ALALLSGGFT PLAQWSDLGW IAAMGGFGGT AVLCLVASYR
241 MTEQSNLAPF SYFGIPIAFV AGWLVFDETP WADLFPGAFF IAGGGLMIVW RERIRSRAGR
301 RISN
SEQDB ID: 3101377DJA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMNVRLLVL LLLWPWTALA QGFAGLGTEA DGFAVPERGH SPAFPTDHGP HPEFRIEWWY
61 LTATLTGADG RDYGLQWTLF RSALKPGEAP GWNSPQLWMG HAAVTTPDSH LFAERLSRGG
121 IGQAGAVAAP FRAWIDEWEM AGDMGGDMVL RAGGSDFAYH LTMRAKGPLV LHGEGGYSVK
181 SAAGQASYYY SQPFLQVTGN LTLPEGEMSV TGQAWIDREW SSQPLAEDQS GWDWFSLVLD
241 DGSRVMAFRL RGSSDFTSGT WIGADGQATA LPDGSIQAEP LASAPSGAGP EVPVRWRLAI
301 PARGLDVTVE ALNPQAWMGT SFAYWEGPVR VSGSHAGRGY LEMTGYGAE
SEQDB ID: 3101377DJB
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDIRADLGE APILANEDEI IADIIQANLK MMEVEENGFK WRAQHPKGHG AIPARFIVGP
61 DVPQAFRVGL FAQPGAYDAL IRFSNGTERR DDPKGGDAHG MAIKLFGVPG ARVEGAADAK
121 GTLDFVLVDN ETFFEGDLNE YSAFNDLVSE VLNFKRNGDE ALAAIVNGIY LKFLKKYFSH
181 DIYAVAQKFG DQLPTSPLRA IYWSTTPFLH GDIAVKHRAV PDPVPAPGEL REGVEGADGL
241 TDQLLDGLNG KAAAFDFYIQ PQEDVAAHPI EDPNVNWTEN GAGWVKLARI EIPALDPGDA
301 AARAARIAAG DRMAFNPWNT LPEHRPLGAV NRVRNKVYKE LARARNAEGV
SEQDB ID: 3101377DJC
Reference:
3101377
Name: universal stress protein family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSSVLCAVD ISNPDSDAPI LKQAARLADL DGARLDVVTV LPDFGETWVS GFFEAGHHDK
61 AVKAAHDKLV ALCAQVLGAE RNADIRHVVA TGTAYKEILK TAQGAGSDLI VVGAHKPDLA
121 DYLLGPNAAR VVRHAPVSVY VVRAG
SEQDB ID: 3101377DJD
Reference:
3101377
Name: TRAP transporter, Isotype: 4TM/12TM fusion protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSEIQGNRP LSEEELQDLV ASSDAGARDP AGSIGLFLAI VAVIWSVFQL ILASPLSNML
61 LPGSIVNNSR QVHLAFALFL AFAAYPALKS SPRDRIPAQD WVMAVLGAGI ALYGYFFYDK
121 LVNSGGLADD TDKWVALVGL ILLFEAARRA LGPAMAIIAT IFLAYVFWGA SEWVPEVIRW
181 KGASLKKAMS HMWITSEGVF GIALGVSTKF VFLFVLFGAL LDKAGAGNYF IKMAFGALGH
241 LRGGPAKAAV VGSAATGLIS GSSIANVVTT GTFTIPLMKR VGFTSEQAGS VEVASSVNGQ
301 IMPPVMGAAA FLMVEYVGIS YVEVITHAFL PAAISYIALI YIVHLEAVKR NMPTLGNREV
361 HLIRTVAGML SFFLIFAGLC YATQFPAQAI AAWAPSSAGL IMGLIVTAIY IVLVRLAAQV
421 PDLEPDDPNA EVVELPDIAQ IYKAGLHYLL PIVVLVYFLM IEQKSPGLSA FWATALLFVI
481 LLTQKPLKSL FRGESEMATS FMSGVADLWQ GLIDGARNMI GIALATGTAG VIVGTVTLTG
541 VGQVMADLVE FLSGGNLVLM LVMVGLLSLV LGMGLPTTAN YIVVSSLMAG VVVQLGAQSG
601 LIVPLIAVHL FVFYFGIMAD VTPPVGLASF AAAAVSGGDA IKTGFTAFFY SLRTVALPFV
661 FIFNTDMLLI DVGWVGGILV AISATIAVLV FTAGTMGFFL TRSRIYESVA LILVAFVLFR
721 PDYVMNRIAP PFELFEPARL EQAVGDAAPG DVLRVIVSGP DFDSGEMKDL SLELTVGDES
781 DGAARVEAMG FLTLEEDGLI KLEEPLFGTP IAESLQDFDF YADEAVRIVT VKAPANQPPK
841 ELVFIPALLL LGLVAFLQRG RAARQGVPA
SEQDB ID: 3101377DJE
Reference:
3101377
Name: TRAP transporter solute receptor, Isotype: TAXI family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAQKSNGSF NMNRNSKLGL GALVTAAFLA PAAMAEEFIT IGTGGVTGVY YPTGGAVCRL
61 VNKGRKEHGV RCSVESTGGS VYNINTIREG ELEFGVAQSD WQYHAYNGTS KFEEAGKFEN
121 LRAVFSIHPE PFTVVARADA GITSFDDLKG KRVNIGNPGS GQRGTMDVVL EAKGWTTGDF
181 ALASELKAAE QSAALCDNQI DAMIYTVGHP SGSIQEATTA CDSVLVNVDG EAIDKLVADN
241 SFYRKATIPG GMYRGNDGDT TTFGVGATLV TSADVSEDAV YALVKAVFDN FEDFKKLHPA
301 FANLTEAEMI KDGLSAPLHS GAEKYYRERG WIN
SEQDB ID: 3101377DJF
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIRRARQED IDALMAIRAG VRENRLSDPA RVGRADYQEF LTLSTLWLCE IGGEVAGFAA
61 SDPRDGSIWA LFVAPGHEGA GCGRALLARA CADLRLAGWS EAWLTTEAGT RAERFYRRNG
121 WLPQGVTADG DRVFRRALT
SEQDB ID: 3101377DJG
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQTLDDADL TILRSLQEDC RLGLEELAHR CALSVPSVQR RLKRLRADGL IEKEIAVLDP
61 AGFEWKMTFV VMVELDRETL QQLDLFRKRA KAEPQVQQCY YVTGEADFIL ICTARDMQDF
121 EALTHRLFFE NSNVRRFRTS VSMERTKVSL SLPI
SEQDB ID: 3101377DJH
Reference:
3101377
Name: His utilization repressor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutC
Sequence:
1 MGEDTRVSYQ DIKARVLAAI RDNTWPPGAM LPGEVALAQE YGCARATVNR AMRELAEEGI
61 LERKRKAGTR VKLAPARQAR FSIPVVREEI EALGASYRYA LVSRSEEATP KWLAAQLGLG
121 AGDRVLHLVC MHYADERPFQ LEQRWINLAT VPQAAKKDFS QTGPNEWLVS EVPFTDIRLS
181 FSACRGNRET AEFLGGNETD AHFTVERVTW LGERPVTYAR LLFHAGYRMT TTL
SEQDB ID: 3101377DJJ
Reference:
3101377
Name: imidazolonepropionase, Class: EC3.5.2.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutI
Sequence:
1 MTPVGTEAVP SFFMTGHKKL LLIHFREKSL PGPDMTLALF HNLTLASMTD GPTPYGLMPK
61 GALVAEAGQV LWSGPQAELP AAFAAVPAHD LGRRLVTPAL IDCHTHVVHG GNRANEFEMR
121 LNGASYEEVA RAGGGIVSTV SATRTATEAE LLASALPRVD AMIAEGVAVI EVKSGYGLDI
181 ETELRMLRAA RAIGQHRDVT IRTSFLGAHA VPADFAGRAD AYIDTVAIPA LRTAHAEGLV
241 DAVDGFCEGI AFQPEQIARV FDVARDLGLP MKLHAEQLSN LGGTKLAASY GALSADHIEY
301 LDEDGVAAMA RAGMTAVILP GAFYTLRETQ KPPVALLRKH RVPMAVSTDA NPGSSPMTSL
361 LLAMNMACTL FRLTPEEALA GTTRNAARAL GMADRGTLAP GQRADLAVWD VAHPAELAYR
421 IGFNPLYKRI IGGTL
SEQDB ID: 3101377DJK
Reference:
3101377
Name: His ammonia-lyase, Class: EC4.3.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutH
Sequence:
1 MTALTLTPGS ATLEHLARIY FDESPVRLDP ACRPAVEAAA ARIRAAAAGD VPVYGVNTGF
61 GKLASLKVAP QDTATLQRNL ILSHCCGVGA PIPRRMARLM MVLKLLSLGR GASGVRWELI
121 TLLQEMLARD VTPVIPVQGS VGASGDLAPL AHMTAVIIGA GEAEYQGQRL PGAEALARAG
181 LTPIALGPKE GLAFINGTQF STAFALAGLF GAWRAATSSL VTAALSTDAI MGSTAPLQPE
241 IHALRGHRGQ IDAAARMRAL LDGSEIRESH REGDTRVQDP YCIRCQPQVT GAAMDVLRQA
301 AQTLEIEANA ATDNPLVLAE ADMIVSGGNF HAEPVGFAAD LIALALSEIG AIAQRRVALM
361 VDPTLSFDLP PFLTPKPGLN SGLMIAEVTT AALMSENKHL ANPCVTDSTP TSANQEDHVS
421 MAAHGAVRLG RMVENLHYIL GVELLCAAQG IEFRAPLQTS TALQAAVARL RAEVPRLEED
481 RYMAPEIETA ARLVGAGALL DVVGIDMGGL RP
SEQDB ID: 3101377DJL
Reference:
3101377
Name: For-Glu amidohydrolase, Class: EC3.5.1.68
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutG
Sequence:
1 MTPVAVIRGD SPVVLGMPHG GTFVPDAIHA RLNPRGQGLS DTDWHIDRLY ADLLPGASVV
61 KSTVHRYVID ANRDPAGASL YPGQNTTTLC PTTDFDGHDI WLPGQAPSDD EIAERRATYH
121 APYHAALAEA LERARDRHGV AVLYDCHSIR SDIPFLFAGT LPIFNIGTNN GTTCAPEIAA
181 ATLETCRAAD PDQTVLNGRF KGGWTTRHYG RPEIGQHAIQ METAQRAYMD EAAPWTYRPE
241 RADRLRPVLA ELLTQLKTLA LSGRLSSPRG A
SEQDB ID: 3101377DJM
Reference:
3101377
Name: urocanate hydratase, Class: EC4.2.1.49
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutU
Sequence:
1 MLDRKNTRDI YPPTGPERTA KSWQTEAAMR MLMNNLHPDV AENPHELVVY GGIGRAARTW
61 SDFDTIVATL KDLEADETLV VQSGKPVAVV RTHADAPRVL IANSNLVPHW ANWDHFNALD
121 KKGLMMYGQM TAGSWIYIGT QGIVQGTYET FAEAGRQHYG GDLTGKWILT GGLGGMGGAQ
181 PLAAVFAGAC CLAVECNPDS IDFRLRTRYL DEKAETLDEA LAMIDRWTKA GEAKSVGLLG
241 NAAEIFPEIY ARMQAGGLRP DIVTDQTSAH DPINGYLPLG WTMAEWKDKR ESDPKAVEKA
301 ARASMKQHVA AMVDFWNAGV PTLDYGNNIR QVAQDEGLEN AFAFPGFVPA YIRPLFCKGI
361 GPFRWCALSG DPEDIHKTDA KMKELFPDNT HLHNWLDMAQ ERIAFQGLPA RICWIGLGDR
421 HKAGLAFNEM VASGELKAPV VIGRDHLDSG SVASPNRETE AMRDGSDAVS DWPLLNALVN
481 TASGATWVSL HHGGGVGMGF SQHAGMVVVA DGTPEAARRL ERVLWNDPAS GVWRHADAGY
541 ETAVDCARAH GLRLPGILGN
SEQDB ID: 3101377DJN
Reference:
3101377
Name: formiminoglutamate deiminase, Class: EC3.5.3.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hutF
Sequence:
1 MTVFANRLLG PKGWLLNARV TIDGLFIASV EPDSAPLPGD VRVDTLLPAP GNLHSHSFQR
61 AMAGMTEYRS RGRESFWTWR ELMYRFLDRL TPEHVAAIAA QTFVEMQKAG YAAVGEFHYL
121 HHRPGGGHYD DRAEMSARIV QAAAETGIGL TLLPVLYTHG GADGRALAGG QLRFGNDLDA
181 YCTLVEGARA HTRTLAADAR VGIAPHSLRA VSATDLAEVA ARHPDGPVHI HIAEQTREVE
241 EIEAAYGARP VDWLLNNAAV GPRWCLIHAT HMSDAETRAM ASTGAVAGLC PITEANLGDG
301 IFNGVPYLEA GGAFGVGSDS NVLISLTEEL RLLEYSQRLR DRERNVLAGA EGSTGAALYL
361 GALRGGARAL DRRAGEIAPG ALADLVAIDS NAPALCALEP EQLLDGLIFA AGERVVSDLW
421 SAGRHQVRAG RHVAEESIAR RYGAALRDLL ARV
SEQDB ID: 3101377DJP
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDFAARLTHL RHDLHRHPEL GLAETRTKAV VAALLRDLGI EVHEGAGVVG VLRAGTGNRA
61 IGLRADMDAL PITETATHDH VSTTPGVMHA CGHDGHMTML LGAAEELARA ADFDGTVVFL
121 FQPAEEHGLG ARAMIDEGVL ERFPIDEVYA IHNLPGAPLG HVSTRPGLIC NSETLFQINI
181 TGQGGHASMP QAGVDAITVG AEMVTALQTV VARKLAPASG AVISVTEFLT DGQRNVLPGH
241 ATLKGDFRAR APQDRAEIQR FMEQIARGVA AAHGVRVAVT FDTQFVETMN APEPVQAVCR
301 AARAAGLEAE GNREPMSFSE DFAHFTAAVP GCFLLMGNGT EGAHAQPLHA SDYDFNDALL
361 PIGAAFWAAL VRDRLPQRKD
SEQDB ID: 3101377DJQ
Reference:
3101377
Name: diaminopropionate ammonia-lyase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDLLPAAQL GHVACAPTRG DAAHRVLSQQ DFDAAEAEIT QWEGYAPTPL VSLPALAEAI
61 GVGAILYKHE GPRFGLGSFK ALGGAYAALG VLQREIARRT GAQVELADIR AGKHRDAVAG
121 ITLVSATDGN HGRSLAWGCQ RFGAPCRIYI HAEVSEGRAQ AMRDLGAEVI RIDGDYDASV
181 RMAKDEAEAH GWFVVSDTSW PGYSDPPRDV MAGYGVMVRE VCREMDRAPT HVFLQGGVGG
241 LAAGVTAALV QHWGEASPRV VVVEPDRAAC LYESARAGAA TAVEIAEETI MAGLSCGEPS
301 PLAWAILAEE ARDYLTIPDT LVAPTVRLLA HPLGGDPVVE AGESAVAGLA ALIAACSDAA
361 LSDSLGLDRS ARVLLIGSEG ITDPEIYARI MAGEDMV
SEQDB ID: 3101377DJR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGLLALLDD VAGIAKVAAA SVDDVAAQAA KAGVKAAGAV IDDAAVTPKY VHGFAPAREL
61 PIIWKIARGS IRNKLLILLP AALLLSNFAP WLIAPLLMLG GAYLCFEGAE KVYHVLVPHD
121 TSHVFKEDKP GDPLHLEEEK AAGAIKTDFI LSAEIMTIIL AAIPESGFWM EAATLAVAGI
181 GITVAVYGSV ALIVKADDVG LFLAQNGRLG VTRALGRGLV RGMPGFMHLL TVVGTAAMLW
241 VGGSIVIHGM EVLGFGWLGH HIHDLAYAAG HAVSESWAGA VEWITKAALD GVFGLALGFV
301 LIPLATRLIA PLWRMLTGKG GAAKGH
SEQDB ID: 3101377DJT
Reference:
3101377
Name: glyceraldehyde 3-phosphate dehydrogenase, Isotype: I, Class: EC1.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gap-3
Sequence:
1 MTIKVGINGF GRIGRCTLSH IAASGRDDIE VIKVNATGPL ETAAHLIKYD SVHGRFPGEV
61 SLGEGTMNLG RGDMQMFSTY DLNELDWSGC DVVLECTGKF NDGAKAKVHL ERGAKKVLLS
121 APGKNVDKTI VFGVNDDQLT AADTMISNGS CTTNCLAPLA KVLDEAFGIE HGIMTTIHAY
181 TGDQPTLDRR HKDLYRARAA AMSMIPTSTG AAKALGEVLP NLKGRLDGSA IRVPTPNVSA
241 VDLTFRAGRD VTTAEVNAAV EAAAKGPMKG VLGYEPAPLV STDFNHTPES SIFAPDQTRV
301 VENRMVRVLA WYDNEWGFSV RMADVAVAMG RLG
SEQDB ID: 3101377DJU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQGARSGYL GGRFCRSRDI MTNQISIWLG VILLGTVMLD FAMFGTEHML FLGKKLFELL
61 EWLAFWR
SEQDB ID: 3101377DJV
Reference:
3101377
Name: pantetheine phosphate adenylyltransferase, Class: EC2.7.7.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coaD
Sequence:
1 MRVALYPGTF DPITLGHVDI IRRAAALVDK LVIGVAINRD KGPLFTLEER VAMIEAECAA
61 LSAETGTEIV AHPFENLLID CARDVGAQII VRGLRAVADF EYEFQMVGMN RALDDSVETV
121 FLMADARRQA IASKLVKEIA RLGGDVSKFV PPRVNDALKE RLGRA
SEQDB ID: 3101377DJW
Reference:
3101377
Name: CBS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVQAILKSK ASDGVVTVSA AATVAQAAAI LAEKRIGTVV VSDDGETAQG ILSERDIVRE
61 LAASGSGCLS EPVSTYMTKD LITCGRDAKV QDVLSQMTEG RFRHMPVIEE GKLVGLVTLG
121 DVVKAQLAEL AMEKDALEGM IMGH
SEQDB ID: 3101377DJX
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEPHWDDMKV FLAVAREESL SGAGRQLKLD PATVGRRIAR LESAYDTPLF AKSPQGYTLT
61 AAGERLLSHG EQAEAAMRSA SEALAGTTEG LTGQIRIGAP DGSANYLLPQ VCAQISDENP
121 ELDIQILALP RIINLSRREA DMAVTVSAPT AGHLLVQKIT DYKLHMVASR RYLRGHPPIE
181 TLADLRGHRM IGYIPDMIFD RELDYLNDIG IERVALASNS VSVQLRQAGH GSGICVAHDF
241 TLPFHGNLRR ILTDQVSLTR SFYLVRHQGD QRSERLNRFA EALTRGIRDE VARLEADAMS
SEQDB ID: 3101377DJY
Reference:
3101377
Name: methylmalonate-semialdehyde dehydrogenase, Class: EC1.2.1.27
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mmsA
Sequence:
1 MQELTHYING EHVKGTSGRF ADVFNPATGD VQAKCPLAST EEMARAVEIA AAAQPAWAAV
61 NPQRRARVMM KFVDLLNRDM DKLAEALSRE HGKTLPDAAG DVQRGLEVVE YCIGAPHLLK
121 GEFTDSAGPG IDMYSMRQPL GVTAGITPFN FPAMIPMWMF APAIACGNAF ILKPSERDPS
181 VPLMLAELME EAGLPKGILQ VVNGDKEAVD AILYNPVIQS VGFVGSTPIA EYIYGTGCAQ
241 GKRVQCFGGA KNHMIIMPDA DMDQAADALV GAGYGAAGER CMAISVAVPV GDDTADRLIE
301 KLVPRIEKLK VGPYTAGKDV DYGPVVTAAA KENILRLVNS GVEQGAKLVV DGRDFSLQGY
361 EDGFFVGPHL FDHVTPDMDI YKKEIFGPVL STVRAKTYEE ALGLAMDHEY GNGTAIFTRD
421 GDAARDFANR INIGMVGVNV PIPVPLAYHT FGGWKKSAFG DLNQHGPDAF KFYTRTKTVT
481 ARWPSGIKEG GEFSIPVME
SEQDB ID: 3101377DK
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLPLWFDPT LCLIGGRWQA PRGGDTLPLI NPSDGTEICR IARGTAPDID TAVTAAEAAL
61 AGDWGRMTAT ERGRILSRLG QLVLERVEDL AVIEAWDVGK PLTQARADAV ALARYCEFYG
121 GAADKVMGET IPYLEGYTVY TLREPHGVTG HIVPWNYPMQ IIGRSVGAAL AMGNACVLKP
181 AEEACLTALA FADLAKQAGL PAGALNVVPG LGAEAGAALS AHPGVHHISF TGSVATGALV
241 QQAAGRNVVP VTLELGGKSP QLVFDDADLD TALPFLVNAG CQNAGQTCSA SSRILAQRGV
301 YEEVKARMAA SYAELTVGPA MEDLRVGPLI SARQKEIVTG FLDKGADLTI AAQGRIVDHA
361 PETGAYVRPT LFADVPPDHA LARDEIFGPV QVLIPFDTEE EAIAIANGTD YGLVASIWTR
421 DGARQMRLAK RLRAGQVFVN NYGAGGGVEL PFGGVGKSGH GREKGFEALY GFSQLKTVAA
481 RHG
SEQDB ID: 3101377DKA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCSSLAAYNH RSSPMKRFVL AFCAALMLTG LALVAPEPSQ AGEDKPGLFI TLTTDDTWAA
61 GKAIMFAHQR ALKSGYDTAI WLNVRAVYLA DKKRPSHIHG LMAGQGATIQ DMLSAFIADG
121 GTVLMCGACS KAAGLTQADY IDGVTMGSWP VVESWLFRDN MRTLAW
SEQDB ID: 3101377DKB
Reference:
3101377
Name: ErfK/YbiS/YcfS/YnhG family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQYAVRQIR QENRSPYMST TRMTRRATLL GAAATLAAPA LARAQSTDAF PQAETAIRDQ
61 VPVRRNISSF LQQNWQDHFE TLGVGCLLAD ISSRAVHYWG ADGSYKLYPS SVPMTEELTR
121 RGYTEVVRKT VNPSWTPTAS MRERDPTLPV RMEGGEVGNP LGTRAMYLTW PAYLVHGTHD
181 TRKIGRQSSS GCIGLYNQHV EELYELVQVG TQVRLL
SEQDB ID: 3101377DKC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQKIAKTAML SMAFALSASY VTAGPDQVSI LLGSHHVGAT RTFEEVNPGL FLTWTEVAIG
61 QRLDLTVGAF RNSYGDGSVA VSGVYPLYRT QDWGFDLFAG VAWYPGNGDQ FNHAVDDMVP
121 LGGVQMRYRN LFIQALPGGG NAVDATLTYG LTFPLN
SEQDB ID: 3101377DKD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGTGMRHAT VLTLVISAGI SLSAAALADQ SPSDKARQHS TAARFDPLIW AEAALGNRVD
61 LTMGALPSGS RNGPLALSAA LPVAETGDLR VSLVGALAWD AEMAQSSRYS IGAVAPVAAL
121 EARYRSAYLR AVPSESLGAD TRLNFGLTIP LK
SEQDB ID: 3101377DKE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKRRFPRVN AVLSRWGVAL SDARETQAEQ ARLADFEARG GLEAPAYALS PGMRTFDLAP
61 LVEEYAQHGE ALAALHDPAR NQTGYRSGNG YYDTPDAEAL YLMIRRYQPR RVIEVGCGNS
121 TRITRQAALD GGLETEITAI DPWPRADIAG VVDRFEQARL EEVDPAVFAA LEADDVLFID
181 SSHQVRMSND VAHLFCRIIP ALAPGVVIHV HDVFLPYEYP KRFFYDCPSW AEQYVLHALI
241 QSGGYDILWP GYYLQRARPD AVEALPFLGQ GRAQSFWIRK L
SEQDB ID: 3101377DKF
Reference:
3101377
Name: Glu-Cys ligase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVHWSKTGS GGVMQKEFTL GIEEEYLLVD RDSLQLAEAP EALMSTCQAD FEGQVSPEFL
61 QCQIEVGTRP HATIAAARED LKRLRAGVSQ RAAEHNLTPI AVSCHPFASW KDQHHTRKER
121 YDALQHALGG VARRMLICGM HVHIGVEDKA LRADLMPQLS YFLPHMLALS ASSPFWNGED
181 TGLSSYRLTI FDNLPRTGLP PSFSSWAEYE RTTGILVELG VIEDTTKIWW DLRPSHRFPT
241 LETRIMDVQP RLEHALSLAA MNQALMRMLC RMKARNLRWR HYDRFLVGEN RWRAQRYGVG
301 EGLIDFGDRS LKPMTVLMDE LMGMLSEDAE ALGTLPEIAR LRQIAEHGNS ATRQRRVHAE
361 ALARGEDAGR AVVRHLIEEF HADL
SEQDB ID: 3101377DKG
Reference:
3101377
Name: BNR/Asp-box repeat domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVLHADTEP RFHPLQGSIV KSYDPVTIDV HPGPLLYDPS EERLWRVFSE ARSHQPSFGM
61 SVTAEFSDDS GCSWQGRRTI FPGDQNLKIL ATSGIYLNGR LMVIVNTENA SNQRSLKLIY
121 SDDHGASWLQ QTPDISTNSS HFLFGITHRY DANAGGHDDN GAVFYTYHGG SAFAFTTADK
181 GATWSTHTVF DMATTQFIND QGQVATDFVA SELTIARVPQ SDDYVLYIRG SGYPNYLAAT
241 STDMTSVGTT ALTMPRDSGI LNEGYAPNKS VGSPPHLVSF GDEITLYTFG RENWVKYDIP
301 REQAMLSYTQ NAQDLFANKG IFANKVPRVA ARLPTRAVGM MFHVDTTDSI VAHLRAGESI
361 YEINNDVYSP CVGQLYFLSR TQIPSNVLTT RENLLDNPTF DLWARGDSFT DVTANGTPVA
421 ERWQLWCSGD TLTATREDVD HLLSNNQSFK PKYAMRVKST GQTGNDYSGI RQVFYGKNNL
481 RRFSERELTL TIYGIGELPS NLRFSIHFYN RDNPTIITHA AATLPVPVTA AGQFTSTSAT
541 LYTPSEDAVA LGDNPGIAIV VDQLGTDLWD FAFAGLKLEA GFGSSVLSYP NLEIESSKAL
601 YYFERFGFDS GIGLGTQRAD NDGFRANVKY HPKTIVPSIV TELPKDGFGN PIWTNKFEIR
661 HLTGTTACTG IKAATTIAQK DQAWIDFWTK EAEFDYYAGE CWSIASDAGF FIDVEA
SEQDB ID: 3101377DKH
Reference:
3101377
Name: acyl-CoA dehydrogenase, Class: EC1.3.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDFALTEEQT AIFDMAHAFG QDNIAPYARQ WEAEGTIPKD LWPQVGELGF GGLYVSEEAG
61 GAGLSRLDAT LVFEALSMAC PSVAAFLSIH NMCAKMLDNF ASDELKTRVM PDVLSLNTVL
121 SYCLTEPGSG SDAAALKTRA EKSNEGYVLN GTKAFISGGG YSDAYVCMVR TGEDGPKGIS
181 TVYVEDGTPG LSFGALEDKM GWKSQPTAQV QFDDCKVPAG NLVGVEGDGF KYAMMGLDGG
241 RLNIASCSLG AAQTALNMTL QYMGERKAFG KSIDQFQALQ FRLADMEIEL QAARTFLRQA
301 AWKLDNKTPD ATKFCAMAKK FVTETGSKVV DQCLQLHGGY GYLADYGIEK LVRDLRVHQI
361 LEGTNEIMRV IVARHMLANR
SEQDB ID: 3101377DKJ
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADIDIRVTG RAGRITLTRP QALNAMSYDM CMAIDAALRN WREDDDVALV IIDAEGDKAF
61 CAGGDIAELY DTGTKGNYDY GRTFWRDEYR MNAMIFEYPK PVVSFMQGFT MGGGVGIGCH
121 GSHRVVGESS KIAMPECGIG LVPDVGGTLM LALAPGRLGE YLGTTAGRMG PDDAIFAGFA
181 DIYIPQGDWA GLIEMLEASG DPALLAPHAQ TPPPGELRAM QAEIDRHFGG ETLGDILTSL
241 KGDGGEFSSK ILASLRRNSP LSMACTVEML HRLRGATLSI RKALELEYRF TYRAMDKGDF
301 LEGIRAQIID KDRNPRWQYA DLTVPAVAVS AMLQPLGAEA LTFEEEEA
SEQDB ID: 3101377DKK
Reference:
3101377
Name: 3-hydroxyisobutyrate dehydrogenase, Class: EC1.1.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mmsB-1
Sequence:
1 MKIGFIGLGN MGAPMASNLA KAGHEVTGFD MAPVEVAGVT RAASAAEAAR GADVVVTMLP
61 NGQILRAVAA EVIPAMTAGA ALVDCSTVDV DSARAVAADA EAAGLLAVDA PVSGGIGGAA
121 AGTLTFMAGG SDAAFEKAKP LFDIMGQKAV HCGAAGAGQA AKICNNMILG VTMIATCEAF
181 ALADKLGLDR QKMFDVVSTS SGYSWTMNAY CPAPGVGPQS PADNGYKPGF AAELMLKDLR
241 LSQQAAGSAD ADTPMGQLAE ALYAQFVENE GGKGMDFSAM LPRFEKRTRG
SEQDB ID: 3101377DKL
Reference:
3101377
Name: choline sulfatase, Class: EC3.1.6.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: betC-2
Sequence:
1 MRIPDVKGRP MAVRTRPNIL LIMADQMTPF MLEACGGTGA RTRHLTRLAG RAVQFTNAYT
61 PSPICVPARS CFMTGLYTST TGCYDNGDPY HSFLPTFAHY LTNAGYETVL SGKMHFIGAD
121 QLHGFQRRLN PDIYPSGFLW SYPLPPDGDA SFQAFDFTPQ YLAENIGPGW SKELQYDEET
181 QFRALEYLRH APDTPWMLTV SFTNPHPPYV VPRPYWEMYK DADIPLPDYP ADMDARYSEF
241 DHALRRWHGL HQRGHEVRDP RNLIAMRRGF AALAHYVDDK IGALLEVLDE TGQRDETVII
301 VTSDHGEMLG EKGLIQKRSL YEWSARIPLI IDLPGAAPGR VDTPVSLLDL PATLIELSGQ
361 TPVAPLEGRS LLGAVRGQEL DTVPIVSEYH GEGIMRPSFM VRLGDWKYHY CHGSAPQLYN
421 LARDPGEWHN RAGEPDLAET EARLDRVITG GSFDLERIAR EVWERLPLKQ VVNAAMQRNG
481 TAWDYRPDPD SGRAYIRS
SEQDB ID: 3101377DKM
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKLQTQGVH HITLTGADRQ STIDFWEGVL GMPFVFDQPN LDNPDEGHVY FDPGDGRLIT
61 VFTNETRKGT PDRTPTDPGC VHHIAFNVSQ ATFWQAVERL DERGIDHSGP RDRGFMDSIY
121 FKDPLGLLIE LASYRFEPPV GCTHADVLLR AHRIRVARGD YNIDRIHLAD AIEDLVTAHQ
181 DSLSEDRGPK NPW
SEQDB ID: 3101377DKN
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVDRFGDVLR EWRQLRRMSQ MDLGLSAGVS PRHISFLESG RALPSRGMVL RLCDELEVPG
61 GARNRWLTSA GLAPAYHSRN GDAPEMAPLT QAVDWMLSRH APYPAMAVDR HWRLKTMNRP
121 ARAMFAATGL GAGDGLIDAL LDNPALAAAL ENRDEVERLS LTRLRTELAH FGRDPVLEQA
181 VARLAERVAR QPGAADAPMP AVIPARYRLG EAVLSFFTTI TQFGATGDIA MSELRIEMFF
241 PADDATRQMV EALWGNATPG N
SEQDB ID: 3101377DKP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHSGRMRPRL PRQKQRQQEQ RQKPAVHHHV ERGPGQNRSG AVDHEPGQHP AQDDPRAGLG
61 VAGIDVAHHL PDHHAQPDQQ TAADRGHQPN GGAVQSVRPV QRQDRKVQEE FQGRALIQRD
121 GGEHGQPEQR ADNSGKR
SEQDB ID: 3101377DKQ
Reference:
3101377
Name: UvrABC system protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uvrA
Sequence:
1 MAEQKFIEVR GAREHNLKGI DVDIPRDQLV VITGLSGSGK SSLAFDTIYA EGQRRYVESL
61 SAYARQFLDM MEKPDVDHIS GLSPAISIEQ KTTSKNPRST VGTVTEIYDY MRLLFARAGT
121 PYSPATGQPI EAQQVQDMVD RIMAMEEGTR GYLLAPIVRD RKGEYRKEFL ELRKQGFQRV
181 KVDGQFYELD EPPTLDKKFR HDIDVVVDRI VVREGLETRL ADSLRTALDL ASGIAILETA
241 PRDGSSAPGG ASSPGEEGSQ ETEEPLRITF SENFACPVSG FTIPEIEPRL FSFNAPYGAC
301 PKCDGLGVEL FFDERLVVPD QSLKVYDGAL APWRKGKSPY FLQTIEAIAR HYQFDKNTPW
361 KDLPEKVQQV FLRGSGDEEI PFRYDEGGRV YQVTRSFEGV IPNMERRYRE TDSNWIREEF
421 EQYQNNRPCG ACGGFRLKPE ALAVKIAGLH VGQVVQMSIR EALAWAEAAP ASLSKQKTEI
481 AQAIFKEIRE RLGFLNNVGL EYLTLSRSSG TLSGGESQRI RLASQIGSGL TGVLYVLDEP
541 SIGLHQRDND RLLTTLKNLR DQGNTVIVVE HDEEAIREAD YVFDIGPGAG VHGGQVVSHG
601 TPAQIAADAA SVTGQYLSGS REISVPAERR HGNGKKLTVV KATGNNLREV TADFPLGKFV
661 CVTGVSGGGK STLTIETLFK TASMRLNGAR QTPAPCETIK GLEFLDKVID IDQRPIGRTP
721 RSNPATYTGA FTPIRDWFAG LPEAKTRGYK PGRFSFNVKG GRCEACQGDG VIKIEMHFLP
781 DVYVTCETCK GARYNRETLE VKFKGKSIAD VLDMTVEDAQ EFFKAVPSIR EKMDALSRVG
841 LGYIKVGQQA TTLSGGEAQR VKLSKELSRR STGRTLYILD EPTTGLHFED VRKLLEVLHE
901 LVEQGNTVVV IEHNLDVVKT ADWIIDIGPE GGDGGGMIVA EGTPEDVAAS ERSHTGRYLK
961 PMLNPERVAA E
SEQDB ID: 3101377DKR
Reference:
3101377
Name: rhodanese-like domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFFFRKPSLP GLSITEAVDA AARGDLLVID VREAGELAAT GKAAGALHVP LMQLSARADR
61 NHPEFEPLLE GASRIAVYCA SGGRSARARK LLLGLGYPEV HNLGGLGHWA RAGGRIERA
SEQDB ID: 3101377DKT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVVLQMAPP IASGRGGQGL ITCPGHKERR VASLNRIAMA RSSRRMIKDL GPEGLEVAEI
61 SGKWGQQFPF RSYRRFIYPE YDICAGPYCD AAGEIEQFDL ILANQVWEHL DRPYEATLNV
121 LEMLRTGGHF WLAVPFFVPF HAAPMDNSRW SARGLRNFLI ECGFAEEEIR AEQWGNRHAA
181 LRNLERPWPP VYDPETDPLD NDPDFPICAW AIARKT
SEQDB ID: 3101377DKU
Reference:
3101377
Name: von Willebrand factor type A domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRIGLAALA LCLPATLAAQ DQPSAILVLD GSGSMWGQIE GKAKIEIARE VVTGLLADLP
61 QDQPLGLTVY GHRRKGDCTD IETLVAPAPG NRAAIASAVA GLKPKGKTPM LEAVRQAAEA
121 LRYTEEKATV ILVSDGVETC DADPCATAAA LEAAGVDFTA HVVGFDIDDP QALAQMQCLA
181 DQTGGTFRSA ANADELGAAL AAAATVKPDP APGPARLLFA ATEAFGSTFR EVEVVWEVFT
241 EDGAQAMDAT QVMSGETQLP PGTFLVRALR LSDETVEERR VTLQPGGREV VEIAFDEPLP
301 AATLSAPASG TAGGMVEVSW TGPDGEGDYL AAGPVGANDA SYLTFEYTAK GNPLPLRLPV
361 EPGAYEIRYV LADGIQTLAR LPITVSERSF ALDAPGSAPV GSLVQVEWSG GGFDEDFLTV
421 AKLDASSDGN DYLTYAYVRD GNPVGLRMPL APGQYQLRYV VGQDSSVAIS QPITVSDLSV
481 TLEAPDRVAA GSMVAVSHTG PAYDGDYVTF VTPDAGVLDY LGYAYTSDGA TVQVQAPDMP
541 GSYELRYVST ISGERIFARR AVVVE
SEQDB ID: 3101377DKV
Reference:
3101377
Name: pyruvate dehydrogenase complex, Subunit: E3 component
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: lipoamide dehydrogenase
Sequence:
1 MAAQSYDVIV IGAGPGGYVA AIRAAQLGLK ACVVEREHLG GICLNWGCIP TKALLRSSEV
61 FHLMERAKEF GLKADNIGYD LDAVVKRSRG VAKQLSGGIG HLMKKNKIDV VMGEATIPAK
121 GKVSVKTDKG TQELTAKNII LATGARAREL PGLEADGDLV WTYKHALQPV RMPKKLLVIG
181 SGAIGIEFAS FYNTLGADTT VVEVMDRVLP VEDAEISAFA KKSFVKQGMK IMEKSMVKQL
241 DRAKGKVTAH IETGGKVEKL EFDTVISAVG IVGNVENLGL EALGVKIDRT HVVTDAYCRT
301 GVEGLYAIGD IAGAPWLAHK ASHEGVMVAE LIAGKHAHPV KPESIAGCTY CHPQVASVGY
361 TEAKAKELGY DIKVGRFPFI GNGKAIALGE VEGMIKTIFD AKTGELLGAH MVGAEVTEMI
421 QGYVVGRQLE TTEEDLMHTV FPHPTLSEMM HESVLDAYGR VIHM
SEQDB ID: 3101377DKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWRTDVMKTL KDLFLALLNA TLILVALCLF LGWRMMATVD TVSDRVTASI AELTPLRDEI
61 AGVRAELSGL RADLAAAPGT AASARLQNRL DGLEARLDGM QARMASLATL PDQLLDRAFE
121 TAADRMARGV AELRGCQPAP GGT
SEQDB ID: 3101377DKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVGPEDVLKF WLDEVGPAGW YAQDEALDAR IRDKFQSTWE AAAEGRFSLW LTYPSGALAY
61 IILTDQFPRN MFRGSGKAFA TDRAALMAAK CAVDKGWDLK IDEPARQFFY LPMMHSENLC
121 DQERCVRLMC QRMPESGASN LLHARAHREV IRKFGRFPYR NQALDRASTQ SEAEYVSDGG
181 YGATVQQLQR KAG
SEQDB ID: 3101377DKY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLQVLSSAWA LLLGIGLLMV GNGLQGTLLG VRGEIEGFST FEMSLVMSAY FVGFLGGSRM
61 APEMIRRVGH VRVFAALASF ISAVMILYPA FANIYVWMLG RVIIGFCFSG VYVTAESWLN
121 NAADNSNRGK ALSLYMIVQM TGIIVAQGLI QVGDPGGYEA FIIASIVVSI SFGPILLSIS
181 PTPAFDSTKP MSLKALMQTS PLGCVGMFLL GGVFSAQFGM SAVYAANVGL TLSQLSIFVA
241 TFYVGALVVQ YPLGWLSDRM DRRVLILFVA LVGGGGAMLG AMLGGQFEFL LLAALIIGGL
301 SNPLYSLLIA YTNDYLDYDD MPAASGGLVF INGLGAIAGP VTTGWLMSDG VFGPPGFFFF
361 IASLMFATAA YAAYRATQRP STPVEETSSM AYMYPTASPV AIEMAQEVAF EADQEAEEQK
SEQDB ID: 3101377DL
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLLQITDLS LSIHAYDILK RVSLTIDAGE IVAVTGESGS GKSMTALAVM QLLPGGARAS
61 GSIRLDGQEI LTLPEAEMCA LRGAAVGMVF QEPMTALNPV KTIGDQVMET ILIHKAMTPI
121 RAEERAREVL TRVGLPPDRF PLSRYPHELS GGQRQRVVIA MAIALRPKLL IADEPTTALD
181 VTTQAQILDL LKGLVQEYGM GMLMITHDLA VVADMADHIT VMRHGEVVEA APTQRLLTGM
241 SHPYTKMLFA ASDHRVTLPA PPPPAPLLEV SEVVRDYALP RTRLFAHPGH HRAVDHVSFA
301 LNRGERLGLV GESGCGKSTL TRAILGLEPV QGGEIRLAGQ PVYDGKRANP EIRRRMQVVF
361 QDPYGSFNPR HRVDRLVTEP FHLLDAPPTG SDRSDRIAEM LTAVGLSPDD AGKYIHEFSG
421 GQRQRIAIAR ALIIRPQLIL FDEAVSALDV SVRAQILDLL AQLCSEYDLT YLFISHDLSV
481 VRTITDRVLV MQSGRIVEQG ETAQVFSDPA HPYTRALIAA APRLPETGAR RA
SEQDB ID: 3101377DLA
Reference:
3101377
Name: Met(adenosyl)/tRNA ribosyltransferase-isomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLSDFDFDL PDDLIATRPA QPRSSARLLV ARGDAISDAV VRDLPDWLRP GDRLVLNDTR
61 VIPARLSGTR QRQSAQGPVT ARIEITLLEP RADGSWSALA KPLRKLREGE TIIFSNDLSA
121 DVEAIEDGQA LLRFNLTGPD FDAALAQAGA MPLPPYIAAK RAADEQDKTD YQTVWARHSG
181 AVAAPTASLH FDDTLLAALA AHGVTFTHVT LHVGAGTFLP VKVEDVTTHK MHAEWGRVSA
241 EAAAEIAATK AAGGRVIPVG TTALRLIESA ARGGQIAPWE GDTDIFIYPG FDFRVADGLM
301 TNFHLPKSTL LMLVSALMGQ ESIRKIYAHA VENRYRFFSY GDASLLLPG
SEQDB ID: 3101377DLB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDIDKTSDG ADPGKPRRSR RRVTLLWAMR GTVLLVFLAG FAGLMVVGQT LQAPPWLQSR
61 VESRLARALE GGAIRFGGVY FVINKGWRPR LRLRDVELSD AGGRVIARLA DAEASLAMRP
121 LLRGQVQPKR IVLNGASAAL RRDAEGQVSL SLGGQGGGTV GQASTLAQLL ESLDAVFLHP
181 QLSALSSVEL TSLSLEYEDL RQGRGWTLDG GQVLITRGGG DLRIATEFSL LSGRDFASRF
241 EANYTSTLGQ PAASFGISIE DLAAADIAAQ APALAWLQVL DAPISGALRG GIDAAGTLTP
301 ISATLQIGQG ALQPNPKTRP IPFASARTYF TYDPAQQRLS FAEVAVDSAW GAAQAEGVAY
361 LDGVEAGRLD RLVGQFRLHG LRVNPAAVYP EPLTIDRAEV DFRMTLNPFQ LRIGRMDVID
421 DGRTLRLDGD LSAAPEGWQL ALDAQLDAIT PAQVLSYWPE GVAPKPREWV AENLVEAQLS
481 DLDLALRLRP GAKPDLYADF DFAEAQIRYA RTLPPLVRAR GQASLLDGRF AVTADAGVVV
541 AAQGGEMDAT GTSFIIPDIG IRQAAPGIAR IMASGPVTAA LSLLNEPPLS ILDKANLPVD
601 LAEGTARLTG TLALPLKDKV RIADMEFHLA GVVEGVASEV LVPGTRVSAP RLEVSGDQTR
661 IALQGAGLFG SVPASMRWQQ PLGQGQRSNL SGRIALTPDL IREQRLGLPD GMLTGAGEAD
721 FTLGIGGGEP LRLAAQSNLS GVRLSLPELG WSKPPASTGR LALEATLGAG GRVETIEVEA
781 AGLRTRGSIE FNPDRSFARA RFSSFELGDW LAVPVELVGR GAGAVPDIVV QGGVLDLRRA
841 SFGSGASGGS GGGGAAPAVS LALDRLQVSD SMTLSGMRGS FSTGGGLNGR FTGSLNGQAP
901 ISGQLIGRGA RSAVFLQAED AGAVFRAAGI LDQAHGGSFQ LVMEPVGAPG NYDAQLRVRN
961 TRVRDAPAMA ALLNAVSLVG LIDEMSGQGI LFGEIDSKMR LTPTTLTVLE GSAVGPSIGV
1021 SINGTVDTEN RVLDLRGVVS PIYLLNAIGS VLTRKGEGLI GFNYTLTGPM QRPQVFVNPL
1081 SGLAPGFLRD IIRAPAPSLP AVPEENSAPA PAAPAATPEP APRPAPAPQP ARPHSGGGDR
SEQDB ID: 3101377DLC
Reference:
3101377
Name: AhpC/TSA family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDVTDIAPE FTLPRDGGGE ISLSDLRGRA VVLFFYPRDD TPGCTKESIG FSVNLQAFAD
61 AGAQVLGISR DTVAKHDKFV AKHGLTTPLL SDAESDVCER YGVWVEKNMY GKKSMGIERT
121 TFLIDGEGRI AQVWRKVKVD GHVDAVLDAV RAL
SEQDB ID: 3101377DLD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLSLTEMAV EVLTTADGRA KTALSRRHAA AWFAARKGEA TPIAVGTANP PPHPARPERP
61 ELLSPRDVPR RRPGSEAGRI ALLHAVAHIE LNAVDLHWDI IARFGHVPMP IGFYDDWVKC
121 ADEESKHFNM ICDVLESIGS HYGALPAHAG MWRAAEDTAE DLMGRLAVVP MVLEARGLDV
181 TPGMIDIFRK ATLPAAVAAL EVIYAEEVGH VAYGSKWFHF LCGRENADPK EVFHALVRRY
241 FHGALKPPFN EEKRAEAGLP PDFYWPLAEE TEQRNRGV
SEQDB ID: 3101377DLE
Reference:
3101377
Name: peptidase, Isotype: M23/M37 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVSADFRRNR AVMGRVFALL VNKLARSALR RYSHVPRPRH HSIPGFCEGT TRDGRVRTRL
61 AIKIHAFLEQ KFPERRVFLK SDTDTRFIRL RPETQLIAFG GATLLVAWTI VATAILLMDS
121 IGAGNFREQA KRDQATYQER LNALSQERDA RAEEAVAAQR RFNAALTQIS AMQTELLASE
181 TRRRELETGV DVIQTTLRAT MKQRENARAE LAKMLDEKGD SAAVQEVAAE VPAQMDFMAA
241 ALERTAQQRD QIRADAQSAL DARAELELEI KLMEERNDQI FRQLEEAMTI SLEPLDKMFR
301 SAGMPTDRII EEVRRGYSGQ GGPLTPLSFS TRGEEPSADE IRANLLLQQM DQLNLYRLAA
361 EQAPFASPVR AAVRYTSGYG YRRDPKTGGK RMHNGSDFAG KHGTDIHATA DGVVTHAGWQ
421 SGFGKLIKIR HAFGIETYYA HNSQLRVKVG QRVSRGDHIA DMGSTGRSTG THLHYEVHVN
481 GRPVNPMTYI KASRNVF
SEQDB ID: 3101377DLF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSKSKINEP APKAPEAAKP AAPAAPAAPA PSDYKAAAPK PKPPASILSS DLHITGNIKT
61 SGDIQVEGSV EGDIRAHLLT IGETATIKGE VTADDVVING RIVGRVRGLK VRLTSTARVE
121 GDIIHKTIAI ESGAHFEGSV QRQDDPLNPG RAAKPGANPA AAAPAPKPEG A
SEQDB ID: 3101377DLG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLGGPGMRI FSLLLAIWLA LPALAGPEIW RHEWPDTDFD KTSVAHWGEI LSGGPPKDGI
61 PALSDPAFVS AATAEDLEGR EPVITVALPG EVARAYPLRY LMWHEIVNDQ IGTVPVAVTF
121 CPLCNSGLTF DRRSPAGELE FGVTGKLRNS DMVMYDRQTQ SWWQQAQGLA IVGRLTGTEL
181 QTLPSWMESW DQFRARAPQG LVMAEPAFRR AYGRNPYVNY DSARRPFLYD GEAPPHGIPA
241 LARVVRVGAR AWPLTRLAAA GALEEAGLRF EWREGQASAL DTARIGDGRE VGSIRVRDGQ
301 GRDIAHDVMF AFAFHAFWPQ GEWMLGAE
SEQDB ID: 3101377DLH
Reference:
3101377
Name: peptidyl-Pro cis-trans isomerase, Isotype: cyclophilin-type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYKLAALLAL FAVPAGATGL KIEVAGEANG TVTIDLLEDV APKHVEQITA LAASGAYDGV
61 VFHRVIDGFM AQTGDVQYGR MGGDMRLAGR GGSDRPDLPA EFSDITYERG VVGMARAQDP
121 NSANSQFFIM FAPGPFLDGQ YTVVGKVTGG MDVVDAIKRG TGPNGSVIGQ PDQMKSVTVT
181 D
SEQDB ID: 3101377DLJ
Reference:
3101377
Name: peptidyl-Pro cis-trans isomerase, Isotype: cyclophilin-type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEIKDPENT IIIELKDGNV VIELLPDVAP KHSERMKELA RSGEYDNVCF HRVIDGFMAQ
61 TGDVANGDME DGFNIRMAGT GGSSLPNVPA EFSKLPHDRG TLGAARSANP DSANSQFFIN
121 FKDNHFLNGQ YTVYGRVISG MEHVDAITRG EPPANPDRMI SVKVAADV
SEQDB ID: 3101377DLK
Reference:
3101377
Name: phosphoglycerate kinase, Class: EC2.7.2.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pgk
Sequence:
1 MGWKTLDDMD LTGKRVLVRV DINVPIVDGV VTDSTRIRRL MPTIRDILAA GGRPILLAHF
61 GRPGGERRKN LSLGQLVPTL ERAFETKVLF ADDCVGPAAE EAAEALQPGQ VLLLENTRFH
121 ASETKNDPDL AAGMARLGDI YCNDAFSAAH RAHSSTEAIA RLLPSCAGRL MQAELEALEK
181 ALGKPERPVT AVVGGAKVST KLELLGNLIE KVDYLVIGGG MANTFLVAKG LPVGKSLAER
241 IMKDTAAEIL AKAEAAGCTI VLPSDVVVAE KFESHAPHQI LPNDRCPDEG MILDAGPDSL
301 AAIKAIFEKS RTLIWNGPLG AFELEPFDAA TNAAALKAAA LTRAGKLISV AGGGDTVAAL
361 NASGAAGDFT YISTAGGAFL EWMEGKTLPG VAALIQAG
SEQDB ID: 3101377DLL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMFRMVFMTT GLRWLHSTDL GDMRKAILSE DDDGPDGGGI RPAGLRARRS AAHAG
SEQDB ID: 3101377DLM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAKSRVRAF SLKLRMAVLK DRRAELKERI LQELKRPAPC AQTLRMLKRR KLTLKDELAR
61 HEGLLRTLDA MGHRAGLQSG NQLGRV
SEQDB ID: 3101377DLN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPDITLRQL SYFSTLVAAG QYRRAARSLG ISQPSLSLQI AALEKAVGAR LLERRRSGLI
61 LTPEGRDVSE MVARILREVE ALTLYASPMR DNMTGTLRLG STPTIGPYLL PRVLRQLHRQ
121 YPRLKLAIRD GAPRDLVEDL AAGRYDLILT HLPVSRDDIR VAPLFREPLE LAVDPAHRLA
181 GATQVRQADL AGETMLSLSS GYALHGQVQA LCESAGARLS TEFEGTSLDA LRQMVSLGMG
241 ITLLPALYVA SEVRTRGADV VTRPLRPAIH RIVGLAWRTA SGTPPAIERF TELTRQVIRD
301 EMSGILQPSA
SEQDB ID: 3101377DLP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRTTRPSIG AIVFFAVSFA LAIYFTFAAV QGDFGLFRRV EIAAEREVLS RDLAKVEEQI
61 VRMENLTRRL SDDYLDLDLL DEQARSVLGL LRADEIVIR
SEQDB ID: 3101377DLQ
Reference:
3101377
Name: pyruvate dehydrogenase complex, Subunit: E1 component alpha, Class: EC1.2.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdhA
Sequence:
1 MTATRKTSRK SNTSAEELKH YYREMLLIRR FEEKAGQLYG MGLIGGFCHL YIGQEAVVVG
61 LEAAAEEGDK RITSYRDHGH MLACGMDPGG VMAELTGREG GLSKGKGGSM HMFSKEKHFY
121 GGHGIVGAQV PLGAGLAFAD KYQDNGRVTF TYFGDGAANQ GQVYETFNMA ALWKLPVIFV
181 IENNQYAMGT AQKRSTSSPD IYTRGEAFGI PGETVDGMNV LSVKEAGEKA VAHCRAGKGP
241 YILEVKTYRY RGHSMSDPAK YRTREEVQKV REQSDPIEMV REMLLSGKHA TEDDLKAIDK
301 EIKEIVNQAA EFSKESPEPS VDELWTDIYA
SEQDB ID: 3101377DLR
Reference:
3101377
Name: pyruvate dehydrogenase complex, Subunit: E1 component beta, Class: EC1.2.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdhB
Sequence:
1 MATEILMPAL SPTMEEGTLA KWLVKEGDTV SSGDILAEIE TDKATMEFEA VDEGIVGKIL
61 IAEGTEGVKV NTPIAVLLED GESADDIASA SSGAAAPSSA PVAAPAEKAP QGAAEAPAAP
121 PVDLSPDWPA DAPMKSQTVR EALRDAMAEE MRADEAVYLM GEEVAEYQGA YKISQGMLDE
181 FGSKRVIDTP ITEHGFAGIA VGSAFGGLKP IVEFMTFNFA MQAIDQIINS AAKTLYMSGG
241 QMGCPIVFRG PNGAAARVGA QHSQDYAAWY MQIPGLKVAM PYSAADYKGL MKTAIRDPNP
301 VIFLENEILY GRSFDVPQID DLAIPFGKAR IWREGTDVTI VSFGIGMQYA LEAAERLATD
361 GISAEVIDLR TLRPMDLPTV INSVMKTNRL VTVEEGWPQG SVGSYIASEV MQQAFDYLDA
421 PIITCTGKDV PMPYAANLEK LALVTTDEVV AAVKQVTYR
SEQDB ID: 3101377DLT
Reference:
3101377
Name: pyruvate dehydrogenase complex, Subunit: E2 component, Class: EC2.3.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdhC
Comment: dihydrolipoamide acetyltransferase
Sequence:
1 MPTEILMPAL SPTMEEGTLA KWLVKEGDSV SSGDLLAEIE TDKATMEFEA VDEGIVGKIL
61 VPEGTEGVKV NTPIAVLLDE GESAGDIASA SSGATAPSSA PAAASAEKAP QGAAEAPAAA
121 PAAPKAADGA RVFASPLARR IAADKGLDLS QIAGSGPHGR IVKADVIGAT APAAAPASAA
181 PAPAAAAAPA AAPSGPGADM VARMYEGREY EEVKLDGMRK TIAARLSEAK QTIPHFYLRR
241 DIKLDALMKF RAQLNKQLEG RGVKLSVNDF IIKAVANALQ QVPDCNAVWA GDRVLKLKPS
301 DVAVAVAIEG GLFTPVLKDA DMKSLSALST EMKDLATRAR DRKLAPHEYQ GGSFAISNLG
361 MFGIDNFDAI VNPPHAGILA VGSGVKKPVV GADGELTVAT VMSVTMSVDH RVIDGALGAQ
421 LLQAIVDNLE NPMVMLA
SEQDB ID: 3101377DLU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEHRSGKSSR RVEKERTGNF YGHKTFEVDW RLHLKLFVQK IFAISLAVFA MSPAMARQLC
61 LKPLPADRSV EVSEFGLPSV SKLLSVPDFD QPFLDFGMGS KTILTVADGK LRDFTEAPMS
121 SWNRLFPTII SQNDDTTWAY TNVRPALFLL DPETSTFVRH PISDTPGLRG FSHPDWRREH
181 EDRTIDRRNQ GDGPIYAYVG DKLFKIVAGE LEEATVPPTW TASDSVPIDF PGVGVFAHVK
241 GQIWFRRSDA QEWHMIASIK DLLSLHSQSP FSIFQVRYEQ ETGSIWVMLE DRVLVGRLEQ
301 DSIAPELDYQ FAGGVILHPP SGKILVWAGE ALTDQGNDSP RPISGSPGLW EMSAVAPTRV
361 PGFQAQPRLS NTVPLLSTLF HDPTQTTIVS HAGGFAAFDG ESLRDLAELT PEGDRKPFLR
421 KVAGRYFMRS WDWLAEITDD LDLRPIPLPQ PVEQRVELLF SPKLKTFILH SAGWETVFTS
481 TDLVSFHEVQ GDGTTIIGVI GEMPGEAAVL ANSKHQVFLI QYCE
SEQDB ID: 3101377DLV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCHHQQGNHD CDVSFNVLSN KHFESEFDRL ITQNGLLEGP VCGHCGARYL DQPGNFIFNG
61 SHGKIPAGKN GRKAKPAGFR VIHKPCKGKA GARFTVSLDH QQQEKMHDNV RLLRALVNGA
121 RITALRKLLV DPDTGKKCGV ERVYNRIFWL EKNLLAFERA KLKEWRDKTE AQGGHPHMRI
181 AHDDVVIGVN WESRSDRRLT PLQCSVSADI DTGYVFRIDA NFDTTVDPVQ VVQENYLDDQ
241 LMPTNVRQAY AQKSGNNFTV PSMHFQRPTG RFEEAALFAS AESHWRVFSL RLDKEYAAQG
301 LAQLPQDDLD EIANANEHRK IFNTLRNGYF GFQETDRDSR GSFNGSVVKP TYTKAAHLAC
361 LRDLLPAKRL TIVGEQEASM VRVVPHVFRD WIQEDRFEWH VMHFDKNASE PENSRRATAF
421 KTAFDIYKAR AHASGQTQTS DHALLSQFCA GAMAPAFNRD PSGHMTPFPI INFRSVQFPQ
481 LWVRSGVEIH GETREVVGFP VLRKKYRQKL KGSAFHVMPT DPDLCDALAR RYIKATIHPV
541 SSFMNSLRER VSPTKRARGR SARNGPSYIN GATFNPAVLV AFLNIYRINY NRFEERPYSS
601 ASARNSNQVA VSSGTQSIRR PGSKVKVKAP KQRKLAPIQS TPAIRLGADA RRMTSTTRAT
661 PDPRRILYRP WLNHGTPLWK KFETR
SEQDB ID: 3101377DLW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQSSECARP HRRGFDFCAS AVFLCTQRAQ SVGGCAMRGC PLLLWRPETC QNPAPFCRGF
61 AAQGFTAVSV VSRAVTKTTF FDENLIERVL WQFTMKEQRA NAIPATCRYA RYSANPTPTP
121 RPVKINESDR TMNFEEKIAT HYGHGNLTAA IRSGLQAQGI TPEQASVEDL GPVDEFHIGG
181 RAATVHFFDQ IDLSETSKAL DIGCGLGGAA RYAAHSFGSQ IEGIDLTPEY VETGGALCQW
241 VGLSDKVNLS VASALSMPFE SGDFDIAYMM HVGMNIEDKR ALFKEVARVL KPGGTFAIYD
301 IMRSNDEDLV YPVPWASSAE TCCLAGPATY RAALEEGGFV VRQENDRRDF AIDFFEKMKK
361 ANAGQKSPPP LGLHVLMQQT TAEKIPNMIA NLQAGRIKPV EIYAVKQ
SEQDB ID: 3101377DLX
Reference:
3101377
Name: Cys synthase, Isotype: A, Class: EC2.5.1.47
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cysK
Sequence:
1 MIFTTTGRGR LYGSILETVG NTPVIRLNTI APGHVTMYVK FEAFNPAGSV KDRLALNIIE
61 AAEREGRLQP GQTVVEATSG NTGIGLAMVC AAKGYPLVIT MHDGFSVERR RLMRMLGAKV
121 VLTRKEDKAV GMVVKAKELA EANGWFLAHQ FETKDNADIH EATTAQEILG DFDGERLDHV
181 VLGYGTGGTV AGLGRVLKAA RPGLKITLSE PANAALVQSG EAQQRNAEGE PAATHPAFNP
241 HPIQGWTPDF IPLVLQEALD QGYFDALEPV SGPESIAWSK RLAAEEGILT GISGGASLAA
301 AMKVAETAPE GSVLLVMLPD TGERYLSTPL FEDIAAEMDE AEQALSASTP GYQY
SEQDB ID: 3101377DLY
Reference:
3101377
Name: Ser O-acetyltransferase, Class: EC2.3.1.30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cysE
Sequence:
1 MMETRKKLAP VDPVWDRITA EAQDAVDREP LMGGLVHACI LHHKNLDRAL SYRISAKLCS
61 NEMSMMVLRE IVDDAYDSAP ELIEAARADL MAVYERDPAC HRLLQPILYF KGYQAMQAYR
121 VAHWLWTRKR YDLAYFFQMR VSEIFGVDIH PAARIGKGIM IDHAHSIVIG ETAVVGDNVS
181 MLHSVTLGGT GKEEEDRHPK IGDGVLIGAG AKVLGNIKVG HCSRIAAGSV VLSEVPPCKT
241 VAGIPAKIVG EAGCDQPSVS MDQRFPNGSD
SEQDB ID: 3101377DM
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRNLILGAG LSSLVVLAAL ISFIWTPYDH AALNIPAKLQ TPNARHWFGT DHFGRDMFSM
61 IMVGARTSIA VALLAVGIGM SLGVPLGLAA AARKGSWLDE LIMRGNDLVF AFPSLVIAIL
121 ITAVFGAGAV NAIIAIGIFN IPVFARITRG AALSLWEREF ILAARVAGKG AARISAEHIL
181 PNVANLLIVQ GTIQFSLGIL AEAGLSYVGL GAQPPTPSWG RMLADAQTMV SFAPHLALIP
241 GLAIILTVLG LNLMGDGLRD WLDPRLRVAR T
SEQDB ID: 3101377DMA
Reference:
3101377
Name: dnaK suppressor protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMGMVTELNE IALARFRAQI MAQLQELRET GAAGQAARAV VELDQQSVGR LSRMDALQNQ
61 AMAKAQQARR EVEALRLTRA LARIEAGEYG YCDSCGDDLP EGRLSLDPAA TRCVSCARG
SEQDB ID: 3101377DMB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPVLHGDVS AAARALLNAP AGARRSLCRR LLSEAEMADA HVRATGRLHP LFGNGSLMSA
61 ARKRVLADEP GFDDPGYCRC FEIVLSALID RQVSRAHS
SEQDB ID: 3101377DMC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATILLSAAG AAIGGSIGGT VAGLSSAVLG RAVGATVGRV LDQRLLGSGA EAVETGKVDR
61 FRLTNSGEGH AIAQVFGRMR VGGQVIWASD FVETSTTSGG GKGGRSQPKT TQYSYSLSLA
121 VALCEGEIAG IRRIWADGDE ISPEELNMRV YRGSADQLPD PVMEAVEGAG LVPAYRGTAY
181 VVFEDLDLDR FGNRVPQFSF EVVRVDQPDA DPGELGLAGL VKGVALIPGT GEYGLATTQV
241 NYSNGPGSYW AANSNSPSGQ TDLVTSLEAM GDELPGVGAA SLVVSWFGGD LRCGECEIKP
301 KVERKNIDGS NMPWRVSGLT RATVDEIARI EDRPIYGGTP ADAAVVEAIR HMNEAGQRVM
361 FYPFILMDQL AGNTLTNPWT GEEGQPHLPW RGRITLSLAP TQPGTPDGSA AADAEVAAFF
421 GTASAADFVI GDGVVTYTGG EDWGLRRFIL HYAALCKAAG GVSAFCIGSE MRGLTQIRGA
481 AGFPAVQALR ALTAEVRAIL GPETKLGYAA DWSEYFGYQP QDGSGDRFFH LDPLWADPEI
541 DFVGIDNYMP LSDWRDGEEH ADAQAGTRHI YEQAYLRANV EGGEGYDWYY HSPEAEAAQI
601 RTPITDAAHG EPWVWRYKDI RNWWANTHHE RIGGNRQALP TAWVPQSKPI WFTELGCAAV
661 DKGTNQPNKF LDPKSSESSL PKYSNGARDD LMQLAYLNAV LGYWDDPENN PVSIEYEAPM
721 IDMANAYVWA WDVRPYPAFP NNRELWADGA NYARGHWLNG RSGNRTLASV VREICARAKV
781 SAVDLGALWG IVRGYSVDQV SDARSALQPL MLCYGFDAVE RDGKLVFRLR DGGRPIELDR
841 ALLAVHEEID GALEHRRDSD LELSGRVRLR FVQADANHDV VAEEAVLPDD ATHAVSSNEM
901 PLALTRAEGR QTVERWLAEA RLGRDTIRFA LPPSRLALGA GDVIRLPEAG DEIGGLYRID
961 RIEQAHMQLI EAVRIEPNVY LTSDMADDSP VVQEFVPPVP VLPMLMDLPL MTGDEVPHAP
1021 HVAITAQPWP GTVAIYSSAS DEAYRLDKIV AARAVIGVTE TPLARARPGL WDRGDAVQVK
1081 LVAGELESRP REAILSGENL AAIGDGSTGN WELFQFRDAE LIAPDTYLLR NRLRGQLGSD
1141 ALMPDVWPAG SQFVLIDPRV VQIDLASSER RIARHYRIGP ARRGYDDPSY VHRVEAFDGI
1201 GLRPYAPAHL RAVEIGSEVQ LSWVRRTRID GDDWDLPEVP LGEESESYLV RVIKDGSVLR
1261 EEIVAAPSWT YEVAAQVADA VARPFDLSVA QVSARFGPGL FRSLTVEA
SEQDB ID: 3101377DMD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGRGGEVVA IARGWLGTPY RHQASTLGAG SDCLGLIRGV WRGLYGQEPE AVPAYSMDWS
61 EPQGEERLWQ AARRHLIESA QGPLALGEVL LFRMRGSSVA KHLGIVSEVG VSPRFIHAYS
121 GHGVVESPLS APWLRRVVSR FEFPQEVS
SEQDB ID: 3101377DME
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGGPSEAMQA HLASGVTTLC RCWAILRKDG VRFGFTDHDC MLEFDGFTFK ADSGLTAAAL
61 EQSTGLSVDN SEALGALSDA AVREEDIEAG RFDGAEVLSW LVNWAEPEQR WLQFRGSIGE
121 LRRGGGAFQA ELRGLTDALN QPLGRVFQKP CTAVLGDGGC RFDLDQPGYR AEIAVEQVED
181 GRVFRWTDLS GFEPGWFQRG RLDVTGGAAA GLWALIKSDK VSAAGREIEL WEPIRAALRP
241 GDGLRLTAGC DKRMETCRLK FNNLLNFQGF PDLPREDWVM ATPKRTGANS GGSLR
SEQDB ID: 3101377DMF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFHEVRFPA NLSFGSIGGP ERRTDIVTLV NGFEERNSPW AHARRRYDAG VGMRSLDDIE
61 TLIAFFEARQ GQVYGFRWKD WSDFKSSLAS AEPRYDDQVI AVGDGAETEF QLVKAYRSGT
121 NSYARPIKKP VLGTVRIGLD QDEMKEAVDY HVDLTTGLIR FEAPPPVGVE ITAGFEFDVP
181 VRFDTDRIQT SVASFRAGDV PNVPVVEVRV
SEQDB ID: 3101377DMG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGFDWPALM RAGMLGLRLT PEAFWRLTPA ELRLMLGQGA GNAPMGRAGL DALLAAWPDQ
61 TQGEDHGGD
SEQDB ID: 3101377DMH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNPWTGEVA LVIDGQQRVL KLTLGALAEL EAELESGSLV ELVQRFEGGA FSSRDVLALV
61 VAGLRGGGAD VTRAQLLRAE IAGGPLAAAR AAAELLARAF MVPGET
SEQDB ID: 3101377DMJ
Reference:
3101377
Name: major tail protein, Isotype: TP901-1 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAQNGKDLL VKVDMNGTGL FETIAGLRAT RVSFNAESVD VTSLESQGGW RELLSGAGVK
61 SASISGSGVF KDAGTDERAR QLFFDGETPD FQVIIPDFGI VEGPFQVTGI DYAGSHNGEA
121 TYEVSLASAG ALSFTAI
SEQDB ID: 3101377DMK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYGVAAALQ TAVYQHLLAD AGVAALVGTD IYDALPSGTL PQTYVLLGPE EVRDASDQSG
61 EGAEHRFTVS VISEAAGFAG AKTLAGAVSD ALDDAALSLA RGRLVGLWFD RASARRTGTG
121 GAVRQIDLRF RARVEDN
SEQDB ID: 3101377DML
Reference:
3101377
Name: head-tail adaptor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAPHLNRRL LLETPARVAD GAGGYAESWT ALGTVWADVS ARSGAERFEA GASRSRVSYR
61 ITVRAAPEGS SMRPAPEQRF TDGARVFVIR AVAEHDPAGR FLTCFADEEV AA
SEQDB ID: 3101377DMM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSELMMLIE ETAVADAALP VAQFKAHLRL GTGFAEDDVQ DEVLRSFLRA AIAAIEARTG
61 KILISRQFSW TVYNWRDATG EVLPVVPVQM VTSVTLRDGG GQDTVLDPAA YRLERDSQRP
121 RLRPAGALLP TVATGGAAIV ALVAGMAADW GGLPADLGQA VLLLAAHYYE YRHETALGDG
181 CMPFGVTSLI QRYRTVRFGS GVVQ
SEQDB ID: 3101377DMN
Reference:
3101377
Name: major capsid protein, Isotype: HK97 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKTEIPALA GEGVPLVQEV KQAMTGFVNE FKGFRTEVET KLKQTEERMT MLDRKSLTAA
61 RPHLAAAVED GAPHQKAFDA YLRSGDDDAL RGLTLEGKAM STAINSDGGY LVDPQTAERI
121 KSVLHATASI RAIASVVHVE ANSFDVLIDH TDIGAGWADE TAAASETGTP SIDRISIPLH
181 ELSALPKASQ RLLDDSAFDI EGWLADRIAN KFARAEAQSF INGDGVNKPR GFLNHAAVDN
241 DSWTWGNIGY VASGVAGGVD ADDIVDLVYA LGAQYRANGA FVMNSKTAGT IRKLKDADGR
301 FLWSDGLAAG EPARLMGYPV VIAEDMPDPA TDSYSIAFGD FNAGYTVAER PDLRVLRDPF
361 SAKPHVLFYA TKRVGGDVSD FAAIKLLKFG TV
SEQDB ID: 3101377DMP
Reference:
3101377
Name: phage prohead protease, Isotype: HK97 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDMDTGLEHK FARFGDGLTV SEDAVIEGYA SLFGQTDQGG DNVQAGAYAA SLKTLQAAGQ
61 RVKMLWQHDP AQPIGVWDEV REDGRGLWVK GRLLESTQKG REAAALIRAG AIDGLSIGYR
121 TRRASKNDKG QRLLTELELW EVSLVTFPML PSARVAAKGT SPEVEQTWRS IAELFDSARQ
181 ELARR
SEQDB ID: 3101377DMQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMAEGPGYA PFDCAPGLRL EAHERVAALQ HEHLCRRLDQ LDEAIERMER RLWLTVYGVA
61 GAILAQVFQS FLVISP
SEQDB ID: 3101377DMR
Reference:
3101377
Name: portal protein, Isotype: HK97 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIFDFLRRGA GAEAPEAKAS AAGPVVAWHN AGRVAWSPRD TASLTRTGFA GNPVGFRSVK
61 LISEAAAALP LVLQDRMQRY ETHPMLSLIR RPNGAQGRAE LMEALFGQLL LSGDAYVEAV
121 RGADDLPIEL HVLRSDRMRV VPGADGWPVA YEYTVGGKSH RFDAASICHI KSFHPQDDHY
181 GFSPMQAAAM AVDVHNAASR WSKSLLDNAA RPSGALVWTG SDGQGVMAED QFRRLSDEIE
241 ANFQGARNAG RPMVLEGGLD WKPMGFSPSD MEFQKTKEAA AREIALAFGV PPMLLGIQGD
301 ATYSNYQEAN RAFYRLTVLP LVTRVAANLS DWLSGLSGEE VLLKPDLDQV PALAAERDAQ
361 WARVSRADFL TGAEKRMLLG LPALAEDADG
SEQDB ID: 3101377DMT
Reference:
3101377
Name: terminase, Subunit: large
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHQLPPEGD WRAWVILGGR GAGKTRAGAE WVRARVEGSR PLDAGRARRV ALVGETYDQV
61 RDVMVFGESG ILACSPPDRR PNWKASERKL IWPNGAEAQA FSAQDPEGLR GPQFDAAWVD
121 ELAKWKKAGE TWDMLQFALR LGERPQVCVT TTPRNVKLLK DLLAAPSTVQ THAPTEANRA
181 NLAESFLEEV RARYAGTRLG RQELDGVLLA DAEGALWTAE MLDRARTSSV PELDRVVVAL
241 DPSVSGGASG DACGMVVVGA QMQGPPQDWR AWVLADRTVQ GAGPTTWAKA AIAAMDAFGA
301 ERLVAEVNQG GQLVEEVLRQ VDPLVPFKAV HAARGKVARA EPVAALYEQE RVRHVAGLTA
361 LEEQMGQMTA RGYEGQGSPD RVDALVWALH ELMIAPAAAY RRPRVRVL
SEQDB ID: 3101377DMU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGPGQSATQ SSTARAWARK AGGIASTVWR AMVSKWLRSL RMSEIWRWRW REKSPNARQS
61 QRNQSFVKNI SALAVALLRE GLDSPCGFVY KLCHARRDAQ TAPGVTPVAV FSSLSCGDHS
121 RMRSRAHMTL ITPEERISRT AELLQSLENS IRDLRNAAED LQKRIRAGED GDLAGYGKQM
181 GQAASLIREC QKVEASFAEQ VRREAGIAQG GYALDLDRAR SEIGCRLARL RKCCREGAVS
241 E
SEQDB ID: 3101377DMV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSDLNHFET IARQTVDAMP PAFRAHARAV LLCVADWPGP DMLGPLGIDD PLELTGLYEG
61 IPMTEKSVSD FAAPPDTVWL FREPILAEWR DRGDIALDDL IAHVVVHEFA HHFGWSDEDI
121 ACIDEWWA
SEQDB ID: 3101377DMW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDLISKTVA VFVRSFTLPG FGETLPAGEY EIETELVSPP GHLDREAWKA SVLVKLHARA
61 SHPGLARTLS VSLADLDHAR ARDKLTGKAV SDLFLEDMLA DPMVRLVMAA DGVSEAHLRH
121 LYSDARTPRL YTGVLDAGVD SQRARDKMAI QVAENEGLPT RLQQAHGRVQ AGEV
SEQDB ID: 3101377DMX
Reference:
3101377
Name: ORF TIGR00247
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWRALASNML TVLAVGLFLL AGVILWGKSQ YTAQGPLDEA ICLQVKSGSN MTRVSRDLEA
61 SGAVSSGAMF RISARYSEKA TQLKAGSYLV KEGASMEEII DQITRGGASS CGTEIVYRIG
121 VNRLLLEVRE LDPATEQFVE LVEFDPSEGE APAVYAEKRA ERDTRYRLAM AEGVTSWQVV
181 EGLKAWDVLA GEVDELPREG LLAPDSYDVT VGMERAALLA QMQEKQELRI NAAWEARVDG
241 LPLQSREEML ILASIIEKET GVPEERRQVA SVFVNRLDRG MRLQTDPTVI YGITKGKGVL
301 GRGLRQSELR GVTPWNTYVI EGLPPTPIAN PGLASLEAAV NPDTTDYVFF VADGSGGHAF
361 AETLDEHNRN VAKWRAIEAQ QQGN
SEQDB ID: 3101377DMY
Reference:
3101377
Name: 3-oxoacyl-acyl carrier protein synthase, Isotype: II, Class: EC2.3.1.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabF
Sequence:
1 MRRVVVTGLG LITPLASGVE ETWSRLLEGQ SGAGPITRFD AVASGVTTTY ACEVPRGDGS
61 DGTFNPDDWM APKEQRKIED FILYSIAAAE MACKDANWLP EDEEDRLRTG VLIGSGIGGL
121 GSIAETANLI KEKGPRRVSP FFIPGALINL ASGQVSIRHG FKGPNHSVVT ACSTGAHAIG
181 DASRIIRAGD ADVMIAGGGE ACICEIGIAG FNACKALSTK YADNPKAASR PYDADRDGFV
241 MGEGAGIVVL EDYEHAKARG AKIYAEVLGY GMSGDAYHIT APSETGDGAE RSMRAALRSA
301 GLEPSDLDYI NAHGTSTMAD TIELGAVERL LGNHAANVTM SSTKSATGHL LGAAGAIEAI
361 FSILAIRDQV APPTINLDNP AVETPVDLAP NAKRARKIDV ALSNSFGFGG TNASVIFGKA
421 D
SEQDB ID: 3101377DN
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRYSLKRAL SLAISLAVAS LVIFAVIEIA PGDPASFMLG VNAQPDTLAA LRTELGLDQS
61 KAERYVSWVT GMLRGDFGTS YTYRTPVSQM IADRLWVSLP LALYALALST AIALPAGIYA
121 AARRGKPGDL AVMGATQLGV AVPNFWFAMM LVLIFAINLR WFNAGGFAGW DKGLTAGLHS
181 LTLPAIALAL PQAAILARVM RSALLDILGE DFMRTARAKG LTRRQALWRH GLRNALIPVL
241 TIIGLQFSFL LAGSIIIEQV FYLPGLGRLV FQAISARDLI VVESVVMLLV FAVIVVNFLV
301 DLAYALVDPR LRTRT
SEQDB ID: 3101377DNA
Reference:
3101377
Name: HisA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIIYPTMELQ NGRCVTLERG RLDAPMLWHV DPFETVSGWA SAGAEWMHLT DLDAVAGTSG
61 NAELVEQIIR KAEIPVQLAG GMRSRERIEH WIDKGAGRIV IGTLAARDPE LVKELAKRHP
121 DQIVLSVDVW QGHVMTDGWR SQSAYTPEAF IDAFADVPFA AIVVTDIDSD VEEVEAKLGL
181 ISGLAAHSRT PVIASGVVRG ADDISRLAYV PNIAGALVGR ALFRKSLSLE DALSIAASAH
241 ERVAQFQ
SEQDB ID: 3101377DNB
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRSIPILNT GRLRLVGMRP EDFDRYAEIW ADEQVVRHIG GKPRSRGECW DAFLRNEGHW
61 HMTGFGQWGV VLQKTRRLVG QAGFFYSSRD MGPDFDAYPE AGWVLAPEAQ GQGLGREAVA
121 AAHDWFDRVI PGRLVAMIAP DNTPSLGLAQ SLGYRPMREA EFGGRPVTLL RRDGPPARR
SEQDB ID: 3101377DNC
Reference:
3101377
Name: acyl carrier protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acpP
Sequence:
1 MSDVADRVKK IVVEHLGVEE DKVTENASFI DDLGADSLDT VELVMAFEEE FGIEIPDDAA
61 ETIQTFGDAV KFISEAS
SEQDB ID: 3101377DND
Reference:
3101377
Name: 3-oxoacyl-acyl carrier protein reductase, Class: EC1.1.1.100
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabG
Sequence:
1 MFDLTGKNAL ITGASGGIGG AIARALHAAG ASVVLSGTRV EPLQALADEL GERAHVLTCN
61 LSDMAAVEAL PKQAADLLGS VDILVNNAGI TRDNLFMRMS DDEWQSVIDV NLTATMKLCK
121 GVLRGMMKAR WGRIVNISSV VGAIGNPGQG NYAASKAGVV GMSKALAYEV ASRGITVNAV
181 APGFITTAMT DKLTDEQKSG LLTQVPAGRM GSPEEIAAAV LYLASPEAAY VTGATLHVNG
241 GMAML
SEQDB ID: 3101377DNE
Reference:
3101377
Name: malonyl-CoA-acyl carrier protein transacylase, Class: EC2.3.1.39
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabD
Sequence:
1 MTTAFVFPGQ GAQTIGMGKA LAEAYPAAQA VFDEVDAALG EKLSALIWEG DIETLTLTQN
61 AQPALMATSM AAMRALEAEG VAITQAAFVA GHSLGEYSAL AAAGALSVGD TARLLRTRGQ
121 AMQSAVPVGQ GAMAAILGLD LAAVREVAAE AAQGEVCQAA NDNDPTQVVV SGAKAAVERA
181 AEIAKAKGAK RAVMLPVSAP FHCALMQPAA DAMAEALAAV EIKAPAVPLV ANVRAEAVSD
241 PDLIRQLLVE QVTGSVRWRE SVEYMAAQGV TEIWEIGAGK ALSGMVRKIN REIACKPAGT
301 PEDVQKILAG DA
SEQDB ID: 3101377DNF
Reference:
3101377
Name: cytochrome b561-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLTNTPHSY GGVAKGLHWL TALLIVTLLP LGWVADQAAG RATAGGAGAE EIARAAWLFS
61 AHKTLGIALF AVALLRIFWA LTQKRPGLLN ADHRAEALAA ETVHWLLYGA LVLVPLSGWI
121 HHAATEGFAP IWWPLGQSLP MVPKSAALAE LTAVLHRAFL LVLLGALALH VAGALKHHLI
181 DRDATLRRML PGRIDLPMPP KQVHSAAPLL LALLVWLGAF GAGAWVNTHS APHAPAEVQR
241 TALAPVASDW QVSEGTLAIT VTQLGSAVSG SFADWTAAIR YDPRETPGPT GEVTVTIAIP
301 SLALGSVTAQ AMGADFFDAA QFPTADFTAT LHRTETGHEA RGELSLRGAS VPLTLPFDLE
361 LDGDTARMRG TVTLDRRDFG IGANMPDESS LKFPVTVDVS LTATR
SEQDB ID: 3101377DNG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTNGEIFSM KRLTRLVVAN ELSNNHHMRK IHRLFGRVFI EDVFTPRGPV NRKMYINRGQ
61 VEDDLARSAN DTLHIIIFGN SGCGKSWLYK KVFKEKGIFF LTVNLSGASS QQSIAKELVS
121 TVGRRNGTGR VKKAKSHGFS WFITYSETEE LSTELDGHDA FLNALKHCRK LAGRRPAFLV
181 FENLELIFEQ RDLLRELGNI IALLDDDQFA KFDVRIAIVG TPSNIRNYFR SVPRLETIAN
241 RLIELEEIAR LSDEDVARFV ERGFRTLLKY REETNAVNYL IRRAITVTRG NAQRLHEFCK
301 EVALQGQQDR FLSLERIEKG EREWLRRRFH INQTTVASWI VDPARETALM GQYLKDGYVS
361 DLLLQNLYLC ALGLVKEDEF TVQDVTELIQ DELSAHPVTQ KVLRKLEGQI AMRTGSMLAK
421 LADDINGASH PILDRFEPPS GNRIFRFRDM QYQMCLSSMF NVFDNGRRVE INHPSWVSST
481 DDAQQRTSVE
SEQDB ID: 3101377DNH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSTRLAAAL ILAGLASAAT AAPEKYLLDS SHSQVVFSYN HLGYSTTTGM FSGFEGEIMF
61 DKEDPAASSV TVSMPVLSMF TGWQAREDHF FSGDFFGAKD GDMITFASTA IEVTGETTAK
121 ITGDLTMNGV TKPVVLDAVL NQMGDHPMAG KPWAGFDATT TVVRSDFNLG KFAPFVGDEV
181 ELRISVEAMK AD
SEQDB ID: 3101377DNJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGWPHIHAC AAGARGLVRS HLWPHAQVAH DQVPLNYPEP AAFPSQCLSN VNPAGHNPAE
61 NLAQGARPDM HVAQQQTLRN RMPLPSFEET VPLMITFAPN WPLRTVIFRV IGTALVIGAA
121 SMWLLPGSNN GADAALMKLG VSLFFFFCGL ALLMIHHQDN QPDAYFDPIR REVRVLQKNN
181 RGRPQTILRR SYDSLGAARF NEHYLEICDV DGSILMRLPI PSAEIRQALR SQLSGFVTIP
241 T
SEQDB ID: 3101377DNK
Reference:
3101377
Name: ribosomal protein S6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsF
Sequence:
1 MPLYEHVMIA RQDLSNTQAE GLIEHFGAVL SDNGGSLVDH EYWGVKTMAY KINKNRKGHY
61 AFLRTDAPAS AVQEMERLMR LHDDVMRVLT IKVDEHAEGP SVQMQKRDER DSRRERR
SEQDB ID: 3101377DNL
Reference:
3101377
Name: ribosomal protein S18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsR
Sequence:
1 MAAKPFFRRR KVCPFSGDNA PKIDYKDTKL LQRYISERGK IVPSRITAVS AKKQRELARA
61 IKRARFLALL PYAVK
SEQDB ID: 3101377DNM
Reference:
3101377
Name: ribosomal protein L9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplI
Sequence:
1 MQVILLERVA KLGQMGDVVD VKSGYARNFL LPQSKALVAS DANIAQFEAQ KAQLEARNLE
61 TKQEAEALAV KLDGQQFVVI RSASDAGALY GSVTPRDAAE AATEAGFSVD KKQIALIAPI
121 KDLGLHTVAV RLHPEVEVSI NLNIARSPEE AELQASGKSI QELAAEEEAA AEFEIAELFD
181 DLGGAASDDD DQAPASDETA
SEQDB ID: 3101377DNN
Reference:
3101377
Name: transglycosylase SLT domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFTRRALLL TGLALPVAAC GREPEPAATF NPPLYPNETP ELRAAINRWA DHYELPRNLV
61 HKLAIRESTH RPWAVNRPYY GLLQILPATA RTMGYRGGPE GLLDADTNLQ YAGKYLRGAW
121 LLADGSQDRA IQLYASGYYY EAKRRGMLVE TGLRPAS
SEQDB ID: 3101377DNP
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTVDTVVGR RIRARRSALG LSQAELGRAV GVRFQQVQKY ESGANRVSAS RLWAIAEVLD
61 VHISHFFEGI QAPDSGVIDG SDAPVDRLMF LQDRDSVEMV EIYSSLPPAQ KRAVLAFVRT
121 MAVDTQMSGE KVPG
SEQDB ID: 3101377DNQ
Reference:
3101377
Name: autoinducer-binding transcriptional regulator, Isotype: LuxR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: luxR-2
Sequence:
1 MDIVDLGTLP KSEAVYSDFL LQVREKLEMD HAAYAGLNPA AGAIHGYVTY SDEWKLHYQE
61 QGFHMIDPTL HMSQRSIAPV DWSRLERSND FRRVFRDAHD FGIGDQGLTI PVRGPYGDVG
121 LLSVTRECST EEWQKLVRHV IGDLQSLAVH IHDTVMSSDM LGRILYHPSL STREVEILQW
181 VAAGKSQQDI GDILSISHRT VEVHLRSSRE KLCALTTAQA VGRAVGLGLI YPG
SEQDB ID: 3101377DNR
Reference:
3101377
Name: autoinducer synthesis protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIIVIDALNK HLFGGVLDDM FRLRARVFGD RLGWDVTIED GKEIDRFDHL DPAYVVGLDD
61 DGNVVAAVRA LQTTGPHMLA DVFSDILCGE PPIRSATMWE STRFCVDTQR LKRGKDRNSV
121 SYATCELMIG SLEYARRAGI SDIVTVIDPV MDRVLKRSDN APYDYVGQTV PMGKVPALAA
181 LLDTGEERVN RVREFAGIIH DVFLSDEDAL ALFNGAHGEQ ADQPVANADY SPTTPLERYL
241 VEQLQAAGTE EEVKAVQGLI EALAGSLEPS RKQQLLNTPK LVAREA
SEQDB ID: 3101377DNT
Reference:
3101377
Name: trigger factor, Class: EC5.2.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tig
Sequence:
1 MQVTETLNEG LKRGYNIVVS AAELDAKVNE KLVEAQPEIE MKGFRKGKVP MALLKKQFGQ
61 RLLGEAMQET IDGAMNKHFE DSGDRPALQP EVKMTNEDWK EGDDVEVAMS YEALPAIPEV
121 DMSDIALEKL VVKADDAAID EALGNLAETA QDFKARRKGS KAKDGDQVVM DFVGKVDGEA
181 FEGGSAEDYP LVLGSNSFIP GFEEQLVGVK AEEEKDVTVT FPEEYGAEHL AGKEAVFTCT
241 IKEVKEPVAA EIDDELAKKF GAEDLAALKS QIAERLEAEY AGASRAVMKR GLLDALDAKV
301 SFDLPPSLVD AEAKQIAHQL WHEENPEVHD HNHGEIEATE EHTKLAERRV RLGLLLAELG
361 QKAEVEVTDA EMTQAILGQA RQYPGQERQF FEFVQKNPQM QQQLRAPIFE DKVVDHIVAQ
421 AKVTEKEISK DDLQKALEAL DAE
SEQDB ID: 3101377DNU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFARVAPRS SDATRAPRPG ALIWKSDPSP PHQRARNLRF IHLMGKKMIT TLRTTSALAL
61 AAAALAAPAS AQLLYENQSG GSVRLYGQFN PALISVDDGQ QTETQIRDND LSRSRIGLRL
121 AQPFGDNTFR FRFEAGLGLP NSTETNQLGD NFSGWTRDDL RHIDFSLEGD WGKVSLGQGS
181 MAADGIAESD LSYVGVALYS YLADANAGFF FRDTAGVLSG PAVGDALDTF DGSRRGRIRY
241 DSPEIAGFTF SAAYGENILN TADQSDYYDA AVRYSGEFAG GVQLDAGLAY QVRDNNGVDR
301 SDVVGSASVL LKNGLSFTFA GGTRDNDAAG ATDPDYLYFK VAYDVDLFSF GKTGVGVHYY
361 DGSDFNVAGS ETKGWGVGIA QRVEAYNTDV YFTYQDYEYD DAANSYQDLS TIVLGARWRF
SEQDB ID: 3101377DNV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCVFAPISRK SDACPPLDRG RQAQGAVRGS EFPAGAEQER IHILIGSTRI GQFMRAISQI
61 DLGVDAVEIL VDAQADGFRL APGQPEVIAV IVVDRKRGHA RRKKLRLVPG QHIGIIAAVL
121 AAAGGQGKVQ ARLELDRDRA KGVVTIDATA VAARKADTAL DLGSVELACV FQRDVIVFVA
181 VARGQHIGAR SERDRETVEA GRVIAHPALT PAIQVGHDRA DGDPRQRTAG GAELEAARKI
241 ADTVIGGHAV VVQRDVRNPV AGHRPLPHID RAPALAGIGK VDLAQVGPVP IGTLGCVCLA
301 DPTGGAQAKG GLEIELERAL IHGLHHPQAD AAVGMGVIDK AVLALHPVID RLPGGRELSV
361 NLDIAARGIV PLQFRRCRNG RHGSHQRDSR RCFDLSGHVI SPFKRVGVSQ VSIGDWIACF
421 QTSCRQAGFY WHFGNTES
SEQDB ID: 3101377DNW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNAKAAPLAA GGVSYASPDV VPLPEVGFLA GTILLTQDGE MPVEFLSPGD RIITRDRGFV
61 PLHHITRAPQ SVRAIRIAAG SLGDTRPDCD LILPAGQPVL IRDWRAKALF GTAQAMVRAD
121 ALVDGEFICD LGPREMQLFQ LHFDSAHVLY AGGLEVAGQC LPAAGRLAA
SEQDB ID: 3101377DNX
Reference:
3101377
Name: YjeF-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRSESVKGQ GMSELLTAAQ MRAIEQAAIA SGEVTGLELM ERAGRGVVEA IFEEWPELGE
61 AGGPTPQTPW STSGEMKKAV VLCGPGNNGG DGFVVARLLH ERGWAVEVFL YGDPEKLPPD
121 ARVNYERWCQ AGEVQAFAKF EPENWNWQTG EVGAVDLIVD AVFGTGLVRP VGSEMWLHEK
181 IGVLTTEVVN ARRVAIDLPS GLCADSGKPL IDTQDETGRG KLKFELSVSF HREKVGHRIS
241 DGPAFCGRTV VKSIGLDDLP SSRAVARELA SEIVRLAQPR LSDKAAESHK YTHGHALILS
301 GGSGKTGAAR LAARGALRIG AGLVTLGVSP GAQQEVACQI TALMLTRIEG ADGFAAVLED
361 TRLNALCLGP GMGVERARDL VPVALNAKRA TVLDADALTA YAGDPAELFA LLHEACVLTP
421 HGGEFARLFP DIAKRLRKEP KSGPAYSKVD ATREAAKRAG CVVLFKGPDT VIAAPDGRCS
481 VNSAHYLRSA PWLATAGSGD VLAGFVTGLL ARGFAPMQAA ETAAWLHVEC ALEFGPGLIA
541 EDLPEQLPAV FRKLGV
SEQDB ID: 3101377DNY
Reference:
3101377
Name: nitrogen regulatory protein, Subunit: P-II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnB-1
Sequence:
1 MKKIEAIIKP FKLDEVKEAL QDIGVQGLSV VEVKGFGRQK GHTELYRGAE YVVDFLPKVK
61 LEVVLDDDQV DAAIEAIVSA AKTDKIGDGK IFVSTVEQAI RIRTGETGSD AL
SEQDB ID: 3101377DP
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRFVKQGVV SGLALSAALF AGAAWAKDDI TIAMQLEPPH LDPTSAAAQA IDSVVYVNIF
61 EGLTRFMGDG SIVPALAESW EISGDGTVYT FRLHAGVTFH DGSAMDAEDV KFSLDRARAE
121 DSANAQKALF AGIDSVDVVD PLTVKVTLKE PNGNFLFNMA WGDAVIVAPE SIENIKTAPV
181 GTGPYTLGEW VQGDKIVLNR NTGYWGDQPA LAQATFKFIS DPTAAFAAMM AEDVDVFTGF
241 PAPENLPQFE ADPRFQVLVG STEGETILST NNKQAPFDNV KVRQAMAHAI DRQAIIDGAM
301 FGYGTPIGTH FAPHNPAYVD LTGTSAHDPD KAKALLAEAG LPNGFETTLH LPPPSYARRG
361 GEIIAAQLAE VGIKAEIINV EWAQWLETVF KGKDFGLTIV SHTEPMDIGI YARPEYYFQY
421 DNATFQELMG TLNSTTDPDK RTELMQQAQR IISEDYVNGY LFQLAALSVA KAGVQGLWVN
481 APTAANDLSA ISWSE
SEQDB ID: 3101377DPA
Reference:
3101377
Name: Gln synthetase, Isotype: I, Class: EC6.3.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnA
Sequence:
1 MSKDAVLQLI KDEGAEYVDI RFTDPRGKLQ HVTIVSDLVD EDFLEEGFMF DGSSIAGWKS
61 IEASDMKLMP DTESAYVDPF YAEKTICIHC SVVEPDTGEA YDRDPRGTAV KAEAYLKASG
121 IGDVAYMGPE AEFFLFDDVR FSNTINKVSY EVDATDASWN SDAEFETGNM GHRPGLKGGY
181 FPVNPIDEAQ DLRAEMLSTM KRMGMKVDKH HHEVASCQHE LGLIFGTLTK QADEIQKYKY
241 VIHNVAHAYG KSATFMPKPI YGDNGSGMHV NMSIWKDGKP LFAGDKYADL SQEALYFIGG
301 ILKHAKTLNA FTNPGTNSYK RLIPGFEAPV LRAYSARNRS GCVRIPWTES PKAKRVEARF
361 PDPSANPYLC FAALLMAGLD GIKNKIDPGE AMDKNLYDLP AEELADIPTV CGSLREALEC
421 LASDHDFLLQ GDVFTKDQIE GYIELKMEEV HKYEHTPHPV EFGMYYSC
SEQDB ID: 3101377DPB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTVRSLPL RPALARPALS LALSLALALL TSPALALTCG NTGAGFEAWK AEFAKVARRQ
61 GVGKRGLDAL AQARYATRTI AADRNQKSFK YSLEKFMQVR GADTIVAQGR KRKARNPEFY
121 AALERQYGVP AGILIALHGM ETAFGSFMGD SAVVSAITTL AYDCRRSDFF IPHALAALEL
181 VDRSAITGAT KGAKHGELGH TQFLPGNALT YGVDATGDGR VDFYDMTDAL ASTANFLRQK
241 GWQPGRGYQP GEPNFAVIKQ WNAASVYQQA IAIMARRIDS
SEQDB ID: 3101377DPC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDVTVAQTG KYHGGLVFLV NEDGAMDRFS RIVSATLEDY GHAVDRQTLL NEYEARILSS
61 QFLVRLSLQT AVEDGSRARR VDAAAGLNNR LHESKEKVRN RLVISLTPVS EQTDDRDVTE
121 LMLVVMLYRM VDLYTSELIE WLDPNVRLTV DQFLGAFANV SPRRVRSRQQ ILYHQGNRFA
181 PIDDTAPDLA SRYDTIVGQY PHEGETGLVA LTDQEVLALA FRSDPRPDEL DGLSPEEQAQ
241 SDIRRLATWG MTGCLVFVSA PIAVSLAAVN LIRGEDFRLN TQVLSLTAGL VFFQSSGALA
301 NVLSLLPI
SEQDB ID: 3101377DPD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEILQQTLP YDIHAPRPLP GIAPLDPADW LHRDEAFAGQ MARREALMTD RPEAVLALDE
61 GARAAALELL DLVQGLAYPG TGAQVTRPDG VRVTVDRADP LRSLGRLVQE DFCILQKQGD
121 EHVLTGAVLC FPASWTLAEK FMRPLIAIHE PVGSYDAGIA RRVQRLFDGV QTGRPLWRFN
181 ALWYAEAELH QPRSIHDRRS APVPADAGYL RSERQCILRL PETRAVVFSI HTYVLARGDV
241 PLARA
SEQDB ID: 3101377DPE
Reference:
3101377
Name: metallopeptidase, Isotype: family M24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MREHRWKRLT RAIVDRGYGG LLMFDPLNIR YATDSTNMQL WNTHNPFRAV LLCADGYMVI
61 WDYKNSPFLS TFNPLVREQR SGADLFYFDR GDKVDVAADV FSNEVRVLIE AHSGGNRRLA
121 VDKIMLHGLR ALEAQGFEIM EGEEVTEKTR AIKGPDEILA MRCAHHACES AIAEMERFAR
181 ANVGDGKTTE DDIWAVLHAE NIRRGGEWIE TRLLASGQRT NPWFQECGPR ITQKNEVIAF
241 DTDLIGSYGI CIDISRSWWI GDQAPRPDMI YAMRHAHEHI MTNMEMLKPG VMIPELTANC
301 HRLDDKYQAQ KYGCLMHGVG LCDEWPLVAY PDKAVAGAYD YALEPGMVLC VEACVGEVGG
361 DFSIKLEDQV LITEDGYENL TRYPFDPALM GQA
SEQDB ID: 3101377DPF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHSAITPAP ALSRPGPLFA LALALAVGFA LGQVWPEPQD GISAVAPLQE DWHGNVKRST
61 WPD
SEQDB ID: 3101377DPG
Reference:
3101377
Name: osmC-like family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTERITFAG HDGSQLAARL DLPQGPVLAT ALFAHCFTCS KDIPAARRIA ARLAAMGIAV
61 LRFDFTGLGH SEGEFANTTF TSNVGDLAAA ARYLAGRDMA PALLIGHSLG GAAVLRARAQ
121 IASVRAVVTI GAPADPGHVA HHFETALPRI QAEGAAEVCL GGRPFRIGRD FVEDIAASAL
181 QPAIADLRAA LLVLHAPRDE TVSIDNASQI FMAAKHPKSF VTLDDADHLI SRARDAEYAA
241 EVIAAWAGRY VDLAPPAPPP GAPEGIVRVS EADPAGFLQD VQAGPDHHAL ADEPLSYGGT
301 DRGMSPYGFV SAGLGACTSM TIRMYARRKG WPLEGVSVDI CHDKVHAQDA DTGASGKIDA
361 FTRVIRLIGP LDGAQRQRLL EIADKCPVHR TLEASSHIVT RLDEAG
SEQDB ID: 3101377DPH
Reference:
3101377
Name: bioY family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSMTVLADAI GPREGTARLA KQAVLVVLGI AALAIAAKIK VPMWPVPITM GTFAVLTLGT
61 AYGARLGLVT MMGYLLVGAL GFDVFATSSA EKFGLTYMMG GTGGYLVGYL MATVLLGALA
121 ARGWDRSFAK MALALVLANV LIYVPGLLWL GQLYGWDKPI LQWGLTPFLV GDALKLVLAA
181 VLIPGLWKLV GNARG
SEQDB ID: 3101377DPJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLPQDIAEF VGDWLLDRVI DDRLAGQKLR AEGGATLRRS ESGLTYDEQV TLFMPGQPPF
61 HGTRRYLWRP GPGGIAIHFE DGRFFHHLTL GQAEPGDHHD CPPDSYDARY DFGRWPLWRV
121 RWSVNGPRKD YEMVTDFRRR
SEQDB ID: 3101377DPK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGPVGAGHR PSRIAGQGRS GNMRRFALIL AAVPTWAVAD GFMPLAGDEI RAALVGRVLV
61 YEGGARQSFD ASGGTVYVTD RPSLGQWSLR GDLYCSLWPP SDLWACYTVA SDGDRVRFVG
121 QGGDITDGTY AE
SEQDB ID: 3101377DPL
Reference:
3101377
Name: adenylosuccinate lyase, Class: EC4.3.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purB
Sequence:
1 MIPRYSRPEM VAIWSPETKF KIWYEIEAHA CDAMADLGVI PRENAEAVWK AKDVEFDVAR
61 IDEIEAVTKH DVIAFLTHLA EHVGSEEARF VHQGMTSSDV LDTCLNVQLV RAADILLEGV
121 DKVLAALKKR AYEHKDTVRV GRSHGIHAEP TTMGLTFARF YAEMDRNKAR LQGARDEVAT
181 GAISGAVGTF ANIDPAVEEH VCAKLGLRPE PISTQVIPRD RHAMFFATLG VIASSIENIA
241 IEIRHMQRTE VLEGAEFFSM GQKGSSAMPH KKNPVLTENL TGLARLVRMA VIPAMENVAL
301 WHERDISHSS VERGIGPDAT VTLDFALNRL AGVVDKMLIF PENMLDNMNK FPGLVMSQRV
361 LLALTQAGVS REDAYTMVQR NALKVWEERV DFREQLLADA DVVAALGTDG INEKFDMGYH
421 TKHVDTIFAR VFGN
SEQDB ID: 3101377DPM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKGGSALHS SPISTGGEIM TLRTICCAAA LALVPVASLA MGCSSRGHEQ TQSCAPGMQW
61 DAASQACVEV INS
SEQDB ID: 3101377DPN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFPSLLALG LTLPLGAFAA GGDSTGGSTW TNPPKETQTT KECKGVKVWD DKKKRCVAPK
61 NSGLDADTLY DAVRELAYAG RPADAQGVLA AMPDQSDDRV LTYWGFTHRK LGDLDRAAFY
121 YQAAIAANPD NILARSYMGQ GFVEAGKTDL AIAQWREITA RGGEGSWAEV SLREAIRSGL
181 TYSY
SEQDB ID: 3101377DPP
Reference:
3101377
Name: flagellar motor switch protein, Isotype: FliG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliG
Sequence:
1 MGGQPVADAP RRVPRQLSNL EKAAVVVRLL LNAGAEIPLE ELPEELQARL TKQMGQMGLV
61 DRITLDAVAE EFAEALDGIG LSFPHGLAGA LSAMDGKIAA TTAARLRREA GVRQMGDPWQ
121 RLRALPPEEL AEIAQAESTE VAAVLLSKLD TAKAAALLGQ LPGPVARRIT YAISQTGRVT
181 PEAVDRIGWS LAAQLDARPI LAFADRPEKR VGNILNQSAP ATRDQMMSAL DEEDATFASS
241 VRKVLFTFTD IPARLSPRDV PAVVRVADQD QLILALAAAT EGDEAAVAEF LLANMSTRMA
301 DNLRDEIRDK GKVKRSEGEA AMTALVGVIR GLADDGTLQL IDPDEDSED
SEQDB ID: 3101377DPQ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSGPEFLQN SGNPPHGHGQ AGSGALSASH VQHSTSPAPA RLQMTATARQ AIGFMVLAIL
61 CFSLMDASVK ALAPRIGVIP ALWARYAGQM LLVLLLVLPR LRRVMRTAYP RLQLLRSLML
121 MCATGFFFLG ISRIPLTDAT ALMSVNPVFI TLGAALFLGE RLGPRRLLGI ALALTGALIV
181 LRPGSDLFQP AALYPLGAAT CYSTYALLTR RVGPDEDVWT SLFYTGLVGT AVLSLIVPTH
241 WQPPGPTAWG LIALVALFGT LGQLCLIRAF SQGEAAMLAP YAYCGLGFAA IWSALFFGEY
301 PDLWTILGAL VIAGAGLYVW HREMHSR
SEQDB ID: 3101377DPR
Reference:
3101377
Name: lipid A biosynthesis lauroyl acyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVEKSELSR GARASYYAQY LLLRGLIGGM RLLPYDRRIA AMGRLMSAIG PLVGFSKRIR
61 ANLELTCPDL PEAEIARLCR AVPDNAGRAI MEHFSPDEFT RRQQGARVSG PGIAAFDAAI
121 ARGKPVMLIT AHFGHYLATR AALQARGGKP IGCLYRRMAN PFFNEIYVDA FLRTGKPMFE
181 QGRRGMMEMV RSLKQGGIIA IVSDLHAHGG AELSFFGKPA VTSVLNAELA LKYDAVLIPC
241 YSVRQENGLD FEIVMHDPVA HTDPITMTQF LNDDLEKMVR QHMGQWFWIH RRWKPWLDLG
301 AQDEDVPG
SEQDB ID: 3101377DPT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSSTKTGGA SIFVYHCTHG GARCGMQWYT YVSTGSRNLD WRCDRRGGKT GSSPCPAMDP
61 TRMKALTLCL ALAASALPIA ARAEGPVVVE LYTSQGCSSC PPADAIMHRL ARRDDVIGLA
121 LHVDYWDYIG WADEYADPAH TLRQQAYARA GGRSMIYTPQ MIIQGVEDVV GAREEEVLAL
181 IEAHKARPAP VGIAARRVGD DITVTLTPGT GAPGGPYAVQ LVRYTPLRHA SIRRGELAGR
241 EMDYANVVDS WQVVGQWDGR GERRLSLTAT GDLPAVVLVQ QAGPGPILAA ARVD
SEQDB ID: 3101377DPU
Reference:
3101377
Name: aconitate hydratase, Isotype: 1, Class: EC4.2.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acnA
Sequence:
1 MPIKVGQDTA KTRRTLSVNG KSISYYSIPA ATEAGLGDFS KLPAALKVVL ENMLRFEDGG
61 FSVSVDDIKA FAEWGAKGGQ NPREIAYRPA RVLMQDFTGV PAVVDLAAMR DGIKALGGDA
121 QKINPLNPVD LVIDHSVMID EFGNPRAFQM NVDREYERNM ERYQFLKWGQ GAFNNFRVVP
181 PGTGICHQVN LEYLAQTVWT DTDQDGVEVA YPDTLVGTDS HTTMVNGMAV LGWGVGGIEA
241 EAAMLGQPIS MLIPEVIGFE LTGQMVEGTT GTDLVLKVVE MLRAKGVVGK FVEFYGTGLD
301 RLPLADRATI ANMAPEYGAT CGFFPIDDKT LAYMRNTGRD EDRIALVEAY AKENGFWRDA
361 DYAPVYTDTL SLDMGTIVPA ISGPKRPQDY VALTDAKTAF TREMAETFKR PMGKEVAVKG
421 EDYTMESGKV VIASITSCTN TSNPYVMIGA GLVARKAAAL GLNRKPWVKT SLAPGSQVVS
481 AYLEAAGLQE DLDKIGFNLV GYGCTTCIGN SGPIQKELSE AIAEGDLVAT SVLSGNRNFE
541 GRISPDVRAN YLASPPLVVV YALAGTLDID LTSEPIGTDK DGNDVYMKDI WPTQAEIAEL
601 VDRTVTREAF QSKYADVFKG DEKWQAVETT DAETYDWPAT STYIQNPPYF QGMGTEPGTI
661 SNISGAKVLA ILGDMVTTDH ISPAGSFATT TPAGKYLTER QVAPREFNSY GSRRGNHEIM
721 MRGTFANIRI KNEMLDGVEG GYTKGPDGQQ TSIYEASMAY QEQGTPLVVF GGEQYGAGSS
781 RDWAAKGTAL LGVKAVIAES FERIHRSNLV GMGVIPFEFT GGDNRKSLGL KGDETVAISG
841 LDTIQPLQEV PCTITYGDGS EKTITLKCRI DTAPEIEYIE NGGVLHYVLR NLAKAS
SEQDB ID: 3101377DPV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTESDRDQEA SMREVVIVKS TPQRGKFNAF AELVGKLVSE TRDFPGCLGA YLMLAPERNE
61 QVVMHIWETP DALEAYLTWR ADRGDFLEIN EYLEVEQDFK TYQLA
SEQDB ID: 3101377DPW
Reference:
3101377
Name: periplasmic protein thiol/disulfide oxidoreductase, Isotype: DsbE-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARISPLMVA PPLIFGAFVL LAAVGMFRDD PDALPSAREG QAAPPLVLTA FPGAPGFDDA
61 TLRDGKVKLV NYWASWCAPC RAEHPSLEKL AGEGIPVYGI NYKDKVENAQ AFLDELGNPY
121 AALGRDEQGR TALDWGLYGV PETYVIAGDG TIMLRFAGPI TARVIDSTIR PALEKAAAK
SEQDB ID: 3101377DPX
Reference:
3101377
Name: heme exporter protein, Isotype: CcmC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccmC
Sequence:
1 MTISTRLNAL WEYANPRKFL ALTERVLPAL WVLTAITLVG GLVWGFFFTP DDYKQGSTVK
61 IIYIHVPAAF LATSVWFMML VTSLVWLIRR HHVSALAARA AAPVGTVMTL IALITGAIWG
121 QPMWGTWWEW DPRLTSFLVL FLFYLGYMAL WEAIEDGDTA ADLTSVLCLV GSVFAVLSRY
181 AVYFWNQGLH QGASVLRAGA VSGTDTEEKV SNVYAYPLLL CLLGFGLLFV TLVFYRTGTE
241 IRARRIKALI ARERANG
SEQDB ID: 3101377DPY
Reference:
3101377
Name: heme exporter protein, Isotype: CcmB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccmB
Sequence:
1 MIALLKRDLV LAFRAGGGFG LGLAFFLIVT VLVPFSVGPQ SALLSSIAPG VLWLGALLAC
61 LLSLDRLLAL DWEDGTLDLL ATAPLPLEAV VTMKALAHWL TTGLPLVLAA PVLGVLLNLP
121 TAGFVWLVVS LLLGTPALSV VGTFGAALTV GLKRGGLLLS LLVLPLYVPT LIFGAEVARR
181 GAAGMEVATP LLMLAGITAA VIALLPFASA AVLRVNLR
SEQDB ID: 3101377DQ
Reference:
3101377
Name: 3-methyl-2-oxobutanoate hydroxymethyltransferase, Class: EC2.1.2.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: panB
Sequence:
1 MSATARKTAP NAQDIRARKG GVPLVSLTAY TTPMARLMDG HCDFVLVGDS VGMVLHGLNS
61 TLGVTMEMMI LHGQAVARGL DRAMLVIDMP FASYEEGPAQ AFRNAARLMA ETGAGAVKLE
121 GGVEMAETIR FLVKRGIPVM AHIGLTPQSI NTLGGYKVQG RDDQAQAVLA DARAVADAGA
181 FSVVLEKVPA TLADRITAEV AIPTIGIGAS AGCDGQILVV DDMLGFFTAF KPKFVKRYAD
241 LGPLAEAAIA EYAAEVRARS FPAAEHVFGD QAPAKGAKA
SEQDB ID: 3101377DQA
Reference:
3101377
Name: heme exporter protein, Isotype: CcmA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccmA
Sequence:
1 MTLTVTDLAI ARGGIPVLEG LSFTLTPGRA LILRGPNGAG KTTLLRTLAG LQPPLAGRIE
61 GAEDKIAYAG HSDGLKPTLS VTENLLFWAA VFGGRDITPA LEGFALGDLA DRHAGNLSAG
121 QKRRLGLARL LVTGRPIWML DEPTVSLDRD AVAMFADTVR AHLGQGGSAL IATHIDLGLD
181 AEVLDVGPYR ARPAPLDDPD GDFL
SEQDB ID: 3101377DQB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTEVTYSD ARPVDGYGPG FFRVGGVVHH GALLTGPAGP GPWAGYQDAS PLLALAGQVD
61 VLFIGTGAEV AHIPQPLRHS LEQAGFGVEA MTSPAACRTY NVLLGEGRRI ALAALPV
SEQDB ID: 3101377DQC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDPLFALSTP EIALLITAAF LAGCTRGFAG FGTALIYMPL AGVVLGPVAA ITTLVLMDIV
61 GPLPMLPRAA RHVDRGDLAR LLLGAMLALP LGLFTLFLLD PGVFRLLVSG VSLSMLAGLV
121 LGWRYHGALR PGAVTATGAA SGFLGGVAGL PGPPVIFVYM ASAKPAAAIR ANITFFLFGY
181 DWMVLAMMGL AGRLDPAWIV TGLALIVPNM LGTVLGTALF VPGYERAYRL AAYGLILFAA
241 LAGLPFWTLG E
SEQDB ID: 3101377DQD
Reference:
3101377
Name: protein export membrane protein, Isotype: SecF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secF
Sequence:
1 MRLKLIADDT SFDFFSRWRI WLGISALLVL VGFASFLIQG LNFGIDFRGG TTVRTESTEA
61 VDVGLYRGAL DPLGLGDITI TEVFDPTFGP DENVAMIRIQ AQDEAEAVKS ETIAKVQEAL
121 RSVAPDIKFV SVESVGPKVS GELIQTAILA VTLAILAVLV YIWLRFEWQF ALGAVAALVH
181 DVVLTIGIFS ELQIRFDLAI IAALLTIVGY SLNDTVVVFD RVRENLRKYK QKDLKEVLNL
241 SINETMSRTL MTSITTLLAL VSLYVLGGDV IRGFVFAMIW GIIVGTYSSI FVASTILLWL
301 GVKRDWSKPT NTSGNQFADI DA
SEQDB ID: 3101377DQE
Reference:
3101377
Name: protein export membrane protein, Isotype: SecD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secD
Sequence:
1 MLQIDTWKRV LIWLVCIGGL VLALPNAFYT RVEQSNDARA AIELRGETPE LTATAAQWPD
61 FMPSSLVNLG LDLRGGAHLL AEVKVSDVYA ARMDAMWPEI RNSLRDARDT VGTIRKQPSK
121 PDEIRVKISQ PEGMSRALEL VRGLARPIQT LTGAGSNDIE VRGEGDEVIV TLSEAERLAT
181 DDRTVRQALE IVRRRIDEVG TREPTIQRQG ADRILIQVPG IGSASELKEI IGTTAQLTFN
241 PVISRGTDAN ARVGVGEKLA PSLDQEGVFY TIEAAPVVTG EELVDAQPAF DQNGRPAVNF
301 RFNTSGARKF GDYTRDNVGA PFAITLDGEV ISAPVIQSHI PGGSGIITGN FTVEESTNLA
361 VLLRAGALPA GLEFLEERTI GPELGQDSID AGKVATVVAF VAVLGFMWAS YGLFGIFANI
421 ALIVNVGLLF GLLSVIGATL TLPGIAGIVL TVGMAVDANV LIFERIREEL KTAKGPARAI
481 ELGYEKALSA ILDANITTFI TAVILFAMGS GPVRGFAITL GLGILTSVFT AIFVTRLLVV
541 TWFERRRPKT IEV
SEQDB ID: 3101377DQF
Reference:
3101377
Name: pre-protein translocase, Subunit: YajC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: yajC
Sequence:
1 MQCHGSAHRF PEISRGCSPS LSTKECPMDG GAIAQFLPLI LIFAIMYLLL IRPQQKKVKE
61 HQAMVSALRR GDQVITQGGL IGKVAKVKED GEIEVEIAEG VKVRVVKSTI AQVLNKTEPA
121 N
SEQDB ID: 3101377DQG
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRSLIVLLL TALMLAAPPA LAQQTTPGDT ATQPSLLAPV IVDGERLFVL RGASGLPAER
61 RAAEVVERIE TLADGSTATS VAITTKDSDF GIVILADGVE IVTVTPADAS MERMQIETLV
121 AVQSSAIRAA ILNYRAARTD SARRESAVQV LAWTAGFALF TILGIWLRRR LNRWCTRLVR
181 RYFARLETAT NAQVQADAIA ALIRFGFSFV LLALFFLGIY YYLSLVLLSF AETRYVAHLL
241 LTYVTTPVLN IVFGFVSYLP NLITLVIIAL ITRYVIRGLK VFFDAVEAGS FDLGDFERHW
301 IGPTFNILRV LVVMIALVFS FPYIPGSDSA AFQGLTILVG AMLSLGSNSV MNNIISGLFV
361 IYRRSTSIGD RIRVGEHVGD VVQIKLMETH LKSIKNEMIS IPNAQLLNSD VINYSKHIDG
421 NGLLVYTTVG IGYEEPADKV EAMLIEAAGR TKGLKARPAP FVLWAGLADY AVNYQINAYT
481 TRGAIIPKIT SDLHRNILDV FTENGVQIMT PSYVADPPEP KIAPAGWDGV LAHQRKES
SEQDB ID: 3101377DQH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMMVRCYLAP SEIEGLGVFC HDDIARGDKV WRHDKMLDIT FPESKLDSVE PHVKEFLERY
61 SYPDINRPGY LILESDEGRF MNHSMYPNLD FADGIWGVAL TDIPAGTELT CDYADFLTGV
121 IHMQPPRHKV TAPSVTFS
SEQDB ID: 3101377DQJ
Reference:
3101377
Name: Ser-tRNA synthetase, Class: EC6.1.1.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: serS
Sequence:
1 MHDIRAIREN PAAFDAALSR RGSAPVSSDI LALDEARRGK ILAAETAQAD QNKASKEVGA
61 AKARGDEAEF ERLRALVAEK KAEIAAMQAE AKELDTQLSE LLAGLPNLPA EDVPQGADEA
121 DNVELHRWGT PREMDFAPKE HFDLASVQDG MDFETAAKLS GARFVLLSGA VARIHRALAQ
181 FMLDTHSEQN GLTEVNGPVL VLSEMMYGTG QLPKFGEDSY QTREGWWLIP TSEVSLTNIV
241 NGSTIAEDYL PRRYTAHSLC FRSEAGSAGK DTRGMLRQHQ FEKVEMVSVT HPDHSDAEQK
301 RMLRCAEGIL EALGIPYRTI VLCTGDMGFG ARRTYDIEAW LPGQNTYREI SSVSTCGDFQ
361 ARRMNARFKP ADGGKPQFVH TLNGSGLAVG RCLIAVLENG QNADGSVTLP QALAPYLGGK
421 LTLNTDGTLN
SEQDB ID: 3101377DQK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAPRLLYIQ CIVLDAGGKG SSDMTPVKDI EGVGPALAKM LAENGFDSAE AVAAVSVERL
61 MELPRVGALR AKAIHAAAQA LVAAAKPAAR GATPAPARKP AGRTPRTRRP VAGRAASGKK
121 PASAVTKAAT APAAVPAPKA APAKPAPSRD EASEAEIRAG EAAALAELAE ADAKTKKKAK
181 AAAKAAKAKQ KKKDFEEKIR KAEEKVKKKS GKKKDKKKDK KKAKKKAKK
SEQDB ID: 3101377DQL
Reference:
3101377
Name: fatty acid desaturase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLRTYTRQY AVQDNRLASL SYFGTFAVYF TALYLAITYV GHWYVLIPAG VVFAFAAVRL
61 YVLQHDCGHH SLFETRNQNE IAGHVLSPFT FAPFEVMKQN HNLHHAGVGN LEHRETGEIH
121 TMTLREWQAA GWRQRLVYRL YRNPFILIPL GAAFTYFIRY RWPKNATRFG ARGVVLHNLS
181 IVAFLTLLWA LAGMTGFWVW LGFSFLGGML GVFLVYLQHN FEDTYWDRRP DLDPQLAALQ
241 GSSALDFGWW FDTAVACITL HDIHHFNARI PSYRLRGCHY NLPPEYAPRR IRFAEAVAAL
301 NLKLWDEEAR CLVPFPKRAG RVAVVTG
SEQDB ID: 3101377DQM
Reference:
3101377
Name: GTP-binding protein, Isotype: EngA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: engA
Sequence:
1 MSLTLAIVGR PNVGKSTLFN RLVGKRLALV DDQPGVTRDL REGQARLGDL RFTVIDTAGL
61 ETATDDSLQG RMRRLTERAV DMADICLFMI DARAGVTPND EIFADILRRR SAHVILAANK
121 AEGAAADAGV IEAYGLGLGE PIRLSAEHGE GLNELYAVLM PLADEMEQQA EEQAPETDVD
181 LDPEDEDGEE VAAPHAITRE KPLQVAVVGR PNAGKSTLIN RILGEDRLLT GPEAGITRDA
241 ISLQIDWNDT PMRIFDTAGM RKKAKVQEKL EKLSVSDGLR AVKFAEVVVV LLDAAIPFEQ
301 QDLRIADLAE REGRAVVIAV NKWDVEENKQ DKLRELKESF ERLLPQLRGA PLVTVSAKTG
361 RGLERLHDAI LRAHEVWNRR IPTAALNRWL IGMLEQHPPP APQGKRIKLR YMTQAKTRPP
421 GFVVMCSHPD KMPESYSRYL VNGLRADFDM PGTPIRLTLR GQGDKNPYKG RRKKNAGALA
481 KHLKSRG
SEQDB ID: 3101377DQN
Reference:
3101377
Name: PQQ enzyme repeat family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSALLLLSA CAEPEVILPG AREDIRPGAT DAVVNQGRAI RLPAQQANSA WAQAPGTEAF
61 RTAHPALRST PQLVWSTPIG SGDEKRQRIT ADPVVAGGLI YTLDSAARVS GVTPGGGLAW
121 QTDLVPPGED EGQATGGGMA YADGILYVSS GYGLLTALEA KTGTVRWQQK LNATGSGTPT
181 IRDGLLYLVA GDDTGWAINI KDGRIAWQVQ ATPSVGNVLG APAPAMTPDL VIFAFGSGDL
241 IGSFRQGGVR RWGASVSGQR KGRAAARIGD VTGSPVIQGK TVYAGNHSGR TVAFRADNGE
301 RLWTATEGAL GPVWPAGDSI FLVSDRSQIL RLDASDGSVI WAQDLPGFIK DKPKKRGASY
361 AHYGPVVAGG RVIVASNDGY LRLYNPEDGA MISRVEVPGG ATTGPVVAGN TLYVVGAKGQ
421 LHAFR
SEQDB ID: 3101377DQP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKKNAGSPP LGLPGGPGYE RPEPEKVRTT GQGPGMSDTD SFIDEVTEEV RRDRMFLLLK
61 RWGWIGGLAV VAIVGGAAWN EYSKAQATAK AQGLGDAVIA ALSANDAAAR AEALGAITPD
121 STGGAAVLAL LTAAADSGKG DTAAAVARLE TLAAQGDLPP VYRQIAAFKA LLLQADTLPV
181 SDRRQQFEAL AQPGAPLRLL ALEQLALIDI AEGDTEAALA RLQSIREDAE VSTDLQQRAT
241 QLMVALGADP APLPSRQG
SEQDB ID: 3101377DQQ
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLRNGPGRV FPLGGIEERH IMRLVPFLTA ILVTVTLYML VFERDALMAF AKAESTTQAA
61 PETPPAADPV GAAIAETATI GVVVLRSQAS EIDSAVVLRG QTRAMRQVEV RAETTSTVIS
121 EPKRKGSFVK AGDLLCELDP GTRPASLAEA RARKAQAESS MPEAEARLDE AKARLKEARI
181 NDNAAQKLAQ TGYASETRRV ATEATVRSAE AGIKAAEAGL ETSRASIEAA AAAVDAAQRE
241 IGRLTIMAPF QGLLESDTAE LGSLLQPGAL CATIIQLDPI KVVGFIPETE VNRVQVGALA
301 GAELATGLQV QGRVTFLSRS ADETTRTFEV EITVANPELL IRDGQTATIA ISSDGAKAHR
361 LPQSALTLNN EGELGVRVVR EGNKVGFVPV ELVRDTPTGI WVTGLAEQAD VIVVGQDFVT
421 EGVTVTPTWR EVSE
SEQDB ID: 3101377DQR
Reference:
3101377
Name: AcrB/AcrD/AcrF family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGIVDWAAS RARMVLAFIA ISLLIGGFAY VNLPKEGEPD IEIPMLFVSV SFPGISAEDS
61 ESLLVKPMET ELADLDGLKK MSATAAENYA GVALEFEFGW DKTAITADVR DAMNTAQASF
121 PDGAEQYTLT EVNFSEFPIV IVNLTGAVPE RTMARIAKDL QDDLESLDAV LEAGIAGSRD
181 EMLEVIIDPL RLEAYNVTAL ELINVVQNNN QLIAAGEIES EQGSFAVKIP SSFKTARDVY
241 DLPIKVNGDR VVRLGELAQI NYTFEDRKGT ARFDGESTVA LQVVKRKGFN LIDTVEQVKA
301 TVAKSRAAWP PELQAAVQMG TSNDQSRVVG SMVSQLEGSV LTAIALVMIV VLASLGSRAA
361 LLVGFAIPTS FLLCFAFLAA MGVSISNIVM FGLILAVGML VDGAIVVVEY ADKRIKDGIG
421 PMHAYVEAAQ RMFWPVVSST ATTLCAFLPM LFWPGVPGEF MGMLPVTLIF VLSASLVVAL
481 IYLPVMGGVS GRISRVFNRM SDWLRARTPW WVRAALVPPA LYGMFLGAMQ LLNPAYLLPG
541 GTLVGALLFL MSAFAASVTL GAARIEMPQR RVAAPGGHTP FGHVIKFIAG NPVMPIVSIL
601 AVTFAVYQVV FVIFPERALG IEFFVESEPE QATTYVRARG NLSLAEKDVL VRQAEEVIAA
661 HPAVINVFSF AGEGGLDQNN GGAQAPADTV GQIQFEIIPW EDRPTETHPL TGWLGSRMSA
721 WLGFEEEVVA AEYDGDFVLE QLSNELAKLP GMVAEIEALG RGPASAKPVH LRIKGDDWNT
781 LLATTAQARA AFEETAGLIK IEDNLPLPGI DWQIDVDVAK AGRFGADVAT VGAMVQLVTR
841 GVLLGEYRPA DADDEIEIRV RLPEQDRVLS TLDTLKVRTP EGLVPLSNFI TRKPVEKLAK
901 INRVDQKRYF DVKADVEPGL FKLTPDDDTQ AVLAVLRTLP DGVAPTGEVV TRPADGAQFH
961 IESLDGFDSA AAARNAVAAG SVRFAPINAN ERIATLTQWL ETDPFGPAVE WEWTGDQEDE
1021 KESQEFLLKA FVAALGLMFI ILLAQFNSFY NSVLVLLAVI LSTTGVVIGM MVMGQPFSVI
1081 MTGTGIVALA GIVVNNNIVL IDTYQEYSRY MPRIEAIVRT AEARIRPVLL TTITTMAGLT
1141 PMMFGLSLDF INGGYSIDSP TALWWKQLAT AVVFGLGIAT VLTLVVTPSL LALRVWASTY
1201 LVMIWRGLAR VTAGRSSRIA RDMILRRSAK RLKATEIIWD PMQAEPPLIA AEQSLKAAE
SEQDB ID: 3101377DQT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHESQLSFP QRRAIVAKSC KDQGKKASSW GKRRGTTPMF NKTITAAGTA LSALVLTATS
61 AAAQTYDYYY WWWGGWSYGG GGGTSSSVPE IDASTGALAL AAVAAGLLLA REMRRRKSR
SEQDB ID: 3101377DQU
Reference:
3101377
Name: CAAX amino terminal protease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGCGRVTRID PALRHQFYKL MVLFALEMLA IVLIFQVFSS VECRLTGIET ACRALRSATI
61 RILCVGIGLG LFIWFRPNLR RRLVTAADTA NGEARRWWAV HLIGLGLIFV PWLRADSASL
121 NADFQAHLVT LLAGAVLAAI GALFLLVPRR EMSTLLRDGG GGLALVVLVA ALIPDLADAL
181 APLWWAFRGL ILVTFYGVAV VLAVLGFHVV LSPETATIGT EGFFVEMAGS CSGIEGFALT
241 AGFFAIYSVL MRDTLRLGRF WLIVFPLALL VSWLFNVLRI AVLIMIGARI SPELAVNGFH
301 SFAGWLFFTV LALGVIWVVQ ARPALHREAE VAEVAPESGA RMPFREDPAA ALIAPFIVFM
361 LSGLLVQSLW QAPAQGYPLQ AALMAAVLWL FRKPLLALDW RLDPVALLGG AVVGVGWILS
421 FRGGPAPEGV SQLTGAALTG WVLCRVLGTT LLVPVIEEGF FRGYLLQLLG GRSAWQTALA
481 VGVTSLAFAL LHGRVIEAGL AGLIFAGIAL RRGRLGDAIL AHAVANGLIA LTALLTGDWS
541 LI
SEQDB ID: 3101377DQV
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding/permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRRLAHTAP ADQTASSERR SGLRTLRRVA PYLWPEGEGW VKRRVVAALA MLVLAKLIAV
61 YTPILYKGAV DALAGEGVPP LALGAVGLTV AYGVARMLTV GFQQLRDALF APVGQRALRA
121 LALETFRHIH RLSMRYHITR KTGGLSRIIE RGVKGVEFLL RFMLFSIGPL ILELVLVAAI
181 LMYLFDVWYL AVVVGTIALY IWFTFAVTEW RVKLRREMND QDTEANQRAI DSLLNFETVK
241 YFGAEDREAR RYDQSMQAYA RAALKTSYSL AFLNFGQSFL ITCGLIGVMV LAALGVQRGD
301 LTVGDFVMVN AYMIQITVPL NFLGTVYREI RQALVDMGEM FDLLEQPAEV SDKPDAAPLK
361 VSGGEITLTD VRFGYEADRE ILKGVTLSVP AGQTVAIVGA TGSGKSTIGR LLFRFYDVTG
421 GALCIDGQDI RDVTQTSLHD AIGVVPQDTV LFNDTIRYNI AYGRENATQA DVEAVARAAQ
481 IHDFIASLPE GYDTKVGERG LKLSGGEKQR VGIARTLLKN PPILLLDEAT SALDTETEQE
541 IKEALALAGE GRTVITIAHR LSTIAEADKI VVLEKGEIVE QGTHDALLSR GGRYAQLWTR
601 QQAGEDEAA
SEQDB ID: 3101377DQW
Reference:
3101377
Name: lysM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGETGTAGL GGIGWAVVAG GVLVAGVAGL YFGGVIGGRQ DPAVPVPVVA NVPQVSEEKE
61 ENPAVAAVEP TGEAKPDPAP EAAAAPASEP ETTAEAATPE PEATAEAPSE AAPEAPAAAP
121 AETAELPAAL GAPVLDQIFV EPDGTALLSG SAPAGARIAV LLDGAPLHEF EVPRDGKFAE
181 FLTVPFSAAA RALTLRAARD GQEALSGDYI VAALPAPQPV EVAEATPEAQ PEPVEVKPEA
241 QPVETAEVAP APAAAASDAE PAPATDTARA EASAADAAET PANESAEAAA PAPAPAPEPV
301 ETAEAPAPAP QPTAPQETAE ATAEPAVPVA TEQAASEQPA TDQTTTEQTA EQQTAEAPQP
361 AAAPEEPARV AVLRSDESGV ELVQPAQQPE TVEAQRVALD TIGYNDAGNV RLAGRANVGS
421 LVRAYFDNRA VADMTADALG KWRGEIGDIA PGVYTLRLDE LDAQGVVLSR LETPFKREAP
481 EVLRPAQPES DPSAPQQPPV RAVTVQKGDT LWAISRERYG DGVLYVKVFE ANRDAIRDPD
541 LIYPGQVFTV PE
SEQDB ID: 3101377DQX
Reference:
3101377
Name: decarboxylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVKSVCIYC GSRAGAMPAY AEAARRMGAL LAEAGWRLVY GAGDVGLMGE VARAAQAAGG
61 QTFGVIPVHL LRREVGKTDL STFVVTETMH ERKKVMIMNA DAVVVLPGGP GSLDELFEAL
121 TWRQLGLHDK PILVMNVDGY WDPLRALIER TVDQGFADAS LADYLTWVDT PETAMAALRA
181 ALS
SEQDB ID: 3101377DQY
Reference:
3101377
Name: RarD protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rarD-1
Sequence:
1 MDERGRGILA MIGTCLVWGL SPLYYKLLAH VPPPEVLSHR TFWSVLLFGV YLAMQGRLGE
61 LRRAYAGPRQ TGLIALAAVM ISLNWFVFIL SIQLGHATEA SIGYYIFPLI AVLIGRFWFA
121 ERLSGGQWLA VVLAALAVAL LTWGLGVAPW VALILSSSFA LYGAVKKFLP LGPVISVTAE
181 IVIMMPLFLA VLAWFHLRGQ GAFGGDLATS LLLIGSGPLT AIPLILFSYA ARRVPLSTVG
241 VLQYINPTLQ FMCAVVIFGE PFTRWHGMAF ALIWGAVAVF SLSLIRQDRA ARRAAMAVSG
301 VSTQVR
SEQDB ID: 3101377DR
Reference:
3101377
Name: pantoate-beta-Ala ligase, Class: EC6.3.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: panC
Sequence:
1 MSAPILRKLA DLRAATAGWK RAGESIGVVP TMGALHDGHL SLVAAAKAGC DRVVVTIFVN
61 PKQFNNPEDL AKYPRTELAD ASKLAPYGVD AIYVPDPDQI YPEGFATTVS VSGLTDVMEG
121 ACRPGHFDGV ATVVAKLFLQ TGADQAYFGE KDYQQMMLVT RMAQDLDIPI TVVGCPTVRE
181 ASGLAMSSRN MRLSAEGLER AGRLHPVMRQ VAERLAAGAS FGDLAPGARE ALGAAGFVDI
241 EYFDLRAADS LRALDRPTEP ARLLVAAWLD GVRLIDNIAV SQLND
SEQDB ID: 3101377DRA
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNEMSQDGLL GEVLSEGVLT LTLGRAPAHP LSRAMIAALH DALRRAMGDD HVHVLVIHGP
61 GRIFCAGHDL KEIGRHRADP DEGRAFVTDL FEACSALMLD LAHCPKPTIA LVEGIATAAG
121 LQLMAACDLA YASPAARFCL PGVQNGGFCT TPAVAVSRVI GRRAVTEMAL TGATYDADWA
181 LAAGLINRIL PEAALATHVA DLAGALAARN QAPLRRGLET LNRHLELPLE QAYALATPVM
241 VEHFMDPGRR HLDWID
SEQDB ID: 3101377DRB
Reference:
3101377
Name: Fe superoxide dismutase, Class: EC1.15.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sodB
Sequence:
1 MAFELPDLPY AHDALASKGM SAETLEYHHD LHHKAYVDNG NKLIADTEWD GKSMEEIITG
61 TYDKSAVAQN GIFNNISQLW NHNQFWEMMG PGESKMPGEL EKAIAESFGS VDEFKSQFSA
121 AGAGQFGSGW CWLVKNADGS LAVTKTENGV NPLCFGQTAL LGCDVWEHSY YIDFRNKRPA
181 YLTNFLDNLV NWENVASRM
SEQDB ID: 3101377DRC
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFTGLRKMAY RARGYYAGAL NGEPFRLDPY HSKFWRRATA GGWEPETFAV LDQYLSPDRD
61 YVDIGAWIGP TVLYAARRAR HVWCFEPDPV ALRHLLWNLE LNDIRNVSAF GVALSDGFGL
121 ARMASFGGEA GDSMTSLLAS GNHGTEALTI GWDQFAQTVD LTDVSLVKMD VEGAEFGVVP
181 TLSDWLRAHR PAFYLSTHAP FLEEAARPEA MAGLARALEF YASATDEAGA PADLTAPEAQ
241 SRFCSFLFSG
SEQDB ID: 3101377DRD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKITTIALS LALPATSVLA KNDKVLSEEY ICETKSYSNI GWIPPKICFA MDRSSGAAVV
61 YDGYIKEIYG DVIQADLKKR SDDLWEFRWE LKDAHYSNSP GSTDVEYKAT LNTRKASVNI
121 SAIHSGMDGD ALRGQGKCER GKKK
SEQDB ID: 3101377DRE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIKVDRKKL RTNMKMVATV IAAITGLAGM QASAAQAYDC KLDSNQDYGW IPPRVVFVVD
61 EPNVQVMDGI IAMVQEGPMA GKLERRDATS IQIEWSVKNI PVSNLRMKEH AVYTAVLNEK
121 TGKVRLRAVL ATQYSSYPKG WGKCAIGKE
SEQDB ID: 3101377DRF
Reference:
3101377
Name: Sar oxidase, Subunit: gamma
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKPVSALMG AAYDGIVRVE ECGLQGMITL RGDLASKPVM AAATGATGQD MPGQRRAKVA
61 GQSGLCWMSP DELLVLVPHG EVGDKLAAMT KALGEAHSLA VDVSDARAMF RVSGAHSREV
121 MAKLAPVDFA PGAFGPGDFR RSRLAQVAGA FWMEEDGSFC IICFRSVADY VFKLLKVAAQ
181 PGSAVGAF
SEQDB ID: 3101377DRG
Reference:
3101377
Name: Sar oxidase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTRLAKQGR LIDRSKQVTF TFNGTTMRGF QGDTLASALL ANDQMMMGRS FKYHRPRGVV
61 ASGAEEPNAL VGLGEGARFE PNQRATTTEL FDGLKAASQN HWPNLDFDIG AVNTYLSRFL
121 PAGFYYKMFI HPAPFWKHVY EPIIRRSAGL GKAPDKELVD ADTYEHFHVH TDILVIGGGV
181 AGLQAAKVAA SSGARVLLIE QTAHWGGRAP VDGGTIDGLS PDEWVSRTLA ELEAMDNVTL
241 RARTMGAGVY DHGYALGYER VADHTPGVPG PRHRLWRIRA KQIVSATGAI ERPLSFAGND
301 VPGVMLAGAM RDYVVNWGVT PGQRVVVATN NDDAYRTAII LKQAGVDVLR ILDARKEGGG
361 ALADEARALG IRVDPGKAIA KVKGGKRVKK ISICNQDGVG GAREEVEADA VAMSGGWSPV
421 VHMWSHCGGK LIWDRANAHF RPDPDRPPLG ADGKGYVVAA GSANGPLALD QVMADADAAG
481 KAAAKAAGFS PKRTKVPEGV ATGENAMEAV WLMPANAEVQ LRMKSWLDFQ NDVKVSDVQL
541 AAREGYESVE HTKRYTTLGM ATDQGKLSNI NGLAILADAL NADIPQVGTT TFRPPYTPIS
601 MGAIGGEARG EVFQPVRKTP IYDWSNANGA DWEPVGQWRR PFAYVRPGES VHDAVNREVK
661 NTRENLGLLD ASTLGKLIVK GPDAGKFLDM LYTNMMSTLK PGKCRYGLMC SENGFLIDDG
721 VVARIDEDTF LCHTTTGGAE RIHGHMEEWL QTEWWDWKVY VANVTEQYAQ IAVVGPKARK
781 VLEKLNAKAG GGMDLSVEAL PFMEWRDGRI GEFDARAYRI SFSGELSYEI AVPASQGLAF
841 WEALVDAGKE FGVMPYGTET LHILRAEKGF IMIGDETDGT VIPQDLGLHW ALSKKKDDYL
901 GKRAQERSHM ADRDRWKLVG LETVDGSVLP DGAYAVGEGV NANGQRNMIG RVTSTYYSAN
961 LGRGIAMGLI QHGPDRMGEI VEFPGTDGKS YKAKIVDPVF YDKEGAKQNV
SEQDB ID: 3101377DRH
Reference:
3101377
Name: Sar oxidase, Subunit: delta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLILTCPYCG VAADETELAA GGEAHLKRFG PGASDDELHG YLFSRENPKG VHLERWRHAS
61 GCGKWFHAAR CTATLEVFGT YSAQVSGPPQ EIRDAISAKR PGWSWREFS
SEQDB ID: 3101377DRJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSFRRKLCL PRSREGSVMA YSETLAETMR ADLGVEPGLS EKKMFGGLCF LLHGHMVCGV
61 TRDGAMYRPG KAQEGAALAL GAQPLSFTGR PMGGMVELDA GAFEDAALRS RLTEMSLAHA
121 ASLPPKEAAR
SEQDB ID: 3101377DRK
Reference:
3101377
Name: Sar oxidase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGGHGISAT KSRTGSDSPM KHYSAFAVAR EALRYHTGWE RAWRSPEPKK RYDVVIVGAG
61 GHGLATAYYL GKNYGIQNVA VIEKGWLGGG NTGRNTTIIR SNYLQDPSAA IYEKARSLYE
121 TMSQDLNYNV MFSPRGVMML AQTQHEIRGY KRTAHANALQ GVKTEWITPE RVKQLVPIIN
181 LHGPRYPVLG ALWQERGGTA RHDAVAWGYA RACSAMGMDI IQQCEVTGVR REGGQVVGVD
241 TTKGSIDCGK LGVVVAGHSG QLAEMAGFRL PVEALALQAL VSEPIKPCMD VVVMANTVHG
301 YMSQSDKGEM VIGGGTDGFN NFTQRGSFHH IEETVRALVE TFPMISRLKM LRQWGGIVDM
361 TGDRSPIISK TPLGGCFINC GWGTGGFKAI PGSGWAMAQL MATGHSPLAE AFSLDRFKEG
421 RFIDESVAAG VAH
SEQDB ID: 3101377DRL
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CycH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycH
Sequence:
1 MTFWILVTLM ALTVAALLAL SMLRARVAAE PAAAYDLRVY RDQLAGVDRD LARGVIDAGD
61 AERIRTEISR RILAADAQMR AEVEGGGQSL RKAGLGALLG AVVIVGGTMA LYSRLGAPGY
121 GDLPLQLRLD IAEANRTDRP GQGEAEARIP AHPAPQLDPG YAELLGKLRD TVAQRPDDIQ
181 GQMLLAQHEA NTGNFAAAYA AKGRVIALLQ GDASPQDFTE QAEMMIRAAG GYVSPEAEAV
241 LFEALRRDPE YGPARYYWGT MLAQIGRPDL AFNTWARTLQ TAPAGTAWGE AIREQIGELA
301 MRAGVNDYTP PAPPAGTALP GPRREDVEAA SEMDAETRAE MIQGMVTRLS TRLATEGGTP
361 QEWGRLIGAL VVLGDTDRAR AILDEARQVY GESPEALVLI ESAAQRAGLG E
SEQDB ID: 3101377DRM
Reference:
3101377
Name: ORF TIGR00250
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MICETVEEFA AALPPFSALA GLDLGDKTIG VAVSDRMRGV ATPLETIRRK KFGLDASALL
61 AIVEQREIAG IVLGLPRNMD GSEGPRCQST RAFARNLSRL TEVAITFWDE RLSTVAAEKA
121 LLEADTTRKR RSEVIDHVAA AYILQGALDR LRNL
SEQDB ID: 3101377DRN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDMVWKRNE VDSPCIRICV VHPTERICTG CYRSIDEISR WSKMQPEERR AIMEELPDRA
61 PQLRKRRGGR AARQAQE
SEQDB ID: 3101377DRP
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTVLILLGT ALTVGTIAWA IDENDDDDGG SGGEGEPTSD REFSGTDGHD LLQGNDLANW
61 INGGTGDDTL SGAGGDDSIF AGSGNDSADG GTGNDVLRGK DGDDTLTGGA GDDLLHGSTG
121 LDVLSGGAGT DTLQGGFGGD RLFGNSGDDS LDGGAGSDLI FGGDGNDSAD GGTGDDVLRG
181 QGGDDTLSGG DGADLLHGST GLDHLYGDAG SDTLLGGYGG DHLSGGAGDD SLDGGVGPDV
241 INAGEGNDTA LGGTGDDRLS GQDGDDSLSG GDGADLLRGG LGRDVLLGGN QNDTLLGGYG
301 PDSLYGEAGN DSLDGGTGGD LLDGGTGEDT IMGIVGRLGN AASGIQDELD RDTIIGGAGD
361 DELWLGSGDQ ATGGGGEDTF VVGPWMQQSA VARIDDFNTV TDQLRIEVPT GSSGEVTIEE
421 DPDTSGVALV LYDNVIVAQI DNAYPGLTVA DIQVVENDDL VAAA
SEQDB ID: 3101377DRQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVEAFLRRGW LRFPFDPVLA AWVDHVLPAA RHAVRDPAHA QWLDCEGTWF IGVDALDNDE
61 TGRVGDGPPL AGQAIDFITR HLGMLPLHRG QVSVTYPGYP RPRQGEGEVA FRYRLNRGAA
121 HVDGLKPEGT DRRRHVDEPH GWILGLPLSA AAPEAAPLIL WEGSHRILGP ALARAMAGHP
181 PEDWHRVDVT EAYQAARRVV FETCPRIAVH ARPGEAYLLH RHCLHGVAPW AEDLDAGPDG
241 RMIAYFRPEL PGGVSDWIAL P
SEQDB ID: 3101377DRR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDTMLLLQM LALLIVIGAF AGVLAGLLGV GGGIVLVPAF FYAFQTLGYG GPQLMQMCLA
61 TSLATIIVTS LRSVLSHNKK GAVDWQILRG WGPGIAVGAV LGVMVAASLR SVALQALFGV
121 LGIVIGAYLG LGRAHWRLGE AMPGGLRRMV LSPIVGFLSV LMGIGGGSFG VPLMSLYNTP
181 IHRAVATAAG FGVIIAVPSV LGFLLLQIDP AQRPPLTVGA VNLVAFGVVI CMTLITTPWG
241 VKLAHAMDPK PLKRIFAVFL TLVALNMLRK ALGW
SEQDB ID: 3101377DRT
Reference:
3101377
Name: transcriptional regulator, Isotype: IclR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADDGEREGA IPTNLRLLLV LEAMAEAGVP VTPTEVNERL GLPKPTIHRL FTTLENEGFI
61 QREIDGRGYS PGRRMRKMST GILSSLRIRT ARIAILSKLA EEIGETSNIA IPDRDAMVYL
121 DRVETKWPLR IQLPVGTRVP FYCTASGKMY LSSLDRRHLR NYALSAQLDP HTKRTITDPE
181 ALIDEAIQAR ERGYSTDNEE FMEDMIAVAV PILEGNGRMV STLSFHAPVQ RLAMPDAIGH
241 VERLKTAARR LSELLSEGEP IAADSRAE
SEQDB ID: 3101377DRU
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDGNWTILI SVGVTFLFML GVPVFLVIGY WVIGMSLVLG LPLINTGSAL ADVFTDGFAL
61 LAMPLFILTG DLINRSGIAR RLSDFAYACL GWLRGGLAMA SLGACGLFAA ISGSNSATTA
121 TIGSMLHPEM VKGGYDERFS AATAAAGGTV GIIIPPSIIF IVYGFLMNLP ISELFVAGII
181 PGAMMVGGMM LVAFFICSRN KWGHLIRLEL ARVLKTGLGA WLGFFAIGLV LWGIYTGKFS
241 PTEAAGVTVG FCIIVGFVSL PIHALMGRPS EERDFRERGI SEYLVVQGFS PLELPSITMR
301 SAQITGILAP LIAVSVVMQQ ILSVLGAQEI IGDFVRGMGG YYAVLFTSMA IVFFAGMVLE
361 SLPVTIILAP ILAPIAASVG VDPIQFGVIF LVGASIGFIT PPYGLNLYVA SGVTGVPYFR
421 LLRYTVPYLF ALLSVWIMVA LLPALSTILI PSG
SEQDB ID: 3101377DRV
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLLGSALFL AIYHYFPWVE RKFEATVMVS TYLLIGAIIF VEVFRRFVLN VQAPWSTTLP
61 PFMFLIMTWA GCAYNVKLRT HLAFAEFRSN MPRPLQFLCL SLDALLWIGF AWIVIVTSTQ
121 VAANSAANFQ ILLGTDNVLQ WWFLVSVPLS FILIAARALE NWLEDLRNYR DGSDLIAAVS
181 IGAD
SEQDB ID: 3101377DRW
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKVSDKLSGV SRRDFFRVAG RFGLSSTVLG LGGLTGAVTL PSLAAAAEST YDKRFKKEAK
61 HTLKFGAAGF NARNLLIERA GCLEFARDLE ERTDGEIRVE FIGDNQICGQ LSCVEKTQNG
121 IVDIYAASTQ NSAGGAPYLN VLDYAYVFPG RASQYHFLYS PESNAILRDP LEKRHGLKFL
181 FSHCELRGLQ MGKSFADKPT VTKLEELFGT KNRVTGTQLG RIAMQLLNLN PVPVAWEETL
241 DGLKTGLIDG AETWASAVAY ANMSPVVSQS VDLRFFCGTE HTSMSAKVFD SLDGYLQDAV
301 MESAYLAQVH VQAANEAALV KTVGFSDPVL PGTLFDEHDV RPAFLAEDQI KMAEEMCSPE
361 YNPEPWAQWR ERLNNWSGGI DTYAELHRVA REVPADMKPE NVEPRRWWKG
SEQDB ID: 3101377DRX
Reference:
3101377
Name: oxidoreductase, Isotype: GMC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTKQADYIV VGGGSAGCVL ANRLSKDPAN RVVLLEAGPR DWNPWIHVPV GYFKTMHNPS
61 VDWCYRTEKD KGLNGRAIDW PRGKVLGGSS SLNGLLYVRG QPEDYDRWRQ MGNEGWGWDD
121 VLPLFKRSEN QERGPDAFHG TGGELSVSNM RLQRPICDAW VAAAQNAGYP FNPDYNGATQ
181 EGVGYFQLTT RNGRRCSSAV AFLNPARKRP NLEIITKAQV SRVIVEDGRA TGVRYFDGSG
241 REQTITCSRE VVLSSGAIGS PQILMLSGIG EGEQLKANGI EVIHDLPAVG KNMQDHLQAR
301 LVFKCNEPTL NDEVRSLFNQ ARIAAKYALF RSGPMTMAAS LAVGFMKTGP HVDTPDIQFH
361 VQPWSADSPG EGVHPFSAFT MSVCQLRPES RGEIRLNGND PREYPRIHPN YLASDLDCRT
421 LVEGVRIARR IAREDPLKAK ISEEFRPAKE LGLDDYEGTL DWARNNSSSI YHPTGTCKMG
481 RGSGTVVDAR LRVHGIRGLR VADCSIMPEI VSGNTNAPAI MIGEKASDMI LEDHV
SEQDB ID: 3101377DRY
Reference:
3101377
Name: sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRRAQVSVG RIVFLALFCM SLGALAIGFV SVYGAQTFRQ EFERLVDEDL PQATVATRLN
61 AEILGLTSLV GLLVSADTEI AAATTLIQLQ DQLGAIERQS RDLSGFTLRP GEYSDIETAL
121 AQLTENLDSL VALNTLRLRS EAGMIALSER ATEAPASPDA RLAFLLWRQE LDAANWAREL
181 HGLGQKLDAL LAPDQTHPLA VIGHEMLAMR RTLLETETVL RGRLKNHIQL SYRLSDSTRF
241 MSSRLISGAN QRGDAILSLV RTNMYLILIS FLVFATISAF IYTFLDKQVV GRVQKLTQRI
301 RAYEGSGRAP DPVGRNEITL IETAFSNLTA TIAEREGRLV ALNRLASDAR LEAEEANRSK
361 SELLAAASHD LRQPVHAMGL LIGGIDRSAL DAASCETLDQ LARLTQETMQ LFNSILDLSK
421 LQAGTFTAAQ EPIRLAELFG RIEAAFGKRA ELAGATLDIA QPASDLCVLG DDQALYRILG
481 NLIANAIQYA GGGHIRLHCE IGEESCIITV EDDGPGFVLD GDKPDISGPR QSRAGYGLGL
541 SICFALAQAM QSRMTIDRPE TGGVRFSLPL PLVEADEGQP GALPDPSVGI TALDGVRIIL
601 LEDDPEVRAA TLQSLRRLKC DVTDCASRED ARQLISQQAG PFLLITDLDL GRGHQVCSFV
661 DEALETAAGL AGVIVTTASP AAVPEAWRRT GNVAVLEKPF SVSRLVRLVR FLAKPKNTVS
721 DT
SEQDB ID: 3101377DT
Reference:
3101377
Name: glycerol kinase, Class: EC2.7.1.30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glpK
Sequence:
1 MTFILAIDQG TTSSRAILFD GEMRRVATAQ REFTQHFPEA GWVEHDAEEI WQTTVEVCRE
61 VIAGQGIGPE QIAGIGITNQ RETTVVWDKA GGAPVHRAIV WQDRRTAAIC ERLRHAGCED
121 DFTAQTGLLL DPYFSGTKVK WILDTVPGAR DRAAAGELLF GTIDSFLIWR LTGGRVHASD
181 ATNAARTLMF DIHQGEWSKD ICELLDVPMS MLPEVRDCAA DFGTTDLFGG QVPILGVAGD
241 QQAATIGQAC FQPGMMKSTY GTGCFALLNT GTQPVASQNR LLTTIAYQLD GQRTYALEGS
301 IFIAGAAVQW LRDGLGIIEN AAQSGALAAR ADPAQNVILV PAFTGLGAPY WKPDCRGAMF
361 GLTRNSGPAE FCKAALESVA YQTRDLWEAM QGDWGADADV ILRVDGGMSA SDWAMQGLAD
421 RLGAPVDRPV MQETTALGAA WLAGMRAGVY PDQAGFAATW ALDARFTPKM VEGDREAAYR
481 RWKAAVAAAM MV
SEQDB ID: 3101377DTA
Reference:
3101377
Name: AA ABC transporter, Subunit: periplasmic AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRFRGALTL GLWLAGALSA QAGEGDTGAA IRDRGYLLCG VGSDDLGFAT LRFDGEWTGF
61 DVDFCRAVAA AMLGDATAVE FVPLDSLNRL EVLARGEVDV LFRTTTFTFD RDVNAALEFP
121 AITYYDSQKV LVYADTGART LSDLAGKTVC ANSGTTSITN IRHRIDSLGG GIGIQEYASQ
181 AGRWRAFFGR ECEAVTADGS DLAAMMASRP GYRDDFVLLE DEIANEPLGP VVREDDRQWE
241 QIVRWVINLT LVAETAGIGQ VSDPEEIARL ALPAGADLGV VDTWGAEVIR QVGNYDDIFR
301 RNLGDGSELR MERGRNALWT DGGLMYPLPM TPP
SEQDB ID: 3101377DTB
Reference:
3101377
Name: Ser(phospho) phosphatase, Class: EC3.1.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: serB-1
Sequence:
1 MTKFLAIPGE KGASATCFAD FVNHAGASAG LAHGAMVASS SAHVFDMPPI VSAPVGERAR
61 LRAMAARQGM DICFLRGNPV KRKLLVADME ATIILDEMLD LLAEDRGQGA EVAAITARAM
121 AGELDFAQSL AERTRLLAGT PLAQLEGLCQ RIRLAPGARA LVQTMRAAGA RTVLVTGGYG
181 IFAQEVAWLC GFDHVVANNP VIEAGVMTGA LTLPICTAET KREVLLAECA ALGIGPEMAC
241 CIGDGANDML MLRACGLPVS YRGKPVVQDI VDLDIARGDL TAALFAQGFA ADEIEGR
SEQDB ID: 3101377DTC
Reference:
3101377
Name: AA ABC transporter, Subunit: periplasmic AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNKETLVIL AAAAAAMATG AHAGKLDDVR AAGELACGVS EGVPGFSNPN SEGVWTGLDA
61 DICRAVAAAT LGDANAVRFV PLASKQKVLA VSSGQVDMTS RTTTWTMKRD SAEGVDFTSV
121 VYYDGQGFMV RADAGVTSAR ELDAATVCLT TGTTTELNMA DFARANGLTL EPVVFEGKRE
181 AVEAYASGRC DALTTDASQL AAFRAGFADP SEHKILPEII SKEPLAPFVA HGDNQWKDIV
241 TWVVYGLITA EELGVTQANV AEMTASSTNP NIQRLLGTSG DTGGFLGLNS TWMVDTISAV
301 GNYGEIYDRN LTATLGLERG VNALWTDGGI LYAMPVR
SEQDB ID: 3101377DTD
Reference:
3101377
Name: AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVNPDMPSSK KTAAWSPGSL LSQGGVLVVV IAILYVLFSN TQENLAIRGI ESGFAFLGHE
61 AGLPIGDSLI DYSPTRSYGY AFLVGILNTL FVSVLAIVFS TLLGIVIGVA RVSRNWLLAK
121 GAAIYVETLR NLPLLLTLFF IYTVVLAALP HPRDAIALSE GVFLSKRGFY LPRPVAEDGI
181 GLFLGASAVA LVLAVMFWRW AKSYKVRTGR SVPGLRGGLA IFLALSGLAF LASGQPLTSE
241 LPVYKGFNFK GGLSIKPEFA SLLIGLVLYT AAYVAENVRS GIQSVHAGQI EAANALGVSS
301 GVVTRMVLLP QALRVTIPAT TNDYASLVKN SSLAVAIGYP DMVSVGGTII GQNGQAIEII
361 AMWMAVYLTI NLIISLGMNM LNARVQLVER
SEQDB ID: 3101377DTE
Reference:
3101377
Name: AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCSLLKGNAM SQDTILFQPM AARPAPASQI GPIAWLRANL FGGWKDTAIT LSLLAVLLAV
61 VPNLIEWLLI NATFLGDDET CRQNAGACWP FLQAKFQVLM VGVYPQDLSW RPAIAALALL
121 VLAGFTYADR IRGIALIVAW AVLPIFALIM IGGAFGMQEV DQSLWGGLML SVLLALVGVI
181 VSIPLGVLLA LGRHYGSPAV KAICVAFIEL VRGVPLITIL FMASVMMPLF LPPDLVINNL
241 LRIQIGMILF SSAYMAEVVR GGLQAIPKGQ TEASLALGVS PARTIIFVVV PQALRHVLPP
301 LIGRCIALFK DTSLVIIVGL LDFLGMVRGA ALDPEWLGFQ AEAYVFAAFV YWLICYSLSL
361 YGRALERRGP AGSKR
SEQDB ID: 3101377DTF
Reference:
3101377
Name: AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVKIESHIA SGETVIEMQK VNKWYGEFHV LKDIDLTVSK GERIVICGPS GSGKSTLIRC
61 INHLEEHQEG TITVNGTVLN ENMKNITHIR REVGMVFQQF NLFPHMTILD NLCFAPVWAR
121 NMPRDEAEET ACRYLERVGI GAQKDKYPGQ LSGGQQQRVA IARSLCMNPS VMLFDEPTSA
181 LDPEMIKEVL DVMIELADTG MTMICVTHEM AFARSVADRV IFMDGGEIVE ENTPNAFFDN
241 PQVDRTQKFL SQILSH
SEQDB ID: 3101377DTG
Reference:
3101377
Name: Na/Pi-cotransporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQIVGSVALM LWGIRLVRTG FIRAFGGSLR HYLGLAISGR LTSFGVGLAI TVFLQSSTAT
61 ALIISSFASK GLVQTPAALA VMLGADVGTS ISAQILSFNL SWLAYAAILI GFFLHGRGGR
121 FATRQIGRAI VGLGMVLLAL SLIRMSSQPL READGLAYVL SALEGEVLLT LFLMAVLTWL
181 VHSSLAVVLL TASLASAGIV PTGTGLVMIL GANIGGTIPP IIATLSTGPQ SQHAALGNAG
241 FKLLASLLVL PFLPWVGERL QSFGGDAQVL VNFHLTFNLL VATLFLPWVQ TAAALLARVF
301 PDTGAGAVEP VTKYLDKELI TSPALALTSA TRELYRVNER IEDSLALLSG GIAARDQVDV
361 QGAQENRARV AAMLEEFKFY LTDITREEIS ESDSAKAMNL LLIATNLGHV SELVTNAVEL
421 TASTSHEQIR FSEAGTAELL EMLELIHQGI RLALSAALLG DAKVRKTLQK GRKELERMVD
481 ESRQAHFSRL AEGTLSSIST TSLHNELLRD FSRIYYHIYT ASKIGGRDSS VMIRG
SEQDB ID: 3101377DTH
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVVLIVDDH HLIRAGAKNL LEGAFSGMRV EGAETVSDAL AFLEADNTVD LILLDVNLPD
61 AEAIDGLVRL KRFDPSNAVA LISGETDHEL IRAALEAGAD GFIPKSADPQ VLIHAVSLIL
121 EGEIFLPRSY LQGGRMAEVA TPLDSSERPE QNLTPRQRDV FELMCKGLAN KEIARLLDLS
181 ESTVKSHVSA IFKQIGTTSR SKTIAIFRQE GVALPSASED
SEQDB ID: 3101377DTJ
Reference:
3101377
Name: Na/Ala symporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHDRAVNGQQ TRDIMNTPIK AAALAAPMAM LSAAPVLAQS VDEKVNQIFA NSTGWFVNFI
61 FSPFPGTSFP WIVMWLVIAA TVFTLYFGFI QFRAFPHSIS LVKGDYSDPN DAGEVSHFQA
121 LATALSGTVG LGNIAGVAVA VGIGGPGATF WMILAGLLGM ASKFTECTLG VKYRNEYADG
181 TVSGGPMYYM TKGFKERGLP AGGFMAILFS IFCVLGALGG GNMFQANQAH AQIANVVGDF
241 PGWITGFIFA GIVFAVIVGG LKSIASVTEK VVPFMGVLYV ATALVIILMN ADMIGWAFGQ
301 IFAGAFTGLG IAGGMVGALI QGFKRAAFSN EAGVGSAAIA HSAVRTKEPI TEGFVSLLEP
361 FIDTVVICTM TALVIIITGQ LVSDPNTGLY LLDEGASTIQ TVDGNKGVAL TSAAFSSAFP
421 FFKYILAIAV ILFAFSTMIS WSYYGLKAWT FLFGEGKTKE LTFKIIFCLF VVIGASANLG
481 PVIDFSDAMI FAMAVVNIMA LYLLMPIVKK ELDSYLSRLK SGEIKKFG
SEQDB ID: 3101377DTK
Reference:
3101377
Name: universal stress protein family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTKFVVGYD GSAASRRALD FAMERAKAGG ASIIVAHVLE WSPYSFLTPT EIEERHKRRA
61 EEMARAETAI LAPLKAELAG SGVEIETAIR YGQVADTLCD IATKSGAAQI FIARQGESGL
121 AARVFGSVAG TLAQYAPVPC TIVP
SEQDB ID: 3101377DTL
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGLDKKILS VLQQDGQISM AALSERIGLS LSACHRRVKL MEAEGIIRNY AAQIDRQTVG
61 LEVQVFIEVK LNSQRREDLE AFEKAILSMP EILECHMITG EFDFLIRVCV HSPADYEALY
121 RSSLSAIPAV SQMKTLLSLS TVKEFRGYHL R
SEQDB ID: 3101377DTM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAYVTVGAN DIARAERFYS AFLPALGYVL ERYHGDLSYI LPRQAGQSFA PPDFYVKSPF
61 DGGAAVPGNG NMTAFEASGQ AQVRALHAAA LAAGGADEGQ PGFRDAYGPH FYVGYLRDPD
121 GNKIALFSSN PADPGRDG
SEQDB ID: 3101377DTN
Reference:
3101377
Name: tRNA-dihydrouridine synthase, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERKSQNIVP WRMSCAPMMD WTDRHCRYLH RLLSRQTLLY TEMVTAPALV RGGALHLLEY
61 SVEEHPVALQ LGGSDPEELA QAARLGAEAG YDEINLNCGC PSDRVQSGTF GAVLMKHPGL
121 VADCVTAMRE AVDVEVTVKC RIGVDDQDPE TVLPEFLEQI AGAGCQRVII HARKAWLQGL
181 SPKENRDIPP LDYDLVHRMK ARFPGMHISI NGGIDTLAAA RAHLDAGLDG VMIGRAAYHQ
241 PADILCKADP LIYGTGTASD PVTAVRAMLP YIEAHLATGG RLHQITRHML GLFAGRPGAR
301 GWRRMLSEGA VRPGAGPELV EAALDQVAGL WHTSETPLDP APRL
SEQDB ID: 3101377DTP
Reference:
3101377
Name: CoA-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEADIDHIY DYDPSYIADI LKSVKTIAMV GASADKTKFS YGVLRQLSEI GYDILPVNPN
61 PNVSEIRGLK VYHSLEEIDQ PVDMVDVFRP KEELYGFAEK AIAIGAKVLW GQIGVYDDKA
121 AALAEDAGLK VVMNRCPKIE LFRPFWKPRL DLEI
SEQDB ID: 3101377DTQ
Reference:
3101377
Name: ferredoxin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTHTVTIAN REGASFQVNA RRPLLEQLRD QGVDLPYGCE YGGCITCAAK LTAGEVDQRR
61 QVALNNRQIA NGYVILCVAR ATSDITLEIG VESHDTLYRN PFLDPLQPHE LKADIATPRP
121 SIGDALEQTK ES
SEQDB ID: 3101377DTR
Reference:
3101377
Name: Se-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MECCGPGYAS PQAAIEAPRE KLLYTIAIYT GTGIQKPDYL ATVDVDPDSP TYSQVIHRLE
61 MPGIGDELHH MGWNACSSCH DDGSMSRKYL ILPGVRSNKL HIVDTATDPR APRLHKVIDG
121 AEIKAKADLS GPHTVHCLGS EIIISFLGDA KGEAPGGYLH LNKDFNIVGR WENSMGDIKF
181 GYDFWYQPRH NVMVSSEWAA PNTFMPGFDL EEVGHLKYGR ELHFWDFEKR EPVESFYLGE
241 DGLLPLEVKF HHNPDSTHGF CGAALSTNVI HWWKDGAGKW QWEKIIDVEN EMHPDWPIPL
301 PGVMSAILVS MDDKYLYLNN WLHGDMRQYD ITDPHNPKLT GQVFMGGLLN KAPVVNGVEM
361 AGGPQMFQLS LDGRRLYVTT SLFSTWDNQF YPEIREKGGV MVMIDCDPEN GGMKINPDFI
421 VDFGKEPNGP SRCHEMRYPG GDCTSDIWL
SEQDB ID: 3101377DTT
Reference:
3101377
Name: acyl-CoA dehydrogenase, Class: EC1.3.99.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDLTLPTSP WMDEELLMLS DACAQFYERE CLPHYEEWEA QGSFPRDLWL KAGEMGLLGA
61 EVPEDYGGLG GSFAHDAVIA YQGNLAGIDG WGGGLHNSIV IPYLIHYGSE DQKKRLPPRM
121 ISGDLIGAIA MTEPGAGSDL QNIKTTAVKD GNHYRISGSK TFITNGALAN MIIVAAKTEP
181 KVGGRGISLF LVETDGLEGF RRGRNLDKLG MKSNDTSELF FDDMRVPASA LLGAEEGQGF
241 VQMMQQLPQE RLLIGVYAVA RIERVLRVTL NYVAERSAFG KKLADFQNTQ FVLAECATEA
301 TIAKTFLDAC ISEHLEGNLT TEKASMAKYW LTDLQAKIID RCLQLFGGYG VMSEYPMERM
361 YRDNRIERIY AGTNEIMKLV IARGLLRD
SEQDB ID: 3101377DTU
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLTQLQYFC GVVEHGGFIS AARELSVAQP ALSRQISDLE KELECQLLER GPAGTKVTAS
61 GQRFYSRAKN VLEQVNLARA DAKSGTDMLT GQITMALPVG MASHLAAPIV KNVSDAYPGI
121 SVRIEDGLGY ETGQTIDAGK VDFGLLANVG NLQNVSIEPV FEEYLFLFSK RSGEPDTSDI
181 DLIELQNLPL IMPNRKVNVR RALENSMMKI GGQLTVAYEQ QSLLTIRSMV KAGIGSTVLN
241 WPSMADLWFS GDLDARRIVN PGLSRTVCLA VPTNRPLSSA ATAAYDIVRQ TLIAEVKEGN
301 WRGGVMLKDI N
SEQDB ID: 3101377DTV
Reference:
3101377
Name: tricarboxylate transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPIKKLLGA ALVAGLSVTA GVQVAAADEY PTKPIEMIIG FNPGGFSDAM ARKLSEPLTE
61 ELGQTIVHTY MGGAGSSIAA TAVKEKPADG YTLVVGTSLT FGFNPLQGEV AYTKEDFDYL
121 LTMARFETSF VSLADKPWTD LTSMLEHAKE TGIPLKFGSL GPADRLQIDA ITKATGVTII
181 PLPIKGGANM MQSILGGHVD FGLSGGPHVQ YVKSGEMIVL AASGSEPLNA TPDAPTMSSL
241 GYPAVSYNSV IAAPKGLPED VRAKLEQALL DAANSGEFQE LVQGRFVGIT PMNGAETAAS
301 IDAISAAMEA VMSDSGS
SEQDB ID: 3101377DTW
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLTNRNIAS IVIAVLSGFA LWLLPDHVRG DNRLFGSNGT LLPALALAII LGLSALEVLQ
61 SLLAARRSRM PHAEDVAIGR AALFGMLLVT LLAGVFAVLL RPVGYVPVAL LLVSALMVGT
121 GGRRPLVVLA VSAVAVAILV VGLRFGLGVH LQLWPSANLW GG
SEQDB ID: 3101377DTX
Reference:
3101377
Name: tricarboxylate transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRLTMDALL AGIQNAFALG PLLAIAAGVS IGIFMGAVPG LTAAMAIALL APITFGMDPL
61 TAVAFLIGIY KGGTFGGSIS AILLNVPGSP EATATAFDGY PLSKSGRAKQ ALQMALFASV
121 CGAILADLML YAVAGPFSKI ALKFGPAELT FVVLFAFTFV AGLTGGSLAR GLIACAFGVL
181 CAMVGLDPMS ASPRMTFGIV ELLDGLPLIP IAIGMLGLAE VMVAAERAFL RRKEVSSDTE
241 SSPISATSGP HLSLPEFARH WKTVLRSSLI GSAIGALPGI GASLAAFIGY GTAQKYSKTP
301 EKFGKGTLDG VAAPEAANSA VVGGSFVPLL TLGIPGNVTT ALLIGTFLVH GIEPGPHVFK
361 TEPALIYGIF TILFVANFFN LAIGLMGSGL YAHIVKAPEY VSYSIIGLTC MTGVFASTNS
421 IVSLYIMIIF AVIGYLMKKF DYSFVAFLIG FVLAPEFEVS FRSFLLVAQG DPLGLLMTRP
481 IALAFCLLTI VAVLRIVWSE HQRRTRSATS LKNTPDPSSG QKNP
SEQDB ID: 3101377DTY
Reference:
3101377
Name: benzaldehyde lyase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNAHTRIRGG ALLARALKEK GVEHAFTLAG GFCNPALEGF MECQMPIINC PHEQVAGHLA
61 DGHSRITRKP SVCLVGPEGF ANAVPAMLEA WGERTPVIFI TGSSTLKRQG AGGFKEIDDV
121 AIAAPLTKYS VQITDGSRIS EFVDRAWQAA TTGYPGPVHL SLPVDIMFSS FEEDAGRNER
181 PFDRSDKPVP RAWPDPAQLD VVLGLIRNAE RPVIIGGHGT WWSGGEEALA RAGETLRIPI
241 FNVPYHTKML GEGCDAYMGL ADFHQYHPSK PAIHEADVVV MVGCRLDNQM NFGNPPFIQP
301 ETKLICVNGS HEELDYNIGA DVPLLSDPGA FLTALEGLKK TWEPWLDLQI QRRRDWVREW
361 SDHIAAETAT DEAEGRKMHP LQLALDVQEA MKDGDWLVFD GGNTHFWNEI ATNIAAARGR
421 VLGGILHPGN YSLLGVGVSF ALAAKNLNRD KTTVLVTGDG AFLSGGLSIE TCFQENIPIV
481 VVVDNNGGLD CISQQQERLF SNRQHYATDF RDIPFHSMFE GLGGHGELVT RRADLAGALE
541 RAIASGKTAC INVKCRGVIS PIVAATSDKR DKASIE
SEQDB ID: 3101377DU
Reference:
3101377
Name: monooxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVLIAGAGI AGLSLGLTLH QIGVPFRIYE ATAVLRPMGV GINLQPNAVR ELLDLGLEAE
61 LDRIGVRTRQ LGFYSKLGKT IWEEPRGIWA GYAWPQYSVH RGALQMMLYE ALIARAGADC
121 VVTGARAAGF ETGPESATLI LSDGRRVEGR LLIAADGIHS ALRAQMYPNE GEPIWNGRVL
181 WRATTRAPAY FGGGAMAMIG HDDLRLVSYP ISEPDGDGMV EMNWIAEKRF PLDAAWKKED
241 WNRAADIGDF LPDFADWRFD WIDVPALIQG AEVVYEYPMV DRDPLPRWTG GSVTLMGDAA
301 HPTYPVGSNG ASQAILDARI IGARLLEHGI TPRALAAYEA EVRPVTTAVG QANRAGGGPD
361 GVLQRVEDLC GGDFDDIDTV IPHAELAAHA ARYKSIAGFS IEELNARPRT IAEGARIPA
SEQDB ID: 3101377DUA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATVSSHILN AVDGTHAAGV AVRLINLGTG ETLFDTMTDA GGRLKEVVSR IDRDAEYELT
61 FDVGAYWVAR GIAPRMREIV LRFGMPDDDG TYHSPIIASP NGYSVWTSE
SEQDB ID: 3101377DUB
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLAPDIAEKL KTISGPKGWL GGPDTARYNE DPRGRVTGAA ELILRPDSAD KVSHILKTCN
61 DTGTGIIPFG GGTGGANGHL DPCGRHVVLS LERMSRIRSV SASDSAITVE AGVKLCDIHA
121 AADGIGRVFG LSLASEGSCT IGGNLASNAG GVRTLRYGNA RDLCLGIEAV MADGSVLSSL
181 APLRKDNTGY DLRHLLIGSE GTLGIITAAT LKLSPATQSR DTLFCAVPSP GAALDLLNTL
241 RDQLGEVVTA FELMSALGLS LALKHFPTLR DPFRDRHDWY VVADIAGPRA LSDWLEAALA
301 QAFEAGLIKD AVVAASGAQA ADLWALRENA FEYNKLEGVL YSSDTSVPLG QIGDFIDRTA
361 RDLAEWDSSL RANFYGHIGD GNIHVNVFAP ENARQVFLEH RPDAAARIAD IIDTATLDCD
421 GSISAEHGIG RAKVDALKRH GDPVKLAMMR HIKQALDPNG ILNPGAVL
SEQDB ID: 3101377DUC
Reference:
3101377
Name: translocator protein, Isotype: LysE-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWEAWISLV LVAGVAIVTP GPGNLNTLRR AVELGYRSAI FSVMGNAAGL MVLGAATGIG
61 LLAMLIASPG AWALFQWVGI GFLLFLGAQM ILTSSHVCTA STPASRRTRF HLFAEAAGVS
121 ALNPKAALFF VAIFPLYTDP DRPMPLQVFL IVATCLSISV MSHALYILLA HQMRPHLSRP
181 ASYRAFRLCS GLVMLGLALW LLMQNVAGTE VAG
SEQDB ID: 3101377DUD
Reference:
3101377
Name: molybdopterin-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQSTRKGSI MSKQTRELLT STHWGTYRVE VKDGKVTALR GFEEDPDPSA IGPGIVDVLD
61 GPTRITAPMV RKGWLEGGPG AAGDRRGADD FVEITWDEAN RIVANELDRV RKTHGNRAIY
121 AGSYGWASAG RFHHAQSQLK RFLNCIGGFT GSKNTYSFAA AEVVVPHILG DFRTYIDTTT
181 SWASIASDCE LFVAFGGVPL KNGQISQGGT GAHVQRGGLL AAHEAGVRFV NISPLRSDIL
241 DRVGADWLAI RPSTDVALML ALAHVLLNEG LHDPDFLDRF TVGFDRFAAY LRGGTDGQAK
301 TPEWAAEICG IPAGTIAKLA RDMAASRTMI STAWALTRQD HGEQPFWAAI ALAAMLGQIG
361 LPGTGIGFGY SAMNNTGLNR RQINYASFPQ GRNPVPDFIP VARVTEMLEN PGGRFEYDGK
421 TYEYPDIRLV WWAGGNPFHH HQDLNRMRRA WARPETIIAN EWCWNALAQH ADIVLPCTTP
481 LERSDIALTP KDPYQVVMDQ AILPVGQARD DHGIFRGVAA EMGVEDMFTE GKSAGEWQRW
541 LWDVSRQQAA EQGVELPGWD RLQRDGWIRV PAPAAPTIML EAFRTDPTAN PLATPSGKIE
601 IYSETIAGFG YDDCPGHPAW MEPAEWLGRA DPGQLHMISN QPRNKLHSQL DHGSVSRADR
661 PKGVEPVMMH PADAAARKLT GGQIVRLHNT RGACLAELRL SDAIRPGVIQ IATGAWLDPQ
721 GDLCRRGNPN MLTLDKGTSK LAQGPIAHSC LVMVEACAEA
SEQDB ID: 3101377DUE
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVTHAAAVH GLDTSPEPVD LARVALKRLG LIGKGTERDR HPTTDELNRL FRCFDDNERL
61 TLPMTRIVKF AVATAMRLDE ICRVEWADLD VDHRTLLIRD RKDPRNKTGN DQRIPLFAAT
121 GFDAWALVTE QAKELGLTNG RIFPYSSKSV GTAFRRACVE VGVKDLHFHD LRHEGTSLLF
181 EWRAPIWWSG LTVSASSASG PLERYFPAQA GGIPVCYAA
SEQDB ID: 3101377DUF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLADQYGRYG YRMVSGLLNN AGWHVIPLPG RRFA
SEQDB ID: 3101377DUG
Reference:
3101377
Name: carbon monoxide dehydrogenase G protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELSDEIIIN APKDQVYAAL NDPEVLKQCI PGCEELIKHS DTELEAKVVL KVGPVKARFG
61 GNVVLDQSGA PDAFSLTGQG NGGAAGHAKG GADVTLTADG DTTILRYKAK AEIGGKLAQL
121 GSRLIQSTAK KLAAKFFKSF ADVVNEDVAA
SEQDB ID: 3101377DUH
Reference:
3101377
Name: carbon monoxide dehydrogenase F protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxF
Sequence:
1 MSPAEILDTD LADAAQELRA QQVPFAFATI VRTAGATAAK PGAKALLSAD GTIVHGWLGG
61 GCTRGAVKRA AVEALQSGVP QLISVAPEDL LAEKGIAPGD TVDGTHFARN GCPSRGTVDI
121 FIEPCLPMPE LVILGASPVA QALNTLAPQF HWAVSAALAS EPVDAQQKFI VIATQGQGDL
181 DALKAALSVD AAYVAFVGSG RKFAALAEKL HGAGIGPEKT NAVNAPAGLD LGAVTPEEIA
241 LSILAQLLRV RRAETVVANG
SEQDB ID: 3101377DUJ
Reference:
3101377
Name: carbon monoxide dehydrogenase E protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxE
Sequence:
1 MTRVTRFAAR DPGPAARVVG FVAHLRDNGL RLGVAEADLS LTALTQVNAA APDECRRVLR
61 AICTGCKEEA ERFDALFDSY WMDAGRVKQR IVPKPQATLN ESVHSSRDGS GEDAGSSGTS
121 TTPDTEDGQA DSDGTGKLIA TEQRNLSRRD LRDLVRPDEI AEAEAIAHRL GAALRDKRSR
181 RRIAARKGDR LHFRKTIRRS LSTGGEPLQL LRKRRPDRAR KIVALCDVSG SMSVYAQVFL
241 AFLAGLMRAD KDADAYLFHT RLVRITEALR DKDTMRAIGR MSLMADGFGG GSKIGPSLQR
301 FADTYAKRFV DGRSVVLILS DGCDTEPPEH LDAALTKLKK RGCKIIWLNP LKGWRDYAPV
361 AGGMAAALPH LDLFKAANTL DDLAALETEL GPL
SEQDB ID: 3101377DUK
Reference:
3101377
Name: carbon monoxide dehydrogenase D protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxD
Sequence:
1 MCAPAPEILM TWQSLQTALA AQSYVASDDL SVALHLALTL ERPLLLEGAA GVGKTEIART
61 LSLTQDTKLI RLQCYEGLDA SQAIYEWNYQ RQLLTIRSAA EGGETGKSVE DRIFSRDFLL
121 ERPLLAAITQ EKPPVLLIDE IDRADEEFEA YLLEVLSDYQ VSVPELGTIT ATCKPIVILT
181 SNGTRDLSDA LRRRCLYTYV EYPDRAAELA ILRARCPQVE GHLANQIIGF VQKLREEELE
241 KTPGVAEMLD FAAALMGLGI ADLTHDPAVL QSTLTTLLKT QSDQAHITSD VAARIAGKAA
SEQDB ID: 3101377DUL
Reference:
3101377
Name: carbon monoxide dehydrogenase, Subunit: large, Class: EC1.2.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxL-2
Sequence:
1 MKDEVTSREE RIENLKGMGC SRKRVEDARF TQGKGNYVDD IKLDGMLFGD FVRSPYAHAK
61 IVNIDTSAAL EVPGVLAVLT AKDLEPLGLH WMPTLAGDKQ MVLADGKVLF QGQEVAFVVA
121 VDRYAAADGI EAVEVEYEEL EVLVDPFKAM QSDVVLRPDT VAEDGSPADG AHGPRKHHNH
181 IFTWEAGDKG PTFETIDNAE VVAEETMYYH RTHPCPLETC GCVASMDKVN GKLTLWGTFQ
241 APHAIRTVVS LISGIEEHNI RVISPDIGGG FGNKVGAYPG YVCSVVASIV TGKPVKWIED
301 RMDNLMTTAF ARDYHMTGRI SATKEGKITG LHCHVTADHG GFDACADPTK FPAGFMNICT
361 GSYDIPTAFL EVDGVYTNKA PGGVSYRCSF RVTEAVYFIE RMIEVLAIEL NMDAAELRRI
421 NFIKKEQFPY KAALGWEYDS GDYHTAWDKA LKAVDYDGLR AEQAQRVEDF KAGKTRSLMG
481 IGLSFFTEIV GAGPVKNCDI LGLGMFDSCE IRIHPTGSAI ARLGTISQGQ GHATTFAQIL
541 ASEIGLPADS ITIEEGDTDT APYGLGTYGS RSTPVAGAAT AMAGRKIRAK AQMIAAYLLE
601 VHDDDVEFDV DRFVVKGAPE KFKTMKEIAF AAYNQAIPGI EPGLEAVSYY DPPNMTYPFG
661 AYVCVMDIDV DTGVPEIRRF YALDDCGTRI NPMIIEGQIH GGLTEALAVA LGQEIAYDDM
721 GNVKTGTLMD FFLPTAWEVP NYETDYTVTP SPHHPIGAKG VGESPHVGGV PCFSNAIQDA
781 FRPFGNRHTN MPHDHWRIWK TANELGLHD
SEQDB ID: 3101377DUM
Reference:
3101377
Name: carbon monoxide dehydrogenase, Subunit: small, Class: EC1.2.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxS-2
Sequence:
1 MGKKQHYKIT VNGKEEEFLA EPRELLIYTL RERLNITGPH IGCDTSHCGA CTVTIDGKSV
61 KSCTMFVAQA DGKDITTIEG IGGPDNLHPL QTAFKEHHGL QCGYCTPGMI TRAKKLLEEN
121 PNPTEEEIRF GMAGNICRCT GYQNIVKSIR AAAAEMNAAK EAAE
SEQDB ID: 3101377DUN
Reference:
3101377
Name: carbon monoxide dehydrogenase, Subunit: medium, Class: EC1.2.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxM
Sequence:
1 MIPAAFEYHR PKDMAGVLSI LQEHGDDARV MAGGHSLIPM MKLRMAEVPH LIDLQDVGGM
61 SDIEIGSDSI RIGAMVTQHD IIDNDALAQA APILREAALQ IADPQVRYMG TVGGNVANGD
121 PGNDMPGLMQ CLNATFTVVG SDGEREIPAR EFYEAAYMTA REDDEVLTAV TIPMPQGGHA
181 YEKQKRKIGD YATAAAAVQI VKDGATCVSA SIAMTNLSDT PVYSEAAGSA LVGTSVDDAA
241 IKAAMAAMLD DIDPTEDNRG PVAFKKHVAG VILRRAIERA WSRT
SEQDB ID: 3101377DUP
Reference:
3101377
Name: carbon monoxide dehydrogenase operon, Subunit: C protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coxC
Sequence:
1 MEFLDVSHNN LLVAMSCLVA LVAGFTGLSL TRDLGAKPDF EKKALIALAA ISLGGGIWAM
61 HFVAMLGLQM PILFYYDAAI TLISALVAIL IVGAALIILH FTVRTRLTVS LAGAIVGVGI
121 LVMHYIGMAG LELCRAVYAP LGVIVSSLVA VLLCILALGI AYGQRTNRNI FLGTLCFAVA
181 VTSVHFLAMA GTKFVAVSDG TEFGPLMSNE TLALGVIFFS FVMFGACLWV GVTYLPRPME
241 NVAPPRKKDV PEAEARLLQV PCERDGGKVF VSAKDVVFVR ADAHYTQVYT HHERLFCVWS
301 VTEATKRLVP LGFLQTHRSY LVNPGHVVRF ERTKDSGKCV FGGSETPPAP VSRSKLKAIQ
361 DALASQVGAI RAT
SEQDB ID: 3101377DUQ
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSGTVNYTY SLAGARFANP VSEEHFGSGF ENRGAQTVDP SDDVAQLVER LDLQYLRFPG
61 GSHMEKFFDL ANPDERRPIA LFGDNAGQPA INDFVSLSEF FAYADANNIS PIVAIPTWRY
121 FDQNTRSIDP AAEAVIKGFI RDVLTGEYGN IDIHAFEIGN EWFDDDFNWT PAEFAHVQKS
181 IAVWVAEVRA DVQPINRPDI YIQSSQLGSQ DSDRNGIKDN VEFLSVFTQA QLAQIDGIVD
241 HFYQPVRSAT IFDFPDSLVA STRIGRLRED GWNVTGTNAL KIVTTEWNVR ADEGKGEITG
301 LERAPMFVRL FSDMISAGVD VASVFTTQAL GDSDGTIAQK DEDTFTPTGL LFRMMKNALV
361 GTELVDADGN GNFTTNDVLF QNTAGHNVGY TFTYTSDDKV VVYFSSGVGS TTTINADFGQ
421 LLNSGYHLHG TVLKVTANGD PLAKDADGML EARTRRDLEG ATVDGLLDFD LGGYETIQLE
481 FTKNGGVSLA GDDQTATSDE IIGTGFNDHL EGFDSNDTLI GDGGNDTLEG GTDDDSITGG
541 AGSDVIFTGG AASNGYGRDT ASGGDGDDQL IGSNGDDWLY GDAGNDTLNG GEDYSTADVD
601 YLYGGDGNDL LISGQGTTRA DHQHRGDQLF GEAGDDTLQG GQADDHLEGG VGDDSITGGA
661 GNDVINTGTI GSQTVGDDTA SGGDGDDEIT GSNASDRLYG DAGNDTLNGG DDWITADVDY
721 LYGGDGNDLL ISGQGTTRAD HQHRGDQLFG EAGDDTLQGG QADDHLEGGV GDDSITGGAG
781 NDVINTGTIG SQTVGDDTAS GGDGDDEITG SNASDRLYGD AGNDTLNGGD DWITADVDYL
841 YGGDGNDLLI SGQGTTRADH QHRGDQLFGE AGDDTLQGGQ ADDHLEGGAG NDSITGGAGN
901 DVINTGTFDS RTAGHDTAAG GDGDDEITGS NASDWLYGDA GNDTLNGGDD WITADVDYLY
961 GGDGNDLLIS GQGETQADHQ HRGDQLFGGA GNDTLTGGKA NDYLEGGTGA DSFVFLSDFG
1021 QDTIADFSTS QSGETIDLSG VSQITSFSDL ATNHLTQSGS DAVINDGAGN TITLTGINMA
1081 DLTADDFLF
SEQDB ID: 3101377DUR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLADQYGRYG YRMVSGLLNN AGWHVIPLPG RRFA
SEQDB ID: 3101377DUT
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVTHAAAVH GLDTSPEPVD LARVALKRLG LIGKGTERDR HPTTDELNRL FRCFDDNERL
61 TLPMTRIVKF AVATAMRLDE ICRVEWADLD VDHRTLLIRD RKDPRNKTGN DQRIPLFAAT
121 GFDAWALVTE QAKELGLTNG RIFPYSSKSV GTAFRRACVE VGVKDLHFHD LRHEGTSLLF
181 EWRAPIWWSG LTVSASSASG PLERYFPAQA GGIPVCYAA
SEQDB ID: 3101377DUU
Reference:
3101377
Name: transposase, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo6
Sequence:
1 MAKSLSLDIR ERVVALVGEG LSCREAARRL RISAASAVRI VQRHKVRGSV APTPRGRPRG
61 GGKLDAVSRF LRREIEARPD MTMPELADRL RDIHDVRADP AELSRYLRHR LGLTYKKIPH
121 RDGKTGQAGA RRAIRLAAQA AAEDAC
SEQDB ID: 3101377DUV
Reference:
3101377
Name: transposase, Isotype: orfB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo6
Sequence:
1 MRAARYDWQH RRLPRMRVEP HRLVFIDETA VTTKMTRLRG RCPRGARLEA DAPFGHWRTQ
61 TFIAGLRVDE LTAPWMLDGP MNRAAFEAYI ETQLAPTLAP GDVVIADNLA AHKSKRVQDL
121 LHDQDNWMLF LPAYSPDLNP IEMAYSKLKA HLRRIAARTF DALTEAVGSI CDLFSWQECE
181 AYFKAAGYVA E
SEQDB ID: 3101377DUW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGGRIIYAL DRGLLRDLKF STYSFENSSQ GKFILNIIFG DSTYYVDSLS ENLKRGQGAK
61 IRNGWMPNRA AIGYRHCRES QRMVPEPKNF NVVRDLFDLL LTGRYSVSEI YRIACEDWGY
121 MARYSHEQLT YGTIAPGVAR RLLDAGRVDE ALGIVIGARA VEDGKSFRML SYSLDEVYQE
181 CLERLGRTDE LKTHVWSTFR ETLSAPVCNS T
SEQDB ID: 3101377DUX
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTARDRKGRS MSKTIIITGA GSGVGRVTAQ AFLEAGWRVG LVGRRAAALE ETAAGHVNAR
61 VMACDVTSEA QVDAAFAAAS AEWGRLDALF NNAGVSLKGA PIDEISVDDW RNLMDINLNG
121 SFICARAAFG LMRRQDPQGG RIINNGSVSA YVPRWGSAAY TASKHAITGL TRTISLDGRP
181 FNIACGQIDI GNALTEMART MTTGMPQADG SIAIEPVMDV SNVARSVVHM AELPSEANVQ
241 FMTVMATNMP FIGRG
SEQDB ID: 3101377DUY
Reference:
3101377
Name: dihydroxy-acid dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTRANKRF RSQEWFDNPN NPGMTALYVE RYQNSQFSRE ELQSERPIIG IAQTGSDIAP
61 CNKIHVFLMD RIKAGIREAG GIPMEFPVHP IQETGKRPTA ALDRNLAYLS LVEVLHGYPL
121 DGVVLTTGCD KTTPAMLMGA ATVDIPAIAL NGGPMLDGWW QGKRAGSGMI VWESRRLLAE
181 GKIDYEEFMA RVCSSAPSLG HCNTMGTAST MNAMAEALGM SLTGNSAIPA PFRERMSMAY
241 ETGKRIVGMV YEDLKPSDIL TREAFENAIV VNAAIGGSTN APPHLQAVAR HIGVELNVKD
301 WETIGFDVPL MVNMQPAGEY LGESFFRAGG VPAVMGELLK AGRIHVQAMT ATGHTMGANL
361 AGIESQDRNV VTSYDAPMRK NAGFKVLSGN LFDSALMKTS VISQDFRERF LSEPGNEGVF
421 EARAVVFEGP EDYHERINDA DLNIDERTIL FIRGVGCVGY PGSAEVVNMQ PPDAVIRQGV
481 NHLPTVGDGR QSGTSESPSI LNASPESVVG GGLAHLRTGD MVRLDLNSSR MDALVPEDEW
541 QARIDAWQPP EIVSQTPWQE IYRRHVGQLA DGGCLELATA YQKVRNALPR DNH
SEQDB ID: 3101377DV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVVISPAKR LDWAERDVAT TEPAFQDDAV RLAKTARNLT LGDLKKLMGL SDDLARLNRD
61 RFREFADAPG ADVTRPAALA FAGDTYQGLE AASLDSEEMD WAQQHLRILS GLYGVLRPLD
121 AIQAYRLEMG SRLKTRRGTS LYDYWGDQLS RTLNAQADEI GTDVLVNCAS QEYFGAVDPK
181 ALKLRVITPV FMEDKGGAPK IVSFFAKKAR GAMARYIVQR RLTDPQALSE FDSGGYQYNA
241 DLSAPDKPVF LRPYQG
SEQDB ID: 3101377DVA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRSAIGLAI EFLFGIPNAR TINGADPIRH LALLFCGSLA FAPPALADVD IQAADACLAA
61 AFDAGGQGGD CVESAHAECS ALPEEAPAVA VLCFTDGQRV WDTATAATMK SLATRLPEDV
121 AAITGIEVKY DILSGLLQCD RLEELAIAVS DLPSGTIARE KARCAATVAG LAYTRLRWRA
181 QGLK
SEQDB ID: 3101377DVB
Reference:
3101377
Name: aldolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEEPPLLTI RRAFPRPTAA QVAAFQDVPT GFVCDALGGQ GAMNTVIRPI GGLEREVHAA
61 GPALVADNGP AEILATVAAV HFAQPGDVIV AATHGGRNVA AAGDNLCAMM RNKGCVAFVT
121 DGELRDYKGL MEVGLPAWCA GLNPNSPFSK GPGRVGFGAT VAGRHVESGD MIVADRDGVV
181 VVPFTRIDAV IARLEQITRL EAEAEEKVRS GYCDFPAIEA MIADGSAIVI D
SEQDB ID: 3101377DVC
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTVDLSGLV AVVTGGAQGI GRAVAERCLA SGARVALWDR DRALAERTAA ALGTAETVRA
61 CGCDITDPAS IAAAMAATEA AFGQVDILVN SAGIAGPNAL VEDYDDDAFA QVIAINLTGT
121 YLVNKAVVAG MKARGFGRIV NIASVAGKEG NPNAAAYSAS KAGVIGFTKS LGKELAGFDI
181 AVNCVTPAAA RTAIFDQLSQ EHIDYMLSKI PRARFVEVGE IAAMIAWLVS RENSFTTAAV
241 FDLSGGRATY
SEQDB ID: 3101377DVD
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRITAIRSHV LQTDMPEELG YSQQYYARRT AHIVEVQTDE GITGWGECFG PGTVALANKT
61 IVEKVIQPMV LGDDPLDRDV IWHKVYNLLR DHGQKGMPIQ ALSGVDIALW DIAGKVTGLP
121 LHKLIGGAHR TRVQAYGYGM MLKRESTAAH LARFADEAAA IRDMGFAATK MKVGLGARED
181 VKLCEAVRRG VGEGFDFMVD ANHCYTTSDA FFVGRALEEL GAYWFEEPVA PEDLDGYRAL
241 RAGLKVNISG GEAEFTRWGW RRLLEAQGLD IAQPEVCALG GITEYLRVLA LCHAHFVPVV
301 NHVWGSAVAV ATNLHLLAAM PPMPGGLFPR EPWLEFDTTL NIFRDSLLTE PLDIQGQVAR
361 NGGWIAVPDG PGLGVEPDRA FLSAYAFAG
SEQDB ID: 3101377DVE
Reference:
3101377
Name: phytanoyl-CoA dioxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSREQKDFY AENGYLLIEN AVTTEQLDRL RAITAGLIDA SRQVSASNDV YDLDSGHGPD
61 SPRLTRIKIP HKQDPYFWEV LRTSAMTEVL TDLLGPDTSI LTSKLNTKAP GGGAAVEWHQ
121 DWAFYPHTND DLLAFGLMLE DVTEDNGPLM VVPGTHRGPV LDHHVGGVFA GAIDPDDPLF
181 DRDRIVTLTG KAGSMTVHHV RLLHGSAPNI SDRPRFILFY ELGRADAWPL LGAASYIHSL
241 GQRRFWDDLV DRVVTGAPCI QPRVAPVPVR MPLPPAPDTS SIFKTQESAG AKSAFATVPR
301 KGQQ
SEQDB ID: 3101377DVF
Reference:
3101377
Name: 3-hydroxyisobutyrate dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRPVIGFIG LGFMGHGMAK NILKGGYPLW VRGNVNRTPI DSLVALGAQE AASPADMAAR
61 CDIIHICLGN SKQVEAVIRG PEGILAAARP GLIVIDTTTA DPVSTLALAA EMAAQGVHMV
121 DAPLGRTPKE AEDGTLDAMV GCDEALMKTI TPVIDCWAGT ITRIGPVGAG HKMKLLMNFL
181 GGAYAALYSE AVVLGARVGI SPHTFREVIG PSRLGSGFFA TFMQYVCERD ENAHKFSIAN
241 LSKDMRYVNA MATEAGVVNI MASAARHYYT HAEAQGAGQD FVPMLSNHVG ALNGLDMDEV
301 TRK
SEQDB ID: 3101377DVG
Reference:
3101377
Name: gluconate 5-dehydrogenase, Class: EC1.1.1.69
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: idnO
Sequence:
1 MDLFDLKGRR ALVTGSSMGI GYALARGLAQ AGASVVLNAR DGARLAGAAE QLRGQGIEVE
61 TLVFDVTDAD AVRKAVDGFE AEIGQIDILV NNAGMQHRTP LEEFPVEAFD RLMRTNVNSA
121 FYVGQAVARH MIGRGAGKIV NIASVQSALA RPGIAPYTAS KGAVSNLTKG MATDWARHGL
181 NCNAIAPGYF DTPLNAALVA DPEFSAWLEK RTPAGRWGEV EELVGACIFL CSDAASFVNG
241 HVLFVDGGIT ASL
SEQDB ID: 3101377DVH
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTFAAAVLF LIITPGPGVM TTAGFGAAYG FRASLSYVVG LFIGTNLVML AVMTGLAAVL
61 LSVPGLRLVL LVLSVGYLLY LAALIALAGA RVAFIEARSA PGVMRGVLLQ AINPKAYAVN
121 TSLITGFNYA PDAFLFEMFT KALILNAIWI PIHLAWLWAG AALHRLNLPH STQRAINILM
181 ALSMLGVVAL ALWSASRVKA
SEQDB ID: 3101377DVJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPHSNPTPE ATLVGRIWRP GIGPCLVRLD GDRVVDITST ALPTLHALLE TPDPLDTARA
61 APGTPVTTLA ELAGSSSPDA GSDALRLLAP PDLQAVKASG VTFAASMVER VIEEQAAGDP
121 DRAAAIRVRV GRVIGDSLSG IVPGSPKAMQ VKAVLQEEGL WSQYLEVGIG PDAEVFTKCQ
181 PMAAVGWGAR VGLHPISSWN NPEPEIVLAI NSRGDILGAT LGNDVNLRDV EGRSALLLGK
241 AKDNNASCAI GPFLRLFDAD FTLDTVRAAE LSMTVKGSDG FILDGRSSMA QISRDPASIV
301 AQTIGRHHQY PDGFFLFLGT MFAPIQDRDA TGQGFTHHQG DVVTISEAAL GSLRNSVFLS
361 TDCPEWKFGT AALMKNLAKR GLL
SEQDB ID: 3101377DVK
Reference:
3101377
Name: 2-dehydro-3-deoxygluconokinase, Class: EC2.7.1.45
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kdgK
Sequence:
1 MTSFLAIGEC MIELHETGDG LYRRGFAGDT FNTAWYAKRL LPASWRVGYA SCIGQDTVSD
61 EMAGFMAQEG IDTCALRRLP DRTVGLYMIS LDNGERSFSY WRGQSAARQL ASDPDWLDSV
121 LSGADILYFS GITLAILCPD HRRALCDALA RARSRGATVA FDTNLRPSLW EDTATMRAGL
181 SLGASVADVV LPSFDEENGL FGDAEPQATI ARYHAAGAGI VAVKNGGGDL TLWDGKRLHN
241 LPATPVARVV DSTAAGDSFG AAFMAGLATG ASATDAAARA MSLAAQVVQS RGALVPGIFE
301 REPK
SEQDB ID: 3101377DVL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNILIIGGGG VVGQKLGRLL ATRGHLRGRE ITRLTLVDIV DPAPIPDAAV PVETATCNIA
61 DPASVAGCIG ADVDVIYLLA AIVSAQAEED FDQGYAINLM GTLNVLERAR ALKTSPVVVF
121 TSSIAVYGGE VPDPILDHSF LNPQTSYGTQ KAIGEMLLTD YSRKGYVDGR GFRLPTISVR
181 PGKANRAASS FMSSILREPL NGQEAVCPVD EDFLHYYLSP RKCVENLVKG AELDAEALGQ
241 NRCMMMPGRI WSIRQLIDAM TAVAGPQPAG LIRWDSQPEI KRIVSGWRYD LRPEKSLKLG
301 LSADDSFEDN VRYYLEDDRP AG
SEQDB ID: 3101377DVM
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTLAIGPY NDNDRQALQQ EFGALMLGGI AEVAGLEPAM RAGISAVAYM GHTAFGGAEM
61 DLLPGLGVIA NFGVGYDAID VAAATARGIT VTNTPGVLND DVADLAVTML LMQCRRMEQG
121 GAWVREGHWE TANFPLNRKA SGGVAGVVGL GRIGREIADR LAAFKMDIHY FARSEKDTPG
181 WTYHADPVSL AKAVDFLVVA LVGGPETEKF ISREVIEALG PRGVVVNISR GSTIDETALL
241 DALERGRIAG AALDVFLNEP TIDPRFLALS NVVLQPHQGS GTVETRAAMG ALQRGNIAAH
301 LAGKPVLTPV NKP
SEQDB ID: 3101377DVN
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEKTTVLQGF RSMTSMIFAD SQPPLRAEPA FGILAGAQAL NRFPDQARVA SLTGTSVGFR
61 GEGHVRFSHA TSTENSVDPI QRIRTIL
SEQDB ID: 3101377DVP
Reference:
3101377
Name: L-idonate 5-dehydrogenase, Class: EC1.1.1.264
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: idnD
Sequence:
1 MHTRVCRIHA ARDIRVETDP LPEPGPAQVI VAMAAAGICG SDLHYYHDGG FGPIRVREPM
61 ILGHEGAGVV AALGPGVTGL AVGDRVAVNP SRPCGTCSYC VEGLTTHCLN MRFYGSAMRF
121 PHEQGLFRDK LLTDAAQCHK LSDHVTISEG ACAEPLAVCL HARHMAGEVR GKRVLVTGSG
181 PIGVLCAAVA AEAGAAEIVV TDLQDAPLEV ARRMGATRTV NIAREVEAMA AYAVDKGHFD
241 LVFECSAAAP AIHSAIAALR PQGTYVQVGV TGDVPLPVNL IVGKELCLQG TQRFRAEEFA
301 EAVRLISSRR IDLRAMISGS FPLEQAEEAF RMAADRSRAV KVHLTFADS
SEQDB ID: 3101377DVQ
Reference:
3101377
Name: shikimate 5-dehydrogenase/quinate 5-dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRAELRLGL IGTGIALSRT PAMHMAEGRA QGIATRYDLI DPDRMETPPP LTSLLDRAET
61 EGYAGLNITY PYKQEVLSHL HHLSPAAAAI GAANTVVFRD GQRFGHNSDA WGFAEAMRKT
121 MPDIRLDRVL LIGAGGAGSA VAHALTSLGV GQLLITDRDM PRALALAAAT GAGALAGSEI
181 TPNMADGVVN ATPVGMAKLP GMPMDPALLA PAQWVVDIIY FPLETAFLRA ARARGCRVTN
241 GRAMAVYQAV RAFELFTGQV AQAGRMQAVF DAFDR
SEQDB ID: 3101377DVR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEPREDRVA AGVVLMSLAA VLFTCIDTSA KWLAGAGVPV LQIVFARYLG HFLYGLAYYL
61 PTEGTATFRS QAPGRQILRS FFLLGSTVLN FQALKYLPIT VTATIAFAGP IVITLLAIPI
121 LGERVGIRRI VAVCTGFLGV LIVVQPWSAA FHPAMFYSLG GLGMASMYFV MTRLLTGIES
181 TATQQIWASG LATLVLAPFA LRVAIWPEAG LDWLVLCTIG AFGLCGHVAA TTAHRWADAS
241 ILAPLIYSQI FWAALAGVIV FNTWPTVWTL GGGAIIIASG LYIWHRESAG GRHRT
SEQDB ID: 3101377DVT
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTGKTAFV TAAGQGIGRA SAQALVREGA RVIATDRNGD LLDGLDVSRA FALDALDKAA
61 LQQAVTEAAP DILVNCTGVV HSGSPLEATD DDFDAAMNLN VRAHFHAIQA ALPAMLDRRR
121 GAIVGIASVA SHLRGLPNRF IYGTSKAALV GLTKAVAAEY VAQGIRCNCI APGTVDSPSL
181 HDRLHATGNY EQAMTQFVAR QPMGRLGEAD EIAALVVYLA SDESAYMTGQ CLAIDGGMTV
SEQDB ID: 3101377DVU
Reference:
3101377
Name: 6-phosphogluconate dehydrogenase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKENNMDKAH IGFIGLGLMG AAMVECLQKA GHAVTVLGNR DRTGVEAALA RGATEAAHAR
61 AVAEASDIVM LCMGTSAQVE SRIYGDDGVL AGTREGQVVI DFGTSLPAST RRIGGDLAGK
121 GATYLDAPLG RTPAHARDGL LNIMCSGDKA TFDRVKPVLH TLGENVFHLG ALGNGHTIKL
181 INNCYSMTTA CAMAEAFAIA DATGIERQAL YNVMAAGPNH SGMMDFINAY ANGGRIDLAF
241 TVANAAKDVG YYRQMATEMG LFSRMSIAAD ATLREARDGG DGGLMVPQMI DWMVRHLGEE
301 KK
SEQDB ID: 3101377DVV
Reference:
3101377
Name: oxidoreductase, Isotype: gfo/idh/MocA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAPLPLCVI GAGCVGMRHV EVARRSPQIR LTAVVEPVET RRRALAESGL VAVATLEEVP
61 RETRAAIVAT PTPDHLATGL AALSRGWAVL VEKPTAGTMD DARVLLGAAD RAGLPLYVGH
121 HRRCHPFSRA AREALGGIGD LVGLQGLWSL RKHDSYYAED WRRQAGAGPL MTNLSHEIDL
181 LRFLVGDMVE VSALTSSARR GLVVPDTAAL AFRFADGALG SFLISDAGAS PWSFEAACAE
241 NPAIAVSGQD YIRITGTAGA LEFPSLTRWG RSAPGEIEWS KPLARAAGAG FARVDPLLEQ
301 INRFAAVLEG AQDDVLCTGT DGNAALEMTL AAALSGKLGR PVRAHEVPGD YSGI
SEQDB ID: 3101377DVW
Reference:
3101377
Name: hydrolase, Isotype: UxaA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTVRLSDAD NVVTAIAQLA PGEDGAAELI PRGHKMAARA IARGEAVLKY AQVIGYAAGD
61 IGPGAHVHTH NLEFRNVEAE YEFSTNLRPV APVATLDSFM GYVRPSGRVG TRNYIAVLTS
121 VNCSATAARM IAGHFTPDRL AAYPNVDGVV AFVHGTGCGM AGQGSEGFEA LQRVMWGYAR
181 NPNIGGVLMA GLGCEMMQID WLIEAYGLSP GPLFQAMNIQ DMGGLRKTVD KGIEKIETML
241 PLVNQARRTP CPASELMVAL QCGGSDAWSG VTANPAVGHA CDLLVAQGGT GVLAETPEIY
301 GAEHLLTARA ADRATGDKLV DLIRWWEDYT ARNKGSMDNN PSPGNKKGGL TTILEKSLGA
361 VAKGGTTPLN GVYRYAEPVT ARGFTFMDSP GYDPASVTGQ IASGCTLVVF TTGRGSAFGS
421 KPSPTIKVAT NSEMYTRMSG DMDVDAGRIL SGGATVEQVG REIYEMWLRV ASGEQSKSEA
481 QGLGDFEFVP WQIGAVM
SEQDB ID: 3101377DVX
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEFLELFAWM KVGDVATISI ILLIGMFILL AIGMPLGFAS AFLAVAVIVM KFGPEASFGR
61 FGSGPLSVLA QAVYRQMTNY VLISVPLFIF MAALLERSGI ARDMYSSLNI WLSRTRGGIA
121 IVTSIMAVIM AAMSGIIGGE VVLLGLIALP QMLRLGYNQN LAIGTICASG SLGTMIPPSI
181 VLIFYGLVTE TSIKALFTAS FLPGFMLASF FIIYIIVRTN LNPSLAPLPE PDPDDPPGRV
241 KALLFLAFLA KFATYGALFF VGLLLLISAF SGGTMSDDGV TTMWEVLRVR IAKLLVVAAI
301 GFVVSRLLGK ERTSLGWDMG KGLVAPIVVV GVVLGSIYGG ITGITEAAAM GTIAVFVIGL
361 IRREMTVDVV WDSLMRTLKS TGTIIWVTIG AASLAAAYTL AGGPTFVANL IVTSELPTMG
421 VILVMMVIFL IMGMFMDWVG IVLLIMPVFL PIVLKLPVAE IGFLGELEPR HVAIWFGVVF
481 CMNMQVSFLS PPFGPAAFYL KSVAPPHISL TAIFRGFLPF IMLQLCALAV LLIWPNIVTL
541 FL
SEQDB ID: 3101377DVY
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVFCASLYL SDIRGAIEEE ANGFFDILSL VTSRAAMIMI AFVVLVMFYE VVSRYVFSRP
61 TLWANELSLW IASFVFLFAG QYAMQQRSHI RIYVIYDIMP RWAQKTSDVV SVLLIVVFTF
121 ALVWGNYADA ERRFLRMETF GTAWDPPIPG IVKPAVLIII VLVALQAISN LIADWHKAPE
181 HHSPLDDIDE TEIEHIRKTL EK
SEQDB ID: 3101377DW
Reference:
3101377
Name: ATP-dependent DNA helicase, Isotype: RecQ, Class: EC3.6.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recQ
Sequence:
1 MFDAAPLLRD VFGFDAFRPG QEEIAQAVAE GENVLAIMPT GGGKSLCFQL PALMREGVTV
61 VISPLIALMR DQVRSLQEAG VEAGALTSGN TPEETEAVWQ ALEAGRLKLL YMAPERLASG
121 AAMGMLRRIG VSLIAVDEAH CVSQWGHDFR PDYLRIGELR RALGVPLAAF TATADAETQA
181 EIVAKLFDGE EPRSFLRGFD RPNIHLAFAA KDSPRRQILD FAGARRGQSG IVYCGTRAKT
241 ETLAQALRED GHSACHYHGG MEAEDRRIVE TRFAREDGLI VVATVAFGMG IDKPDIRWVA
301 HADLPKSIEA YYQEIGRAGR DGGPAETLTL FGPDDIRLRR SQIDEGLAPP ERRAADHARL
361 NALLGLAEAM TCRRQTLLGY FGETEITCGK CDLCDSPAER FDGTTAVRMA LSAMLRTEEW
421 FGATHLIDIL LGNQTDKIRD RRHDQLPTYG VGTEWNRAQW QAIFRQMMGR DLVRPDPERH
481 GALRMTEAAL PILRGEAGIE LRKDTVSKAA RRPAVKAMVN DEDAPLLSAL KAKRRALAEA
541 ARVPAYVIFP DRTLIEMAEK RPASLDQMAR IGGIGAKKLE RYGAMFLEVV SGAAEMLHPA
601 RRKLAGRQTG NIYDRLLAVQ ADLARGPDGI DKPLSCSASQ LAKVAQMRPD DRSGLEALLG
661 DRRWERFGEA FLDVLGQTT
SEQDB ID: 3101377DWA
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWVFQIWYT KKKLIVETLL ASVLADGIPS LSARLAREPE TAAIERRQGR RITMSLKFIY
61 VAAGAAALAA TTALADPVTL RVQTHYATEH PTGKQLAIWA DDVQTMSGGD ITIEMFYSSS
121 VVATTETFDA AINGILDCDA TGGAYQTGKN PAFQFVGDIM GGYDTPWQQY SWLYFGDGYA
181 AAQELYNAQN MQLIGWAIYG QESLSSSKPI RGFEDLKGWK FRSPPGMETE IFEKLGASPI
241 VMDFTEIFTA LETGIIDGAD ASGLYNNVGL GLYDIVKHAT YPGFHSMPSD HLACNLDVWN
301 GLTDQQRRIV DTAWQKLGFQ IALSNELNNN AAAAKLRAEG VTLHNWSAED RAEFRKAAQA
361 AWDDWGTRSP EAGALLASHK SYLTQLGLLN
SEQDB ID: 3101377DWB
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGKSVREVP MTEEILAESI ALRLRRDILR GKLVPGTSIK ERDNAAEMGV SRTPMREAIR
61 ILANEGLVQL RPSRSPIVTQ LSLNEVVSFI EVLSALEMLA VTLACERATK IDIAHVRGAE
121 RKLATQYDRI DQVERFELDM DFHIALTRAS HNQALSDTHM SYLRRLWYAR FQSARNRHTK
181 DRVLQQHAAL VDAIERRDPT MAQTELSSHL ENLRINVHAY FERAEREQLQ LKNSA
SEQDB ID: 3101377DWC
Reference:
3101377
Name: fumarylacetoacetate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLLRFGPAG AEKTGMLDAD GNVRDLSAHV PDLSGAAVSI EALDALRAID PATLPLVADP
61 GRIGACLSSV PNFFCIGLNY AKHAAETGAT PPSEPILFSK TTSCLSGPND PVIIPRNSVK
121 TDWEVELGVI IGRSALYVDE ADALDYVAGY CTINDVSERA FQAEMGGQWI KGKSAPSFGP
181 IGPWLVTADE VPDPQALDLR LSLNGKVVQD SNTDDMIFSV AQIVSYMSRF MQLQPGDIIA
241 TGTPSGVGLG MKPPLFLKPG DTMELSVQGL GSQRQVAVAA D
SEQDB ID: 3101377DWD
Reference:
3101377
Name: FAD-dependent oxidoreductase/aminomethyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTASLPDKAR VVIIGGGIMG CSVAYHLAKS GWSDVVLLER KTLTSGTTWH AAGLVGQLQG
61 SHATTAFASY GVELLQEIER ETGQNPGFRQ SGSISIAVNE ERLAELKRKA DFARLFGVEA
121 HYMQTAEIAE RWPLMNAEGV LGGIHMPSDG SANPVDLTQA LARGARKYGA TIRENVKVEK
181 VLTANGRVTG VRSDHGTIMA DFVVNCGGMW ARDLGRQNGV GVPLHACEHY YLVTEPILDL
241 PADLPVLRSY CDGTYWKEDA GKLLFGFAHF HAKAWATGGI PDSFEFDSLP FVEDDVIEVL
301 DLAMNRVPIL QETGIRTFFN GPESYSHDGR FTLGEAPDLK GYFVLAGVNS TGIQSGSGAG
361 RAVADWIMTG HPPMDLSEMD PARIEEWQAR DPYLRDRCPE TLVLTYAMHW PGRQRQSARG
421 LRRTPFYHVM KAHGAAYGEV QGWERPGWFA PGGETPVYDH SFYRPGWFDH AQAEQRAVRG
481 AAGLIDYSML GKLMVEGRDA EAFLQRACTN DMALPVGRVA YTLMLNDHGG IESDVTVARH
541 GPDSFMVMSA ISHTRRDRDH LRNLIRPDED VRLRDATSAY AVLSLCGPKS RQILADVADI
601 DLSDAAFPFN SLARFHIGHA PVFAQRLSYT GDLGWEIFVT PDFAEHVFDV LMASGAPQGL
661 RLVGGEALNA LRIEAGFAHW GHDMAYTEAP HQVGLGFVCK PDKAVPFIGR DACLARKAAG
721 KGPFLCSIRL TEGTPLLHHN EPVLQGGAVV GFVTSGAFSA AAGSAIGLCM VSPPEGGGRR
781 DLETGAYSVL VEGREVPARL SLRALWPLAE DG
SEQDB ID: 3101377DWE
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQNAASSPPS VIETLAFETD AGLGQRARIG LIVLQTDQTI EHEFAHLFGG EGVALYHARI
61 PNAMEVSPET LRQMQVDLPR TAALLPASFD FDAIGYACTS GATMIGEARV DEMIRAEHPG
121 ARTSNPITAC KAALSALGLR RIALLTPYPP EVTLEMQANL RAAGFQTAAV ASFNQSDDFT
181 VARISAQSIL DAAVTIGARD EVEGVFVSCT SLRALDVIAE AEARLGKPVI ASNQVLAWHL
241 MRLAGLDGAP EGAGRLFAAG
SEQDB ID: 3101377DWF
Reference:
3101377
Name: phytanoyl-CoA dioxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLLSQEQKD AFWRDGVLVV EDAVSPGELA ALRAEFAGWV EESRARTEDY GETLDGRARF
61 DLQPGHCADK PALRRVQSPE EVSEVFADTM RKARTVDYCA ELIGPGVRFH HGKVNSKLPG
121 SATQVKWHQD FPFEPMTNDD MITCLLFIDD VTLENGPLEV IPGSHKGPIH SHWHNGVFTG
181 AVDDEIVEAQ RDRIVKCTGK AGSVCLMHAS LLHGSAPNLS DQPRTLYITT YYAEDAIELS
241 PNHLPSRFTH ELVRGEASGR VRCTAYQMEL PAVPKGTSFF AQQEGSDGAG AGAMM
SEQDB ID: 3101377DWG
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNDATPDQLR TGPSRETPRF QQIVQDIKRR IADGSLSEHA ALPSERRIAE ETGISRMTAR
61 RALDALEAEG LVYSADRRGR FVSPKRVSYD VSNLVSFVAD AESRGTALGI EVIRAQEGKA
121 DPALAARLEL EPGAAIHEYT RLFRQDGHAI FVETEYVDAR RCPDFLSHDL HQSTTRLLES
181 QYDLVARTGD IVIRMRGAHP EETHLLGLAQ SQSGIELTQV IRDASGRPFC FGRQFWRGEM
241 AEFSARAIVG GSIHG
SEQDB ID: 3101377DWH
Reference:
3101377
Name: metallopeptidase, Isotype: family M24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRGFTPAEFQ ARTTRAQERM AAQGLDGLLL MSEPDLRYFS GFHTLFWQSP TRPWFLFVPA
61 SGKPIAVIPE IGAELMRRGW LDDVRTWPAP RPEDDGISLL TELLSPLAAR GARLGVMKGH
121 ETLLRMPLGD WERLLAALPG LEIADATGLV QGLRMVKTPA EIEKLAHICA IGSATFEAVP
181 QFVSEGMPLD AVFREFRRTA IGLGADDAPY VVGAADQGGY ADVISPPTQQ PLRAGDVLML
241 DTGCTWDGYF CDFDRNWAIG QADDAARRAY DVLWRATQAG IDAARPGATC RDLFQAMSAV
301 IAELDDSGGD IGRLGHGLGM QLTEQPSHAA FDTTVLQENM VLTIEPSLSY GDGLMMVHEE
361 NIVVTDGTAR LLSTRAATEL AILR
SEQDB ID: 3101377DWJ
Reference:
3101377
Name: Gly betaine/Pro ABC transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNNPMNLARS VIAVAAMTSA SAAWAECGEV SLTEMNWPSS QIITHTAKFL MEQGYGCTVE
61 LVPSATVTSV ASLAENGEPD IVTELWLNSA GEAYLKLEAE GKVERLAEVF NPGGLEGWWI
121 PTYLAEANPE LTTVAGILAN PDLVGGRFNN CPVGWGCRIV NDNLITALGM RDKMEIFDHG
181 SGETLATSIA AAYEDKTPWF GYYWAPTAVL GKYPMTQISI GDIDMDVHLA NQSAENANPG
241 VSDFPPAPVL TVATSALTER APDVADLMRN VSFDIEVMNA VLAWKDDNGA SAEEAAVYFL
301 SNNSDVWAGW VNDAAREKLA ALIK
SEQDB ID: 3101377DWK
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATYDFLFNS LGLRDWCDAG KTGEATLSMA DLLAKAGGKT ETSLFNLPFP SLDELNRACA
61 AFAKSRDVTK GVEEGFLAAK GVLRFVLDPL TQPLSWMLEF ALATFEATPW WIMMPLLALV
121 VFFASRSMRL VGFVMACLMF LAFVDHYDHA MQTLAIIFVC AFLCVLFGVP IGIAMSRNDR
181 LQRMTIPILD MLQTLPSFVY LIPLIFLFSV TEPKLYGIAI ILYAIVPVIR LTDLGIRLVD
241 RDVIEAADSF GMTDRQKLFG VQIPLALPNI MAGVNQTIMM SLAMVVIASL VSAPGLGVLV
301 LRGIRNLELG VGLVSGLGIV LLAVILDRVT KAALNRVNAA QQH
SEQDB ID: 3101377DWL
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDNIKVSIR NLYKIFGADP KAALKHVLEG MSKADLLKQH RHVLGLRDIN VDMREGEITV
61 IMGLSGSGKS TLIRHLNRLI EPTSGEVRVD DKDVLAYDEE QLRNLRREVM SMVFQKFALL
121 PHKTVAENAG TTLKVRGVAK RDYLVEADKW LDRVGLHGYG NHYPHQLSGG MQQRVGIARA
181 LTSNSPIMLM DEAFSALDPL IRTDMQDLLL ELQTELHKTI VFITHDLDEA LKLADHLVIL
241 KDGYVVQQGE PQHILLNPND PYIEDFVSDI NRARVLRVRS IMTPLDGQPV PPDAHGEVDY
301 DDTLESMIAR SGGDTSHRYV VIRDSAPVGT LDMTHLVKAL VPRVATEASA RKA
SEQDB ID: 3101377DWM
Reference:
3101377
Name: nucleoside diphosphate kinase, Class: EC2.7.4.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ndk
Sequence:
1 MALERTFSII KPDATRRNLT GKINAKFEEA GLRIVAQKRI HMTKEQAGVF YGVHAERPFY
61 DELCEFMSSA PVVVQVLEGE NAIAKNREVM GATNPADAAP GTIRAEFAES VGENSVHGSD
121 APETAAVEIA YFFSGIELVG
SEQDB ID: 3101377DWN
Reference:
3101377
Name: drug resistance transporter, Isotype: bcr/CflA-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGWSGARDRD SADLPSKPPD PLMRHASNPP HLITLVLLTA LSVLTLNMFL PSLAHMGQDF
61 EVDYGLINLA IAGYLGVSAI LQLIIGPLSD RFGRRPVLLI AMAIFLVASI GCVLAGSIWV
121 FLGFRLLQAA VVAGPISSSA SIRDQYPPNE AASKLGYVAM AMALAPMLGP MLGGALDMLF
181 GWRAGFVLYS ILGAVMLALL WVDFGETNTE RSVTFKAQWQ QYPHLFRSRR FWGYALCASF
241 SIGGFYAFIT GAPLVAAAWF DLSPALLGLG IGIITGGFMV GNFVTGRIAA RTRLTTMILL
301 GRIIASTGPA IGLILFLTGA GSVWVFFGSA VLVGFGNGLT NANAVAGLMS VRPRLAASAA
361 GLSGALTVAL GAVLTTVTGI VVSAENAPFA VLGLMSGSSF LGLLAVLYVR WVDLREPLPD
421 T
SEQDB ID: 3101377DWP
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRIENITYA VEGRPLFDGA SAVIPDGHKV GLVGRNGTGK TTLFRLIRGE LALETGTIAL
61 PRRARIGGVA QEAPASDVSL IDTVLAADTE RAALMAEAET ATDPIRIAEV QTRLADIDAW
121 SAPARAASIL KGLGFDDDEQ LKPCSDFSGG WRMRVALAAV LFSQPDLLLL DEPTNYLDLE
181 GALWLESYLA KYPHTVIIIS HDRGLLNRAV GAILHLEDRK LTLYQGPYEQ FARQRAENLA
241 QAQAMAKKQE ARRAHLQSYV DRFRYKADKA KQAQSRLKAL ARMQPISSPQ EAALRAFTFP
301 KPEEMSPPII HLEGGVTGYG QTEVLKRLNL RIDQDDRIAL LGKNGQGKST LSKLLSDRLP
361 LMAGRMTRSP KLRIGYFAQH QVDELYVDET PLDHLRRLRP GETPAKWRAR LAGFGLGAEQ
421 AETAVGRLSG GQKARLSLLI ATLDAPHMLI LDEPTNHLDI ESREALVEAL TDYTGAVILV
481 SHDMHLLTLV ADRLWLVSDG SVKPFEGDLE AYRDFLLARD KPESPKPAEA KPKRASRDTV
541 LALRAELRKC EERVEKLSEM HDKLAAKLAD PALYADDKVS DLEVWNRKYA ELKDAMERAE
601 TLWMEAQEKL DAVQAT
SEQDB ID: 3101377DWQ
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGGAGEARR GAGDMIVRQA GPADAAAMSA VLHPILTGWN SARSGDAETV LTRYIDDPDR
61 LSCAVACEGE RILGFQSLKL ARAGNVYDLP AGWGIIGTYV AGDAGRRGIG RALFTETLAA
121 ARRAGLAHID ATIGADNAQG LPYYSALGFQ TWRELDGAVG KRFDLSATEQ TEGT
SEQDB ID: 3101377DWR
Reference:
3101377
Name: membrane protein, Isotype: MarC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDTAFLITA FTTLFVVIDP PGQTPIFMAL TQGMDSRTKR AIALRACLTA AGILAMFAAF
61 GEAVLGFVGI SMPAFRVAGG VLLFLTALDM LFERRTKRRE DRAEAEEHAD PSVFPLGIPL
121 IAGPGSIATM ILLAGQHPGA EGLATVIAVM LAVLAVVLFL YLISGLLGRL LGKTGLNVVT
181 RLLGMLLAAL AVQFILDGLR AFGFAS
SEQDB ID: 3101377DWT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDADNTAHLI YLSLLGAALV FWFISHNRAS LGKTLQMALA WVFIFVGVIA VVGLWGDIRS
61 TVAGTPRISV SENRVEIPRS PDGHYYATLI IEDKPLRFLV DTGASQVVLS HADAERLGID
121 TSALNYFGRA YTANGEVRTA PVKLGRVQLG GFTDQGVTAW VNEGEMSESL LGMDYLQRFR
181 SIEIAGGTLV LAR
SEQDB ID: 3101377DWU
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHFPYDLTA PIGCAATLGL IVLQADETVE QDFQRLFAAP DQALYVTRIP SGADVTPETL
61 RQMERDLPHS ASLLPPSVAF STVGYACTSG ATMIGPDRVA ELIRGACDTQ ASTDPLTAAR
121 AALRALGITR LGIVSPYVAS VAEPVRQALG AAGVETPETL SFGEASEARV ARIDPASIRA
181 AALELGRRGG LDGLFLSCTN LRTLDVIDEI ETELGLPVVS SNLALAWHMA SQAGLTLPDA
241 PGRLMRQLAG
SEQDB ID: 3101377DWV
Reference:
3101377
Name: acyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTPVSRDA ATASAPVRLI KLVVLILLGP LYFLVIAFVP LLCARRRGFR GWYWRLVKRA
61 CSRLLWLLGI RVEITEAERA ALAQDRDSII VINHRSHLDG FALMDAVPDA KWFTFAAKKE
121 LCRHPLLRTG FTGAGLVEID RKNGSLAMET LSAAVREMPA RRSVVLFPEG TRTGGETLGP
181 FKAGAVLAAR ASGRTIRPIV IHDSDRLLPR GRVLPQGGAI RVEVLAPFVC DPAAPVDADV
241 ARLRAAMLAA FDRD
SEQDB ID: 3101377DWW
Reference:
3101377
Name: DNA polymerase III, Subunit: chi
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAAYFYHLT RNPLEATLPV LLTKALGAGW RVAVRGSDPG RLVWLDEKLW LGPDDGFLPH
61 GLAGGAHDAD QPVLLTTGAD APNGARCVMS VDGAAVTPEE VAALERVCIL FDGTDPAAVE
121 AARGQWRALT AAGCAAQYWS EESGRWEKKA EAGG
SEQDB ID: 3101377DWX
Reference:
3101377
Name: cytosol aminopeptidase, Class: EC3.4.11.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pepA
Sequence:
1 MTSPTPIRFE MPDLDAMAAA TGRVAVIVPP EGKLDPGARR ANRLTRGALA RLVESDRFAK
61 LKPGQVVSLA WPAGMAAEAL DVLVLPRRAD ALTARKGGAA LAKLAGGKPL LLMAGGQVRA
121 EQLALGIALR AYDFTAHKSK PEEEAAEATD ASVTIAHNKA EEIAAAYAPL AALAEGVHMT
181 RDLVNEPANV LTTTEFANRL KEMEALGLEV EVLEEDKLEE LGMRTLLCVG QGSDSPSKVV
241 VMHWKGGDKD AAPLALVGKG VVFDTGGISL KPAAGMEDMT MDMGGAGVVA GTMRALALRK
301 AKANVVGLVG LVENMPSGRA TRPGDVVKSM KGDTVEIINT DAEGRLVLCD VMWYAQERFK
361 PTGMIDLATL TGAIIIGLGH ENAGVFSNDD TLCNAFLKSA GDEGEGAWRM PLGKAYDDML
421 KSRIADMKNV GGRPAGSITA AQFLARFVQE GTPWIHLDIA GVASVTAETD MAPKGATGWG
481 VLALNRLVDR LAE
SEQDB ID: 3101377DWY
Reference:
3101377
Name: permease, Isotype: YjgP/YjgQ-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILDRYFARR FIQSFLVIGL VFLGLVLLID LIEQLRRFEG FEVSMGQLVG LTLLNAPAAI
61 SEILPLLMIL STIVLFVGLA RSSELVVTRA IGRSGIRALV GPVLVALVIG LLAVTTLNPI
121 VAATAVRYQT LADTYRNGGP SVLSLSDEGL WLRQGDAGGQ SVIHATGFGG DGVTLFDVTI
181 LSYAPDGSAQ RRTIAESAQL QDGKWLLQKA KVWPLKVGQN PEANAVYHDR IEMPTSLTQE
241 RIRDSLGRRE TVSIYDLPQT IEQLQQAGFS TKRHKVWLQV ELARPLFLVS MVLVGAAFTM
301 RHTRFGGTGL AVLSAVLLGF TLYFTRNFAQ ILGENGQIPV ALAAWAPPVA AIMLTFGLLL
361 HAEDG
SEQDB ID: 3101377DX
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQISKRPRWR WQRCGATRPC RRHLDNIVIE RLWRSLKQEA IYLEEITDSF QVRRISKGWM
61 AFYNTRPHSA LDRQTPDDAY RPGLNERNAA
SEQDB ID: 3101377DXA
Reference:
3101377
Name: organic solvent tolerance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRALLSTLLS GVACLHLAGA AAAQTLPATP AEQTEAQPAV LVADSVFITP ERQLIAEGNV
61 EAFQGDIRLR ARKITFDRQS GQLNIEGPIR IDQGGQITVL ADAAELDKNL QNGLLTGARM
121 VFDQQLQLAA LQMTRVGGRY TQLYKTSVTS CHVCENGKPP LWQIRAQKVI HDQLEQQLYF
181 EGAQFRVLDV PVFYFPAMRL PDPNLKRATG FLIPSIRTTS QLGTGVKVPY FFRLGDHRDL
241 TLTPYVSSKT KTLNLRYRQA FARGRIEIEG AYTRDDLIRG EDRGYVFATG QFDLRDDYKL
301 KLGVQTVSDN GYLADYGLPE YDRLRSEVSI ERFRRDSAFR IGLIHYETLR DSEIEAEIPT
361 EIFDINAEKR YFPTGLGGEV RLAFDGHAHQ RQSSANVVGR DIARATLDAE WLRSWTFASG
421 LRADWRMGVA VDDYRVWDDT NYASGTLRSA PRAALTLRYP MVYRGATGTH YLEPIAQLGW
481 SDVSGAPLPN GESNFVEFDQ GNLLALSRFP ANDQREEGKR AVFGLNWARF STSGWQAFAT
541 IGQVFRSTSD PRFSKSSGLG GTASDLLLAG QITLPQGLGL TARGLLDGSL NFSKVEVRGS
601 WTDDRTSVSG SYLWLGRDLA ENRALAVSEF WFDGSYKVNP YWTASANIRY DIEDSRATRA
661 GIGFAYQNEC VTVNISVNRR YTSSTSVEPS TDFGFTIALS GFAVESANKE YRRSCSKT
SEQDB ID: 3101377DXB
Reference:
3101377
Name: PPIC-type PPIASE domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQQNLTTLSR CLARMMGAAA LTLTLAGGPV AAQSLFSPAI RVNQGVITHF ELEQRIRLME
61 VLRIPGDPQK DARRSLIEEA LKMQAVEEAG IEVAPEDVQL GIDDFAARAR LSTDEFLAAL
121 ANEGVSAETV RDFVSKQMAW RDYVSARFLA RARPTPDEID RALGLGGGGG LQVLLSEIII
181 PITPQTVDQV DEVAQQIAAL TSYEAFSSAA IQVSAAETRE NGGRMPWIPL AQLPPALQPV
241 ILELEPGEIS DPITLPNAVA LFQMRGLREA AVGTPRYAAI DYAAYRMAGG RSPETLKAAT
301 ELRQRVDTCD DLYGVAKGQP AEVLERISAK PAEIPQDIAL ELAKLDPGET SLALTRNNGQ
361 TLLFLMMCTR TRDLGGDASR EDVANALTQQ RLQTLAESLV EQLRADAIIT EE
SEQDB ID: 3101377DXC
Reference:
3101377
Name: Thr(4-OH) 4-phosphate dehydrogenase, Class: EC1.1.1.262
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdxA-1
Sequence:
1 MRPIALSCGE PAGIGPELAA AAWSALRADC PFVWIGDPAH LPSGTPVTLL DDPARAVAAS
61 DSALPVLALP FAAPTQPGRP DPRNAAGVIA AIERGVALVQ SGACSALCTA PIHKKALIDG
121 AGFAYPGHTE FLAALAGCDR VVMMLASDQL RVVPATIHIA LSEVPRALTP ALLRETIEIT
181 AAGLRDRFAI AHPRIAVAGL NPHAGEGGAM GHEEIDWIAR LLQEITGDFT LTGPHPADTM
241 FHAAARARYD AAVCMYHDQA LIPIKTLDFD RGVNVTLGLP FVRTSPDHGT AFDIAGQGIA
301 NPSSLIEALK LAQRMAASG
SEQDB ID: 3101377DXD
Reference:
3101377
Name: dimethyladenosine transferase, Class: EC2.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ksgA
Sequence:
1 MSAIDTLPPL REVIASHQLS ARKSLGQNFL LDLNLTAKIA RQAGDLSECD VLEIGPGPGG
61 LTRGLLAEGA RRVLAIEKDA RCLPALAEIA AAYSGRLEVI NGDALEIDPL AHMTPPIRIA
121 ANLPYNVGTE LLVRWLTPRD WPPFWQSLTL MFQREVAERI VAKPGSKAYG RLALLAQWRA
181 EARIVMSLPP EAFTPPPKVS SAVVHLTALP EPRFPADAAI LSRVVAAAFN QRRKMLRAAL
241 KGQAPDIEDR LLAAGIKPTE RAEQVPLEAF CALARELAR
SEQDB ID: 3101377DXE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGNTNRKRR RTGSSAKTNK ADVKHMRSSK SRSRSKNNRN RPSGGNVVNR VFDSSGPEGK
61 VRGTPQQIIE KYNQLARDAQ LANDRVAAEN FQQHAEHYLR LLSEAQREID ARREEQERQN
121 RERQAERDRE RAERQDRDSI APAPVADPSS APQPDVLDLG GSDAGEEASG LVETPESKGE
181 SRKRRAPRAE EDAPASDEAG EQPKKKTPRR PRARKPAAGE GETPDPQPGG PAEAAE
SEQDB ID: 3101377DXF
Reference:
3101377
Name: modification methylase, Isotype: HemK-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVAATARLRA AGVADPARDA RLLLAHAARI EASRVTLIAP EDLAPEIAER YDQLISLRAV
61 RVPVSHLVGE RDFYGRRFKV SGEVLDPRPE TETLIEAALN APFEHVLDLG VGSGAILVTL
121 LAERPSATGL GVDLSEAACL QASANAVLHR VEARADIRRS DWFGAVEGRF DLIVSNPPYI
181 ALSEMEALAP EVRRHEPELA LTDGGDGLGA YRHIAAGAPD YLLPGGRLLV EIGPTQAQAV
241 SRLFQAAGLS GLRVIPDLDG RDRVVAAHLP R
SEQDB ID: 3101377DXG
Reference:
3101377
Name: peptide chain release factor, Isotype: 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: prfA
Sequence:
1 MIPEERLDQI TQRFQYLEAA MADGASGSDI AALAKEYSDL RPVVEQIAAW RQLCADMDEA
61 RAMLSDPDMK ALAEEELPLL KARLPEAEQA LQLALLPKDA ADARPAMLEI RPGTGGDEAA
121 LFAGDLLRMY QRYAEARGWK LELIELQETE LGGIKEVVAR ISGENVFARL KYESGVHRVQ
181 RVPETESGGR IHTSAATVAV LPEAQDVDIQ IDPGDIRIDT MRSSGAGGQH VNTTDSAVRI
241 THLPSGIVVT SSEKSQHRNR EIAMQVLKTR LYDLERQRLD RERSASRSAQ VGTGDRSERI
301 RTYNFPQGRM TDHRINLTLY KLDAVMQGDL DEVIDALAAD GQARMLAEMG Q
SEQDB ID: 3101377DXH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVKGRVCARF VAMTRLFALL LLLAPPALAD VVGPGGKTID CYCTDTSGTR IELGETICLM
61 VDGRMFMAQC QMSLNVPMWR EVQQGCLSSG LVPERRQPLL NTRAVYPKI
SEQDB ID: 3101377DXJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMLIWGMIA LAVLGLVWIR LAPSDPARWH RAPQISADRD MRGGVLRRVE TGADGLARFD
61 AIARTAPRTR VLAGSVAEGM VTYVTRTRVF GFPDYTTALQ QGDLLLIHAR NRFGRSDLGV
121 NRARVEQWLT SLGH
SEQDB ID: 3101377DXK
Reference:
3101377
Name: agmatinase, Class: EC3.5.3.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: speB-2
Sequence:
1 MSDFNQPIGG NDLARFSGPN TFMRLPQAQA LDGLDVAILG IPMDIGTSWR SGTRFGPKQI
61 RAESAMIRPY NMATGAAPFD SLQIADIGDL AINTFSLADS LRIIKESYDA ILTHDVIPVA
121 MGGDHSITLP ILRAIAARHG PVALVHVDAH ADVNDQMFGE RETHGTVFRR AYEEGLIQPD
181 KTYQIGIRGS GYAATDFTEA QGWGFQQFPA WELWHKSLVN LGTEIRRDIG DRPVYVTYDI
241 DSLDPAYAPG TGTPEIGGLT TPQALELIQS LRGLKIVGCD LVEVSPPYDT SGNTALTAAN
301 LLYELLCVLP GVQAR
SEQDB ID: 3101377DXL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDINLLVKLT ARAWSLPILA HLNRGVPGRQ APLLAATGAG RTAFAASLAH LAQLGLLERN
61 PGHGHPLRPE FRLTATGQEA AAMAARLIGT VSGTAQDALL RRSWTVPILA LTGQPRRFSA
121 IRSDLSPITD RALSVSLKQL EDHDWLRRDL DLSQRVPFPI YSAANLGAEL NRAIGLEGG
SEQDB ID: 3101377DXM
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLATLDNTI TLALSVRDRH ASAKWYRETL GFELIHHIDE AGWSEMHTLT PGVTLGLGEQ
61 AEPAPGNSVP VFGVADIATA RAAMEAAGIR FDGPTETIEG MVSTATFYDP DGNALMLAQD
121 LTQSA
SEQDB ID: 3101377DXN
Reference:
3101377
Name: agmatinase, Class: EC3.5.3.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: speB-3
Sequence:
1 MKVALEDAKK QVDEAFTNPE LKGLSFENTF GGATSFLRRL YTKNLTGVDI AVTGVPFDQA
61 VTNRPGTRLG PRAIREASAL QSPDAPYGWP FDALSELAIV DYGDVAYDYA NIPAFPDTLS
121 DHIRTILAAD VASVTLGGDH YISFPILKAY AEKYGPMSLL QFDAHTDTWA DDDMSRVDHG
181 TMFYKAVKSG IVDPARSVQI GIRTTNEDTL GVNIIDAREV HESGPAAVAQ KVRAILGDSP
241 VYLTFDIDAL DPAFAPGTGT PVWGGLSSAQ AQIILRDIAG INIKGGDVVE VSPPFDPSGA
301 TAIAGAHVAT QIICLLGWNK LGGAAAG
SEQDB ID: 3101377DXP
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVINRIADF AADMTAWRQH LHTIPELEFD CHQTAAFVAE RLREFGVDEL HEGIAKTGIV
61 AIINGQGDGP TIGLRADMDA LPIPEETGLA YASTHPGKMH ACGHDGHTTM LLGAARYLAE
121 TRNFSGRVAL IFQPAEEEGG GADIMVREGI LDRFDIAQVY ALHNAPGHAE GSFYTAPGPL
181 MAAVDTFEIH IQGRGGHGAM PHETIDPVMA ACGIAQAIQT IVSRNHYALD DLVVSVTQIH
241 TGTVNNVIPD TAYLNGTVRT FDPAVQKMVM RRMREIVAGQ AASYGVTAEL DYQVGYPATI
301 NDAAKTEFAA EVAREVSGAA NVVGDGGREM GAEDFSYMLE KRPGSYLFIG QGDSAGLHHP
361 KYNFNDEIAP VGASFFARIV EKAQPVA
SEQDB ID: 3101377DXQ
Reference:
3101377
Name: mazG family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDDTLIHDQ SAGIERLLEI MRRLRDPKTG CPWDIEQDFA TIAPYTIEEA YEVADAIERG
61 AWDELKGELG DLLFQSVFHA QMAAEAGHFT FQDVVRTMSN KMVTRHPHVF GDETRDKSAE
121 QQTRDWEAIK ATERAEKAQQ GALDGVALGL PALLRAFKLQ KRAARVGFDW GDVGPVLDKI
181 TEESRELVEA RDSLDADAIE DEFGDLLFVL VNLGRHLGVE PEAALRRTNA KFTRRFAQIE
241 TRLAAQGKTP ENSTLDEMDA LWNEVKAEEK ARP
SEQDB ID: 3101377DXR
Reference:
3101377
Name: inosine-uridine-preferring nucleoside hydrolase, Class: EC3.2.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: iunH
Sequence:
1 MPPRKIIIDT DPGQDDAVAI LLALASPDEL EVLGITAVAG NVPLPLTAKN ARIVCELAGR
61 ADVAVYAGCD APIARKLVTA EHVHGKTGLD GPDLPDPVMP LQEAHAVDFI IDTLRAHAPG
121 TVTLCPLGPL TNIATAFTRA PDIVSRVQEI VLMGGAYFEV GNITPAAEFN IYVDPEAADI
181 VFKSGAPIVV MPLDVTHKAL VTKARNDAFR ALGTPAGIAV AQMTDFFERF DKEKYGSEGA
241 PLHDPCVTAY LLNPDLFSGR HINVAVETTS ELTLGMTVAD WWRVTERAPN ALFIGDLDAE
301 GFFTLLTDRL ARL
SEQDB ID: 3101377DXT
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAALHLARP EDLDRLTAMV GAFHAEEGLQ GSEEARRDAL RPLLEGIPHG CVYLIGPARA
61 PLGYIIVTFG WSVEFGGLDG FIDEIWLRPA VRGRGIASEV LGQLPKALAS AGMKALHLEV
121 DRRNEAAQRL YARARFQPRP DYMLMSKRL
SEQDB ID: 3101377DXU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGSAAQALD DQPHDQLNHQ SGDTAPDQIA GQGAKISATR AHQAAQKLTA TQSTQRAGDC
61 VAHAAHIRLT HQFAAPGASE RATDELCDDL FHDVSLFDAV AFAA
SEQDB ID: 3101377DXV
Reference:
3101377
Name: haloacid dehalogenase, Isotype: II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSLGIGRKD RGMKPLIQAC LFDVFGTCVD WRGSVSRAVA AAVPGVEAEA FATAWRAQYD
61 PAMARVREGA RGYVALDELH LENLDTVARS FAVEIPDRVL LNAAWEQLDP WPDVVAGLTR
121 LKREVIIAPC SNGSIALMTR LARHAGLPWD CILGADIARG YKPQPEVYLA SCAALRLPPE
181 AVMMVAAHND DLIAARAAGL RTAFVPRPTE HGPGQVRDLI AQSDWDVIAG DFIDLAEKVA
241 ALGPGGGVSR AGA
SEQDB ID: 3101377DXW
Reference:
3101377
Name: enolase, Class: EC4.2.1.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: eno
Sequence:
1 MSTIIDIHAR EILDSRGNPT VEVDVVLEDG TMGRAAVPSG ASTGAYEAVE RRDGDKSRYM
61 GKGVLEAVAA VNGEIAEELV GFDATEQVAI DAAMIELDGT ENKGRLGANA ILGVSLAVAK
121 AAADFTAQPL YRYVGGTSAR VLPVPMMNII NGGEHADNPI DIQEFMIMPV AAEDIRDAVR
181 MGAEVFHTLK KELSAAGLST GIGDEGGFAP NIASTREALD FVLKSIEKAG YKPGEDIYLA
241 LDCAATEYFK DGKYVLSGEG KTLSSDENVD YLAALVADYP IISIEDGMAE DDWAGWKALT
301 DRLGGKVQLV GDDLFVTNPA RLAEGITRGC ANSMLVKVNQ IGSLTETLKA VDMAHRARYT
361 NVMSHRSGET EDATIADLAV ATNCGQIKTG SLARSDRLAK YNQLIRIEEA LGEVAEYAGR
421 SILRG
SEQDB ID: 3101377DXX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAPRPGPLR PARGFAPMNN VNGILLVVAA MAAFSIEDMF IKKLSVTVPI GQILLVLGVF
61 CSAAFLTMAV ATRKRVFSRA AWSPLLLIRA ATEAVSALTF ATALSLVDLS TVAAVFQAMP
121 LVVTMGAALF LGEQVGWRRW SAITVGFVGV LMIIRPGMAG FQPAQLLVVA SVISVAARDL
181 ITRRIDAHVA SAVVSFQAYL ALILGGAGIL LVSGTALVPV EPGHWGPYAG AILFGVLGYY
241 GIVTAMRVGE ASVVTPFRYT RLLFSLLAGV LVFGERPDWP TLAGGALIIG SGLYTFLRER
301 RLARELAAVP A
SEQDB ID: 3101377DXY
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLLATAAL CLATATAAAA CPWAGGNFEF REHGIYGDFA VNAGCTELVW DRLSNAPETT
61 ALTRSKHGWA GKLAKADVEL LDNGENLRVT GTGGAMRQVR AKRAD
SEQDB ID: 3101377DY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWQWLTNVFR LGLKELNSLR ADPVLILLIV YVFSFAVYSV ATGAKLEVSN ASVAYVDQDR
61 SALTGRILGA ILPPEFNPPQ EISAGEIESV MNSGKFVFVL SFPPSFEADV LSGHKPQIQL
121 NVDATAMAQA GNGSVFLQQI ILAEVAKFVS GDDITTTRLI DLVVRTKFNP NLNSIWFSSV
181 MQIINNITIL SVLLTGAALI REREHGTIEH LLVMPVTPSE IMVAKIWANG LVIVVAAILS
241 LWIVVQTVLA VPIAGSIPLF VCGAVLYLAS VTGLGILLAT FTTSMPQFGL LSLPVLVIMN
301 LLSGSTTPME SMPVWLQNVM QLSPSTHFVS FSQAILYRDA GLDIVWPDMV VMVALSAVFF
361 FIALKRFRVT MATVR
SEQDB ID: 3101377DYA
Reference:
3101377
Name: transcriptional regulator, Isotype: fur family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQPIIARCE AKGLRMTGQR RVIARVLEES DDHPDVEELY ARASKMDSAI SIATVYRTVK
61 LFEEAGILDR LEFGDGRARY EDAERDHHDH LIDMNSGEVI EFCDPEIEAL QERIAEKLGY
121 RLKGHKLELY GVPIRKG
SEQDB ID: 3101377DYB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTADMHAEDI IRRLELEPHP EGGWYRQTWI AENPGRASGT CIYFLLKSGE RSHWHRVDAT
61 EIWLWHAGAP LVLSMSETET GPASDHLLTP DLDAGAPQLI VPPGWWQAAR STGEYTLVSC
121 TVSPGFRFEG FELALPGFDI PRA
SEQDB ID: 3101377DYC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRPAYLGPM TIAIPFDNSY ARLPGGFYTA QAPQPVRAPR LVAFNADLAR LLGIAPGEVE
61 EMAQVFAGNA VPQGAEPLAQ LYSGHQFGNY NPQLGDGRAI LLGEVLGSDG IRRDIQLKGA
121 GRTPYSRGGD GRAWLGPVLR EYVVSEAMAA LGIPTTRALA AVETGETVRR ESALPGAVLT
181 RVAQSHLRVG TFQVFAARGE IAHLKRLTDY AIARHYPDAQ GPMGLLAAVR DAQARLIARW
241 MGVGFIHGVM NTDNSSIAGE TIDYGPCAFM DTYHPDTVYS SIDRYGRYAY SNQPDIAVWN
301 LAQLATALIQ QAEDKEAVVE EATEIVHAMP ELLERAWLEV FAAKIGIARP GEGDKALVSE
361 LLTRMAREQA DFTNTFRALG APRARDQFTD PTAYDSWAED WRQRLTQEAT PEAVIRAANP
421 AFIPRNHRIE QMITAAVEGD YTLFERLNTV LARPYADQPD HIDLTRPPSA SEIVPATFCG
481 T
SEQDB ID: 3101377DYD
Reference:
3101377
Name: drug/metabolite exporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRTRPSCGR MEEKRPVDAA GAVALIGIAA LLAFNQVVIK VTGGGFGPLF QAGLRSALGL
61 VFVLIWMRLL RKPIVFPRAA LMGALITGLL FTVEFMALFA ALDLTSVSRV SILFYSMPVW
121 LALGGHFLLP GERLSGMRVL GLMLAMGGVV LALLERDAAH VSLLGDALAV FAAMCWAAIA
181 LGVRLTPLGR VPAEMQLMSQ LVISAPLLLV LAPLTGETLR TPGLLHWAGL LFQAVGVVGL
241 GFLIWFRLLA VYRANGVASF SFLSPVLAVI LGWLLLGEQV GPLVWLALGL VAAGIVLINR
301 R
SEQDB ID: 3101377DYE
Reference:
3101377
Name: endonuclease/exonuclease/phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHSQTLRLAS YNIQKCVGLD LRRQPRRILQ VLDAMGARIA VLQEADKRLP PRPAALPHFV
61 LEEAGWQVVD LGGAGSLGWH GNAVIWKGAG ITQLASAHHD LPGFEPRGAV RVEFDTPIGP
121 LRVLGLHLGL LPASRRDQIV HLAHDLERLP PMPTVWAGDF NEWSRQPVLD HLAPMLRFLP
181 ARPSFPAPRP LGALDRIAHS PELSAVAHGV FAERPAPIAS DHLPVWADLT RPV
SEQDB ID: 3101377DYF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTALGAMSGT SLDGVDAAVV ETDGLAIFGF GPVGYRAYSP EERAVLRAGL GRWAGPEVEA
61 AGDLVTRAHA QALAGFEGVD LVGFHGQTLA HEPRGRGTLQ VGDGAALAAA LRRPVVWDFR
121 SDDVQLGGEG APLAPFFHFA CAKWIGATEP LCFLNLGGVG NLTYVDPSFE RPEVPGALLA
181 FDTGPANAPV NDLMQARLGL PMDEGGAVAR GGTVETGALE LFLAEPYFSR MPPKSLDRND
241 FAEMIGLVSE LSDSDAVATL TGMCAAAVAQ GMEHCPRPPA RVLVTGGGRH NPVLMEMLQV
301 SLDCAVEPVE CVGLDGDMLE AQAFAYLAVR VARGLSTSCP GTTGVGALVG GGMVSLPDEA
SEQDB ID: 3101377DYG
Reference:
3101377
Name: Tyr-tRNA synthetase, Class: EC6.1.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tyrS
Sequence:
1 MTYHPKSDFI AVMMERGFLA DCTDYQGLDE ALMKGCQPGY IGFDATAKSL HVGSLIQIMM
61 LRWLQKTGHK PITLMGGGTT KVGDPSFRAD ERPLLTPAQI DDNIAGIRKV FAAYIDYDSG
121 AENAALMLNN EEWLDDLNYL DFLRDIGRHF SVNRMLSFES VKSRLDREQS LSFLEFNYMI
181 LQAYDFMELN RRYGCILQMG GSDQWGNIVN GIDLTRRVID HEVYGLTSPL LTTSDGKKMG
241 KSQDGAVWLN PDMRSPYEFW QFWRNTTDAD VGRFLKLYTE LPVGECDRLG ALAGSEINAA
301 KVILANEVTA LCHGAEAAAT AEATAREVFE KGGIGDDLPT LTLGAADLPA SIVQLIVKTG
361 LAKSGKEAKR LIAEDGARLN DAPLTDAGMM IEAGDLAAPI KLSAGKKRHA LVQLG
SEQDB ID: 3101377DYH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQVYRQILP GARITRAAAF LVACLLSLLL VGLPWLVLLL
SEQDB ID: 3101377DYJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFDAALPDTV PLQQSAEFAA ALSLCGRRAL RLEDGTLLLC RPIAGVPLLL ASRARLVPDT
61 LPALLARARL HRRAILLNPD APSAELARLG AVPLVTPAHV AELDLTGDLR AGLHQKWRNR
121 LRHGEGQELI VTRQTLPQTP DHWLFRAEAA QQRARGYRTW PTEVTLAYGR ANPGAAKLFT
181 ARQGKTPVAA LVVLRHGSGA SYHIGHSTPA GRALSAHNLL LWRAMTWLAA KGVRHLDLGP
241 VDTETTPGLA RFKLGTGARA RPLGGTWAWW PPLGKTLRPL ARLDHARMFQ SWTDTPAPDY
SEQDB ID: 3101377DYK
Reference:
3101377
Name: 3-hydroxyacyl-CoA dehydrogenase, Isotype: II, Class: EC1.1.1.35
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLDTTAAVI TGGASGLGEA TARYFAEKGA QVTILDRDSA RGETVADEIG GHFAQTDVTS
61 EDSVAAAIAH AMEKMGKITA AVNCAGIAYG IKTVGKEGAH PLDAFQRTID INLVGSFNVA
121 RLAAVEMARN EPEPDGARGV IINTASIAAF DGQKGQVAYS ASKGGVVGMT LPMARDLAST
181 GIRVMTIAPG IFLTPMLMGL PDEVRAGLAA DVPNPARLGD PREYGRLAGF IVEMGYLNGE
241 VIRLDGALRM R
SEQDB ID: 3101377DYL
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARIPLLQMT GISLTFGGEP VFSDLDLVVQ PGDRVALVGR NGSGKSTLMK VMAGLVEADA
61 GEIVIPPGKS VGYMEQDPTM SGFATLGDYA ASALEPGELY KVERAGEGLK FDPARAIETA
121 SGGERRRAAL AKLMAEAPEL MLLDEPTNHL DIEAIGWLER ELSATRAAFV LISHDRAFLR
181 ALTRATLWID RGMVRRQERG FEDFEAWRDK IWEDEDTARH KLNRLIKSES RWAVEGISAR
241 RKRNQGRVRA LQALRAERAA QIKRQGTAAM SLDAGPKSGR KVIEAKGLTK AFDGKPILRG
301 LDLTVLRGDR VAFVGPNGVG KTTVLKMLLG QVDPDTGTVR LGTNLEVAVF DQTRAQLDPE
361 MSLWDSLTSD PEMRVSGKAD QVMVRGQPKH VVAYLKDFLF DERQARAAVK SLSGGEKARL
421 LLARLMAKPS NVLVLDEPTN DLDVETLDLL QEILDDYDGT VLLVSHDRDF LDRVATTTVA
481 MEGDGRAVVY AGGWSDYRAQ RGEDAPKEDV KSKPSAPKIK QEMKVKSGLT FSEKHRLEAL
541 PAEIARLEAE IAKLQELMAD PELYTREPVK FQKATEALVQ RQEKLSALEE EWLALEEKAE
601 AG
SEQDB ID: 3101377DYM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGVGPLGLT CSVEGRVMPD AILLSKGRYR ARLARGPEDV AAAQALRTLA FRTTTPDRDH
61 FDALCDHVLV EDMRQGDMLV CCFRMLTMEG GAEIGRSYSA QFYELTGLQS FEGRMVEMGR
121 FCIHPDHHDA DILRVAWGAM TTFVDRTGVQ MLFGCSSFAG TETADYLDAF AMLKHRHLAP
181 KRWLPRVKAP DVFRFAARLR RKPDAKKAML RMPPLLRTYL LMGGWVSDHA VVDRQMNTLH
241 VFTGLEIGAI PPARKRLLRA VAG
SEQDB ID: 3101377DYN
Reference:
3101377
Name: lipoprotein, Isotype: SmpA/OmlA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKTAGLLKP VFRIVAIGLT AGVLTACTAI YRNHGYVPTA EELAAIQVGV DTRDSVVEAV
61 GTPSSSGLLN ESGYYYVASR MRHYGARAPQ VVSRELVAIS FDQRGVVRNI ERYGLEDGRV
121 IPLERRVTSS SVEDKTFIRQ LLGNLGSFNP ANVIN
SEQDB ID: 3101377DYP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASRAFYPDY RNLCSGSTDE SSSMSDETVL RVADLPQNSV TSFDLRPAPA QLAEIAQQLG
61 LDGLRKLRFS GTLRAEGKRD WRLEADLGAT VIQPCVVTLD PVTTRIDTPL TRLFLADWAD
121 PDEEEAEMAT EDDEAEPLRD TIDLNAVMCE ALALNLPAYP RKEGVELGQA GFTEPGKQAM
181 TDEETRPFAG LAALRETLKK DS
SEQDB ID: 3101377DYQ
Reference:
3101377
Name: ribosomal protein L32
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmF
Sequence:
1 MAVQQNKVSK SRRNMRRAHD ALVAANPNEC GNCGELKRPH HVCAACGHYD DREVVAQADE
61 IELDEDAA
SEQDB ID: 3101377DYR
Reference:
3101377
Name: fatty acid/phospholipid synthesis protein, Isotype: PlsX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: plsX
Sequence:
1 MTAQPDQTGS ASGQIIISVD AMGGDAGPSV VVAGIAKSAK KNPQVGFILH GPEDTLKKLV
61 AKRRVLDGRV VFRDCPDVVT MEDKPSQVVR NGKNTSMWST LESVRNGEAA GAVSCGNTGA
121 LMALSMLRLR RLPGVTRPAI AILFPSGNPQ GFNVLLDAGA DIRADARDLL QYALMGASYA
181 RNGMNLLRPR VGLLNVGTEE HKGKAELKEA QALIAEYAER ANYEFVGFVE GSDIPGKRCD
241 VIVTDGFTGN VAIKTGEGTA RMIGSLLREA FKYSPLSRLA SLLAVTSLRR LSKRIDPRRV
301 NGGVFLGLNG TVIKSHGSAD DTGISAAVKL AFTLAQSGFA ERLAARVASA AALTQDEAAP
361 TGAQAEKQES R
SEQDB ID: 3101377DYT
Reference:
3101377
Name: 3-oxoacyl-acyl carrier protein synthase, Isotype: III, Class: EC2.3.1.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabH-2
Sequence:
1 MAGRAVVKGV GHYLPERVVP NAAFEKTLDT TDEWIRSRSG IERRHFAAEG ETTSDLATRA
61 AEAALADAGI SAEQIDAIVL ATSTADLTFP SAATMVQARL GMTNGYAFDV QAVCAGFVYA
121 LSNANALIVS GQAKRVLVIG AETFSRIMDW TDRSTCVLFG DGAGALVLEY EEGEGTPQDR
181 GILSVDLNSD GRYKDLLYVD GGVSTQTTGH LRMQGNQVFR HAVEKLAQTA ETALDKAGLS
241 SADVDWIVPH QANIRIIQGT AKKMGLPMDK VVVTVQDHGN TSAASIPLAL SVGKARGQIK
301 TGDLVVTEAI GGGLAWGAVV LRW
SEQDB ID: 3101377DYU
Reference:
3101377
Name: integration host factor, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ihfA
Sequence:
1 MSDKTLTRMD LSEAVFREVG LSRNESAQLV ESMLNHMSDA LVRGEQVKIS SFGTFSVRDK
61 SARVGRNPKT GEEVPIQPRR VLTFRPSHLM KERVAAGNRK
SEQDB ID: 3101377DYV
Reference:
3101377
Name: transcriptional regulator, Isotype: MerR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKSPDAFRT ISEVAEWLGV QAHVLRFWES KFNQVKPVKR AGGRRYYRPA DMQLLGGIKK
61 LLHDDGMTIK GVQKLLREQG VAHVAEQSQD LEDSATPAPE SGGNVVRFKA QPADIDEALQ
121 FDMDLGEPVP TEVLQKIVSD SAPALADEDD DDSEGDVEIL SAPRQETAET PEPAQADMAE
181 EEEVQAPRPL AIEVADIPAD DVIEAEPGPL SALADIHVLP VAAQSGIRPL AAELQAWLDR
241 QAG
SEQDB ID: 3101377DYW
Reference:
3101377
Name: 2''-deoxycytidine 5''-triphosphate deaminase-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGVCPNQQI EAMIAGGEIR AEPPVLPEQI QPASLDLRLG TVAYRVRASF LAGAGHSVAD
61 RLAEFEMHRI DISQGAVLEK GCVYLVPLME SLALPAQINA VANAKSSTGR LDLLTRTITD
121 GGTEFDRIPA GYTGPLYAEI CPRSFSVLVR PGMRLNQIRF RRGQAVLDDT ALRALHAEMP
181 LVDGPAVIQD GLGFSVDLRL PGSDLVGYRA KPHTGVIDLD RIGAYDPAEY WEEVRSRDGR
241 IILDPGAFYI LVSREAVHIP PLYAAEMAPY LAMVGEFRVH YAGFFDPGFG HAQAGGAGSR
301 GVLEVRCHEA PFVLEHGQIV GRLVYEKMAE QPTQLYGAGI ASNYQGQGLK LSKHFKTPA
SEQDB ID: 3101377DYX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMLCLCTGSN EEKLMNVNQL IDMVIRTVIR RAVNGGVNAG FDAVSNMGRK SRKAPPPEQH
61 EPDPERERIR EMRQARRAAR NEQEL
SEQDB ID: 3101377DYY
Reference:
3101377
Name: segregation/condensation protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: scpB
Sequence:
1 MNDAPEDRTE SLFEAPPMAE QERMVEAVLF ASPDPVGVGD LAARMPHGSD PAQALEMLRK
61 RYEGRGVRVV QVGEGWAIRT APDLGFLMQK ETVETRKLSR AAIETLAIIA YHQPVTRAEI
121 EEIRGVSVSR GTIDQLLEME WIRLGRRRMT PGRPVTFVVT PHFLDHFGLE SARDLPGLKE
181 LRAAGLLENR PPPGSLPIGE ARDEGDEDTG QPELFEED
SEQDB ID: 3101377E
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFIWAALGL VCVALALIGV ALPLLPTVPF LLLAAFFFAR SSERLHTWLV THRLFGPMIL
61 DWQQSGAIRP GAKKAATLSI AAVFGLSLVF AVPSHVLLIQ AVVLSGVLIF IWTRPNG
SEQDB ID: 3101377EA
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding/permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPAPVASLS AVTHRYGSTL ALSDVTLDIP AGCMAGLIGP DGVGKSTLLA LIAGVRKLQA
61 GGAIVLGGDI TDRHHLRACN HRIAYMPQGL GRNLYPTLSV YENLDFFGRL FGQSEAERRA
121 RINNLLTATG LDPFPDRPAG KLSGGMKQKL SLCSALIHDP DLVILDEPTT GVDPLSRQQF
181 WDLIDHIREE RPAMSVIVAT AYMEEAERFD WLAAMNAGQV ISTGSPIEIR NAAGQPTLEK
241 AFIAMLPEAD RQGHRIDEVP PRRPVIGPPA IEAKGLTCRF GDFIAVDHVE FQIEPGEIFG
301 FLGSNGCGKT TTMKMLTGLQ KASEGKALLF GEALNPDDMA TRRQVGYMSQ SFSLYGELTV
361 RQNLELHARL YQLPIETRAE RVAQMLHDFD LAEEADKRPD GLPLGIRQRL QLAVAVIHSP
421 EVLILDEPTS GVDPVARDGF WRHLIKLSRD DGVTIFVSTH FMNEAARCDR ISLMHAGKVL
481 AVGTPEDLAR SKDTDDLEEA FVGYLREAAG NTDGRASETP AAKLPDRLEK PDRLFDLARL
541 WAFARRESIE ILRDPMRLAF AFLGPVILML TFGYGISFDV QELPYAVLDR DKSAESRNLM
601 QSFSGSRYFV ERPAAGSVTE LDIRMRSSEL VIAVEVPPGF GKSLLRGDQP EVRVAVDGAM
661 PFRAETTRGY LQGLAASYMS DQTERLYGHA FDPSAASVET RFRYNQAFKS VFALIPSVIM
721 LMLVLIPAMM AAMGVVREKE TGSIANFRST PVTRTEFILG KQLPYVAIAM LSFASLIIVS
781 YGVFGVLIKG SVLALLVGTL LYVLATTGFG VLVSTFTRTQ VAATFAAAVI SIIPAVNFSG
841 LLVPVSSLSG GGRLIGLSFP SSWYQQISMG TFTKGLGFPE LWLNHVALAG FAALFIAVSV
901 LALNKQET
SEQDB ID: 3101377EAA
Reference:
3101377
Name: segregation/condensation protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: scpA
Sequence:
1 MTSPPPRRNY LASWAGRCMT DNLFSEDQTT VAERLAAEAL IVDVDGFEGP LDVLLTLSRT
61 QKVDLRKISV LELARQYLAF VERAKALRIE LAADYLVMAA WLAFLKSRLL LPPDPDEDGP
121 SGEELAAHLA FQLERLQAMR DSAARLMGRD QLGRDFFRRG KGEDIARIRT VTYSASLLDL
181 MQAYARIRTR DEFRPFVMDR DKVYTMEQAL ERMRGLIGFA GSWTDMASYL PEGWGKDPVR
241 RRSATAATFA ASLQLVKEGH LEIRQSELFA PIHLRKKDID T
SEQDB ID: 3101377EAB
Reference:
3101377
Name: beta-N-acetylhexosaminidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFGATILDA EGLRLSTDEK ALFREADPFG FILFARNVDS ADQVRALCAE MREAVGRDCV
61 ITVDQEGGRV QRLRPPLARN WLPPLDHVAR AGTGAERAMY LRARLIAHEL RAVGIDSNCA
121 PMLDLARDET HPFLRNRCYG SDPETVARLG RAVAQGHLDG GVLPVVKHMP GHGRATLDSH
181 HDLPHVALEA EALDGTDFAP FRALNDMPMG MTAHLVYDRI DPRPATISPV MMALIRERIG
241 FQGLIMTDDI SMKALAGSIA DKTARALAAG CDVALVCNQT LAERAAAAGA AGRMSAQAQA
301 RAERALALRQ PPGELDIPAA EAELSRVMGG QVYDG
SEQDB ID: 3101377EAC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLFLVSLRRR RCGNSKHHRP NRRPEAGTRK PSRDQRVARQ GSEADMASFD YAGHVNPNQV
61 RYSYQMPGMG LDVEDEIPDE DTGEDYGHAP GRPGLARAMS IAGAVGSLVL VVGVGIWGYK
121 LVMRDVSGVP VVRAVEGPMR IQPDNPGGTP ADHQGLSVNT VAAAGSAAPP ADRLVLAPRP
181 VSLSEDDLPM EDLRAIPASL EVDAADPEAV EAFRNGDIDR LVAELTEGAA PLAERETALL
241 DEGTSRTASI ELPEPLEAID PADLLAENPQ LALVDEPGVA RSLRPQTRPQ RSVPTATEAR
301 DAMNAAVTAA VGAATAVDLD PASLPVGTRL AQLGAYDSPE IARAEWDRLN GRFGEYLDGK
361 QRVIQEASSG GRTFYRLRAA GFGDLAEARH FCSVLVAERA DCIPVTTR
SEQDB ID: 3101377EAD
Reference:
3101377
Name: Arg-tRNA synthetase, Class: EC6.1.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argS
Sequence:
1 MNLFTEMRGL VLEALEQMQA EGALPQGLDF ANVAVEPPRD AAHGDMATNA AMVLAKPAGQ
61 KPRDIAETLA ARLAADARVA KAEVAGPGFL NLTLAAPVWQ RVVGTVLLDG TAYGRSDMGQ
121 GKKVNVEYVS ANPTGPLHVG HTRGAVFGDA LASLLDYAGY QVTREYYIND GGAQVDVLAR
181 SVYLRYLEAH GQAVEFVDGT YPGEYLVEVG QALKDKVGDA YVGQPEEVWL EAIRDFATDA
241 MMELIRADLA QLGVKMDVFY SEKSLYGTGR IEAAIDSLRA KGLIYRGTLE PPKGKLPEDW
301 EPREQTLFKS TEHGDDVDRP IMKSDGAWTY FAPDIAYHYD KVSRGFDALI DVFGADHGGY
361 VKRMKAAVSA LSDGRVPLDI KLCQLVKLWK NGEPFKMSKR AGNFVTLRDV VDQVGADVTR
421 FVMLTRKNDA PLDFDFDKVL EQSRENPVFY VQYAHARVSS VLRRAAEAGI DTSDTALRAA
481 DLGLLGHEAE LAVMRKLAEW PRLVEIAART NEPHRIAFYL YELAGDFHAL WNRGNDVSEL
541 RFIQDGDEGT SQAKIALARS VAVVISAGLA ILGVTPAEEM R
SEQDB ID: 3101377EAE
Reference:
3101377
Name: deoxyguanosine triphosphate triphosphohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRAGFASDP GRARGRLVPE EESGFRSCFQ RDRDRIIHAS AFRRLKHKTQ VFVEHEGDSY
61 RTRLTHSIEV AQVARTIAGA LGLNPELTEA VALAHDLGHT PFGHTGEDAL HALMAPYGGF
121 DHNAQAIRIV TRLERHYAAF DGLNLTWETL EAIAKHNGPV TGALPWALAE CNATFDLELD
181 THASAEAQVA ALSDDIAYNN HDLHDGLRAG LFSDDEIAEL PIVGDCYAEV DRTYPDTDAY
241 RRRHEALRRV FGVMVADVID TSRAALAGSG AESVADIRHL GRPVIRFSDA LWSDLRQIRA
301 FLFTRMYRAP SVMVVREQVA RVVEELFPIY LGDPRQMPRH WHGEIDAAPD ETALARIVSD
361 YVSGMTDRFA LQDHARLTGR DPIRH
SEQDB ID: 3101377EAF
Reference:
3101377
Name: Fe-S cluster assembly family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPPKVTDR AFARLAEIGA ADQGQALRVA VEGGGCSGFQ YEIALDAPKS DDLVLEGQGQ
61 RVVVDAVSLP FLENAVIDFS EELIGARFVI DNPNATASCG CGTSFSI
SEQDB ID: 3101377EAG
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAALTGGGL VLAYTAVISS ADAITKLIAQ GYAAPQLYAI SGLIVAAISL AAARRNRARA
61 LKTVCPRAMA LRALATVVAS LCFFHTFRLL PFADVFVFIG LMPIMAALMS GLMLDEHARP
121 AAWAALVAGF VGVLCLMPGG IGAIGAGHLW ALGGVVTGTF SLILSRYIGR YESNALAQVF
181 YPNLALGLSM AAALPFVWVP MPMLDLAWVG AYAALLFLAR WLLVIALRLL AAYVVTPLLN
241 LQFVWMVALG ALAFGEWPAP MTWLGAAIVM VSGLYLIWDQ MTPTTREQEE LSLRTDP
SEQDB ID: 3101377EAH
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKSFSNTGS PATVRGSSTP TLGDRPMTAM LKINQIQGEI KDGASMMDGD VTGLFSSGSA
61 PMASASALMG EGAQMFSTSC EASGRDTTTG EGVQMFSTSC EASGRDTTTG EGVQMFSTSC
121 EASGRDTTTG EGVQMFSTSC QKTGAVAVKL GEGTQMFSSG S
SEQDB ID: 3101377EAJ
Reference:
3101377
Name: exo-DNase, Isotype: III, Class: EC3.1.11.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xth
Sequence:
1 MKIATFNING IKARAEALPA WLDSAQPDVA LLQEIKSVDE SFPREMFEER GYNVETHGQK
61 GFNGVAILSK LPLEDVSRGL PGDDSDEQAR WIEATVVGKQ ALRLCGLYLP NGNPVELTES
121 GDPVPGGKYD YKLRWMERLQ ARATELMAAE EPALMAGDYN IIPQAEDAKR PEAWREDALF
181 RPESRAAFRR ILNLGFTEAF RARVQGPGHY SFWDYQAGAW NRNDGIRIDH FLLTPQAADL
241 MRDCGIDKEV RGRDKPSDHV PVWVELDI
SEQDB ID: 3101377EAK
Reference:
3101377
Name: salicylate hydroxylase, Class: EC1.14.13.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nahG
Sequence:
1 MFGTRIIVVG AGIGGLAAAL ALKARGADVT VLEQADAIAE VGAGIQVSPN GAAVLGALGL
61 GPAFEAISVR GRAVVLSDYR RPGEVLRLDL MRHAGDQRYA FVHRADLIDL LAGAVRRAGV
121 NVRLLQKVDR VDPGSPPVLH MCNGAHLTAD LVVGADGLHS RARAALNGAA KPFFTGQIAW
181 RATVPNTVGL PDEARVFMGP GRHLVCYPLR GGSLVNLVAV QERADWTAES WSQSDDPANL
241 RAAFADFTGL PAALLAQVRA PGLWGLFRHP VAETWHRGRV TLVGDAAHPT LPFMAQGANM
301 ALEDAWVLAD ELGKAPGIEL GLAAYQDRRQ ARARRVIAAA NGNAWKYHLR APLRGPAHLA
361 LSLGGRLAPA RMVRQFDWLY RHDVTRGA
SEQDB ID: 3101377EAL
Reference:
3101377
Name: dnaK suppressor protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEHITETDV VGQTEGAQMK PESFLPEDYS PAEDEPFMND RQLEYFRRKL INWKHELMAG
61 SRDTIEGLQD GTRNIPDVAD RASEETDRAL ELRTRDRQRK LVAKIDAALR RIDEGEYGYC
121 QVTGDPISLK RLDARPIATM TLEAQERHER REKVHRDD
SEQDB ID: 3101377EAM
Reference:
3101377
Name: ATPase, Isotype: AAA family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTARFQGTAE YVATDDLTIA VNAAVTLERP LLVKGEPGTG KTELARQVAG ALGLRMIEWN
61 VKSTTRAQQG LYEYDAVSRL RDSQLGEERV HDVGNYIKKG KLWQAFDSDE KVVLLIDEID
121 KADIEFPNDL LQELDKMEFH VYETGQTVRA RQRPIVIITS NNEKELPDAF LRRCFFHYIR
181 FPDEATMRRI VEVHHPGIKE SLLTAALTQF YEIRETQGLK KKPSTSEVID WLKLLLAEDL
241 SAEDLRRDGA NALPKLHGAL LKNEQDVHLF ERLAFMARGK R
SEQDB ID: 3101377EAN
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGLVSLSSS NKMTVTSALS RTISRPLVRA LALVSGLGLA ACDTVPLEDT PTRAQTPGLS
61 LEPMKSFGAT RVQPPQRSNG NIAADFLALH FQLESGRDLP VFTRFETPIT VRVTGSPPAS
121 LQPDLTRLLG RLRSEAGIDI RQVSEAGASI TIEAVSREEI GRALPHAACF VVPNVSSLAE
181 FRRDRRKDKT NWANLRKRER LGIFVPYDSS PQELRDCLHE ELAQAIGPLN DLYSLPDSVF
241 NDDNIHTILT GFDMLVLRAT YAPELRSGMS RDQVTAVLPD LLGRLNPRGV TVAARPVVTT
301 PRAWIDQVQA ALGPGVAFQT RLDAANRAAQ MAQSWGWTDQ RRAFGHYMLG RMLQTADPDL
361 AQRHFLTAMQ VLQSTPGTRL HQAYVTTQTA AFAISRGDGA GALAQLRPMR DVAAQAENAA
421 LLATLMMLEA EALTLLGKTD AARDLRLDSV GWARYGFGSD WAVRAKMQEI ASLNPRNALG
481 G
SEQDB ID: 3101377EAP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVIAAALFG ALLGGLTAKR RNGTTADIAQ YAAGYAIAFA LLGMIATLVI HRLMV
SEQDB ID: 3101377EAQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFLPFFENLR KAGVPVSLRE YLTFLEGMKK GLATYDVEAF YYLARVSMVK DERNIDKFDR
61 AFAASFKGLE DITFEQVMEA VDIPADWLEK MAEKHLSPEE KAEIEALGGF DKLMETLRER
121 LKEQEGRHQG GNKWIGTAGT SPFGAYGYNP EGVRIGQKES RHQRAVKVWD KREFKNLDDT
181 VELGTRNIKV ALKRLRRWAR EGAAMELDLD GTIRATAEHG YLDVKERPER HNAVKVVLFL
241 DVGGSMDPHV KVVEELFSAA RSEFKHLEYY YFHNCLYEGV WRDNRRRWDA QIPTHEVLRT
301 YGPDYKCIFV GDASMSPYEI AYPGGANEHW NQEAGQVWLA RAREQWASNL WINPVPEKYW
361 DYTHSIGMIR EIFDDRMVPM TLSGLEQGMR VLTR
SEQDB ID: 3101377EAR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTRLTLLIA FALPLMGCSE PEPEPVQILE APAFDKLGNP VCPEGYSLSA TETGEPVCVG
61 VAF
SEQDB ID: 3101377EAT
Reference:
3101377
Name: peptidase, Isotype: M48 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRVTPILLA VLYAFAMYHF SAWRTRRELD ARSTELADPA LKRLTDRLAA ALGVARVPVH
61 IYEIDPVNGL AAPDGRIFIT RGFYRKYQSG EVTGEELTSV IAHELGHVAL GHSRRRMIDF
121 SGQNAMRTAL AMLLGRFIPF FGVWIANMLT TLLAARLSRA DEYEADAYAA ALLTKAGIGV
181 APQKALFHKL DALTEQRAGV APAWLLSHPK TAERIAALDR LEARWQAH
SEQDB ID: 3101377EAU
Reference:
3101377
Name: bacterial luciferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPDPTRMLY SLLDLAPVPE GSDIPEALAN SADLAAHAEA LGYHRYWLAE HHNMPGIASA
61 ATAVLIGHIA SRTSTMRIGA GGIMLPNHAP YMVAEAFGTL ASLYGDRIDL GLGRAPGTDM
121 ATARALRRGL SQQDSFPQDV IELIGFLGPE DPEARVRAFP GQNTHVPVWI LGSSLYGAQL
181 AAQLGLPYAF ASHFAPQALE EALQVYRRSF RPSVYLGQPH AMMAINVFAA ETDAEGVRLR
241 TTMQQAFARL RLGRPGKLPA PVDDIAAHLD RATLAGVNAA LSVSAVGSPE TVRADLTHVI
301 DRYQPDEVIL TGQIHDHTAR KRSFEIAAGI LRSL
SEQDB ID: 3101377EAV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAVLDTCVI YPTVMREMLL GAARLGHFTP LWSARILEEW ARAAVKLGPA GEAQARAEIA
61 LTRAAWPRAE VPPAPGVEAR LWLPDPADIH VLATAIAGSA DVIVTLNRAD FPRNILAEEG
121 LERIDPDAFL LQFFNDDPAG FARMAEKVLD EANRLSGETW TLRSLMKKAR LPRLGKALEH
181 HRSE
SEQDB ID: 3101377EAW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPSDVFDR PRIRLKPKAN ARAIRHGAPW VFDNEVVTDR RTRKIAPGTV AVLEDDNRAP
61 LGLVAVNPGS RILARMLDRD PEAELNAAWF EARLTRALAL RERLFDAPFY RLVHAEADGF
121 PGVIIDRFGE ACVIQPNAAW AEAHLELLSA ALIKVTGVST VLKNASGRTR ALEGLDDQNA
181 VLAGAAPTAP VPVLMNGATY MADLTGGQKT GLFYDQRPNH AFAARLAGQG TRVLDVFSHV
241 GGFALAMLAG GAGSALAVDG SAPALALAEQ GALASGLAGR FETRQGDAFD VLTALAEEGE
301 TFDVVICDPP AFAPSKQALD AGLRAYERVA RLAAALVRPG GYLGLCSCSH AADLSRFREA
361 SVRGIGRAGR SAQLIHTGFA GPDHPQLPQL AESGYLKAVF FRL
SEQDB ID: 3101377EAX
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTMRMILLA GLGLSVAACT AVDVPTRNAP YEQLPNTSVA APAGYDLLQP EYRVQPAAAV
61 GQVMIPQTDS VARAATQDPG NPALAAGQAP VSINSVTVLV PRSLKVSERN SYLPRGDIVW
121 REDPIGDRHA QVQKIVQDAM VRGVSPLSGP VKADLEIVVK RFHALTEKAR YTTGGVHAIT
181 FDIVLKDPAT GAQLMPPREV RADLEAFGGQ QAINAEARGQ TQKVRITGHL AEVIRQELTN
241 PEGYKNASLG IIQVMNRL
SEQDB ID: 3101377EAY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKTGDPHDP KGLIYEAYRI EGITAPECRT IFLDWALSLP VGSDQRASLA DLHGRYGAEA
61 PDHPMTAVMQ DGLAAEQAPR RRGGWRSRPR N
SEQDB ID: 3101377EB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCLRGTAAKL SSGSLGDLAG TEMRRRPMQW KRYGTVAVIL SVLLGGAYVF WLDSQTAELP
61 AGIVRSNGRI EAERIDVATK LPGRIAEVRV SEGQWVEAGS LVAHMDTAEI DAQLRQAKAA
121 VAQAEQQKLQ TEALLNQRLS EQEFAQAEFA RAEQLAARGH APQELVDQRK SALTTADAGV
181 AAARAGIDLA TATIASADAT VERLQSIRAD ADLVAPHDGR VQYILAKAGE VVGAGGRVVT
241 LTDLTDIYMT IFLPARDAGL LAIGSEARIV LDPIPEYVIP ATVTFVASTA QFTPKSVETA
301 DERDQLMFRV KLTIPEDLLK AYQEQAKAGV AGVGYVRTDD TAPWPDVLSV KLPQ
SEQDB ID: 3101377EBA
Reference:
3101377
Name: Glu-ammonia ligase adenylyltransferase, Class: EC2.7.7.42
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnE
Sequence:
1 MSTRLAITRL PRAYDPDLGA EARALLPDLG GDLADLVAGT GGTSPYLMGL MRAEAAWLAP
61 ALNDADAAVA AELAAARALP PDQLKPGLRR AKRRLALLTA LADLAGAWPL EKVTALLTDF
121 GALAADLAAK AEIAALIRRG KLPGQTEADV ETAAGMVILA MGKMGAHELN YSSDIDLIVL
181 FDETRYDPDD FFEARQGMVR ATRNFCATLS DKTADGYVFR TDLRLRPDPA VTPVCLAMEA
241 AEHYYESLGR TWERAAYIKA RPCAGDLAAG ARFLETLRPF VWRRHLDFAA IQDAHDMRLR
301 IRENKGTGGA LTIAGHDMKL GRGGIREIEF FTQTRQLIAG GRDRDLRLRG TVEGLAALAA
361 KGWVPSEVAE ALTRHYRAHR EVEHRIQMVH DAQTHRIPQT EEGIARVACL MGIDATELRA
421 DLTRRLTEVH GLTEDFFAPD TGAAPAPAMP AEVVFDDNVL SRWPTYPALR SQRGRRIFER
481 LKPELLARLA RTAKPDEALL ALDGFLAGLP AGVQLFSLFE ANPQLIDLLV DIVGTSHTLA
541 TFLSRNASVF DAVIGGSFFD DWPGGAALRA DLAERLAAED DYETRLDMAR RWTKEWHFRI
601 GVHHLRGLID GARAGAQYAE LAEAVISALF PVVEAQFARK HGNPPGRGAT VLGMGSLGAG
661 RINAQSDLDL IVIYDPEDAE GSDGPRPLAT RPYYARLTQA LITALTAPMS QGRLYEVDMR
721 LRPSGTQGPV ATSWTSFTEY QLNEAWVWEH LALTRARPVA GSVALGEDIE RFRQELLNRP
781 ADRDKVLREV GEMRARLAAA KQPAGVWDAK TGPGRMLDIE LVAQTGALLS GSAARDVAQG
841 LQGAVAAGWL NVADAQSLTR AYDLCWSVQT AARLLSGEMI DAERIGEGGA AFLCRSTGFQ
901 DMASLQAALE TTYAEAAALI GAAVGGTEDA EDG
SEQDB ID: 3101377EBB
Reference:
3101377
Name: YbaK/Pro-tRNA synthetase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKSLKRVRA ALEAAEITTE IRETGNARTA EDAAAAVGCA LNQIVKSIIF QARDGDALAL
61 FLTAGGNQVD PDAATALFGK PLARADADTV RRKTGFAIGG VAPVGHLSPP RCFLDPALMG
121 FPLVWAAAGT PRHVFAIAPD RLHSLTGARI ADFVKVG
SEQDB ID: 3101377EBC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTSGANRSS HDRLQRENRM QSGWWLLPGV LLGGGCWAVL LSQALTLI
SEQDB ID: 3101377EBD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLCIPAGWEF GHDSHWFARI PERMRAVVSN GIVVFSRFAG AVGGDTSDHF VGQYLAPAQE
61 ERRLGRQCNP
SEQDB ID: 3101377EBE
Reference:
3101377
Name: 6-aminohexanoate cyclic dimer hydrolase, Class: EC3.5.2.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nylA
Sequence:
1 MKLSEYASYD ATGLADLVAR KEVSADELTD AARRGIAAVN PQLNFMVDTI APPIAGDGSG
61 AFAGVPFLIK DIMMTAAGVP QGMGTRLLDN DVYVAPHDGE LMRRFKAAGL NTLGRTTTPE
121 FGFNATTESV ATGPSRNPWD PSRTTGGSSG GAAAAVAAGV VPMAHANDGG GSIRIPAACC
181 GVVGLKPSRG RTPLGPDAQL AILGLGIEFA VTRTTRDAAA LLDLVAGPEA GSFIPLANPV
241 TSYSDSIKTP MQGLRVAIAP TGFQGAAPTD AGMSAEVVRV GKLLADLGHT VEEIDHVPLE
301 HEQFHAANYR FWMATLAAAS KTLTTAFGIP ASTDVYETCT LKGIQDGQAM SAVDIMEAVQ
361 IMGMTGHQMG AFFAGYDAVI LPPFAAPPIP LGVLDQNHPG WSARRFYDEL FSRFNATAPF
421 NVTGQPAITV PTGLVEGLPA GVQIATSLAR EDILLNLSAQ LEDATDWPAR RPAVSVANL
SEQDB ID: 3101377EBF
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQQNVNAGL AAQDGLSHVQ GASQPDLSNA TIPQLLHTTV ARGGANDALI FAGARLSYDA
61 FAQAVDDLAC GFLALGLQKG DRLGIWSPNR VEWVLTQFAT ARIGVILVNI NPAYRLSELE
121 YALNKVGCKA LVLAPAFKAS DYVEMIRTLA PELASCDKGG LRTARLPDLR HVIVMGENAG
181 QCGEWAFGEI ARMGGAEHRA RLPDIDKTLN PDDPINIQFT SGTTGQPKGA TLTHRNIVNN
241 ARFVTDRINL SERDRLAIPV PLYHCFGMVM GVLGAVSKGA AMVFPGEAFD PAQTLDTVEA
301 ERCTALYGVP TMFVAMLQEL ATTSRDLSSL RTGIMAGSPC PVDVMKQVND RMHMGEVTIC
361 YGMTETSPVS FQSFVDDSTE KRCETVGRIH PHLEVKIVDD TGNTVPVGVQ GELCTRGYSV
421 MQGYWDDPER TAEAIRDGWM HTGDLAVLDA DGFCTITGRV KDMIIRGGEN IYPREIEEFL
481 FGHPDIKEVQ VFGIPDARMG EEVCAWVVAK PGCEISAEDV RTYCRGQIAH FKVPRHVRIV
541 TELPMTITGK PQKFIMRDRM VEMLGHAGAS D
SEQDB ID: 3101377EBG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTADFIIEN GRVLTMNAAA PRAEAVALRG GAILAVGGRD EIAELAGPDT RRFDAQGNTV
61 MPGMVEAHLH LFLGAAGLRM LHLDTVRGAA ALRERLHPYA AANPDAALLI CKAADYNLFG
121 DGIATTRQLL DDILSDRPFI LIAGDHHTAW ANTAALERAG ILQGRDLPTG NEIVMGPDGT
181 ATGELREQAA IDPVLSLRSS GGRENLGLMG LEPSVELTAA QRDDDLRVIK EGLKYCASFG
241 FTSLHNMDGN LYQLALLREL EDRGELICRT EVPFHLTPEK PLSSLDEASW MHETYRSDRL
301 RSGRIKMFMD GVIDSGTAFL VGDYADRTGW CGEALHSAEA FTAAAVEADR RGLQISVHAI
361 GDAAVRRVLD GYEAARRANG ARDSRHRIEH IELLHPDDAH RLRELGVVAS MQPPHPPGAM
421 DFPLEPWRTK AGQGRWPQAF PVRALLSDGV PLAFSSDWPV SDINPMRGVR AAMTRPRWDD
481 DCPDNRLSLT EALHGYTAGG AYAGFDEHRL GRIAPGMQAD IVVMDRDLEA LASEEIDTAR
541 AALTLCGGEI TWEA
SEQDB ID: 3101377EBH
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNQSHSLKRH LLVSVLIVAG FAALPLVMTQ RYLLGEVILF FLWAMVAMNW NLLMGHAGVF
61 SLAQMLFFAT GAYSVAMGTS YLGVSIWAAL PLAAVVSAIL AFFIGLACLR LTGAYVALLT
121 YAIVGMVHVL IITETECFTM VRNSCQQMFG GAAGFSQFED FGFRKLLRGN WILGNYYVAL
181 LAFAVTILGI VVIIHGRLGL AFRAIRDNVG YASSRGIDRR KYQIAAFAIS AFLTGLAGAI
241 YAGHFRAAGP SLFDFSTLLF VLSMVVVGGV GSTWGPIIGA GTMMLIIEFS KGMGDARDLI
301 LGVALIVFVV VMPKGLAGSV RQFRQMLGRK ASKNEEGSTV
SEQDB ID: 3101377EBJ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVLIQIFFT GVTLGAMYAL ASVGLSLIFG TLGMFNMAHG LFMTLGAYVA YSAANAFQLP
61 LVLGFVAAMA AGAVIGVLTH LLIVRFMLGS PDFGMNVMVA TAGLGIVLQD IVLKIYGGYP
121 YPQVVRVEGI AQLGGVSITL QALTNVAVAL ALILGTAWLL MKTRFGRAIR ATAMNREAAM
181 LMGVKADTVF LQVMALAGML AGVAGLMIST QATLSPQMGG DPLLKAFVIC VVAGLGNVWG
241 AGVCAFGLAL LEAAIGYYFG VRFGFPTMLM LVILLLIWRP QGLFGRERVV RL
SEQDB ID: 3101377EBK
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQLLSCENL VSGYLNRPVL HGVSIEVPQQ GVLALIGPNG HGKTTLLRTL SGFLPLRSGK
61 ITFDGQDAGR MAVNKRVEAG LIHVPQGDQL FTEMTVEDNL LMGAYLASDK VEIAQRLADV
121 YQLFPKLKDR RNQLASGLSG GERRMVGIGR GLMADARLIM LDEPSLGLAP LVIEQIYAAL
181 DQLRARGKAF LVVEENPSRL MHFADRLCLM DAGHVVWQGS AAEARDSGDI LKTYLGGH
SEQDB ID: 3101377EBL
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEDAHGFLE LRGVTKRYGA LAAVDGVDFT VDRGEVIGIG GPNGAGKTTF FDLISGLTRT
61 TEGTIRFRDQ DITGLAPHRL CRLGMARTFQ LNSGFDNMTV FENLLAARAF GRRSAGGWLL
121 TARADKQATQ VLLDEIGLAD IASDPVAGIP ILARKKLMIA TALIGEPDIL LLDEPVGGLT
181 PPEIDELIDL MLGLKSRGMT LVFIEHVMRF LTAVADRAVM MHQGRIIYDG TPGGLANDKT
241 VAEVYLGSAG LGGMA
SEQDB ID: 3101377EBM
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKELQHTQT RRGFLKSAGM ATGSAAMLAG LNSAAQAQSS DPVVIGCPAP LTGIVAADGI
61 EFQRGIQMAA DEINAVGGIL GRPIELVFAD TQSKGVDVVI QSAQRLIDRD NASALIAGYN
121 LENGTALHDV AADAGVIAMH ANTVAVHDEM VKSDPDRYWG TFQYDPPETL YGGGFLKFLK
181 DIEDNGEFSR PNNKIAIITG PGIYSVNIAN AIRDGAGEYG YDVSLFETVA IPVSDWGPTL
241 AKLRADPPAV IVVTHFYPQD QALFMNQFMT DPTNSLVYLQ YGASLAAFRD IAGDNSVGVT
301 YATVLGTLQD EMGDAFAKAY KERYGDLSST ASGCQTYSAL YAYSIAAALA GGPGAPYDDV
361 QNKAVADRLR SLIFRGPVGT MRFHADTQSA WSYPTETNDP SLGMPHIFSQ IFDKAEDGVL
421 IAPAPYKKAG FKMPPWMKG
SEQDB ID: 3101377EBN
Reference:
3101377
Name: histone deacetylase/AcuC/AphA family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFHENTTCSR RTALVASELY YWHDTQNWCG SMVPSLTVQP AEHFENPETK RRLQNLVQAT
61 GLWEHLSHLR PKRAADEVIR MVHPQSHIDH LASVCERGGG DAGELTPAGP ASLEIARLAV
121 GGVIVAMDAV MTGAAENAYV LCRPPGHHAL PDLAMGFCLL ANAALGIRHV QKTYGLTRIA
181 VVDWDVHHGN GTEAVFLDDP GVLTISLHQD NLFPLDSGGI GVKGAGNSNI NVPLPPGSGS
241 GAYREAFEQI VIPALDAFAP ELIVLPCGYD ASAVDPLGVC MLSSEDFRWM TRQVMTLADK
301 HCQGRIVVTH EGGYSPVYVP YCGLAVLEEL SGASDTLPDP YADFIANYGG QALSNDQAAA
361 IKRAKDAHFS S
SEQDB ID: 3101377EBP
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCTARSIDDF ASVVVPFCRD VFAVQSVLAI RFHPSGPPEP LFKWVLENHL EALFDRDYTR
61 FGYLLDPFYK LAVETENWVA CPLREIAPDR FETSEYFSNY FGPMGLVDDM GFVARVDDDT
121 SVNMSIGRHA GKRRFRASEI ARFRSLSTVL VPSLLSVLGK PTKRNPGVPA TLEHRFLTIS
181 QNGENEISDR EAEVATLIVQ GHSSRAIGYK LGISSNTVKV HRRNLYKKLN ISSQSELFGL
241 LTQNA
SEQDB ID: 3101377EBQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGDEFTRMV LGKDATNAER VISNGVIAPG AFNPDHYHK
SEQDB ID: 3101377EBR
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDFAPSAKAK EFHERLAAFM DAHVYPAEAV YHEQHGAAPS RWHVPPIIEE LKARARSAGL
61 WNLFLPDAEF GAGLSVLDYA PLAELTGRSH IAPEVFNCNA PDSGNMETLF LYGTEEQKSR
121 WLRPLLDGEI RSAFLMTEPD VASSDATNIE CNIRREGDEY VINGRKWWSS GAGDPRCKIF
181 IVMGKTDPEA SVHSQQSMVL VPADTPGVTV ERHLPVFGYD DAPHGHMEVS LKDVRVPVSN
241 VLLGEGRGFE IAQGRLGPGR IHHCMRSIGA AERALELMTE RLLTRNAFGK AIGMHSVWEE
301 RVANARLEIE MTRLICLKAA WMMGAVGNKA AKDEIAMIKI AAPNMAARVI DDAIQAFGGA
361 GVSEDTPLAW MYAAQRALRL ADGPDEVHRR AVARSEFKRA AARLGVDIRT VAS
SEQDB ID: 3101377EBT
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPPRSLLHA LKPFLEAGAD KEALVFGAHR ISFGDMAGHA AALAEVLRSK GVQKGDRVAA
61 LFPPRPEAIL SLLACWLIGA TWMGINPRYQ RREQAQILAD AGVKVLMSMT RIGKRDLEDD
121 LASHETDLGF SVLRFAPAFA PAALPEKLPY DEVLRRWREA TETLEPDSPS VVIYTSGSTG
181 KPKGALITHA GLAFRSHTLH IDRFNLPAPT QLIDLPVNHI GALASGIGVA MASGGKMILS
241 EQFDPGVTLR TAFAEKLAII SGVPAMLARL VEHPDFATSD LSSVKAISWG AGPINEAVLR
301 KLLNATDALF SQQYGMTESN GPIVFTPPTR DVEVLLNTTG KPDPRLELRI ADESGQPLPD
361 GEEGEVQIRH PHPFAGYLGN AEASAAAFTA DGFLHTGDLA MVREDGYLVF CGRSKEMYKS
421 GGFNVYPREI EIALEAHPAI RAAAVLGVDD EQWGQVGHAF VELASPLTSD DITGWCKARL
481 ADFKVPKRVS VIDAMPRTPV DKVDRMQLAE LAARG
SEQDB ID: 3101377EBU
Reference:
3101377
Name: carbamoyl phosphate synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRLLIANRG EIACRIIRAA RSLGIETVAV YSEADAGALH VEMADQAVSL GPPPAAQSYL
61 RQDALIEAAR AKGAGAVHPG YGFLSESASF ARAVVNSGLT WIGPAPETIA DMGDKGRARA
121 LAIKAGVPVL PGSDSFAEGA LDGVEEAGAT VGFPLLVKAT AGGGGIGMQR VDDPAKLRKI
181 AERTQSAAAR SFGDGSVFLE RFIARARHIE IQVFGFGDGR AVHLHERDCS LQRRFQKVVE
241 ESPAPGLDRA IVARMGEVAC ALASAVNYSG AGTVEFVMDA DTGEFFFLEM NTRIQVEHPV
301 SEMVTGTDLV AAQLRLAAGD DIHDDLADRA PSGHAVECRL YAENPAKKFL PSPGTLERFS
361 LPDGMDGVRV DTGVREGDTI TPFYDPMIAK IIAWGESRDE ALERINAALR ATHVEGLATN
421 RDFLIAITSN PTFRSGEVWT GFIDTHLDAL LSAQSG
SEQDB ID: 3101377EBV
Reference:
3101377
Name: propionyl-CoA carboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWQKEVDEI NRRREIAKEL GGAEAVKRQH DAGRLTVRER IDMLVDEGSF RELGALTGKA
61 TYDKDHNLVD VTPANAVIGR GTIDGRKVSI DGDDWTIRGG SSEATVSEKW IYAENYAEAM
121 RMPLIRLVES AGGSVKILDQ NAATKLPAYP TWNLARMMGT IPIVGLALGP CAGLGAIKAA
181 TAHYSVMVKG TSQVFAGGPP VVERGMGVKV DKEDLGGSKI HTRESGVMGN EARSEAEAFE
241 MARRFLSYLP SSVYEMPPVI ESDDPKERRE EELIEIIPRD KRKVYKSRKI LDMVFDRGSV
301 FELTKGYGRS VVTCFARLGG RPVGVITTDP MQYGGGMTKA SAAKMEAFID LCDTFHLPIV
361 HMVDQPGTIV GPEAERSGAV KGSVRVCMAI EQSQVPWCAI ITRRCYGLAG STFGRVQGIN
421 LHYAWPSGRW GSIPVDGGAE AAFKKELDAL DPEARAARLA EIEGHFFHME SPFLTAEKFR
481 IPDIIDPRDT RALLNDWLDD SWKLIADQLG PKGRTFRM
SEQDB ID: 3101377EBW
Reference:
3101377
Name: biotin/lipoate-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDETIESEI AGTVWKIEVK VGDTVEEEDV LMILESMKME IPAEATCDGT VAEILVSEGD
61 GITEGQALVR ITPTQ
SEQDB ID: 3101377EBX
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYQQTTALHR AMLASLRPSL AGGSEALSIS EQIAMQLADE IVNEKYSPND RLQEIGISER
61 YKVSRGPVRE ALRILENAGL VTIAPRRGAI VTQLSAEEVA DVFDIRAVLS GLGARRLAET
121 RSQDDIKMLE RQLSVLKKLA KKSGSTAAAD YVHAVVEFGL SISEASGNTR LNSMVTLLFH
181 QTLRYSRLGL SSPERRAHSC ENWAELVDHI VHGRGEDAEK TARRLVDQSK IHAIRLLKDE
241 ANAATDQIR
SEQDB ID: 3101377EBY
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFIDAHHHL WDVELNGANY PWYTEDHGDR GWGDTAAIMR NYKPADLLAD AQDADLTIVK
61 SVHVQANFDF SNPVAETRWL EQVAREEGSG NLPNAIVGYA DLSASDVGDV LEAHAESARF
121 RGVRQVLNRH DDPKLNRAPQ DYLADPNWAA GLRRLSDMGL SFDAQIYHHQ AAALADIAKG
181 LSDLNIVIDH ALMPAERDEA NLEGWRKAVT RLAELPNVSM KISGFGMVDN AWTTDSIRPF
241 AMHCIEAFGP GRIMFGSNFP VDKLMSDYGR LWRAYGEIIS DFSEEEREQM LTGTAARFYR
301 I
SEQDB ID: 3101377EC
Reference:
3101377
Name: poly(3-hydroxyalkanoate) polymerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQARLKAVN TPRELGAKTG SGGKPLTPPI SLDSPKQKTG SKPYPDTGLP EFLDRALKAR
61 MARVTKGLSP AALAGAYLDW IVHLATSPGK QIELSENAYR KWLRLSRHAA TCSVNSNDTA
121 PCIEPLPQDR RFRSDAWQKW PYNLIYQSFL LNQQWWYNAT TGVRGVTRQH ENVMEFATRQ
181 ILDMFSPSNY LLTNPEVQER TLKEGGLNLL RGFQNWLDDL DRLQSGKPPA GAKAFRPGQE
241 VAVTPGKVVY RNHLIELIQY TPTTDTVRPE PILIVPAWIM KYYILDLSPE NSMVKFLVDQ
301 GYTVFMISWR NPSAEDRDLG LDDYRKMGVV DAIGAVQGIV PDQKIHGVGY CLGGTLLSIS
361 AATMGRDGGD PFASLSYLAS QIDFTEPGEL QLFINESQLT FLEDMMWDHG YLDTTQMSGA
421 FQMIGSADLV WSRSLHSYLM GDEPAMFDLL AWNADGTRMP YRMHSEYLRS LYLNNELTEG
481 AFVVEGRPIS VTDIRVPVFS VGTVKDHVAP WPSVYKMHLY LDTDLTFVLT SGGHNAGIVS
541 EPGHRNRSYQ IATARHGDRY VDPETWAAQT PKKDGSWWLE WMSWLGERSG KPVPPPAMGN
601 ALTDAPGTYV HQK
SEQDB ID: 3101377ECA
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFGKMKATL LGGALAALTA GAAIAEAEIK LVFGVAGQPT WGFGKLLTEV IEPNLEKYSD
61 GRIDLEVHQR GALCSEAACM EQLGLGQIDM TTVSAGNMGA FGKTFDILNL PYLFKGQQEA
121 ETIMRGWLSD ELAKQAAGEM GIHVLATVSS GGFRNVVNTE REVRVPSDLK GLKIRVTKSP
181 TEFNLVQGWG AVPIPYAWAS LYEGLQSGVV QGMYLQDVFV SAAKFYEVTK FVTRVESSYS
241 GRPVMMSKQR YDALPDWAKE AVDKVAADIA REALNYDLAW QKDAIAAMQD KVSVYVPTEA
301 ELAEWSKGAV EAWVAVKGTY DPALARRILE EQGLSELIGL LEEAGAL
SEQDB ID: 3101377ECB
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVLKRISDG ADFIILRILP VICGAMLVLM VAFIAYTVIM RTVFLNPPFW GDTLAMFANV
61 WMVFLGLIIA VRERSNIAME ALYQLIPAHY GRWFRKLWAV AFAGFGLLLL TKGYEAASRI
121 LGSYWELGNL PKSYPLMILP ITGVGILVAS ILSLFRPLDE APHMDDQEFP
SEQDB ID: 3101377ECC
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKREGRGQM EIVLLVVCFV VLVLLGAPVA LAMILMPTTY ILLTDAAPLL TVPHQMYEGI
61 AHFPLVAVPF FMLTGELMNG SSVTQRIMRL SRVIVGRMRG GLAQVNIVAS MFFAGMNGSA
121 VADTATIGTI MIPDMKRKGY TPAYAAAITA IGSTIGGIIP PSIAMIVLAS SVNLSVGALF
181 AGGILPGILI GLLLMLTAWI IAKAKDHERG DEPFTFRAFL SAAWGASLAL CVPLILVVGI
241 FGGWFSSVEA GAITALVALI LGTVVYRDLD LASFLGALNR TVRMSASVFV IIAAAGPFTW
301 LLARLGALEM LQNWLLGFAE TPFFFALMLL GLILLAGMIM DAAANIIVLG PLLVAACETA
361 GYEPVQAALV VVVGFLLGTV TPPVGVCYFT ATAIAGCRLE QSAAALLPFL AVEILVLLLM
421 LFLAPLTLFL PALLGFL
SEQDB ID: 3101377ECD
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMKALMSKTP GGPDSLSLEN IAEPVPGKGE VRIAVKAVGL NFPDLLIIRD LYQFKPPRPF
61 APGSELSGIV ESTGEGVTQL KAGDRVLAFS GWGGLAEQVV VPESRISRIP DQMPFEDAAA
121 FMMTYGTSYH ALKDRAGLGL GQTLLVLGAS GGVGLAAVEL GKILGARVLA AASSEDKLQT
181 ALDAGADDGL VYPLGEINKK ELSTRFKELC GKSGADVIYD PVGGDYSEPA LRAIAWEGQF
241 LVVGFPAGIA KLPMNLPLLK ACSVTGVFWG AAVERNPAQH AEATAELFDF YLKGKVKPKV
301 EVMQGLENAA AALEKLSQRK VQGKLVVSLG
SEQDB ID: 3101377ECE
Reference:
3101377
Name: phosphotransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMVKPLHEFD RSELGSYLAA HVEGFDALDK IERFGGGQSN PTYKITSGAR TFVLRAKPPG
61 KLLASAHQVD REYRVLRALS DTPVPVPQVY HLSGETSPLG TMFYVMEMLD GQIFWDPALP
121 ELARDRRGAV YTQLSRTLAA LHDVAPTQMG LRDFGAPGDY FARQLARWTK QYRASTDAEN
181 PLIEQLIEWL AAHQPEDDGQ VSIVHGDFRI DNLVFSKDAS RVIGILDWEL STLGHPIADL
241 AYFCMCLRLP QSGLVKGLGS ANRDDFGLPT EESIVAQYCV QRGIEPPAFW TFALAFSLFR
301 LIAIATGVLK RAQQGNASNP RGEAETRRII ETLTKLAGDV IAG
SEQDB ID: 3101377ECF
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQVAEAIKDW VVEQGLQAGD RLPGEAELIE RFGMAKGTIR EAMRILEAQG LIKTRTGPGG
61 GSFVHEVSQQ RAKALLGNYF YFKDLTIGDI YQLRLTLEPE LAASLAGKLS QSTLDLLEKT
121 TAEYVEPAAT LDEERDQHVA SLRFHAILAN QSQNPLLGFV IDFMVNLLTD LTVYRRLYSP
181 PNIELWKQGR DHQQQLIAAL RNGEADKARA IMTDHMKTAW KLMRQQEVEM ESRFISE
SEQDB ID: 3101377ECG
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPALKVTNLA KTFPLKKPIF GSAPPGVRAV RPMSFEVATG ETLGVVGESG CGKSTLARML
61 VGLLEPSEGS IEIEGRALDN ADPAEFGKLI QYVFQDPQSS LNPRKTIRQV MEAPLRRLYG
121 MPKPERDRRI SEIFASVNLR EEFLDRYPHE FSGGQAQRIG IARALAANPR IIILDEPVSA
181 LDVSVQAQVL NLLADLKAQF GLTYLFITHD LAVVEAVSDR IVVLYFGAVV EIGRAENIFA
241 KPRHPYTRLL ADSAPVVGKP LTAPEQKGSE LPDPLNPPPG CAFAGRCPRA TEICRADEPK
301 LTEMGEDQLA ACHHPLEG
SEQDB ID: 3101377ECH
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLFLKLLFR NRLAAMGAVV LGAILLLVLL TPFLPLQDPD VTATADRFKR PFSEGHLLGT
61 DHLGRDLLSR LLHGTRLSLA VGIAAALVAA TIGSTIGIVA GYFGGRVDNI IMRIVDMLMA
121 FPYILLALAI VAALGPGLMN ALIAVAAVNV PFFARNIRGI TVGLAGREFI DAARLAGMGH
181 ARIILTELLP NVLPVIVIAM STTVGWMILE TAGLSFLGLG SQPPQADLGS MLGEARSAMI
241 SHPHTSIVPG IMIFLIVMSI NLLGDGVRDA LDPRLRSGAL SRPRATTLVE RQGDIPAATD
301 DLLAIQELET QFHVGDRIYR AVGGVSLAVK PGECLGVIGE SGSGKSVTAL SVMGLVASPP
361 GVITGGAVRF QGEDLIGAPY ETLRQRRGDR VAYIFQDPLS TLHPLYRIGQ QLAEAIQSHH
421 KVSNAEARAR AIQLLKDVRI PNAESRVDNY PHEMSGGMRQ RVGIAMALAN EPDVIIADEP
481 TTALDVTVQA QILSLLDDLR RDRGLAIIFI THDFGVVAQL CDRVAVMYAG RIVEQGPTQA
541 VLEAPAHPYT KRLIACVPEL GGGRRELAAI PGLPPVVDNL PEGCAFAPRC DKAQESCRAG
601 DVALKGTAPR AVRCLYPEVA V
SEQDB ID: 3101377ECJ
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSYIIKRLI SAIPVLLGIT IIVFLIMSLI PGDPATAILG SYATPENVEK LNRDLGLDKP
61 MVQRYVIWLG NMLTGDFGRS FSLNRPVLDE ILERFNATMI LAGTAFVLCA LLGILAGVVS
121 AARQYGFADK AITFVVLIGI SVPSFFLGMM MILLFAVNLR WLPVSGMYAI YGGGDLPDLL
181 KHLIMPALAL AAVATGVIAR LARSAMLEVL RQDYIRTARA KGVPERRVIM GHALRAAMVS
241 IIPVLGIQAG FVLSGAVYIE IVFQWPGVGR MLVDAILKRD LLLVQGGVVF VAACYVLFNI
301 AVDVAQSLLD PRIKT
SEQDB ID: 3101377ECK
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFIMIIINA EHQQGEHEMT PLSWSRRGLM AAVGAALVAG GLSGSASAQT PPGVLIVGQI
61 AEPKSLDPAA VTAVNDFRIL VNVYEGLTRY KSGTLEVEPA LATGWDISED GTEYTFTLRE
121 GVSFHDGTPF NAEAVKFNFD RMLDENHPFH DTGPFPLSFF FGAVEKTEAV DDMTVKFTLN
181 APYAPFLSNL AYPTGLMVSP TAVEAHGKEF GRNPSGTGPF KFAEWRSNEA VVVERNDTYW
241 GEVAGTQAVV FRPITDANTR VAEMLAGGID MMVEVPPTSL GQFQGDGFSV AEQAGPHVWF
301 LILNAKEGPF ADKRVRQAAN YAINKEAIVN DVLEGTATVA AGPTPPAFAW AYNEALDPYP
361 YDPEKAKALI AEAGAEGAEL TFFVTEGGSG MLDPVPMGTA IQADLQAVGL NVKIETYEWN
421 TFLGEVNPGL EGKADMAEMA WMTNDPDTLP YLALRSEAWP DKGGFNSGYY ANPKVDELLE
481 AARTATDQDE RARLYREMQT IVQEDAPWVF VANWKQNAVT SDRVENFGLE PSFLLHLQGV
541 VKN
SEQDB ID: 3101377ECL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFSILAHDP ETGAIGGAAA TGSLCVGGWV LRGDLNAGMS ASQGAAPSTF WGEEVLQHLR
61 DGSHPEDAVN HVTSQDSGRA YRQLAAMDLL GNAAAFTGSE NQDIKGSVTF ASGIASGNML
121 GDNSVLGAMT EAFVASDLTF ERRLLAALIA AEGAGSDFRG LLSAAMLVLH PDRPPVTLRI
181 DYHPDNPIGA LEQLYQKATT GDYADWARQV PVLSDKERIL D
SEQDB ID: 3101377ECM
Reference:
3101377
Name: carbamoyl-AA amidohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDWGARAQA LLKDLAACSE AGPGVTRLPF TPEHRAACDL LWTHMEATGL TVTLDDAGTL
61 VGRYEGPPDS KTLLMGSHQD SVREGGAYDG IMGVVLPLLA LAKLRAEAVH LPFSVEVLAF
121 ADEEGVRFPT ALVGSRALAG TFDPAVLSMQ DARGVTLHDA MTSFGLNPDR IGALRRDPAD
181 VIGFVETHIE QGPVLEQAAQ AIGVVTAICG IERHQIVVTG ETGHAGTLPM SGRRDALVAA
241 AAIVTEVDRL GQTIPDLRAT VGALSVEPNV VNAVPRRVTL TAEFRSPDDA TRRNTGAMLH
301 RYAQELAAQK QLKIKAERTY SQVAQPSDGA LSAQLLQAAR QAEEHGPLLP SGATHDASAM
361 ADLCPIAMLF VRCRDGVSHK PEEFASADDM GSAIAALAAF LRTLNPQTD
SEQDB ID: 3101377ECN
Reference:
3101377
Name: gluconolactonase, Class: EC3.1.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gnl
Sequence:
1 MTEPCYVMVD QRFDEFVDTA RAPEQIVHGF AWTEGPVWLD GAPFFNDIAN KRMMRWTKQA
61 CAEVALDNSE FANGNTLDGA GQVVSGEHAG RRVIRRPDPT DPSAVEVIAE RSEGKRLNSP
121 NEVVVRSDGS VWFTNPPYGI NSDIEGYPAE SEIGGCFVFC PDPDGTLHAV ATEFDKPNEL
181 AFSPDECRLF VADSGAIRGA IFPGIDDDLP HHVRVFDVDG VTLSNGRVFA VVAPGAPDGF
241 RVDHEGYVWT SALDGIHCLS PEGALIGKIW LPRQTSIICF GGPPGQTMFI TSSDKVYRVE
301 STRRDAAHAL RDRERNAE
SEQDB ID: 3101377ECP
Reference:
3101377
Name: 2-hydroxy-3-oxopropionate reductase, Class: EC1.1.1.60
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: garR
Sequence:
1 MSMNIAVFGL GSMGYGMAQS CLRAGIGVHG FDVVAEQVAR FVKEGGSAAA FAEVARSLDA
61 VVVVVLNAAQ VEQVLFGEDG VVTQMREGAV VLACATVPPE FAKEMERRCA EKDVLYLDAP
121 ISGGSLKAAQ GRLGIMASGS AAAFAAAEPV LEATAETVFR LGDAAGAGSA MKAVNQLLAG
181 VHIAAMAEAL TFGMTQGVAP DTFLDVISKC AGTSWMLENR APHVIAGDYA PHSQVNIWPK
241 DLGIVLDAAK AAGFEAPITE TALARYRQAV DMGLGGEDDA AVAKVYAAQA KLTLPGAQS
SEQDB ID: 3101377ECQ
Reference:
3101377
Name: ygbK domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLGCIGDDF TGSSDLANTL AKQGMRVVQY SGIPSRDADA GVEAVVVSLK SRSIDPAEAV
61 AQSLKALDWL RAQGCSQFFF KYCSTFDSTP QGNIGPVADA LAEALNADRV IICPAFPGTG
121 RSVYQGHLFV NDRLLNESGM EHHPLTPMTD ADLRRWMASQ SKFSIGHVSA QAVFAGPRAI
181 TEALDAEHAA GKRHIVVDAI RDADLMAIGA AATDLKLVTG GSGVALGLPR NFGCTPGVPE
241 WRGQHGPVLA LSGSCSMATR AQVARHAARY PVRDLRAEDV IENRVAPADV LDWALKADGV
301 PLVYSSADPA QVKAVQDRFG RERAAAAIEH FFAELARRAV DAGVTRIITA GGETSGAVVE
361 ALDLEELIIG PEIDPGVPAL RAGPDLVVAL KSGNFGAEDF FEKAAGVLGA
SEQDB ID: 3101377ECR
Reference:
3101377
Name: L-fuculose phosphate aldolase, Class: EC4.1.2.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fucA
Sequence:
1 MSETRLREDL CRLAASLFDR GLTHGATGNI SARTEDGGLL VSPTGTSFGR LDPARLSRFD
61 AGGRLIEGDP PTKEMPLHSA FYDTRSTAGA VVHLHSCHSV ALSLLPDIDE DSFLPPLTPY
121 AIMQLGRVKL LPFFVPGDPA MGDAVRGLAG KRSAVMLANH GPVVAGKSVE AACNAIEELE
181 ATARLALMMR GLPARALSSE QISRVVSKFD VEWDE
SEQDB ID: 3101377ECT
Reference:
3101377
Name: hydroxypyruvate isomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAFSANLGF LWVDRPLPDA IRAAKAAGFD AVECHWPYET RAEDVKAALD ETGLPMLGLN
61 TIRGNPGENG LAALPGREDE AHAAIDQAIR YADAVGAGAV HVMAGFAAGP QARAMFERNL
121 DYATSRTDRT ILIEPLNRHD APGYFLQTTG QAQEIIKSVS APNLKLMFDC YHVGRTEGDI
181 LTRLTELLPL IGHIQFASVP DRGAPDHGEL NYAEIFSHIS KLGWTTPLGA EFKPRETDEI
241 TRWLTSFRSG G
SEQDB ID: 3101377ECU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPLPCCDA ARRNLFSLQL QDLDKAERPM SGRF
SEQDB ID: 3101377ECV
Reference:
3101377
Name: GTPase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRDYSNFLP QRARDGGSQA SLSPLQALGW QPFFAQQVSV DDMIATPPVR VVEVHRSGLH
61 VLGDDIDTTL PPRADVTVGD WLMLDPSHPR SSRALERTSL IKRRAPGTDR QEQLIAANID
121 TVFIVTSCNQ DFKVARLERY AALAFEARIT PVIVVTKTDL VTDAQSYIDA ARAVSEMIEV
181 VALDARGSAP KADLAAWCKP GKTVAFLGSS GVGKSTLANA LLDSQFIETQ TIREDDAKGR
241 HTTTRRELHA MPNGCLILDT PGMRELQLTD AADGINDLFA DIQELATQCR FNDCQHETEP
301 GCAVLKAVDE GVLDARRLGR WRKLMAEDAF NSASLAERRS RDKAFGKMVR GVKKIKDVRR
SEQDB ID: 3101377ECW
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGGETMTQS KAGQIVWHDL FTSDRARSMA FYQHVASWTY QIERATDFAW GGGEKDFVLA
61 LSGDEAGAGF AETPSGQQNG WIAYIEVPDV DAAVSRVVTL GGKIVREPFE VPGVGRNALV
121 RDPLGAIVGI SLSRHSFPVP RRQFGPEMYV SNGNDFPQTF YADLFGWQVS PERVKDRVAL
181 LGPGGDLVAT HHAATLPAGS NSVWVPCIKV ASVSDAFRAA ETKGARPASL EVNETVQVHD
241 PILCDPDGAP FVLGVTQTTT F
SEQDB ID: 3101377ECX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMMTDPVAA PSNPGWLHRS EAWLDSKGKG AWIAAMVLGF IFFWPLGLAL LAYMIWSKRM
61 FSKSCTRRKA WSHHGMRAMS TTGNSAFDAY KADTLARLER EQADFEAFLH RLREAKDKAE
121 FDDFMDERVR KARDDERSSK GRDDDSDDA
SEQDB ID: 3101377ECY
Reference:
3101377
Name: RDD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHLPHPDHQ PEFYQSIPAK RFFAWVFDTC VILMLSLVVV LLTAFVGAFV WPLLYLVVGF
61 VYRVATIAGG SATWGMRFVG IELRDAYGAH LNGGQALAHT AGYTVSMALP LLQVISILMM
121 LTGSRAQGLT DAVLGTVALN RRAYA
SEQDB ID: 3101377ED
Reference:
3101377
Name: enoyl-acyl carrier protein reductase, Class: EC1.3.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabI-1
Sequence:
1 MGLLDGKRGL VVGIANERSI ASGCAQAFHR EGAELAVTYL NEKARPFVQP VAEALDAEIF
61 MPLDVTADAE MDALFEAIAS SWGRLDFILH SVAYCPKEDL HGNVLDCSRE GFSAAMDISV
121 HSFMRLARRA RPLMQNGGCL LTVSYYGAEK VVDHYNVMGP VKAALESTVK YMAAELGPEG
181 IRVNALSPGP LMTRAASGIA HFDALIDEAR ARAPQQRLVT IEDVGNMAAG LVSDAARNVT
241 GNISYVDAGY HVMS
SEQDB ID: 3101377EDA
Reference:
3101377
Name: Arg-tRNA-protein transferase, Class: EC2.3.2.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ate
Sequence:
1 MGCYHPLSGT DGTLMRHTLP IAPQFYVTAP QPCPYLAGRM ERKLFTALQG EGAERLNNAL
61 SQQGFRRSQN VLYRPSCADC AACLSARIDV SAFRASRSQK RAMRRNAHLT RRATSPWATD
121 EQYELFRRYL DSRHADGGMA DMDVFEFAAM IEETPIRSRV IEYAHRDTRA LIGVSLTDVL
181 DDGLSMVYSF YDPDLHRDSL GTHMILDHIA IAREAGLPYV YLGYWVPGSP KMGYKSRFSG
241 LEIYLGGRWQ AMTDPEAHDA IRHPLSTDPI AEQVANIQLP DRWPTGD
SEQDB ID: 3101377EDB
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLFALSLVV PDYDAAITFY CGALGFHLDQ DEDQGNGKRW VRVSPPGGGA SLILARAVNP
61 RQTAAIGNQT GGRVGFFLET DDFARDHTAM LAKGVQFEEA PRHEPYGIVA VWRDPFANRW
121 DLIQFT
SEQDB ID: 3101377EDC
Reference:
3101377
Name: TRAP transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLFGLDGVEV GLIIVFLCLF GGILSGFPVA FAIGGAGIIS FGIIAALDSA GLLIHQAIDT
61 SSQAYAELIG AGVKPDAISV FRYPELPRIA EHVFKGGWET AMDRNVSFIV NRMNERVLAG
121 QSIETLLAVL MFVLMGITLE RSKIANDLLT TMARVFGPLP GGLAVSIVVV GAFLAASTGI
181 VGATVVTMGL LALPTMLRNN YSPELATGVI AASGTLGQII PPSIVIVLLG TLAGDLYSTA
241 QETRAIEAGC TDALTFLGEP AVVSVGTLFQ AALLPGILLA LLYALYAFGY ALLNPDKAPA
301 VAMGGGSGEP ITRGEGFTWL LGAPVALIAG VLLLGSLGVV GSQDVTVSTF SDSSKSASLR
361 TNVGPECKAS MIALHGQEAW DAALAEQESI DAAGGVQESH RLSAEEIAEA RATKIADAAP
421 IGTGVAVIAV LLGLTLVVGR GIAPSRDPKP LLVGGLGLVL MLLADILFIG PLTSPGVTVL
481 ILLVPLALAL YGCKAAAIRC TGNDLIRVVF PPLVLIIAVL GSILGGITNP TPAAALGAGG
541 AIMLAAYRKL KDEGRTGNVI IWSTFAIIIC LLIGVNFDLR INQDGVSVET WIAFIFAYAT
601 YIYALGGLLF GCWVLFAGGV LTPIVRETAK VTSMVFTILI GSQLLNLVVI SFGGEHYIQQ
661 FLKSFDNEFT VFLIVMLVLF ILGFVLDFLE IIYIVIPIVG PVIYGGSFDP KWVTIMVAVN
721 LQTSFLTPPF GFALFYLRGV APKEVTTGHI YRGIVPFVII QVVGIAILWS FPSIVTIVPA
781 LIPN
SEQDB ID: 3101377EDD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYFRPFMWGM VRLLEGFANT TGRFFAWAGL LMVLQQIIIV FMQRVFARPD LSFGFGIPVT
61 LDVSWWSEEL KLYNAMVVCL CATYTFVQGG HVRVDLIYSG LSHRGKRVVD MAGSLLFMMP
121 MAVVTWLYGW YFLWRHLIVP NPSASDQLDR LLMKSRALRW NVETIGFSPN GFNGYFLFKI
181 LLVTFAAMVF IHAVAFFYRS WLEFVEGEGS AGKFLDKDSL GEGEEAYEGT H
SEQDB ID: 3101377EDE
Reference:
3101377
Name: bacterial extracellular solute-binding protein, Isotype: family 7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRRSFLKTS AMGGAAAAAT TALAAPAYAQ GKRTLTMVTT WGRGLAGVHD SAQRVADNIT
61 AMSDGNLTVD LKAAGELVGA FEVFDAVSSG QADMYHGADY YFVGQHPGYA FFTAVPFGMT
121 AQELVNWYYH DGGHELHDEL GQIFGLKSFL AGNTGAQAGG WFSKEINGPE DFNGLKFRMP
181 GLGGKALGKL GASVQNIPGS EVYQALSSGA IDGTEWIGPW ADEKAGFQEI TKTYYTAGFH
241 EPGAGLSVAT NREVFESLSP AHQKIIEVAA GECHQWNLAQ FLSNNGSALQ RLQAGGVKVL
301 EFPDSVWDAF GKASQDVMAE NMGDELFKKI HDSAMASMKS SSAWLNMSSG VYTAQRDRVL
361 G
SEQDB ID: 3101377EDF
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRSVNTYYY VAARKKLAND LEIHCFSGTG RPQKRGSAGQ DLIACFDFAG GFAYRFAMHR
61 LRSLIRPNYA QKISLLATLP LVLAVAAIAA LVAYQARTLA EREIQALERQ LLQAKKAELR
121 NYVTQARNGF AHIYGPAAPD DAEAKTRVAQ MLAAMIYGQD GFFFVYDYEG KNLVSPRQTE
181 FINRNWEGLT DSKGVPVVDE FIRLARQGAG WHSFMWEKPS TGEEAQMVAY VVGLQDWRWA
241 VGTGVFIDDV LASVAAARAE TQARVRRTFL YIGAIALAAL LIVFGSGMVI NIRERRLADA
301 KLKELTQRVF DAQEEERGRV ARELHDGISQ ILVGVRYALD NARRRLARGD HEGAEPPLDK
361 GIDNLGSAIS EVRRISRDLR PGVLDDLGLG PALKSLTDDF RERTGIATDF TTVVFRNRLD
421 QNSKIALYRI AQEALTNIER HSGATHVSID LRGHKKGATM RISDNGRGIR STPGRPGPGL
481 GLRNMQERIE QLDGNLRILS SRGAQSGTVI EVSLPLSHLL PPQEEPASKR KALP
SEQDB ID: 3101377EDG
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDTPVRVLI VDDHPMVAEG IQAILESYDD IQVIGTVGDG REAVGRSLAL LPDVILMDLN
61 MPGLGGLGAT EIIREQMPDT RILILSMHDS PEYISTALSH GAMGYVLKDV PTEEIKQAID
121 AVMRGERYLC TGAKGSLEPK EGEEAREALT GREQTILLQL AQGKSNKEVA IALDISVRTV
181 ETHRKNIKRK LGISSTAGLT RYALEHGVLQ GTGGGL
SEQDB ID: 3101377EDH
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPRKIEIVT AAVTCFLERG YHQTGIRDIA RQAGVSLGNL YNHFAGKEAV LAFIAELEGR
61 ELAAFVDMLS DPEEPYAALE RFIWAYAAYA ARPENALLGL ELMAEALRNP TISQVFDGNR
121 HQLVAALMGC LERGVSTGRF RHLDDTRALA LMILDTLEGQ GLRQLDRKTP DPDAVRTLCA
181 VLTTGLLARD QSPPPVPCNT PCSSA
SEQDB ID: 3101377EDJ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRSRAVDPN RIRIMTAHSS RLAGLDLARY LAFVGMVIVN FKIAMGAEGG AGLLAQLTGA
61 LEGRAAATFV VLAGIGLGLS HQQHAAQTTA STVRRALVLL ALGLLNMTVF EADILHYYAF
121 YFLFGALLLP LGSASLAALV LGLNALFVGL CFTLDYDAGW DWQTYTYTGF WTPTGFLRNL
181 MFNGWHPVVP WLGFLLFGIL LSRMPLAERR TQRGLIAGGF VALALAEALS ARLAVALATL
241 NPGLALLAGT EPVPPGPLYS MAGIGAACIV VGACLIGAEL APGKALLRIV GPAGRQTLTL
301 YLAHVLVGMG VLEAMDLLGG QSVAGATAAA LLFCAAATVY ALLWSRAFGR GPVEALLRRI
361 AG
SEQDB ID: 3101377EDK
Reference:
3101377
Name: acetolactate synthase, Subunit: large, Class: EC2.2.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvB
Sequence:
1 MTREMTGAKM VVQALKDQGV DTVFGYPGGA VLPIYDEIFL QNDIRHILVR HEQGAVHAAE
61 GYARSTGKPG VVLVTSGPGA TNAVTGLTDA LLDSIPLVVL TGQVPTFMIG SDAFQEADTV
121 GITRPCTKHN WLVKETDKLA KTIHEGFHVA TSGRPGPVLI DIPKDVQFAT GQYQGPKGLT
181 SHYNPPVKGD MEEITELVAA IEKAKRPVFY TGGGVINSGP AASQLLRELV DATGFPITST
241 LMGLGAYPAS GKNWLGMLGM HGLYEANMAM HGCDLMINIG ARFDDRITGR IDAFSPKSKK
301 AHIDIDPSSI NKVIRVDIPI VGDVGHVLED ILKVWKARGR KTNAEAVQKW QAQITEWRKV
361 SCLTYKPSEK TIKPQYALER LEALTKGRDR YVCTEVGQHQ MWAAQYLGFE DPNRWMTSGG
421 LGTMGYGFPA SIGVQMAHPD ALVINVAGEA SWLMNMQEMG TAVQYRLPVK QFILNNERLG
481 MVRQWQELLH GERYSQSWSE ALPDFVKLAE AFGAKGILCK DPADLDDAIM EMLNYDGPVI
541 FDCLVEKHEN CFPMIPSGKA HNEMLLGDAE TQGVIQAGGA VLV
SEQDB ID: 3101377EDL
Reference:
3101377
Name: acetolactate synthase, Subunit: small, Class: EC4.1.3.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvN
Sequence:
1 MSALHIKKGS SSHSAYNLRP TFSDVAERHT IALLVENEPG VLARVIGLFS GRGYNIESLT
61 VAEVDHTGHL SRITIVTTGT PQVIEQIKAQ LGRIVSVRDV HDLTVEGRSV ERELAMLKVV
121 GSGDKRVEAL RLADIFRANV VDSTLSSFVF EITGAPEKID AFADLMRPLG LAEIARTGVA
181 ALLRGD
SEQDB ID: 3101377EDM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRDMFGVVL WSDSDDQKAV IWCEDHGDLA FYRRTDAQAP VSLDVGDWVQ FDLVTERKQR
61 LAFNPRLIDQ GSYRGLPDLL REAETEGTGG AAPEGPVAKV IPFSGPAGRK RDRLPNGEAC
121 HA
SEQDB ID: 3101377EDN
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKTTRTPAE LRNMFGENLR RLSRRYPSIS ELSRQLGINR TQFNRYLSGE SFPRPDVLDR
61 ICNFFDVDAR ILLDPVDAIP ASDQILSGPA LAEFFGPDVT RLDEDDFPSG FYRFTRRSFV
121 SERKFVLGLV YVFRENNATY IRGYEALEAM RQQDLPDDPR TREFRGYVTR EDDGVTLLIS
181 RRNAMTFSFN YLSRVASFEN NFWVGYVSRS VREPVSGHRI TRMVYEHLGR DRSAIWKTAR
241 QAGFIDAEDL LPFHRRLLRP DEPFR
SEQDB ID: 3101377EDP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEKPFGVPP MHPANMAMLR QALAAGLRDY LRAPLFGVLF SGFYVMSGLL MAWITIWTGT
61 TFWLVLAAIG FPLLGPFAAV GLYEVSHRLE QGEPLDFAEI FGVVILQSRR QLPSICAIMV
121 LVFMFWFFLG HMIFALFLGL STMTNVSSSM EVFLSPNGLM MLAMGTVVGA GFAALLYMIT
181 VMSIPMLLDR ELDFVTAMIA SFGFVTANPA VMLAWAVILA VMTFVAMLPG FLGLFLVLPW
241 LGHASWHLYR QVTRDDAGT
SEQDB ID: 3101377EDQ
Reference:
3101377
Name: amidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVIRSSASD ILGALRSRQL SSEAVMEATL ARIAAVNPEL NAIVALRPTD ELLAEARAAD
61 AVAPEARGAL HGLPIAVKDL VETAGIVSSH GSPLFRDHVP ERDDLIAARI RAAGAILIGK
121 TNVPEFGLGS HTFNPVYGAT GNPYAPNLTC GGSSGGAAVA LATGMTALAD GSDMMGSLRN
181 PAAWCNVYGF RPSWGRVPSE PLGDTFLHQL ATLGPMGRSP ADIAILLDVI SGADPRQPHG
241 FDSAPVAPLR PAATRGLRLG WLGDWGGAFP TEPGILPLCE TALKIFSDLG CTVEKVPPPF
301 DAEALWESWI TLRSWSVGAG LAPLSEKRAQ LKDSAQWELD RGLALSAMEV DRASVTRSAW
361 FMRATELFES YDALILPSAQ VWPFDLDRPY PTEIAGQAMD TYHRWMQVVT PVSLIGLPSL
421 AMPAGFGDAG LPMGVQIFGP RGGDAALLAL GEAYHAATTW PQRHPGM
SEQDB ID: 3101377EDR
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLAHVCLIA RDAPALAEFY CAALGCSPRR PATRLSGAWV GHGIGLPEAE ILSIWLNLPG
61 GDAPFLEIQH FASTRDHAQP QPDTPGLRHL AFVTADIEAT ARAILAAGGS QQGKITDLGS
121 AEHPGRALYM RDPEGNLIEL EQG
SEQDB ID: 3101377EDT
Reference:
3101377
Name: peptide chain release factor, Isotype: 2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: prfB
Sequence:
1 MRAEIQNVVT DIQKSLRLLA QRMDQETAQH RLEEFNARVE DPNLWDNPEN AQKLMRERQT
61 LVDALDIYKG IETDLADNIE LIELGEMEDD QDVIKDAEAA LKALRERAAE KELEALLDGE
121 ADGNDTFLEI NAGAGGTESC DWASMLARMY VRWAEKKGYK VELQSESAGD EAGIKSAAYK
181 ISGHNAYGWL KSESGVHRLV RISPYDAAAK RHTSFSSVWV YPVVDDNIEI EVNPSDIRID
241 TYRSSGAGGQ HVNTTDSAVR ITHIPTGIVV TSSEKSQHQN RDIAMKALKS RLYQQELDRR
301 NAEINAAHEA KGDAGWGNQI RSYVLQPYQM VKDLRTGHET SDTKGVLDGA LDGFMAATLA
361 MKVSGKSRAD AQSED
SEQDB ID: 3101377EDU
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQGYLVTLG DGSLNPNDVI GGGLTTFSTD TALGAGSWTW SGTAGGTSYF NEVEPGSYYL
61 STDGNVYFVP DYGPVDSISS ASATTAPAYS SNDGIVSGTD AGEVIDAGYT DTDGDQIDNG
121 GPTSDTVDAG GGNDTVSAGG GADKVIGGEG DDSLMGGSGG DTLIGDADPS ALAPDPVTID
181 ITNYADTGSG FTVTAQNVVG GALTSASSAN IGTYSGGFGA SGTISDSDSA VSAQIGYDKA
241 SGLSENVTIT FDNGASEASF DFAHLYTAGY AEVGHWAVYN DGTLVAEGDF TEQGSGSGSG
301 TISISGVGSF DTLVLTAKPQ TDGTDGSDYT VTGVTFTPLP EEVIPGNDTL DGGLGDDLLD
361 GGGGDDSLIG GAGSDSLTGG AGNDTLIAAE GDSVLGGSGD DLIQITDLSE TGSGTITIVG
421 GDDGQTDGDT LDFQGNLDWG SLNITSTDTV TGAMSGSALL ADGTVVNFSG IENIICFAAG
481 TRIETDRGGR AIEDIAVGDL VLTRDNGLQP VRWTGRRSVP GKGRFAPIRI ASGKLGALRD
541 LLVSPQHRLL LSGYQASLLT GQTEVLAAAV HLRDDRHIRR APCPTVTYVH LMFDRHEIIY
601 AEGVASESFF PGSLGLEALA EPARDELFAL FPELRSGCGG FDETARLCLR QHEASVLARA
661 LLQ
SEQDB ID: 3101377EDV
Reference:
3101377
Name: penicillin-binding protein, Isotype: 1A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mrca
Sequence:
1 MIRFILSFFG AIFSLVTLGV FMVALTIGGV FWMYGRDLPS HESLAQYKPP TISRIYSGEG
61 QLIDEFAKER RLFTPADEIP DLIKQAFISA EDKNFYTHQG YDLRGIAAAG IEAVRSRGSN
121 VRGASTITQQ VMKNFLLSGD RKAERKIKEI ILAARLEQTL NKEQILELYM NEIFLGQNSY
181 GVTAAAQTYF NKTLAELAPH EAATLAAMPK APSDYHPVRE RQRLLDRRNY VLREMRENGY
241 IDMATYEAER EMPLRSVQNG DFEGFRTALP PRDYFTDEIR RQLSEDFGEG EFFTGGFTVR
301 ASIDEEMQVE AAKALREALQ KYDRGRGKWH GTGKSIEPAK LGDEEVWRAE LAATEVARDV
361 DLGGRWHPAV VLGVGEQDLS VGVEDGPAKG RVPRSDIKWM KGSFKDNFKL GDVVLVRKAD
421 EDWSLRQVPE VQGGFMAMDV NTGRVLAMQG GFSYQDSVFN RATQALRQPG SSFKPFVYAA
481 ALDSGYSPAT IVVDAPIEVN TPQGLWRPKN ASNKFYGPTP LRTGIERSRN LMTIRLAQEV
541 SMPVVAGYAE RFGVYDHMGP FLANALGSEE TTLYKMVAAY AMFANGGERV EPTLVDRIQD
601 RFGKTIYRHD QRDCVDCLSD RLEPDQAPRI VTNRERVMNA ITAYQLTSMM RGVVERGTAS
661 GTVKLPVPTA GKTGTTNDAK DVWFIGFTSN IVAGCYIGYD RPQPLGRGAS GGGMCGPVFQ
721 SFMTEAVKKF GGGPFEIPPG GHFIKIDRFT GARLPDDASG EYVVAEYFRD GEEPIFGLTY
781 DGGFAMGSNL PLFEEVQQSG QQVRTSTGAV TTVGPKANFG TVSSGGLY
SEQDB ID: 3101377EDW
Reference:
3101377
Name: MurNAc-Ala amidase, Isotype: family 3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRIFLCLAL IWAALPALAQ DFSGLARIRP DESRIETVPR GGLRLVLGLS QGVPYRLFTL
61 DAPRRLVLDF QEVDWTGLSA EALDQSDLVS ALQFGTYLPG WSRMVLELAS PLAVDQVAMV
121 VDEATGGARL EVALRASDDE SFAASAGAPQ DPRWDLPAPE ALPALPERGA DAPLRVVLDP
181 GHGGIDPGAE IEGVVEKHLM LRFARELSEV LLRSGGFEVV LTRDGDHFVS LERRIALAHE
241 AGADVFISLH ADSLSEGLAH GATVHVLAQE ASDIASAKLA ERHDRDDLLS GVDLSATDDR
301 VTDVLLDLAR QETRPRTEAL ARALVDGMTQ QGGPMNRRPL RGASFSVLKA ADIPSVLIEI
361 GFLSSPRDLK NLQDAKWRAA MAAGIRNGLE NWRQADLERR GLVRQ
SEQDB ID: 3101377EDX
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAHWEIAVK NSSRSAVDPF IVMDVMEAAR RAEEAGRRII HMEVGQPGTG APRGAVEALA
61 KSLETDALGY TVALGLPALR QRIARLYGEW YGVDLDPGRV VITPGSSGGF LLAFTALFDS
121 GDRVGIGAPG YPSYRQILRA LGLVPVDLPT APENRLQPVP ADFAGLDLAG LMVASPANPT
181 GTMLDHAAMG ALIEAAQAQG ASFISDEIYH GIEYEAKAVT ALELTDECYV INSFSKYFSM
241 TGWRVGWMVV PEDQVRVVER IAQNMFICAP HASQVAALAA LDCDAELQAN LDVYKANRKL
301 MLERLPKAGF TRIAPPDGAF YVYADVSDLT DDSRAFAAEI LEKAGVAVTP GLDFDPERGA
361 GTLRFSYARA TADIEEGLDR LEAFMQARG
SEQDB ID: 3101377EDY
Reference:
3101377
Name: peptidase, Isotype: M48 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAFDRVSRLA SIPALVLVTA LWLVTAGTAS AITLLRDPDI ENGLEELAFP ILRAAGLNPR
61 RVKLLVVDDS SLNAFVLDHN AIFIHSGLIQ KVARADILQA VIAHEAAHIA NGHIARRIGN
121 FENAQTLSKL GLALSLIAAA AGSGDAAAGI AAGTQSSALR GFLKHTRAEE SAADNSAASY
181 LRWSDISLRG LVDLHRTFAG QELLSVGRQD PYMQSHPLTR DRIRNAEAFL QSYGDKAPGN
241 PNAEYWFARV RGKLSAFSRS SKWTLGRAAE EQHRDIRLMR EAIAWHRDRN LARARAAIDG
301 AIALRPEDPY YVELKGQILM EHRQTQSAVA TYKQAVDLAP NNALILAGYG RALLSAGQDR
361 AALDVLERAR AREYRDLRML RDLAVAYAKL GNDGMASMVT AERYALQGRP EDALIHAKRA
421 VGALPTGSPG WQRAQDVLLA SERSVKRKR
SEQDB ID: 3101377EE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKMSFNCTP DATFPTGKGA TEQRFTATVG GDELEIDTHP WGEADLKIND KLVAHVDGDR
61 SGVSSG
SEQDB ID: 3101377EEA
Reference:
3101377
Name: 27kD outer membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMLRHIAPAV TALSLLSAPV QALDLSDMTP DQRAAFGEQV RAYLLENPEV IIEAVNLLEQ
61 RKAQEEAQQD LELVQVNAEE LFNDGYSWVG GNPDGDITLV EFMDYRCGYC RRAVPEVDEL
121 LKTDGNIRLI IKEFPILGEA SLASSRFAVA TLIVAGPDAY KQVHDALLDF TGEADEVALG
181 RIGEGLGLDT DAILAEMESE EVTRRLAETR ALAQRLNISG TPSFVMETEM LRGFLPADQM
241 RQIVDALRAE RS
SEQDB ID: 3101377EEB
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLLLSLVFA GFAFASAASA QTVVERADLM DVFEEASLSG TFVLFDVTLD QMQVVNRDRA
61 DERFIPASTF KFANSLIALE LGAVADENEL LPYGGSPQPV SAWEHDMTIG EAFAVSNVPV
121 FQHLARRIGL SRYPQWLTAL SYGNAELGHD VEHFWLKGPL RISAVEQARF MADLARMRLP
181 FSERTQRIVH EISMIETRNG AVLHGKKGWT TAPDPDTGWF VGWVAQGARI YSFALNIDMN
241 APDDAPQRMA LSLQLLDRLG IY
SEQDB ID: 3101377EEC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDMTTLAPLA GLLPAAGFFA LWYLTARRLR LSQFHIRQQT DRIKDLRRTL EGLDLELSMK
61 EARIARLSRD LSQSRNRPGA PMARAG
SEQDB ID: 3101377EED
Reference:
3101377
Name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, Class: EC1.17.4.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispG
Sequence:
1 MSHNPVRPWR NVYRRKSRQI MVGNVPVGGD APISVQTMTN TLTTDVAATV AQVQAAAEAG
61 ADIVRVSVPD EASARALREI VRESPVPIVA DIHFHYRRGI EAAEAGAACL RINPGNIGSP
121 DRVREVIRAA RDHGCSIRIG VNAGSLEKHL LEKYGEPCPE AMVESGLEHI RILQDNDFHE
181 YKISVKASDV FLSAAAYQGI AEATDAPIHL GITEAGGLVS GTIKSAIGLG NLLWMGIGDT
241 IRVSLSADPV EEVKVGYEIL KSLGLRHRGV NIISCPSCAR QGFDVIKTVE ALEKRLEHIK
301 TPMSLSIIGC VVNGPGEALM TDVGFTGGGA GSGMVYLAGK ASHKMSNERM IDHIVEEVEK
361 KAAALDAASA AEAAE
SEQDB ID: 3101377EEE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAASGSVRRG LLGLGVLRLG HQQLAQGKVL FGFQVGDLKP LEDGIHGQLN VLGDGAARTH
61 GAKMRAVHGK VDGARFANPQ GRRLFGQRDL IDAALLDRAQ RAFEDHAAIG SGDPHPGRAD
121 SNDLERRFEV FDDLRQQRLD RALGGAQLYF GQFGGLEVAH GARVQRCDRR IAGHQHRNIQ
181 RLRAIKPIQR LDRGGRHRGF QRATGAIQRI EIGQHQRRLF DRRHLHLLHF FQNRPAAITD
241 AADQRGQHQD RADGTRFDLR QKGVAARCKG CVGRDEGIVA DRTTLRWDTG FLDARGLGRH
301 AMRHLEPAFG AELGETVIRV HAQIAGIRTD IPGDETGCVK GGWVTIFDGG DIVGLDPKLA
361 LHIKQRLAHG GAFAPHGIAQ TQFEIVEAAR LLLFYVCRLA LRPAPDHPAA PS
SEQDB ID: 3101377EEF
Reference:
3101377
Name: 5-aminolevulinic acid synthase, Class: EC2.3.1.37
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemA-1
Sequence:
1 MDYSVKLDAA IQKLHDEGRY RTFIDIERRK GHFPHAVWTR PDGSEKEITV WCGNDYLGMG
61 QNPVVLDAMQ EALVAAGAGS GGTRNISGTT VYHKRLEAEL ADLHGKEAAL LFTSAYIAND
121 ATLSTLPKLF PGLIIYSDAL NHASMIEGVR RNGGAKRIFR HNDVAHLREL LAADDPAAPK
181 LIVFESVYSM DGDFGPIADI CDLADEFGAL TYIDEVHAVG MYGPRGGGVT ERDNLAHRID
241 IINGTLAKAY GVMGGYIAAS AKMCDAIRSY APGFIFTTSL PPAVAAGAAA SVAYLKGAQE
301 LRDQHQTQAR ILKLRLKGLG LPLIDHGSHI VPVIVGDPVH TKKLSDMLLE DFGIYVQPIN
361 FPTVPRGTER LRFTPSPVHG PKEVDKLVHA MDALWSHCAL NRAELAG
SEQDB ID: 3101377EEG
Reference:
3101377
Name: peptidase, Isotype: M20/M25/M40 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLDDVLSRI DADLPAAIER LMELLRIPSI STDPAYAEAC DQAADWLVAD LAGIGIAAEK
61 RPTPGRPMVV GHVEADHDDA PHVLFYGHYD VQPVDPLNLW TSPPFEPQLE DTPNGRVIRG
121 RGSSDDKGQL MTFVEACRAW KAVHGTLPCR ITFFFEGEEE SGSPSLVPFL QANAEELKAD
181 IALVCDTSMV SRGVPSIAAQ LRGMLKDEFT ITGPRIDLHS GHYGGPGLNP LRELSRIVTS
241 FYDQETGRVA VEGFYEGVHE VPAEQLRQWE SCGFDESEYL NSVGYSQAHG EQGYSTLEQQ
301 WARPTLEVNG LWGGYNGAGS KTVIPAQAHC KITCRLVGDQ DPDKLRVAIR KHVEAQLSPD
361 AGVIWDNDLE GSKASVMNIA RPEMEAARGA LSDEWGREAV FTGMGGSIPV VGFFKSVLGL
421 DSMLVGYAND DDAIHSPNEK YDVESFHKGI RSWARILDAL TR
SEQDB ID: 3101377EEH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRRLLPVGR AFLYRLGKRA GVFLVKVDSN TAVVTICRDD AYFLTRFVQY YGGLFGRNNL
61 YIISHGDEPL VRELAQGCNI FPVPAIETSQ FTMLHWRTKN HLKNALRQWY KHVLVCDVDE
121 FVVVDPATGM NLRTWLDDAP GRTVYTAMGL EIVHLRDREK DDIGGGILGP RRHAQVALHY
181 AKPCIVSRPA KIGRGGHYAE YEKLNMPDFL YMFHMKYCDY GLYVETLNRR NAFIEKQKEV
241 AGDGTVRTNP KWFADGRDDD AVFSAFERRP VVESFDLSHV REIMYSTWEQ RGDGLWHFHR
301 PEYDELYMLP VRFGGADCA
SEQDB ID: 3101377EEJ
Reference:
3101377
Name: pirin domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWNPLLDAD IPLGDGVDSI ETVIVPRARD LGGFEVRRAL PAPRRQMVGP FIFFDQMGPV
61 EFLTGQGIDV RPHPHIGLAT VTYLYKGRLH HRDSLGTDQW IEPGAVNWMV AGNGVTHSER
121 TDGPARQAPL SMFGIQTWVA LPEHLEETDA SFEHTPASAL PLLEAEGKQV RLVLGDAWGA
181 SAPVATTSEM FYADAQLAPG TALPLPDNHE DRGVYVTQGS VEVAGQSFEA GRMMVFRPGD
241 RLSLKAGAQG ARLMLLGGAT LGGPRHIWWN FVASSKERID AAKEAWRAGD WRHGRFRLPP
301 GDDGEFTPLP TR
SEQDB ID: 3101377EEK
Reference:
3101377
Name: transcriptional regulator, Isotype: RpiR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGTSKLVKQ RIQDETEQLT RSERQLASIL LQDYPMGGLQ SITKLAVAAG VSTPTVIRMA
61 RKLGFDGFPA LQDALREEVA AQIKKPISKR DGWVVDEGAE HPLMRFAQVV WANMRHTLER
121 TDTALFDRAA AILADTSRPL YVVGGRITRS NADYLYNHMQ IIRPNVTMLG NSANVWPQYL
181 LDMDQSSVLV IFDIRRYEAH LEKLAQIASE RGVTVILFTD QWGSPIGRVA DLTFNGLVEA
241 PSSWDSTIAL QLIVEALIAE VQGARWEESK ERIEELEAMF SSTRLFRSPT
SEQDB ID: 3101377EEL
Reference:
3101377
Name: For-Glu amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHMSSDAES PLLSPVEGPP ARVLNARGAG RGVLVCEHAS RFIPAALSGL GLSPEAACSH
61 AAWDIGAMDL AVELAGALDV PLVFSRISRL VYDCNRPPER ADAMPAQSEI YTIPGNADLT
121 PAQRAQRADA VYHPFRQLLS ATLDTRAAPP VLVTLHSFTP VYQGRTRSVE LGILHDSDDR
181 AAQLLLTAAQ GSGLRAALNE PYSATDGVTH TLREHAIARG LPNVMIEVRN DLIDTPAGVN
241 RITGLLAPML AGMIDTLAPS EAEA
SEQDB ID: 3101377EEM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTALRAYIRI VDRMNRWIGR LVMYGIFVMM AILLWSSFSK VGSDLGFDIN PSLWTLEMAQ
61 FAMVAYYILG GPYSIQMGSN VRMDLLYGEW SDRRKAWTDA ITVLFLIFYL GVLLYGGYDS
121 LSYSFQYGER SPTAWRPVLW PIKTIMCAGL FLMLLQALSE LAKDILRIRG EHIPREVI
SEQDB ID: 3101377EEN
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYELIAILM FSTMMVMLMT GQRVFGAIGF VAVLASLLLW GDRGGYDIGF SAAMKLMKWY
61 PLLTLPMFIF MGYVLSESKI ADDLYKMFHV WMGGLNGGLA IGTIGLMVLI SAMNGLSVAG
121 MAIGATIALP ELLKRGYDKK MVTGVIQAGS SLGILVPPSV VLVLYAMIAR QPVGQLWLAG
181 VLPGLMMAAM FILYIAIRCR LNPALGPALS PEERDVPMGE KLRLLRAGLL PLGIFAAMMV
241 PFVNGWTSLV ESSAIGALTA FLAAVFKGRM NRQVFETSVR STLGISCMFM WIILAALAFG
301 AVFDGLGAVK AIEDLFTERL GLNPWVILIL MQLSFIIMGT FLDDTAMLVI VAPLYVPLVG
361 ALGFDLIWYG VLYTITTQIA YMTPPFGYNL FLMRAMAPPE ITLRDIYGSI LPFVLVMTLA
421 LAIIMIFPQI ALWLPETVYN K
SEQDB ID: 3101377EEP
Reference:
3101377
Name: bacterial extracellular solute-binding protein, Isotype: family 7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTRRKFITT AAVGAAAAPL ATPALAQSTI KWRMQTYAGP ALAAHVIDPA IAMFNKIAGD
61 RMQIELFYAD QLVPTGELFR AMQRGTIDAV QSDDDSMASP TEVTVFGGYF PFASRYSLDV
121 PVLFNQYGLN EIWDAEYSKV GVKHISAGAW DPCHFATKDP INSLADLNGK RVFTFPTAGR
181 FLAQFGVVPV TLPWEDIEVA VQTGELDGIA WSGITEDYTV GWADVTNYFL TNNISGAWAG
241 SFFANMDRWN ELPEDLQTLF RVCCDQSHYY RQWWYWGGEA SLRVNGTKMQ LTSIPDAEWA
301 QVEAAAVKFW DEIAAESETK AKVVEIFKKY NADMAKAGRP YRYG
SEQDB ID: 3101377EEQ
Reference:
3101377
Name: gamma-Glu-isopropylamide synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTFETLKAQ VAAGTVDTVL VCLVDMQGRL MGKRFHAQNF LDSAYEETHC CNYLLATDLE
61 MATPDGYRAT SWQAGYGDYV MKPDLSTLRP LPWLEGTVMV LCDVLDHHSH EPVPHSPRQV
121 LKAQIARAEA LGLTPMMATE LEFFLFEGTF DEIRKTGYRN LTPISGYNED YHILQTSKEE
181 HVMRPLRNHL FAAGIPVENT KGEAEAGQEE LNIRYADALA CADHHTIAKH ATKEIAHQHG
241 HAASFLPKWH HDRVGSASHV HLSLWRGSEP AFYDKDAPHG LSELGRQFCA GMIRYAPDYT
301 FFLAPYVNSY KRFMKGTFAP TKTVWSVDNR TAGFRMCAEG TKGVRMECRI GGSDLNPYLA
361 QAALLAAGLQ GIEEKLELAP PTSGDVYDNA EAGEIPRSLR DAVGTLDGSA MLRAAMGDWV
421 IDHYTRCAQW EQEEFDRVVT DWEIARGFEK A
SEQDB ID: 3101377EER
Reference:
3101377
Name: aldehyde dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYAPRNWSS VMTRTVQCIS PIDGSVYLER PAATREAAMD AAERARAAQA AWAARPLAER
61 VALVLAAVAE VGKTTDRMAV ELAHQMGRPV RYGGEFGGFN ERATYMARIA ESALAPLVVE
121 DSDAFLRKIE REPFGVVLVV APWNYPYMTA INTVAPALMA GNTVILKHAA QTLQVGERMA
181 EAFHAAGIPE DVFQNIVLDH DTTAELISRR KVNFVNFTGS VRGGQAMERA AAGTFIPVST
241 ELGGKDPGYV RADADLDAAV DTLIDGAMFN SGQCCCGIER IYVHTSLFNA FVDKAVALVN
301 SYKLGNPLDP ETTIGPMANV RFAQVARDQI EDAIAKGATA HIERFAQDDG GAYLTPQILT
361 NVTHDMEIMR EETFGPVVGI MPVADDEEAI ALMNDCQFGL TASIWTRDTA RANEIGRRLE
421 TGTVFMNRCD YLDPALCWTG CKDTGRGAGL SVLGFHALTR PKSYHLKKA
SEQDB ID: 3101377EET
Reference:
3101377
Name: Fe alcohol dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLVGNWSYP TAIRFGAGRI AEIAEACKAA GISKPLLVTD KGLAAMEITT RTLDLMEAAG
61 LGRAMFSEVD PNPTERNVEA GLKVYREGGY DGVIAFGGGS GLDLGKTLAF MAGQTRPLWD
121 FEDIGDWWTR ADPAGIHPIV AVPTTAGTGS EVGRAGVITN SDSHEKKIIF HPLMLPKVVI
181 CDPELTVGMP KFITAGTGLD AFAHCVEAYC SPHYHPMSQG IALEGMRLVK EYLPRAYADG
241 SDLEARAHMM SAAAMGATAF QKGLGAIHAL SHPIGAHHHT HHGTTNAVCM PAVLQFNRPA
301 VEGVLAQAAA YLGIAGGFDG FAAYVDELNT SLGIPKTLTD LGVKDPNLDV LVRDALNDPS
361 TGGNPVTMTA ENTRPLLESL F
SEQDB ID: 3101377EEU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMYMIPPESA QSARAPLRIR HRSSSMKLRV AAAVLAVGLA PANLSAQSLV GANVDINHYQ
61 FTSKSKGARQ ALQGSFELGL GSSVSTQLDV GYYKFDQIGG SGRSATLHGI YQFGYGGAVG
121 GFWGTEDGGG IDRNFYGLEA VYDFSAIRLE GYFSRGRVQG ANATLLGGKI SSDVGSGPLS
181 LNASVDFMDN KSGANMTRMA IGADYGLGSG VNLYGEIGTG NARVANFSNN DAFVGVGLRF
241 DLGERPGTTF GRRALLDRLP GL
SEQDB ID: 3101377EEV
Reference:
3101377
Name: DNA-binding protein, Isotype: HU
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKRELIDLV VARSDVKKKF VKPAVEAMLA ILGEAISQER DLNLQPLGKL KVNRSADKGN
61 GQVIICKLRR STQAEEEVEK LDADPLAEAA E
SEQDB ID: 3101377EEW
Reference:
3101377
Name: ATP-dependent protease, Isotype: La, Class: EC3.4.21.53
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lon
Sequence:
1 MQEPLNASYP VLPLRDIVVF PHMIVPLFVG REKSVRALEE VMQEDKQILL SSQVDPGIDD
61 PDSDGIYRTG VLANVLQLLK LPDGTVKVLV EGQARVKITG FLENDVFFEA RAEYLTEIPG
121 DVTTTQALIR TVGDEFERYA KVRKNIPEEA LAAVGETTEP AKLADLVAGH LGIEVGQKQD
181 LLETLSVSER LEKVYGLMQG EMSVLQVEKK IKTRVKSQME KTQREYYLNE QMKAIQRELG
241 DGEEGAGEIA ELEDKIAATK LSKEAREKAE AELKKLKNMS PMSAEATVVR NYLDWLLSIP
301 WGVKSRVKKD LGRAEGVLDA DHYGLEKVKE RIVEYLAVQQ RSAKLKGPIL CLVGPPGVGK
361 TSLGKSVARA TGREFIRISL GGVRDESEIR GHRRTYIGSM PGKIIQALKK AKTTNPLILL
421 DEIDKMGQDF RGDPASAMLE VLDPEQNNTF MDHYLEVEYD LSNVMFLTTS NSYNMPGPLL
481 DRMEIIPLAG YTEVEKREIA KRHLLPKQTK NHGLRAKEFE LSDGALTDII RYYTREAGVR
541 NLEREVAKIC RKALTKILKK EAEKVSVTSE NLEDFLGVRR FKFGLAEKDD QIGVVTGLAW
601 TSVGGDLLSI EALRLPGKGR MKTTGKLGEV MKESIDAAAS YVRSIAPAIG VKPPRLDRWD
661 IHVHVPEGAT PKDGPSAGIA MVTSIVSVLT QTPVRKDIAM TGEVTLRGNV LAIGGLKEKL
721 LAALRGGVKT VLIPAENEKD LPEIPDNVKE GLTIIPVAHV SEVLKQALVR QPEAIEWDEA
781 AEEEAAAAKS ALPGGDGASA TAH
SEQDB ID: 3101377EEX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAAQRGGQRR KVGFAGLETG SDTLLAALRI DLKTKEFAVK RLMSAVMCIW GGLAGAAELD
61 GCALGAQDYP EIVAPLLEGA WRVHNGPGLM MMKMGANEMK MPIPPMGHEM MAMLYRDGAV
121 FANMAQFGEA EVRLADADNQ IVPVPVDGAQ RDLDFDRLGL APDCGTDGML RLEFEQERID
181 EDGTHLWLHV QLALLDEDRL GGVLTVQGRG SDGAETHARR LVSFLRH
SEQDB ID: 3101377EEY
Reference:
3101377
Name: NADH-dependent flavin oxidoreductase, Isotype: oye family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETLFTPLK AGNIALKNRV VMAPLTRNRA DDTAGTVFDR HAEYYAQRAS AGLLITEGAQ
61 ISAEGKGYIQ TPGIHTPEQV AAWRKVTDAV HARGGKIVIQ LWHVGRISHS SLLPDGQAPV
121 SPSAIAAEAK TFTHAGFETT STPRALETDE IARVLADYAH AAQSAREAGF DGVEIHAANG
181 YLVEQFLKDG ANQRQDDYGG SVENRARFLF QVLEAVLTVW EPGNVGIRLS PFTTVNGISE
241 SDPVATYTPV IKRLDSYGLA YLHMIEGQTG GARDGAFDDL RQLWTGAYMG NNGYDRASAL
301 ERTETGAVDL VAFGRPYIAN PDLVERLAAD APLNMGDTAT YYGGGDEGYT DYPVLQTA
SEQDB ID: 3101377EF
Reference:
3101377
Name: protein/phosphate acetyl/butaryltransferase, Isotype: maoC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQYIENKTFD EIRIGDSAEL TRKLKADDIE LFAVMSGDVN PAHVDEEYAR SDMFHEVVAH
61 GMWGGALISA VLGTELPGPG TIYLNQNLSF RRPVGLGDTV TVRVTVASKD AGTKRLKLDC
121 LCVNQDGETV IKGQAEVIAP SEKVRRPRVV LPDVHLHERG ARYRDLIAAT HAMAPVRTAI
181 VHPCDALSLT GALEAASQGL IVPILVAPRV KLEAVAEEAG LVLDGVEIVD VPHSHAAAER
241 AVALVRCGKA EALMKGKLHT DELMDPVVDR DTGLRSERRM SHIFALDVPH YPKPLFVTDA
301 AINIFPDLDT KRDIVQNAID LAQALGIDRP KVAILSAVET VYPKIPSTIE AAALCKMWDR
361 GQITGGVLDG PLAFDNAVSK SAAKAKGIVS EVAGDADILV VPDLEAGNMI AKQLIHLAGA
421 EAAGIVLGAR VPIILTSRAD GVMSRLASSA MAQLYIHHAK KVVS
SEQDB ID: 3101377EFA
Reference:
3101377
Name: queuine tRNA-ribosyltransferase, Class: EC2.4.2.29
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tgt
Sequence:
1 MSERFSFDLH ASDGKARTGV IHTPRGGVRT PAFMPVGTAA TVKAMMPESV RATGADILLG
61 NTYHLMLRPT AERIDRLGGL HRFMNWDRPI LTDSGGFQVM SLAGLRKLTE KGVTFKSHID
121 GSKHELTPER SMEIQRLLGS DIVMCFDECP ALPADRDRIA ESMRLSMRWA ERSREAFGDR
181 PGHALFGIMQ GGLEQDLREE SAQALRSVGF DGYAVGGLAV GEGQAAMFDC LDYAPGFLPE
241 DKPRYLMGVG KPDDIVGAVK RGIDMMDCVL PSRSGRTGQV FTRHGVLNIK NARHMDDPRP
301 LDEACTCPAC RNYSRAYLHH VFRSQEIISS MLLTWHNLHY FQEIMQGMRE AIAGGTFEAW
361 EAAFHAGRAQ GDIEPL
SEQDB ID: 3101377EFB
Reference:
3101377
Name: SPFH domain/band 7 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEDQIIGLL SQNIIYLAAA IFIIVVILKG IRIVPQSEKF VVERFGRLHA VLGPGINFIV
61 PFLDVVRHKI SILERQLPTA SQDAITKDNV LVQVDTSVFY RITEPEKTVY RIRDVDGAIS
121 TTVAGIVRAE IGKMDLDEVQ SNRAQLISTI KSSVEDAVDD WGIEVTRAEI LDVNLDQATR
181 DAMLQQLNAE RERRAQVTKA EGAKRAVELN ADAELYAAEQ TAKARRIEAE AEAYATEVVA
241 RAIAAHGLEA AQYQVALKQV EALNALGNGA GKQTIILPAN ALEAFGDAFK LLKGGK
SEQDB ID: 3101377EFC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDALWSVWW LWIAGALALG VVEMLLPGFI FLGFAIGAAL TGLMLLAVTP SLPVLLLVFA
61 ALSLAAWLLL RRSFALPTGQ VKTFKDDING
SEQDB ID: 3101377EFD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHATEPMEG APLIAPSSVD HDLYEPVVEA CRTVYDPEIP VNIFELGLIY TVEISDENEV
61 RVIMTLTAPG CPVAGEMPGW VAAAVESVPG VKSVEVEMTW DPPWGMEMMS DEARLELGFM
SEQDB ID: 3101377EFE
Reference:
3101377
Name: Fe-S cluster assembly accessory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEIFMFGIPG KQAVTMTPRA ATQIARLMDK GGHTGLRIGV KKGGCAGMEY TMDYVDQADP
61 HDEVVEQDGA RILIAPMAQM FLFGTEIDYE VSLLESGFKF KNPNVVDACG CGESIKFDES
121 LASR
SEQDB ID: 3101377EFF
Reference:
3101377
Name: triose phosphate isomerase, Class: EC5.3.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tpiA
Sequence:
1 MRRKLAAGNW KMNGTGAALD ALEAIAGAHS AAAVDLLICP PATLLYRAAQ VAEGSRVRIG
61 GQDCHAVTAG AHTGDISAMM LADAGASAVI LGHSERRADH GETDAQVCDK ARAALEAGLI
121 AIICIGETLA QREAGQTLDV VCAQLAGSVP DGIDGTRVVV AYEPVWAIGT GLVPTLEQIA
181 EVHDTLRQQL IGRFGSETAE AIRLLYGGSV KPGNAAEIFA VSNVDGALVG GASLTAADFS
241 PIVSALEQAA G
SEQDB ID: 3101377EFG
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLVRAGWSG DHARMTSQML VVRQASHQDL PQLFDLYRHL NPEDVPPPAP DVARDILNQL
61 CRYEGSAIFL GEVTGTLVAS CTLIVIPNLM RGGSPYGLIE NVVTHGDFRK RGFGKALLDH
121 ASAAAWQAGC YKLMLLTGSS QPEVLRFYQG AGFEQSKTGF QKRRVPPRPE G
SEQDB ID: 3101377EFH
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWALWTTFA MVSAVNIVTP GPANLNTLRR ALQLGARRVV PTILGNALGL ALGGTLCAAG
61 ITAFAMASPL WWQAFRWIGI AYLVWLGVKL LVKREKILSA EADGPAVRAH ALFAEAFLLA
121 ASNPKALLFY IALFPQVLDP AQPLAPQAAL LIASYCALSI LSLGTYSALA QLLRRSVMTQ
181 ARYDRFRQVS GVVLIGFALK LMLGA
SEQDB ID: 3101377EFJ
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFTEEPALD PLDRAILAAL VQDARSGWSE LAAQTGVSAP TIRERVRRLI DSGVIRGFTA
61 EISPQALGYR LEAVVRFRPL PGKRHILEQR IQETDRIVQC DKVTGEDGFV ARILLRDIGE
121 LDPLLETFAR MATTHTSIVK SSPVRMRPPA F
SEQDB ID: 3101377EFK
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHKGIAMTG ASEPGRLGQL YATHAARWHA SITRLGYPDA YARLTRCDLQ RRAAPARQVL
61 DAGCGTGAFA EAYLSQSRGA KPALTALDPS PEMLDQARSR LAPWQPDCRQ GQLEDLTRLS
121 ARFDTVLCAH VVEHVADLGA ALEQLRAALL PGGSLLLSVS KPHWCTALLR WRWGHRAYRP
181 EQVCAALAHH GFGQIEPVRY VKGPPSRTSC GYRAVRK
SEQDB ID: 3101377EFL
Reference:
3101377
Name: TRAP transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVVLLFVMV VGFLLIGVPI AVALGFSSVL FLLIFSDSSL ASVAQTLFQA FEGHFTLLAI
61 PFFILASSFM TTGGVAQRII RFAIACVGHL RGGLAISGVF ACMMFAALSG SSPATVVAIG
121 SIVIAAMKQA GYTKEFAAGV ICNAGTLGIL IPPSIVMVVY AASVEVSVGR MFLAGVIPGI
181 LAGVMLMVAI YVMATIKGMP KGDWAGWGEI GDSFRDALWG LMLIVVIMVG IYGIPGITKA
241 IFTPTEAAAV ASVYAFLVAS FVYRDMGPLA AENNGGVRKS LLTRPLALVG AFFHKDTRNT
301 LFEAGKLTVT LMFVIANALI LKHVLTDEQV PQHVANAMLS AGLGPITFLI VVNVILLIGG
361 QFMEPSGLLV IVAPLVFPIA IELGIDPIHL GIIMVVNMEI GMITPPVGLN LFVTSGVAGM
421 PMMSVVRAAL PFLAVLFVFL ILVTYVPWLS TVLPNALMGP EIIIK
SEQDB ID: 3101377EFM
Reference:
3101377
Name: TRAP transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPHKSESWV DRIEETIIAV LLGCMTVITF ANVVARYVFN HNILWALELT VFMFGWLVLL
61 GASYAVKKNA HLGVDAVINM LSPKGRSVMA MISITVCILF TLLLLKGSWD YWSNFANLPQ
121 TTGRVFPTGF EDEFRPKGWY ETNDIPHPAI LGWMETVFNE GDEYEKLPRL VPYLVLPLSM
181 GLLLWRFLQV ARSIWTGGQD RMIASHEAED ELEEVREQLG KDD
SEQDB ID: 3101377EFN
Reference:
3101377
Name: TRAP transporter solute receptor, Isotype: DctP-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFLTTAATA LALTVTAGAA IAACDDGEIV VKFAHVTNTD KHPKGIAASL LAERVNAEMN
61 GTMCMEVYPN STLYNDDKVL EAMLQGDVQL AAPSLSKFEK FTKKFRLFDL PFMFKNVDAV
121 DAFQTSDAGQ ALLDSMQKRG LQGLAYWHNG MKQMSASKPL LVPSDANGLK FRVQSSDVLV
181 AQMEAMGASP QKMAFSEVYG ALQQGVVDGQ ENTWSNIYGQ KFFEVQDGTT ETNHGIIDYL
241 VVTSVDWLDS LDAGVRDQFL TILTEVTNAR NAESTKVNNE ARDAILAAGG VVRQLTAEQR
301 QEWVDTMKPV WDKFVDDVGQ ESIDAAQAIN ASM
SEQDB ID: 3101377EFP
Reference:
3101377
Name: C4-dicarboxylate transport transcriptional regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGKVLLVDD DAAVREALGQ TLDLADYAVQ TAGSFVAAKD HITATFDGVI VSDIRMPGRD
61 GFHLLSYAQD IDPDLPVILL TGEGDIPMAV RAMGDGAFDF LEKPCAAADL LAVIARAMAA
121 RAQVLETRAL KRQLDRGDPA ARMLFGTSAR AEALRERVRG VAPTGAEVLV TGPAGSGISK
181 VAEVIHLMSP RALGGFVKRA AAGLDAAELS RLSSETAQGS LFLDEVSALS QAAQYALLEE
241 MEQAGGARLL AGSTADLAAL VGKGSFNADL FYRLEGMQVR IPALAERPED IPVIFRHYVM
301 QAAEQAGIAT PAVTPDHLAA LMAQDWPGNA RSLMSAAMRF VLGMPEEVSE AAELGLAEQM
361 ARVERTLLIA ALGRHNGRAV EAAQALKLPR KTFYDKLARY GIKPEAYRR
SEQDB ID: 3101377EFQ
Reference:
3101377
Name: C4-dicarboxylate transport sensor protein, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRWWVISGF LAAVALLAAG VWTYGYGQAL SQLARRAEAD LELASDRLGT QLQVYQELAV
61 LMAEHPALKG LEQPVRRPAA QALLLEVADK TAALDVLFAA PDGRVLASAH GAAGKDVARW
121 PAFRRAMHGA LGSEHGLLPG AFRRAYAYAA PSFGADGRVM GALIVIADVA DIEQTWRGNT
181 PAVFFTDDRG EVFVSNRSEL LFWTRPAGKA GLAPAKGPAH EFAAYRVGGH EIWRLDWGPY
241 LPARALHMTR PLPVIGMTGE VLVDVAPARR IAGLQAAAVA AICLAFGAML FLATERRRTL
301 SEANQVLESR VAQRTRALTA ANSALRREVA ERQEAEAALK RAQAELVQAG KLSALGQMSA
361 GISHELNQPL MAIRQFADNG TAFLARGKTD KARENLGRIS DMAARMARII KNLRAFARNE
421 SEPVGRVDLV QVIEAAVELT EARLREHAVT LDWNPGTVGP VSARGGEVRL TQVFVNLITN
481 AADAMMDQDR RHIRIAIETG PRLLVRVQDC GPGLKEPEKV FEPFYSTKAV GSSEGMGLGL
541 SISYGLVQSF GGNIRGSNTG SGAEFTVELD PWQEEAAA
SEQDB ID: 3101377EFR
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVRIDETDR KILVELQRDA SQSLDEIASR VGSSKTPVWN RIRKLKGAGV IGQQTVILDP
61 EALGFEACFF VLIRTSEHEA EWQQQFLKAL QDRPEVQEAH RLAGDIDYIL KVRVKNARAY
121 DAFYQALISE VRVHNVTALL SMEEIKSTTV LPL
SEQDB ID: 3101377EFT
Reference:
3101377
Name: uroporphyrin III C-methyltransferase, Class: EC2.1.1.107
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobA-1
Sequence:
1 MTASRIYPGS GHVDFVGAGP GDPDLLTVAA LKAFAAADVV LHDRLISDAV LALAGETATL
61 VDVGKAGFGP SWKQGDIDAL LVDHASRGAR VVRLKSGDPT VFGRLDEEID AVSAAGISWR
121 IVPGITAASA AVAGIGQSLT RRGRNSAVRF LTGHDMQGFA DHDWTALARP GAVAAIYMGK
181 KSARFVQGRL IMHGADRATP VTLVENASRP DQRVLATTLD RLPADLAAAE MDGPALTFLG
241 LAPRDAATAL STINKELA
SEQDB ID: 3101377EFU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARAFTPKVV TANDLLDGDV IYQTADDRWS RVLSEAELIT DEAHAQLRLL DASRQAARVV
61 GAYLADARPG PNGPEPVHFR EDFRRTGPSN YAHGKQETSP QPRT
SEQDB ID: 3101377EFV
Reference:
3101377
Name: sulfite reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYRYSEFDTA FLAERNAQFR AQVERRIDGS LTEDEFKPLR LMNGLYLQLH AYMLRVAIPY
61 GTLNAAQMRQ LALLAEKWDK GYGHFTTRQN IQYNWPKLRD VPDMLDALAE VGLHAIQTSG
121 NTIRNVTADH FAGAAADEVA DPRPYAELLR QWSTDHPEFQ FMPRKFKIAI TGSANDRAVI
181 KAHDIGLQLV VRDGVLGARV IVGGGLGRTP MIGQELSPFV AFDDLLAYLE ATVSVWNQIG
241 RRDNKYKARI KITVFEHGIE AIRARVNERF VKVRGRFKGA DMALLDEIKG HFAPPSWRTS
301 SLAPFEAAYA KDPVFRSWVD TNIAAHKQAD HAIVTISLKA HGATPGDATA EQMRVMADLA
361 ERYGYDELRI SHEQNVILPH VHKSDLPAIH AELAANGLGT ANIGLISDII ACPGMDYCAL
421 ATARSIPVAQ EIATRFEELK LEHEIGALKI KISGCINACG HHHVGHIGIL GLDRAGVENY
481 QITLGGDATE TAAIGERTGP GFAYDQIVPA VERIVETYLD QRRDREESFI ETYRRVGMAP
541 FKAALYPEAR ADAA
SEQDB ID: 3101377EFW
Reference:
3101377
Name: phosophoadenylyl sulfate reductase, Class: EC1.8.4.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cysH
Sequence:
1 MPLDEIQTEL GRDRSVLTQK VAALNARYKH HSATDVMHGA LREAGDIALV SSFGAESVVL
61 LHMAAVIDRQ VPVLFIDTQM LFAETLVYQQ EVSERLGLKN VQVIRAAEDD VARDDPYGAL
121 RLRDTDACCT LRKTIPLQRA LSGYDGWITG RKRFQAGTRA ALDFFEVEDG TGRIKVNPLA
181 HWAPEDVRAY MEENRLPRHP LVAQGYPSIG CAPCTSPVAP GEDPRAGRWR NQNKEECGIH
241 FVDGKMVRNG DKT
SEQDB ID: 3101377EFX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVIVTDQGF QPEDWTDGFV ALGDVANDVV ALDVPADADP DTLATRLDRV RMVRVDFPSF
61 ADGRGFTIAR TLRLHGYTGR LRAKGHVLAD QYAMARRAGF DEVEIDAALA DRQPEAQWLA
121 RADWQAHDYQ ARLRG
SEQDB ID: 3101377EFY
Reference:
3101377
Name: ferredoxin-NADP reductase, Class: EC1.18.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEMRPVTEA AAIKAPTLPD SQTVTQVKHW TDRLFSFRVT RPASLRFRSG EFVMIGLLGD
61 NGKPLLRAYS IASPAWDEEL EFYSIKVQDG PLTSKLQHIQ PGDEIILRPK PVGTLVHDAL
121 LPGKRIWFFA TGTGFAPFAS LLREPQTYED YDEVIITHTC REVAELEYGR QLIEEIRQDE
181 LLAELMGEGF ADKIRYYPTT TREESPRMGR ITELLKDGTV FADLGIDGGI KAETDRAMVC
241 GSLAFNHDIK AILEGFGLTE GANSDPREFV IEKAFVG
SEQDB ID: 3101377EG
Reference:
3101377
Name: acetate kinase, Class: EC2.7.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ackA
Sequence:
1 MTDVVLVLNA GSSSIKFAVY PSGTNTVPLI RGKVAGVGRD PVFSAVRADG TAIDMVMPKN
61 IDAAADHEAL ISLLLDWLAE HRADRRLVAV GHRVVHGGRD FLKPVIVDDS VLSQLEQLIP
121 LAPLHQPHNL AAIRAISRLQ PTVPQVACFD TSFHQTQDRL AQLFALPRDL SDEGIIRYGF
181 HGLSYEYIAG ILPDHLGERA EGRVIVAHLG NGASMCAMKN RQSVATSMGF TALDGLMMGR
241 RCGALDAGVV LYLMQSKGLN ATEIETLLYR RCGLLGVSGI SNNMRELERS DDPKAREAIE
301 LFCFRAASVL GGLVTALGGL DAIVFTAGIG ENSALVRKLI CDRLACFGVD LDPNSNEGNS
361 PRIGSVQSSI DVLVLPTDEE IVISNATNET VALG
SEQDB ID: 3101377EGA
Reference:
3101377
Name: translation initiation factor, Isotype: IF-3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: infC
Sequence:
1 MARRPHNAPP QRDTGPRVND KIRASEIRLI GADGENVGVV HPAKAMAMAE EAGLDLVEIS
61 PNATPPVCKI MDFGKYKYEQ QKRESEARKK QKIIEVKEVK FRPNTDTHDY EVKMRNVYKF
121 LENGDKVKVT LRFRGREMAH QNLGRELLER VAEDVKEMGK IENMPKMEGR QMIMMIGPLP
181 QK
SEQDB ID: 3101377EGB
Reference:
3101377
Name: molybdopterin biosynthesis protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFGPVPVAG ADGAILAHSV QAGPKKLRKG LRLEPGHLEQ LAQAGIAEVI VARLDPGDCH
61 EDDAARQLAA ALAPDPGAAG LRVSAPFTGR VNLLAEGPGV VCLDVAAIER FNLVHPMITV
121 ATVPQHQQMG PGGMVATIKV ISYAVPQADV TRAVEAARGA IRLASPVLRS AGLVVTEIPG
181 GPPNDKGIAA IRGRVEALGL TLDDLRLVPH RGGDLAAAIS EISGDMVLIL TGSATSDPED
241 VAPAALRAAG GAVERFGMPV DPGNLLFLGA LGARPVIGLP GCARSPALNG ADWVLSRVAC
301 GVPVTGRDIA AMGVGGLLKE IPTRPQPRAG RAGASESGPK TDSQTA
SEQDB ID: 3101377EGC
Reference:
3101377
Name: XdhC/CoxI family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEASMERFDN APETALAWHR QGLGAALATV VETWGSAPRR VGAQLVIGGD GRIEGSVSGG
61 CVEGAVIVEA LEALEEGQAR LLEFGVSDED AFAVGLACGG TIRVLVEPVG QVLSEVMLAE
121 LVAARASRQA LAYVVDTARG TRALVRDAYP ERMRMDRSGF DEDGRTFVAV HNPPLRLIVV
181 GAVHIAQALV PMARIAGYDP VVIDPREAFA SDARFPGETI LHDWPDEAVA KLGLDARTAL
241 VLLTHDPKLD DPALEAALAA DVFYIGALGS TRTHAKRVAR MQEAGFTEAQ IGRIHGPVGL
301 DIGAAGPAEI AVAILAQMTA VLRGRA
SEQDB ID: 3101377EGD
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSIILAIVI GAAFGAVLDR VGAANPNVIN RMLNLTDLRL AKAILLAIGT GSALMFGGQM
61 LGLVDVGHMS VKTAYLGVFL GGLMLGAGWA AAGYCPGTGV VAAASGRKDA LFFIAGGLLG
121 AAAYMVTYPA WKASGLLDKI AGGAVTLGSV PGAKYEGLTT LPGDILGLVL GLGFVALAFA
181 LPDRLMGEGV PRTAPAE
SEQDB ID: 3101377EGE
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQNVTLQEGR PMTLNWKIGG LLLGLVFFAA VLLVKPIGVS TQFVILDGIL ADAVMTDLVT
61 KTEEGYTSTN AYLAKSGGKY AKSVANPLNY SFVFVLAMML GGFLSLMARG GLDRAERAIP
121 ALWRANFGDS AVKRYAVAFL GGFIVLYGAR LAGGCTSGHM MSGMMQTALS GYIFAAGAFA
181 AAIPVSILMF RKEV
SEQDB ID: 3101377EGF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALRDSDRA FWTAYPYATG AGGALDPDTA RQGDDPALAL AGHVIAVNQP FLRQHRVWPR
61 LQRCQTWLLP GSDQVNARAI QAGARRAVYL HGGLLRGLWN ALHMLLGSSR FLADRFGWQV
121 ADLRPPPPAP GGVLLFPEVR GGNGTDPLSY LKEAYGRAVE FIYFHEIAHH GRDHIARLRA
181 AGGQGFVDEG LAMAAGAGAK GELVQLLEFD ADLSAVDMCL NATGFAGWTK GEAPRFADPD
241 HMTSEFYLHL SGIVTLFMLL DRAAPDAPAR YDRGHPPALH RAIRLSVALS DTVQSATGLS
301 RAQVDPFLDQ AWSEVVALAG RLGYPPGLWT GRQDQIARIG LLDKIADRAN ALSREIDAEL
361 SR
SEQDB ID: 3101377EGG
Reference:
3101377
Name: VWA domain CoxE-like family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEYAPLALP ENPRLAHNIT HFARALRKAG LPIGPGRVID AVRAVEAAGF TEKRDFYWTL
61 HACFVNRPEH RAVFAQVFRL YWRDPRYLEH MMSMMLPAIR GVQEERSAQA AEKRAAEALL
121 DGIQPELPEP EPEKEGEETL IEVDASLTMS AEEKLKTLDF EQMSTEEVAR AKRMLARLTL
181 PVKPIPSRRR QAAQLGPRID RARTLRAAMR RGGELRDIAK AQPRLRWPNL IVLCDISGSM
241 SQYSRMVLHF LHAVSNAKGQ GWAKVHAFTF GTRLTNVTRH LRQRDVDAAL KAAGAEAQDW
301 EGGTRIGACL HAFNRDWSRR VMGQGAVVLL ITDGLDRDDP DALAAEMQRL HLSCRRLIWL
361 NPLLRWSEFA PKARGIRAML PHVDSFRAGH SIASLEELAE VISQADDMGE KARLMAALAG
SEQDB ID: 3101377EGH
Reference:
3101377
Name: protease, Isotype: S2 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLYWHHSSRP KSVFHPAFKG KTMSDLISTH ALLAPEAQHP QRSDLCIERV GDTAASAGFN
61 PGLERAADLT ETSVSGFAEA REASAAGMAD DELDALMNPT GFQTEVVIGF DDRIRISPAN
121 RWPWAVHGHM EMTFPDGRRF IGSGTMINRH HVLTAGHCVF SRDNGGWATE VIFQAARDDG
181 ALPFGTSSAV RLLSVAGWTN GENPEFDMGM LILGDELGER TGWHGIVTGP EAMLSNHRVN
241 VSGYPGDKGG RTLWTHKDVI KSVTDTKVFY DIDTAGGQSG SGVWSVWDGH AGEKVCAIHT
301 TGSQSGNGAV RINRDKFDRI IGWMARH
SEQDB ID: 3101377EGJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQAPSIDAV QQMLGEQGYV CGRALATVVF LSLRLGRPLF LEGEAGVGKT EIAKAIAAAL
61 GRRLIRLQCY EGLDAASAVY DWNFAAQMVA IRTAEAAGGA DRGALQTELF SDEFLIERPL
121 LQAMRPDPAG APVLLIDELD RTDEPFEAFL LEALSDFQVT IPELGTVKAP EPPIVILTSN
181 RTREVHDALK RRCLYHWVDY PDFDREIEIL HARAPEAAET LSRQVVAFVQ TLRTEDLFKK
241 PGVAETIDWA KCLLALDVID LSPEVIADTL GAILKYQDDI QKLQGSEAKR ILDQAKASLE
301 PA
SEQDB ID: 3101377EGK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHKDCDDSL SLRGLLTLVR ANVMTLETIG GRQNRSQTGD GSNNFQDGPG GQGGPMRITA
61 VTCVKNEGPF LLEWIAFNRL IGVTDFLFYS NDCSDGTDRL LDALAMAGPD LADLCGNVVH
121 LPNPAEGRNY QMEALKDAAH RTVVQAADWV WIADVDEFLN IHVGDNTIPA LIAACGDPTA
181 ISVHFQFFAN DGIDGFEDRP VIAQFTRSHN PDIWCGETAI EVKSLTRRDF PLQYFGAHRP
241 FFSKKQGKKK GLAWADGSGR QVPHKFLVAA NPRRIRKFPA KGARNFATLN HYALRSLDSY
301 LVKNDRGDVN RENRAFDDSY WRERNDPAWQ ETSIARYLPA LEDALERIKA HREIGALHDE
361 AVRLHREKCA ALLNQPAYRE MQAQLRAAST LPPDEEALLQ EMGML
SEQDB ID: 3101377EGL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMARLRVINL GLPKSGTTTL GVALRASGLK VADWKVRKFQ SANPEVARHF LGDLMYRGYF
61 ETGDPLHLLD EFDAMTEINV VGGELNRWPQ TDWGLLEAII ERHPGAKFIL SYRDPEAQAN
121 SMIRWTNLGR KRLRIFDVPG LPGKFGRAPA DIVRWIDGHN RFCRRVFAGD PRFLEYDILD
181 PEAPARIGAF LGLPIRWWGT VNENPETGAE TVTETVSEPD AAPSEDQTS
SEQDB ID: 3101377EGM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIVLHIGPE TTGADRIQSI LSDKREGLKS QGVLFARSPG NRNHMRLYMS VSDPEHVDPF
61 RYNRGYAAPE AQEQLREAMI EGLRAEIAAS RPDTLILSAA QMASSFHRPS EVARLRDLLA
121 PLSNDIQVVA TVSDPARMLL DHYAAQVSEG RATPLEQELN LIGAPGWWQA ATAAMPAIDP
181 IRGIFEETQG PAFWLDLVGL VALWEAGFGA GAVRLFSHDP ADLASPGATE LVREMFGITR
241 GIGRAEPALP APLPSAATLS RQRRFNEILL RYMASGDKVV SRQLWRSLLD ELVVDGTPPT
301 PDGLAAISTR FEAANSALML DHPGMNEDQF TPPPAADWVE ADPERGFRAS QYLLAARWRI
361 DKLSAEQLAL RAEQLAVAPA ETAPAPPAAP QVEAESDDSL SETARRLMPP LAVQNFEKLR
421 KSSYAPHNRI GAVDEEQLAA SFSPAKPRKL AKGKTGNLIV GCMKNEAPYI LEWVAYHRAI
481 GVDNFLIYTN DCSDGTSEIL DRLQALGVLQ HRNNDNWKGN SPQQHALNQA LKEPVLKNSD
541 WIIHIDVDEF INIRCGNGTL DDFFAAAPDA TNVAMTWRLF GHNGVTELKD EFVIDQFDAC
601 APKYCPKPHT VWGFKTMFRN IGAYEKISCH RPNKLDEAFE TKVKWVNGSG QDMTGEALKS
661 GWRNSKKSIG YDLLQLNHYA LRSAESFLVK RQRGRALHVD RSIGLNYWIR MDWNDHRDVT
721 IKRNLPRMRA EYDLLMQDDT LRDLHAAGLD WHRAKAAELH GMPEFEDLYR QALEVRLSGT
781 ERVAYALALD VES
SEQDB ID: 3101377EGN
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADGPQTNEG KFLTSRGMRF PLDTDILPKR VRLLLRTDGY EAKEARAAYR MMKEGDVVME
61 LGAGIGFMST LIASKTRAAE VHCFEANPRL IPYIEAVHAA NGVTNAHIHH ALLGDKPGRR
121 TFYQRSSILD SSLAPLPEDD ETVEKVQVPV RGAAKAMADI RPSVLVCDIE GAEVDLLPQL
181 DLSGLRAVLI ELHPQWVGKE GVAQVFEAMR RAGLVFFPRW SQGKVAVFRS DW
SEQDB ID: 3101377EGP
Reference:
3101377
Name: glycosyltransferase, Isotype: group 2 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSLAVLTVR NEAAFLLEWL AHHQALGFTD FLIFSNDCQD GTDQMLDRLA EMGQLVHLRN
61 DGPYDKGGIQ FTALKAAARH KLVKQADWIL PLDVDEFVNI HVGDGSLSAL YEALPHATAI
121 TLTWRLFGNS DTPRYVDAPI TEQFTRCAPE IMYWPWRASM FKTLYRNDGT YRKLGVHRPR
181 SPVPERLETS HWYDGHGRPL EEMFRENRIF SSYGRPNYGL VQLNHYPLGS MESFVLKADR
241 GRAVHSEHML DVDYWVERNF NTDSDDSILR YGERSAPLRQ ALLADRKLAR LHQRAVEWRQ
301 KRFTELMKQE PYRALFARLL MTPPSRLISA ASARTLVGFA NLGRMETADD GPENDPKPA
SEQDB ID: 3101377EGQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDAKTSIDE SIAGFRREVW KQKLLEQAEA EGMAQELGAR HFATFIDRDA TLLVTFETAE
61 GIRSISETHQ PFGFELVKSK GWSHLCIISD GDTWFRDPKV YGFFDRLIDD GFFEDFDQVV
121 FYGAGPCGYA AAAFSVAAPG ATVVAVQPQA TLDARMTEWD DRFTEMRRVS FTDRYGYAPD
181 MLDAADHAFV LYDPAESLDA MHATLFARDN VTRLRMRYMG AELQARLLDM NLLYRILLMA
241 GTGKLNAKSF FQIYRARRSY PRYLKGLVAV LDRQNRPYLN MVLCRNVIAR MPARRFRRRL
301 EELEEDARVG KFAPPPGQA
SEQDB ID: 3101377EGR
Reference:
3101377
Name: dihydroorotase, Class: EC3.5.2.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQSLTIRRP DDWHLHLRDG AMLAAVLPET ARHFARAIVM PNLVPPVVTG AQAAAYRDRI
61 LATLPKGMNF EPLMTLYLTE QTDPDDLAAA HTSGLITSVK LYPAGATTNS ASGVKDFDKV
121 RPVLERMAEI GCPLCVHGEV TDREIDIFDR EAVFIDRVLD PIRRATPGLR VIMEHITTKD
181 GADYVAANPE GLGATITVQH LMFDRNDMLV GGMRPHYYCL PILKRRHHRE ALVAAATSGD
241 ARYFLGTDSA PHPTHAKEAE CCAAGCFTAP IALSCLAHVF EEAGALDKLE GFTSLNGPAF
301 YGLPVNADTI TLSKADPLDI PKTLPAGEHT VTVFDPGVPL HWRVTR
SEQDB ID: 3101377EGT
Reference:
3101377
Name: orotate phosphoribosyltransferase, Class: EC2.4.2.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrE
Sequence:
1 MIPAAYPTRE EIARLTARML LEIGAVNFNT KEPYILASGL PSPSYIDCRK LISFPRIRST
61 LMDFLTVTVM RNAGFEAFDN IAGGETAGIP FAALVAERMA LPMTYVRKKP KGYGRNARIE
121 GAMSEGQRVL LVEDLTTDGG SKLSFVDAIR ETGASCGHTA VIFYYDIFPE TEKTLGDHGV
181 ALHYLCTWWD VLAEARAQKA FDEVTLSGVE AFLKDPRAWQ AANKR
SEQDB ID: 3101377EGU
Reference:
3101377
Name: replicative DNA helicase, Class: EC3.6.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaB
Sequence:
1 MNEITTIGQA SAEVQNADTM PHSVEAEQQL LGAILTNNDL YDRVAQIIGP EHFYDPVHAR
61 IWEVAAARIA KNTLASPVTL KSFMAEDAGL AELGGAAYLV NLAGASISAF AVRDYAQMIY
121 DLAIRRELIR LGRDISDKAA RVDVASEPKE QIVEAEQKLY KLSEQGQTDS GFKSFLKAVT
181 EAVNVTNQAY QRGGGMAGIS TGLNDLDKQL GGLHPSDLII LAGRPSMGKT SLATNIAFNV
241 AKAYKRGQRH DGTEGAIDGG VVGFFSLEMS AEQLAGRVLA EASEISSHKI RQGDMTEDEF
301 RRFVNAAKDL EACPLFIDDT PALPISQLAA RARRLKRTHG LDLLVIDYLQ LCRGMADNRV
361 NEIAEISMGM KAIAKELNIP VIALSQLSRQ VENRDDKRPQ LSDLRESGSI EQDADVVMFV
421 FREEYYKERE KPGDHELDRM EEWKTAMERL HGKAEVIVGK QRHGPIGTVE LSFEAQFTRF
481 GNLVKPWQQG GQIEQY
SEQDB ID: 3101377EGV
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTRLLEDAL ILLEEGNLTA AAARRNVTQP AFSRRIRSLE QWIGTDLLVR GANRVELSPA
61 LAKCEPQIRA LLSQLQQVQG QLKDPEGGAD VLHVVTQHSL SVSAIPELIR VANSAGTRWH
121 VRLHTRNQDE AMSMFLRHEV DVLVGYDYRV LPLAPFDSSV TRYVWRRDAF VPVVGGALRH
181 RLKDGNVLPP DTPRISYPKG SLFGQIVSHY NKDAALSLDG PVVVESTFSV GIAQLVLSGI
241 GAAWVPHSLI HDQIISGEVV ILSPGYGRIP MDIALYARTD NKRAILFRNA LAAPGA
SEQDB ID: 3101377EGW
Reference:
3101377
Name: ACC deaminase/D-Cys desulfhydrase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSMQIRHYS NRFLLSTLRK NMPIQGGIVK TFVDAPVSGA VDDQALLRRA LERFARIRLG
61 HLPSPLEPLD RLSEALGGPR IWVKRDDCTG LSSGGNKTRK LEFLMASACE AGADTIITQG
121 AIQSNHARQT AAAAARLGLH CHLLLEDRTG AADLAYTLNG NVLLDRLHGA TISRRAGGSD
181 MAAEMERLAA TLRGKGKRPY VIPGGGSNRV GALGYVNCAL ELSEQALSMG LDIDALIHAT
241 GSCGTQAGLV AGLAGLSWNT HLLGIGVRAP QERQEAMVFD LACETMDYLG MGIPIVRSGV
301 RANCDHVGPG YGLPTEAMCE AVRMLARLEG LLLDPVYTGK AMAGLIDLTR QGYFDGMANI
361 VFLHTGGSAA LFGYPEIFGL PGYQP
SEQDB ID: 3101377EGX
Reference:
3101377
Name: Glu/Asp ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltI
Sequence:
1 MNLLKPILAG AVALGLALPV AAQDRTGTLA KIDASGEIVI GHRESSVPFA YLDENQKPVG
61 YSIDLCMKIV EAVSAELGKE LSIKYVPVNP KTRIALMANG TIDLECGSTT NNLTRQEQVE
121 YLPTTFITGT KLMVRKGSGI SSVADLDGKA VALAQGTTNE RAVKAAIETM GLDVKVLPVR
181 DHAEGMLSLE TDRVDVYATD HILLFGLIAK SKTPDAFEVV GDFLSFDPYA LMVRRDDSAF
241 ELVGKKALAA VFRSGEIDAI YAKWFDPLGV GQTDLLKAAF QLNALPE
SEQDB ID: 3101377EGY
Reference:
3101377
Name: Glu/Asp ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltJ
Sequence:
1 MNYNWNWGVL FEEEYLGWLI SGVGWTFSVA LVAWVLALAV GILVGVGRTL PSRPVALLCT
61 TYVEIFRNVP LLVQLFLWYF VLPEIVPSDM GRWMKRDMPN PEYVTAVVGL GLYTASRVAE
121 QVRAGINAVG GGLTSAAYAN GLSTAQTYRY VLLPISFRLI VPPMTSEFLT IFKNSSLALT
181 IGLLELTAQS QQIAEYTFQG FEAFTAATVI YVVIALCATV IAQILERHTK IPGFVGKA
SEQDB ID: 3101377EH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQKYQLQTL ARFSSLVLVS SYFRGRRLAM KTLLTTLFSL SALAAALSIV ALFTAEAQIS
61 DYGVAAFFFA MTIALYLLAR WYLIRFGRIG LLKPKLFRRE PRGNALKAQT TISSAGWITD
121 SLSAVMRKRN GVDLDIHTLV RLEIAKIKEV GLHGKARTFE EILTETLLLR FVETDNRDRS
181 KPPISILRQV RDTKDFWRLR EMVDEHYAKS AAKGAAYRAW EDAVGDVDQS HLLKDGWIPF
241 LKSLPGPDIN LWHGVATDFH EISEDRLDAA FWIVEQDACD RTTASEFIMG FLQARMDIGI
301 YDPDGTRGRL PPDPRLERFV GVINLYNDGF YKFHSLNAGV FSAVNLEDQV ANDLLTNNEK
361 YTGLSGLPRP RKIVKEGEKP VHSGPRGYDS PYAYWDEAGL HLKYPGDDWQ KTG
SEQDB ID: 3101377EHA
Reference:
3101377
Name: Glu/Asp ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltK
Sequence:
1 MGDFDLSVII DNLPFLWQGL QLSLLLTFLA VVGGIVLGTL LALMRLSGIL PLSLLSAGYV
61 NLIRSVPLIL VIFWFYFLVP LALGRPIGGF YSALIAFVMF EAAYYSEIIR AGIQSVRQGQ
121 VHAGQATGLN YWQIQRYVVL PQAFRNMVPI LVTQGIILFQ DTSLVFVVSL RDFMTVSSIV
181 ARTEGRLAEM YVFAALVYFV ICFAGSLFVR RLQKAKTA
SEQDB ID: 3101377EHB
Reference:
3101377
Name: Glu/Asp ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltL
Sequence:
1 MIDIQNISKW YGTFQVLTDC TTSVTKGEVV VVCGPSGSGK STLIKCVNGL EPVQQGKITV
61 EDFEVTARGT NLTKLRARIG MVFQHFELYP HMSVRENLCL GQQKVLGRSR DEANAKAEAL
121 IDRVGLLPHI DKFPGQLSGG QQQRVAISRS LAMDPIAMLF DEPTSALDPE MINEVLDVMV
181 ELAREGMTMM VVTHEMGFAR KVADRVIFMD EGHIIEDRQT EAFFGNPESD RAKDFLSKIL
241 NH
SEQDB ID: 3101377EHC
Reference:
3101377
Name: Asp racemase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNGRLKLGI VGGLGARGGA DILNKLVAAT PVKSESDHRE ILFEQKPLSE PIPVSRPDYL
61 PTHRKFYVFD TLTRMEQNGC DAALLPCFIT HTFLEELAAE LPIELISIGD AIVAELARHH
121 GAARRIGVLT TPYVRRNGFF QRMLTADQQV LYPDAGTEAA LLEAIYGPGG FKAGRPLPEV
181 LPAIRRAVAA LLAQGAEVII PGMTELPVIF GAGDVIADAP ILDVNQIYAR FALAQTSGRR
241 PAVFKVGVVG GVGPAATVDF LKKIVEGTAA ERDQDHIKLI VEQNPQIPDR TENLVKGGPD
301 PTLALYATCK KLERAGAQAI AIPCNTAHAF VDRIQKNLDI PIISILTETA RFIGALHPEI
361 GKVAVLATSG TIQSGLYQSA LRDQGLDPVL PDAGMQEMVM EVIYGPSGVK AGFTTGRCAA
421 QLAQVIAAMT GQGAQAAILG CTELPLVHLP APAAIRLIDP TEVLARACVQ AAISARARDF
481 AGGMG
SEQDB ID: 3101377EHD
Reference:
3101377
Name: Asp ammonia-lyase, Class: EC4.3.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aspA
Sequence:
1 MDTTASRTEH DSIGACTIPQ GAPWGSQTQR AIENFPITGI PISHYPEIVV ALAQVKKACA
61 LTNAELGALT PDKAAVIASV CDRIIAGQHH EAFCVDVMQG GAGTSTNMNA NEVIANLGLI
121 VLGGSYGDYG HLHPNDDVNR SQSTNDVYPT AIRLATLSKA RVLSAALRDL VQAFHDKGDE
181 FAHINKVGRT QLQDAVPMTL GQEFHSFANT LAEDIDRITD LGRLLAEVNL GGTAIGTRIN
241 TPEGYGPLVV EKLADITGLA LSPARDLIEA SSDLGAFVMF SGALKRVAIK LSKICNDLRL
301 LSSGPRAGLG EIILPPAQAG SSIMPGKVNP VIPEVVNQIC YQAIGNDLTV TMAAEAGQLQ
361 LNAMEPVIFY KVMETMTTLT GGMNVLNNRC VRGIRADEKR CAELLGGSLV LATLLAPVIG
421 YDAAAKVSKR ARAEGITLRE ACLKQGLDAA LVDSLL
SEQDB ID: 3101377EHE
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPHMTATATW PPEDPIVSIR GVRKSFGTLE VLKGVDMDIM KGEVICIIGP SGSGKSTLIR
61 CINALNDIQE GSITVEGQEV HDPRLDKLEL RKKIGMVFQQ YNLFPHKTAL QNIMMAPVLV
121 MKENKAEVEN RARALLKKVR LEGKEDAYPG ELSGGQQQRV AIARSLAMQP DVMLFDEVTA
181 ALDPETVKEV LLTIKELAAE GMTCILVTHE MGFAREVADY IYFTDRGVIV EHGPPDSFFD
241 DAQDERTKLF LSQIL
SEQDB ID: 3101377EHF
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPVRVLAAV PVWIPFALFF LCALWPSLAL AQSGEAVRPF HALWRWAPFL ITKGFLFNIL
61 ISFLCLIIGT GVGVLLGLCQ ISLLRPVRRI SWFITQLFRN SPWLVILFIV MLALPFEVTI
121 FGKAYFVPAW IKAVVGLSLP IMANISEIVR GAIRSVPNTQ WEAAEALAFT RQQTMWRIIL
181 PQCFKRMIPP WMNWYAILTM ATPLVSILGV EEVMNLTRQA IVAEENRPEL LMPFYGFVLL
241 LFFAYCYPIA RLTLRLERKF AVKL
SEQDB ID: 3101377EHG
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPHLSRRRGA PISGPLMLDA FSEFFRQLAE DYPRWNFVFF YQPVQAGKIW TGLQYTVILS
61 LACLVFSVII GVVGAWLQGS KRRLLRNLVQ GYIQLFRNTP PFVQLLFFYF ALGQLTPTYS
121 PDGWLEVPII SNVGWAIISL SFFAGAFNVE IFRSGIEAVP DATIEASEAL GMTRLQTYSH
181 VILPLAFRVS LPALNNNLVN LIKTTTQAFA IAVPELLYQA VTIWNDYPSA QYPAMLLLFV
241 VYIGLVGIMV LGMNRWERHL AIPGYGN
SEQDB ID: 3101377EHH
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNNFVGGTTI AAMLMSTGAA MAEQCTNETW NKIAQRGTIV VGVKADTRPW GYRDQTGGII
61 GMEADMARQV ADTLGVALEL VAVESSNRMQ FLEGGRIDLM IATMSDRKDR REIVGIVGPN
121 YYSSGTNVMT PKALGVTAWS DLKNRPVCGK QGAFYNQIVE QRYGAQIIAF GSNAEALQAL
181 RDKKCIAWVY DDSSIAADLA SGHYDEFEMP LVSEDNNPWG LAVPIAERDC VFGRFMSGMQ
241 YSWHQSGELV ALEQKWGIQA TAYLAEQHAR FADWLAD
SEQDB ID: 3101377EHJ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELDWLEDFV ALSSAGVFAK AADARNISQS AFTRRIKNLE YWVGTPLFDR SVHPVTLTQA
61 GESFRPVALD MINTLNTARA EARGLARRED AVLDFAALHT LAISYFPRWL NRISGAIGPI
121 RTRVVAENFS GCVEAILSGS SDFMLCYHHH TVPMIADDAR YPSIRIAEDR MIAVSCPGLD
181 GQPRFTLDGT DTIPLLCYTR DSFLGKMTNQ IIDRAGLRAR CDFLYENSVG EALKSACVEG
241 LGIAWLPMAA VERELSEGRL IRVSTEAAEN PISIRLYRSM ERSRREVERF WSYASSL
SEQDB ID: 3101377EHK
Reference:
3101377
Name: oxidoreductase, Isotype: 2OG-Fe(II) oxygenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEFTHIPTI ALGTRPDAEI AAEFRAAYGS TGFGYVTDHG IDTTLTEALF EASRRFHALP
61 LATKMAIAVD RSHRGYIPIN SSTDVNSTLA TVTKPNQSAS FMMMREDAVA DPDEYLSGPN
121 RWPDLEGFRD TLERYSAAMS ALGRRLMAIA LDAAGVSDPS ILSAFDRPTL WLRLLHYPPQ
181 PPASPDDLYG SAPHTDFGCL TLLAQDGVGG LQVRTPAGHW VDVPHRPGAL VVNVGDMLHR
241 MSNGRLRSTP HRVINTSGRE RFSCPFFYDP HVSTVIEPLP GTGAPKYPPL VFGDFLRSEL
301 EAAYDAHKPA CAAANSP
SEQDB ID: 3101377EHL
Reference:
3101377
Name: Ala racemase, Class: EC5.1.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: alr
Sequence:
1 MNRGMSTAHL TIDLDALADN WQALNARTTA ETAAVVKADG YGLGAARVAA RLARAGARTF
61 FVAAAEEGAA VRKAVGPDPM IGVFSGHMEG DAGILRANRL TPMINSVDQM LRHVEQLPGH
121 RFGVQLDTGM NRLGLEPEDW AQLREIALRQ NPALVMSHLA CADEPGHDMN RKQLRLFKEM
181 TDGIKAPRSL AATGGILLGP DYHFDLCRPG VGLYGGEPFD EAKAVVTLDL PVIQVRDLAE
241 GETVGYGNSW TAPRACRIAT VAAGYADGLH RAMGRGITLF AGKTACPVVG RISMDLITVD
301 VSGLDHEPAS LQLLNRLQTV DDLAEAAGTI GYEILTSMGR RYRRSYVSCS ASADRAVESI
361 RDKLRRRPDL LPQSLAE
SEQDB ID: 3101377EHM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPLALLARL GRLALSVLAS FGRVTLFALD AVSHILRPPY YPRELAIALL NIGWLSLPVV
61 GLTAIFTGGA LALQIYAGGA RFNAEAVVPQ IVAIGMVREL GPVLVGLMIA ARVTSSIAAE
121 IATMKVTEQI DALVTLSTHP MKYLTAPRVL AALITVPLLV GIGDIIGIMG GYTVAVQNLG
181 FNAAAYLQNT VDFLETRDVV SSLVKGAVFG VIAALMGCYY GMNSGRGAQG VGRATKGSVE
241 AAAVLILAAN FVLTGVFFSI
SEQDB ID: 3101377EHN
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRMENVHKA FGPNRVLQGM NLEVPRGTSM VIIGGSGTGK SVALKCVLGL IRPDSGKIYV
61 DGKDAADTGD RDAFLARFGM LFQGGALFDS LPVWQNVAFR LLRGSLKRPT DEAREIAIEK
121 LRRVGLKPDV ADRLPAELSG GMQKRVGLAR AIAAEPEIIF FDEPTTGLDP IMAGVINELI
181 REIVTEMGAT AMTITHDMTS VRAIADNVAM LHGGVIQWTG PVAQMDDSGD PYLDQFIHGR
241 AEGPIEAVR
SEQDB ID: 3101377EHP
Reference:
3101377
Name: paraquat-inducible protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGPAENSTN FPGHRLKSPL PLRLATLSLL ILYPVAWFAP LMRAGLLPIF GLSEISVITG
61 LQSLWASDVA LALIVTAFAL FAPYLKTIGT ALIQWNLLDP RAQPALHILG KLAMADIFLI
121 ALYITLAKGI SYATIEAAWG LYLFTACILA SIALGLLTER QIRKATR
SEQDB ID: 3101377EHQ
Reference:
3101377
Name: DNA repair protein, Isotype: RadA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: radA
Sequence:
1 MAKPSFSCSA CGASFTKWSG RCEGCGDWNT ISQDAGLSAG PAKKSLGAKR GRAVTLTDLA
61 SEEAPPPRAM SGIGELDRVL GGGLVPASAI LVGGDPGIGK STLLLQAVAA FARKGLKTLY
121 VSGEEASAQV RMRARRLGLA DAPVQLAAET NLRDILTTLE AEKPGLVIID SIQTMWADNV
181 DSAPGSVSQV RASAHELTTF AKRTGISVIM VGHVTKDGQI AGPRVVEHMV DTVLYFEGER
241 GHQFRILRSV KNRFGAADEI GVFEMTGAGL AEVTNPSALF LSERGAPSPG SVVFAGIEGT
301 RPVLVELQAL VAPSPHSQPR RTVVGWDGGR LAMILAVLEA RCGIPFAGLD VYLNVAGGLK
361 ISEPAADLAV AAALLSARED RALPGDTVIF GEISLSGALR PASQTENRLK EAQKLGFTSA
421 IAPAGGKTGT LEGLTMTRPT DLVGFVGEFF GAG
SEQDB ID: 3101377EHR
Reference:
3101377
Name: CvpA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEGFTIIDGV VALIIVLSAL LAYARGFVRE AMAIAGWIAA AVLAFLFAPK AMPLIRELPV
61 VGEFLTDSCE LSVIAAFAAV FALALVVVSF FTPLFSSLVQ RSALGGLDQA LGFIFGVARG
121 VLLVAIAFFV YDTVMTGQNF TIVDESRSAQ VFARMTGKIE EQNPEAALGW VTQQYEGLVG
181 TCAQ
SEQDB ID: 3101377EHT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLSHETAFA RFTAVTATMA PPAPGLPAGT MLETEAGWSP VEEIRPGTRV ATIDGGFCQV
61 IAAHAVPPAP APLWRIPGGT LGTCSDLLLP EGHFLALNGP DCRHLFGLPT VLAPVAALAG
121 FEGIHRLPAR PLPAHSLRFA EEEVVWAQTG ARILMPGEAP GRHFQRLDYG QTRALLMLRS
181 GGNLAPDLAA
SEQDB ID: 3101377EHU
Reference:
3101377
Name: amidophosphoribosyltransferase, Class: EC2.4.2.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purF
Sequence:
1 MPAPRFPIAH PFDDDKLREE CGIFGVIGVQ DAASFVALGL HALQHRGQEA GGIVTHDPEQ
61 GFNSARRFGY VRDNFTSQSV METLPGPLGI GHVRYSTAGS KGQTQIRDVQ PFFGEFAMGG
121 AAIAHNGNIT NANALRRELI ERGSIFQSSS DSECIIHLMA RSLQRTIPER MEDALRRVEG
181 AFSVVAMTRT KLIGVRDPLG VRPLVLGKVG DGWILSSETC ALDIIGAEFI REIEPGEMVV
241 ITAEDGVQSH FPFRPQPSKF CIFEHVYFSR PDSILGGRSV YETREAIGRE LAKESPVEAD
301 LVCPVPDSGT PAAIGFSLES GIPYAMGIIR NQYMGRTFIE PTEQIRNMGV RLKLNVNRAL
361 IRGKRVILVD DSVVRGTTSR KIKDMILDAG AKEVHFRIAS PPTAWPCFYG VDTPEREKLL
421 AATMSEDEMR THLGVDSLKF ISLNGLYRAV GETNGRDNAC PQYCDACFSG EYPVRPSDMI
481 EKGFSLKAAE
SEQDB ID: 3101377EHV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANGIVEEAA TQAAKIRANG LTVLGVFGPK DDLRALVRLP GGKIEEVSPG DRTRAGEVMG
61 IDAEGLMLRH GGQTRRIGIA GG
SEQDB ID: 3101377EHW
Reference:
3101377
Name: short-chain oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQETKLALI TGASRGLGAA LAEALAPTHH IVAVARTSGA LEELDDRIKA CGGSATLAPM
61 DITDPAAMAT LCRGIHDRWG QLDLWLHTAI HAAPLSPAVF VDPKDWSKSV AVNATATSVL
121 IPYVAPLLGE TGQAVFFDDP KAGAKFYGAY GASKAAQMSL ARSWAAETER TGPRVTIVKP
181 APMATALRAR FHPGEDRAAL TPCSDEAARI VALL
SEQDB ID: 3101377EHX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEDALNRIA DALERMAPAP LRAPDFAVAP AFVWHVAPER LEPVRDVNRV DLDLLVGINR
61 ARDTLLDNTR RFAAGHGANN ALLWGARGMG KSSLVKAVHG ALQPEFPNLK LVELQREDLP
121 SVARLLNHLR AAPERFILFC DDLSFSHDDQ HYKSLKAVLD GGIEGRPENV VFYATSNRRH
181 LMPRDMIENE RSSAINPSEA VEEKVSLSDR FGLWLGFHPC DQDEYLAMID GYCAAYGVSV
241 APDTLRAEAI EWQATRGARS GRVAWQFFTD LAGRQGIALR
SEQDB ID: 3101377EHY
Reference:
3101377
Name: twin-Arg translocation protein, Isotype: TatC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tatC
Sequence:
1 MSKTDEIDDT SAPLIEHLAE LRTRLIRAVL AFIVGIVLAF TVAEPILQFL LAPIEATLRD
61 LGDPSPTLQY TSPQEYLFTL FRISMVFGFA LSFPVIGYQL WRFVAPGLYR SEKGAFLPFL
121 VASPFMFLLG ASFAQFVVTP LAMQFFLGFA DVSSIFANLL TGGGGTVPSD VAVVPETTDG
181 VKITFFGKVN ESLDITLKFI MAFGLCFQLP VLLTLMGKAG LVSAEGLGSV RKYAMVAILT
241 LAALVTPPDV VTQVILFVVV YGLYEVSIFL VARVEKKREA QLRAEGYYDD EEAFDDPLMA
301 EFDAEEAEER KE
SEQDB ID: 3101377EJ
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYVAQSNSRK KEKEPSNLRS KESVLDSIDA AILRELCADA RIPRAELSRR VGLSAPSVGD
61 RVRRLEDIGI ITGYGARIDP ARLGYGLTIL IRARPLPGEM ANMIEAIQDT PQIVACDRVS
121 GEDCFVARAH VRDVAEMEAV IDRIVPFGAT NSSIVQSSPV EERLVEL
SEQDB ID: 3101377EJA
Reference:
3101377
Name: twin-Arg translocation protein, Isotype: TatB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tatB
Sequence:
1 MFDLGWSELL VIGVVALIVV GPKDLPVLFR NVGRWVGKAR GLAREFSRAM NDAADEAGVK
61 DISKGLKAAT NPVDAALDGV RKAATDFKTD LDPTKYNPDS ETGKLAAERA EQAKKIQAAT
121 ARVAAERRLR EATAELEKAK DAEAALKPGP ET
SEQDB ID: 3101377EJB
Reference:
3101377
Name: twin-Arg translocation protein, Isotype: TatA/E family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNNIGLPGL LLIAVVVLVL FGRGKISSLM GEVGKGITAF KKGVSDGSKE LEEDVAQTAK
61 DVTPEADKDK A
SEQDB ID: 3101377EJC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRTAEIVTF ALAPGVTQEA FVALSKDTET FVRALPGFVD RKLSQGADGR WTDYVIWTDA
61 NAAAAAAKAF ETAECAAALM GAIAPDSVSM RHETVLWRM
SEQDB ID: 3101377EJD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRTDRLFDI IQILRDGKLH RARDIAARLE VSVRTIYRDM DTLVASGVPV EGERGVGYMV
61 REQITLPPLN LTPEELEALN LGMAIVAEAA DPELKAAAQR LAEKIDAVLP TQTIAEADAW
121 KFAVYPFADA ARGLAHMAPI RAAIKARQKL RLVYRRIDGE LTERTIRPLH MEYWGRVWTV
181 TAWCELRAGF RVFRIDLIET LTPLPELFRD EPGKTLADYQ P
SEQDB ID: 3101377EJE
Reference:
3101377
Name: LysM domain/M23/M37 peptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVLFRTLPR PLMGLSALAL LAACEAPLDY DLRGQIGAFN TTEAAQSART AARPKPDERG
61 VISYPNYQVA VAKRGDTVAT LSDRVGLPVG EVARFNGLQP TDGLREGEVL ALPRRVTEPV
121 GQGNNVDIAS LAGSAIDQAP DTTPVQTTAL EPAKPAASPA PKPAAPEPVR HKVERGETAY
181 TISRLYQVPV KALGEWNGLG PDFTIREGQY LLIPVKDQPA PKSAAKPAAA TTTTAAVSAP
241 GAGSATPTPP SATKPLPEEK VPAAKPAEPD VSVGQPTASS NARLGFPVKG KIVRPYSKGK
301 NDGIDIAGAP GSAVSAAEAG TVAAITADAD QVPIVVIRHA DNLLTVYANV DGIEVNKGDT
361 VSRGQKIARL RGGDNAYVHF EVRKGFDSFD PEPYLK
SEQDB ID: 3101377EJF
Reference:
3101377
Name: protein-L-isoAsp O-methyltransferase, Class: EC2.1.1.77
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcm-2
Sequence:
1 MSGPDPETKM QFLFALRSKG VTDKRVLAAM EEVDRGLFVR GLFSGRAYED MPLPIACGQT
61 ISQPSVVGLM TQALEVNPRD KVLEVGTGSG YQAAILAKLA RRVYTVDRHA RLVRAAQLVF
121 QQLQLVNITT MTADGSFGLP DQAPFDRIIV TAAAEDAPGP LLAQLKIGGI MVLPVGQSDT
181 VQTLIRVRRT EQGFDYDELR PVRFVPLLEG LGKDG
SEQDB ID: 3101377EJG
Reference:
3101377
Name: acid phosphatase, Isotype: SurE, Class: EC3.1.3.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: surE
Sequence:
1 MRILITNDDG INAPGLAALE QVALELAGPG GEVWTVAPAF EQSGVGHCIS YTHPMLIARM
61 GERRFAAEGS PADCVLAGLH DVMKDAPPDL VLSGVNRGNN SAENALYSGT LGGAMEAALQ
121 GLRAIALSQF FGPRNYGRTD PFEIAQSHGV QVIRRILDTW PQERPDYRLF YNVNFPPVPA
181 AEVKGLRAVR QGFREGTRFS AEPHLSPSGK RFLWIKGGDQ QQRTAPGTDA AANLDGYVSV
241 TPMRADLTAD DALEALQATL
SEQDB ID: 3101377EJH
Reference:
3101377
Name: Fe ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAGQTPPRL EIRNLVRVFD GRRVVDDVSL HIRAGQVTCL LGPSGCGKST TLRMIAGVEM
61 QDSGEIYVDG KLICDTVFRV PPERREIGLM FQDFALFPHL SVAGNVAFGL KGSREEKRAR
121 VEELLARVSL GGHIDSYPHQ LSGGEQQRVA LARALAPRPR IMLMDEPFSG LDNRLRDGIR
181 DDTLALLKEE DAAVLLVTHE PEEAMRMADE IALMRGGRIV QQGAPYNVYT RPADRAAVAF
241 FSDINVLRAN VTGALAQTPF GQFLAPGFPD NTEVDIVFRP QHVKLDFDRG GKGPLPTPSD
301 GVAARGVVER ARFLGSESLV EFRMDFDGSL LKATVPNVFI PETGRVMWLT IRRDRCFVFP
361 ADRKR
SEQDB ID: 3101377EJJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNHEAVQNYY GEVLQSSADL QTNACCTPDA VPAHLKPVLG KLHDEVMARY YGCGLIAPLA
61 LEGARILDLG CGAGRDVYAL SALVGESGAV VGVDMTPAQL EVAQAHRAYH AEVFGHAAPN
121 TEFHQGYIEK LDDLPLKPGS FDIIVSNCVL NLATDKAAVL RGAQRLLKPG GEMYFSDVYA
181 DRRIPEALAR DEVLYGECLS GALYWNDFLS LARGAGFGDP RMVESRLLTI ENPELERRVG
241 PIRFLSATYR LFNLAGLEPD CEDYGQAVIY KGTVPHAPHE FVLDDHHVIE TGKVFPVCGN
301 SWRMLAESRF APHFQFIGDF STHYGIFAGC GGASPFNGLS PVAPAASGGC C
SEQDB ID: 3101377EJK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQGFSLKDQ LFNADKVAYL AGLFDGPGFD APGFQARVMA RLHELELKAR IDWIATCLAE
61 AVPGALPEVA PVILRALPPP LDPTLSDDDF GDFIFAPLGE WVAAVGIEDP EPALDLLAEL
121 TQRFSMEWAI RPFLNRWPDQ VLAQMERWCD HDSYHVRRLV SEGTRPRLPW GLGVSLDVDA
181 ALPLLDRLHG DPTRYVTRSV ANHLNDIAKK APDLVLTRLG GWREEGRQRP EELSWMTGHA
241 LRGLVKAGHP GAMAALGYDP DVALDVQLSL PGEARIGDAV EIGVTLSGAR DVPVLVDYIL
301 HFQRPGGKVS AKVHKLKQAR LSGGRLQLSK RHKLKGDAST FTLVPGPHRV EVQVNGRVRA
361 AGSFDLLG
SEQDB ID: 3101377EJL
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLGISGKRA LVCASSKGLG LGCAEALAAA GVDLVMNARG AEALEAAAES IRRVHGVAVT
61 TVACDVTTEE GQAQVIEAAR GVDILVTNAG GPPPGLWSDW DRGDFIRALD ANMLTPIAFM
121 KALLPGMIDK GWGRVVNITS QSVRAPIPAL GLSNAARTGL TGYVAGTSRQ VAPHGVTINN
181 LLPGIHATDR ANALDGPVAE QKGISLDAAR AERAATIPAR RYGTPAEFGA ACAFLCSQHA
241 GFIVGQNLLL DGGGTNLTM
SEQDB ID: 3101377EJM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRYAPTQSV PVYRAEDFPV TSGANLGDGI SPMDELMLDD VYGMAPGARS WRLGLETMDN
61 GAFRIAGDTE LGQPGAELHL DCALSLMSPD GQTTDAIVLV ELDETGHIAD LYLLPLAPLV
121 PKTDYTLVGM DRARARQKFA QVACVSFTRG THITLGSGAQ VRIEDLKVGD RVLTRDDGVR
181 EVRWIGQTTV RAVGDFAPIV IRAGTLNNEN DLVVSPDHRL FVYQRRDEMG VGQPELLLKA
241 RHLVNGDTVF VQEGGFVDYF QLLFDRHHII YAEGIAAETM LLDPRTRPAL PQEMLEQVSP
301 LLDQHGSGDS HGMDVAKALL DRPDVIDLLK RASTKR
SEQDB ID: 3101377EJN
Reference:
3101377
Name: cytochrome c'
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLRPLPLVV ALLSASAALA HSGVSNPAVK ARMHTMMQIA DNTKVLGDMA KGKTAFDAEA
61 ARAAAAAIAA HSASVTALFS AEEQDPKSEA LPAIWQDFET FSRKSEALTL AAAEAAGSIQ
121 SEADLKPALA GIGGACKSCH MDFRKPQ
SEQDB ID: 3101377EJP
Reference:
3101377
Name: peptide chain release factor, Isotype: 3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDIASNRPA LPPEIARRRT FAIISHPDAG KTTLTEKFLL FGGAIQMAGQ VRAKGEARRT
61 RSDFMQMEKD RGISVSASAM SFDYKTFRFN LVDTPGHSDF SEDTYRTLTA VDAAVMVIDG
121 AKGVESQTQK LFEVCRLRDL PILTFCNKMD RESRDTFEII DEIQEMLAID VTPASWPIGQ
181 GRDFIGCYDI LRDRLELMDR ADRNKVAESI EINGLDDPKL AQHVPAHLLE QLHEELEMAR
241 ALLPELDPQA VLEGHMTPIW FGSAINSFGV KELMDGIGSY GPEPQIQSAE PRKISPEETK
301 VSGFVFKVQA NMDPKHRDRV AFVRMASGHF KRGMKLTHVR TKKPMAVSNP VLFLASDREL
361 ADEAWAGDII GIPNHGQLRI GDTLTEGEAL RVTGIPSFAP ELLQGVRAGD PMKAKHLEKA
421 LMQFAEEGAA KVFKPMIGSG FIVGVVGALQ FEVLASRIEL EYGLPVRFDG SQFTSARWVA
481 GDKAALDKFI NANKQHIAHD HDGDTVYLTR LQWDIDRVIR DYPELKLTAT KEMMV
SEQDB ID: 3101377EJQ
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVRIPNPDL AVDDSNKQRW NRPAHRRHGF HNAHRLFRRA LMVRSRNVLP LAPSPIDLPA
61 ALPELRALLA HPAFSAFCCL RGDALIFEAA AEDFSPTAPH SIQSVTKLHI HLIFGQLLAQ
121 GLVSLDAPVS DYLPDIGSGY ADAPVWALLN MAVHNDFSED YSDPLSNCYT EEIALGWRLP
181 PEGMPEPSLT QFAAGITGFR PGPPPAFAEY KSANTDVLTL IAAAVSPLPL TRLVEEIADA
241 AGYEGAFHIS LSPEQLPAFS GGGCLSARDL ARFGLLFAGL SGDRAYPNAD FLRSCLGRAA
301 PSLSPPRDWL RYCGHLMTDG RLLGHAGYGG QFLLVDSETG TSCALLSVLE NDAGYDVDYM
361 SQVADCLRRV CRYLA
SEQDB ID: 3101377EJR
Reference:
3101377
Name: acyl-CoA synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPAQRENFR RLLTPRHIAF VGGRDAAIAI REARRRGFAG RMWAVNPKRD VLEGVACVPT
61 IADLPEAPDA VYLAIPAAAV TGALGQLSAM GVGGVVCFSA GFKETGDAAA ERALIAAAGD
121 MALIGPNCYG LINYVGNSAL WSFEHGGWSP GYGAAIITQS GMFSSDITMS QRSLPMAYMV
181 SAGNQAVLGL EDFLDAFASD PVVRAIGLHI EGLQDVARFE RTALRALERG VPVVALKSGS
241 SRIGAALTIS HTGSLSGANE LYEALFARCG VISVSNPSQF LETLKLLCVT GAPRGARVAG
301 FTCSGGGATM LADHAERIGL SFPAVEGAHR TELKALLPEI ATVSNPLDYT TPIWGQGEHT
361 YPVFSRTLEA VTPDFTVLVQ DYPAAGLDES KVFYLNDAGA FARAATEQQV PAAILATIPE
421 NMDAETRQML IEQGVAPMQG IHEALNAIRD AAGWSAARAR ILSAKPAPLL PPLVPANLVG
481 QTEDIGKDWL RGAGCAVPEG RSVTAREVES AAAEIGFPVA LKMMSPRLAH KTEAGAVALN
541 VADQSELRAA LAQMPGAVAA YDPDALTDRF LVEAMSPPPL AELILTLRRD PQFGHALVLG
601 SGGVLVELLG DAVTLLLPCS VADVQRGLEG LRLAPLLGGY RGRPAADLAR IADDIYALTR
661 AYLQDCAEIA EVEINPLFVY PDRVVAIDVL LHRVAGQ
SEQDB ID: 3101377EJT
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMETSHEHE LLTATVRKFV DTEMMPHEDE VDRLGQVPEE IGRQIEARAH ELGLFACNLP
61 EEVGGGGLDL SAQRIIEQEF GKTTHALHSW AARPTEILLA CEGDQREKYL LPCVRGEKRE
121 LFALTEPDAG SDAMGMKSNA RRDGDDWILN GSKHFISGPC MPDFAIVFAA TGADDTPRGP
181 RKRVTAFLVD VGTPGFVCRE GTRSVSYRGY KTFELHFDNV RLGPGQILGE EGRGFEIAGQ
241 WLGMGRIWVG ASCCGKAERI LDMATEWAAN RRQFGQPIGS FQATGFRLAD GAMNLRAANL
301 MVTDAVARHR AGRMADQDAA MVKVFCSEML GRIADDAVQI FGGMGLMEEL PVQRLWRDSR
361 LERIWDGTSE IQRHIITRSM LRPLGA
SEQDB ID: 3101377EJU
Reference:
3101377
Name: opine/polyamine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPGLFSLFN RAGAWVLLLF LVTPALIAIP VSLTPKRFLS MPSDELSLRH FQNLFTSEEW
61 LSSFFQSGVI ALSTSVLATF LGTLCAIGLW RVSSKYSELV RAFLLLPLII PQIISAMAFY
121 RLWIPLGLLD SYPGLILAHT ILAAPMVLIT VSASLATFDP RLEQASKNLG ASNWTTMRRV
181 ILPSIRPGVF AGALFAFILS WDEIVVTLFI SKFSVYTLPR RMWNGIRENT DPTVAAAAVV
241 LIAITIIAFV VSAILSRRNA GQSRS
SEQDB ID: 3101377EJV
Reference:
3101377
Name: opine/polyamine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVGAALRNTD MNAVARHIHP GWAIIAPLLV LVVALYLGPI LNIMWLSVTD PEPGLGNYRM
61 LYESDSLLRI VWTTLRICVI TTVFSVTLGY SIAYAMVHCH QRQKNYMLTL LLVSFWISIL
121 VRTFSWLMLL GRSGLINNTL ETLGLVSAPI AFMRNELGVL IGMVHYMIPY AVLPLLVSMQ
181 SLDSRVMDAS RNLGASGSQT FWRIYLPLTL PGIVASTLLV FILSLGFYVT PAVLGGGKVL
241 MVAEYISVQL LVTLKWGTAA MLAALMLAGV LAMLWIMSRF MKLSAVFGGS TR
SEQDB ID: 3101377EJW
Reference:
3101377
Name: opine/polyamine ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDKQFMKEM LTESAHAYKE GRMDRRTFLA LCGASGIAMN AVLAGDAQAA ADHVVMWNWG
61 GQSVECHGSA IGEAFTAATG KGVKFDTSGP LEGKIKEMVD SGNVTADVAD ADLFNAVSLG
121 PTGHLEPIDY SIVSKDKTLP GYALEHGVSV ILYGYAFVYD TEAYGDNPPK DWKDFFDTAN
181 FPGTRSLYKW ANGSLEAALM ADGVAGDALY PLDMERALNK IKSIKDDSIY WGSGSEVHSM
241 VVNGEVTMAM IWQNRGRNIE NDTDGRFKLV NNQAMAMPGA YIVPKGNPAG REAVMQFIAT
301 AQEVPAQLML LDCLGMTPSN PAAFGEIPED QQPYAITSAM NIDKIVYNDP TWWGENGGDA
361 VNAFLEAIS
SEQDB ID: 3101377EJX
Reference:
3101377
Name: opine/polyamine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEAFSGGSL RIAGVSKYFG TFRAVNAVDL EIRKGEFLTL LGPSGSGKTT LLMMIAGFLD
61 ITSGDIALDG SSIANVPAEK RNFGMVFQGY ALFPHMTVRD NIGYALSVRK RPEAEIRTRV
121 DEMLELVQLQ DFANRKPGQL SGGQQQRVAL ARALCFAPPV LLLDEPLGAL DKKLRVEVQE
181 QLKDIHRRVG TTFIYVTHDQ EEALSMSDRI VIMRDGAIEQ VGSPQELYER PATRFAASFL
241 GKSNFVQQNG QTYALRPEKI DIHLGTGHPQ ARRKGTITSI TYFGSMQRII VETTEAEQIE
301 VDIDVWRNQQ PLHEGETVEL SWQDAAAVDL KES
SEQDB ID: 3101377EJY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNNEVVLTCA VTGAGDTTGK SPHVPVTPKA IAEAAIEAAR AGAAIVHLHA RDPETGQGSR
61 DPKLFKEIVD RVRDSGTDVV INLTAGMGGD WISDPANPAM PGPGTDMIGP EARLAHVEEC
121 RPDICSLDCG TLNFSDTDMI YISTPPTLRR MAALVQEWGV KPELEVFDLG HIRFAKAMIA
181 EGLIDAPPMF QLCLGIPWGA DQDVETMVAM KSQLPEGASW ASFGIGRGQM PMAAAAVALG
241 GNVRVGLEDN IYLDRGVLAT NGQLVTRARE IIERMGARLL TPKEARAKLN LRGAEG
SEQDB ID: 3101377EK
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNQARTNSA SAPGTMSRMS EAVPPHAWFG VSAVFHYLGP AFAVLLFPVV GVLGVAWFRI
61 ASAALIFAPI TKPWRTFKTS TPRERLLLLA LGGCLAVMNS SFYLALDRLP ISLVAAIEFM
121 GTIGIALWGL RTGRNYLAFA LAIIGVALLI DVASLRAMDG PDPTSDLLGL FWALLNGSLF
181 VLYIILGHKI SEGGASGGVE RLGAAMTAAF IFVMPLGFLQ ALEAFGAPLL VLAGIGVGIC
241 SSVIPYVCDQ LAMARLPRAS FAFLLALLPA TATIIGAVVL RQIPSAMDVL GVALVMIGVA
301 VHKPAPMASR AAAEMGSAS
SEQDB ID: 3101377EKA
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLDLLPPQD RGQVHSVFVV VPRFNLTTLI TMIETMRIGN YLSSERLFSW EVTSFDGLNL
61 GASNGVRVHL DVEPDQTAPA DQVFVLASWG GEHYQNKALA SWLRKRARQG ERICAVELGC
121 YLVARAGLMD GKEATTHWSW INGFQEKFDQ ISVVEQLFTI DGRILTCAGG MAGVDLMLRL
181 IEQSHGAGFS GEIADQMLHN PIRKGSSSQR RTMGRGTESI LPLVRQAMTL IERNIEEPLT
241 VPQIAAALDV SQRQLERQFK KHVGCTVVQF GLLRRLQNAR VLLIATELSV REIATASGFN
301 TLSHFSYSFS KFFGRRPSDY REAWPSNEAA PTWPGTLSDF LHAINSGDKR SKAPLAPREG
361 H
SEQDB ID: 3101377EKB
Reference:
3101377
Name: 3-hydroxyacyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKYPDPTSIT RVTSIGGGPI GGGWAAHFLA RGYDVTSYLH DRAEEGAFRT ILDTAWISLT
61 ALGLAPGASL DRLRVVHDLD AAVAGAGFIQ ESAPENLAMK QALYHRLGRI VPENVVIGSS
121 TSGLMMTDIQ ANCETPGRTV IGHPFNPPYL LPLVEIVGGE RTDPAAVEWA GEFYRVAGKA
181 PLMMKKEIPG FVATRLQEAL WREALHMVAN GEATPEDIDI ALMNGPAPRM VSQGQCMAFH
241 VACGAGGMAT NLDQFGPALK LPWTRLEAPE LTQELRDRMV DGCNAVAGDR HFADMAAQRD
301 REIVAVLNAL RAAREAP
SEQDB ID: 3101377EKC
Reference:
3101377
Name: carnitinyl-CoA dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: caiD-1
Sequence:
1 MMEVPPMSEG VSTRRDGHVL EVTLSRGKVN AIDVPTSQAL AAAFQELHED KELRCAILTG
61 GGDKIFSAGW DLKALNAGEM QLDNWWESDD YGFGGFTGLT ENWALNKPVI AAINGLAIGG
121 GFEMAMACDL LIAADHVEFG LPEMPLGIVP DAGALQRLPR RIPHNIAMEM FLLGRRMSAT
181 EAAHYGLVNK VVPKEQLMDA AREWAASIAW SAPLAMQSVK EVQREIECVP LEQAFHKMRT
241 DPMPTYRKML KSDDAAEGVA AFVEKREPRF KGE
SEQDB ID: 3101377EKD
Reference:
3101377
Name: bacterial luciferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKFQLAINLE RIDDSLDMND VARHTLEMVQ MAEEGGFEIV WAAEHHAIEM TIAPNPFQIL
61 TWWAGETSKI RLGTAVATAA YWHPINLAGE AAFLDLISGG RLEFGIGSGA YQREFDRMKP
121 GLKQSDAWRY MQEMLPAVRA LWQGDYAHDG EFWQFPTSTS VPKPVQADMP VWVAARSPIT
181 YDYAVRNRCH INCWPLTRPF AEAELYKRQL DEAIAKADNG WSPRFALMRH ACIYDNAADR
241 QQALDAIRRL LSQFENLFRN AGDVVNGFPA ALPLDQIAGR EQYDPEMLEE NLMFGSPETA
301 IGKLKRYEDL GVNEFIYYAS MGLDHDAQKR SLRMFCDEVM PEFR
SEQDB ID: 3101377EKE
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADIQSYRML IDGAWVDASD GALFDSTNPA DGKVWCRIPE ATEADVNRAV EAAHRAFTSG
61 PWARMTPTER GKLLRRLGDL LADRSEELGR IESVDTGKML KETRWQAKYI AEFIHFFAGC
121 ADKVSGETLP IDKPDMFVFT KREPLGVVAA VVPWNSQLFL VAVKIGPALA AGNTVVLKAS
181 EHASAAMLEF GKLIEEAGFP PGVVNIVTGH GEPCGRALTG HPLVARVSFT GGPNAARHVL
241 ENAKRNFAEV SLELGGKSPF IVFEDANIES AVNASIAGIF GATGQSCVAG SRLYLHEDIA
301 EEFLDRMVTQ ARAIVIGDPL AEETQMGPLC TDGQLAHIQR EVAHAQAEGG TVLTGGKQPE
361 GLGGLFYEPT IIDCPRQDLR IVDTELFGPV LSVQRFRTEE EVLALANDSE HGLAAGIFTR
421 DSARSLRMAG AVRAGIVWVN TYRVVSPIAE FGGIKGSGYG RESGFQAIYD YTRPKTVWMN
481 TSDEPMANPF VMR
SEQDB ID: 3101377EKF
Reference:
3101377
Name: endo-RNase L-PSP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSSKKQVIG GPLEIGGRVL SLSRAIRAGD FVFLTGQIPM RDGVPITTGS VEEQTRAVLD
61 DITATLALAG CTRDDVVKAM VWLRARSDFP GFNAVYGEYF PHDPPTRSAV VSDLLVDVRV
121 EVEVMAYKPL GGEG
SEQDB ID: 3101377EKG
Reference:
3101377
Name: 3-oxoadipate enol-lactonase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIAPDGSTY EIAGPVDAPC VVLVHGLGLN RACWQWTSPA LTDGYRVLSY DLYGHGDSVD
61 PPEPPSLSLF SRQLQGLLDH CGIADAVIVG FSLGGMIARR FAQDCPDRAR ALALLHSPHQ
121 RSAQAQAAIL ARVEQARDQG PQSTVEAALE RWFTEGFRRA NPAMMETVRG WVTANRKEVY
181 HRIYRVLAEG IDEITAPVPP LSCPALVITG DEDYGNGPEM TRAIAAEIAG AQALILPGLR
241 HMALAEDPGA INTPLRRFLD SLPKGVTK
SEQDB ID: 3101377EKH
Reference:
3101377
Name: CaiB/BaiF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSTLLKGIR VLDLSRMLSG PYCSMFLADH GAEVIKIEGG SGDTSRNNGP YRADDPGHDW
61 AGYFVSLNRG KKSIRLDLKS LEGKAAFRRL ATTADVVLEN FRPGVMDRLD LSYESLAEAN
121 PRLVYAAIRG FGDPRTGASP YADWPSYDVV AQAMGGLMAM TGPDADTPTK VGPGIGDIFA
181 GMMMSFGILA ALREAEATGK GRFVDVAMYD AMISMCERMV YLHDMTGQVP GPEGNGHPLL
241 APFGVFPAAD GQVALGIVDD SFWQKLTAIM NLPDLGSDAR FSSRAGRSAN AGEINRVVSG
301 WTATRSKAEL TALLGGQVPF GPLNTVADIA ADPHVAARQM LARIPHPEPG HAPWTVAANP
361 LRFAGQVAPP LPAPPRLGEH DALLDTLADS APLDEDARRD LRRAFGQFAT GVTVLTTRQE
421 DGTPRGFTAN SFTSVSLDPP LLLVCLAKTA HSCDVFAQAP HFAVNILSDA QKEISGLFAS
481 RSTEKFAGTH WHPGPHELPL INRALATFAC ARHKLVDAGD HLILIGRVLN HAVTEGKPLG
541 FHNGAYFDLG LENRLADAAT KDANGIIAAV LADGARILLE VTPDGTLTVP KAPPRDNTVA
601 GFLRHMDSRG LTARLDHLYA VFQNSQTGAH SIVYHGTVSG TAPPGMRYHD LAALPLDQVA
661 NDTERSLLAR YQREYRHGSF GIYHGTERSG IVHSIADHTE YTV
SEQDB ID: 3101377EKJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLPELRKVVT FDEDIHTEGG RAADPVLRMI GVAAVVTNPW AGRGFVEDLS PEIRRMAPVL
61 GKMLTDRLIA LAGSGDAIEA YGKACISGTD CEIEHASALI HTLQFGNFYR EAVGAKSYLG
121 FTNTRGPANT QIQIPLMDKH DTGRRSHYLT VQFSIYDAPA CDELVVALGA ATRGRPHHRI
181 GDRYSDLAAL GRDVQDPAGV EPKK
SEQDB ID: 3101377EKK
Reference:
3101377
Name: SecA DEAD domain protein/helicase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTFPGQAP GAFYPRAPAE PAKSKLDRWI EKYTTLPRRR RRARPSRFFA WRVLRRGKAF
61 AQMSDDRLQG EVRAAAYGMR AARAHPGEAL LVRSFALIRE CAGRELGQRH YATQILGARA
121 VLNGAVAEMQ TGEGKTLAIT LAAGTAALAG RRVHVITAND YLAGRDADTM RGLYARLGLT
181 CAAVEPGCTP EERRAAFAAD IVYASGKEVA FTFLRDRVAM GGRAGDIGLR TRAFFDGTGL
241 LLPGLQFAIV DEIDSVMIDE ARTPLILSVP PADAEVEAEA ARAAHAIAAE LKEGRDYRLD
301 RLRHAVELSR NGCDRLADLA ERMPPAWRPA PIREDAVRTA ISAIRLHQRD EHYILRDGKV
361 EIVDEFTGRI MPDRSWSAGL HQAVEAKEGV EITSRRVTLA QITFQRFFRR YIHLGGMTGT
421 ATEAADEFWS VYDLPVVRIP THKRSRRRTW KTQVSTRAAT KWARVAKRAK ALSASGRPVL
481 IGTRTVAASE AASAALHALG VPHRVLSAAQ DADEAAVVAE AGRAGAVTVA TNMAGRGTDI
541 ILDAEARKAG GLHVIMTEKH SSRRIDRQLA GRAGRQGDPG STEAILSAED SLLPEFGGRY
601 SSFVTRFGGS AVLSALTDAQ RRAERTHVAA RRRLLELDEQ MAENLAFTGT PE
SEQDB ID: 3101377EKL
Reference:
3101377
Name: peptidase, Isotype: M50 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGTLHSQTW YRVADLTPRL RTHAEVHRAV FRGEVWYVVE DHASGAYLRL SEAAWRLVGL
61 MNGRRTMEEI WRAAAEALGD DLPAQDEVIQ LLIRLHRSDV LHAAIPPDME QVVQRGRTDS
121 RKKRLASLRN PLAIRVPVLD PDNFVRATGW LVRPFFSWFG ALVWLAVVCG GLFAALQNID
181 ALQSNIADRA LTAGNLLLIL TVYPLVKAVH ELGHAYAVRH WGGEVHEIGI MFLVFMPVPY
241 VDASASSAFR SKWQRAGVAS AGIVVELFLA GGAALLWVQM EPGLFRAAAM NVMLLAGLST
301 VFFNGNPLLR FDGYYVLADL IEIPNLGTRS TQHLQYLAQR YLFGMKNAVS PAMARGEATW
361 FTVYGLLSLI YRYMIMLTIM LLVAGMFFEI GLLLAFWAGV LLLIVPAVRG IRFVLGSPRL
421 EGHRFRAVTV TMALVLAVVW ALFVQPVPSA TIVSGVIRAP ENARALSGAE GFVEELLARP
481 GDTLAPGDPI LRVSNPLLDA RVRQMEARIE ELRLRRFNAL INDRVRADMI AQELALAEEE
541 RALAVERRGE QIVTAPVAGR LLLPAGDDLV GRYVRKGEEL AWVIGSEPGI VRVVIPEAKI
601 DLVRRNIEAV QMRLTSAPLE PVPALLTRGT PAAVPVLPSA ALATEAGGPI AIDPTADKPL
661 TPVGTVFVMD VEPTDERPLT ALGERVSVRF DHGSAPLGTQ LLRAVRQIFL RDLNV
SEQDB ID: 3101377EKM
Reference:
3101377
Name: GAF domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDSRSNFETT AGPGERGQEP AQVSSVHPDE QTALAAWTDQ LCKRLNADIV VLALGPRDTG
61 PFQLAAHAPA EAEPGEGLSS AVDLTIAQRK PIVKSGYQEH GKTCCAVGVP VLRDGALFGV
121 IAVQLAVRAD LDLRRVVDEV KWALPAMELR LVVRDLNEGA LSQARARAAV ELLAGALDEP
181 RWSVAAATAV TDFCDRLACD RVALGRRHRR RSKVVSLSHS GNFQRSSELV QRIADAMDEA
241 IDQGEPIRMP QDSDNTLTLT AAHQELIHSG VPRAVLTVLL RRDGRVTGAM VLERGGNNPF
301 RDEEVELVEA VAGILGPVLE EKRLNDRALP VKVVAEIGRF GAAVLGPRKA GLKAAILLAG
361 VALWFAWTTA VPFHITADAR VEGEIRRVVA SPLDGYVASA AAIPGDIVAE NDILATLDDR
421 DLRLEIARWN TVRAQRQREY ETALADRDRA AIGITATQIS QAEAEIALLE ERLARTQLRA
481 PFDGVVLSGD LDQSVGAPVS RGQVLYEIAP LDAYRIVLSV DERDLALVGE GLAGEVILTA
541 LPGRTFGVET GRVTSVAGVE DGRNVFRVDA QLPEQTNLLR PGMEGIAKIT VDERPLLMIW
601 THGLRNWARM AIWRWLP
SEQDB ID: 3101377EKN
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPKVISSQK PRFCLSFLAL IGVLPRDALS NEKQMKCRGQ GGFVAMSFPF IRGLKIPGSR
61 RDSRSLFARK SGTSGRKVHV EQLEPRLLLA ADFAVSMADA MQVDTAALRL EGFQSESGAA
121 LRALNSSGAQ IAQAFGGVDT VPLSSQIRVI STEKDDRIEI DALSLFEISK QSSNLPLFEV
181 EGGEGTDTLR VVGGDLENGL RTYTDWHIDD VTEEGASGVA SVTLRDSNDA EVATFDIAFS
241 GIEVLAGTQG DDTFYLAASE MRKGITIDGG DGDFDSLVLD GSYSSVSYQA ATANDGQILL
301 DGTALVYLGL EPITQNSASD DLVIDLTDYD DDAVLNSFNA GTMYIGTTGG FTPTFENITF
361 VNPTNSLTIN LKSGSDTLTV ESLSANWDAS LYIYGEYEGA ETFLGDSGED DVTFSGSIDL
421 GSSGSMQVIA ETITVNDNVS ITGDTSEDGF IEFRSRRLGT AELENLSPIF PGIPKYAAVD
481 IGENASIEAG GVYLIAQAEE RGYAEQLEIS SALDTNLVGP LLGQVTSVLG LPFQILVKKT
541 DAKVTVADGA NIVGHSAVGI YANAVTNASG SAGFSIASLG WADSTANADV DIGDANIYSD
601 GFVVVTSDAS STANMSVETN TGLGTVPTSS SSQVSLSLAV ARSTLSSTLT VAEGATIEAG
661 LTANLLAGGS VDSQASATSG LFASGAAGAA LAIELSDADV HTNIHGTVIS RNEPGAVVKL
721 EFDPLAAPGE RGYVDLENNR IFVGPNALAT EDTVVYTSSR GQNIGGLIDG ATYYVLKDSA
781 DPNYIQLAKF EDSVFRGDAV DLVEFNGTAS SPLYPATNNK SFTGADVDSE KGEIKLSNGA
841 LTGSGTDFTT LDQTYPLGQA VIYEAAAGSE IEGLVSGNTY YVITGTNQFN LDGGARSFYG
901 ADGQTIQLAE TENEAYAGVA IELGNVTGDD FTLRAAHILD AGFATGVGIG AKLEVETTTE
961 AGAGLSSADS NGSNSPDGYN LNDSALGNIF SSMMGRISTE SSSNSAMNSA GASPNSLSAA
1021 VALAFAYNDH DVSVNVHPTA RISSGEDLEV KAEIEHLNKA FAQSSTEPQE ENETGEQSAP
1081 NTISAAVILT ITDNDAQATI HGGAEMDAKR ATRVIAGVTY PFAQTLDQFL PTTAGEVVDM
1141 FKTEGYGAIT QYVDDTFGLS SFLNTWSSST SKGDNVSVAG SINFQVQDTT AIATVKDGAL
1201 INQDASFNAD ETDPYFGQEV VSVEATSYMQ QIDMAGIFGW SFGSLGLNDL YVSSSGASFD
1261 GGTPFDTESP SVAGNSGGKG GIGATLYVKL VDNTTHAIVE DNARIFTGRS GGFNMKAEEA
1321 LFNLGFAQSG AASDSGFGVG GTISVIKQNS DTLVQLGNRA RVTGEDARLY AGSLDTHIGI
1381 TGGLFLGESV GVGVSIAVND VTRNTRAVIG PEEPDAEASY TAASANYLDL DGKLSVRAIN
1441 DGAIWGFSIA GAIQSNEQHP DRSDDPLDGV SLGILFGDTP VENPVTTGVG ISGSVALNFV
1501 KDTTRAAITD AGQVKAGSLE VTSNNETQVV SVSGSFALAV SRGQTGNSGT QTGVGVAGAV
1561 SVNTVSGDTE ALVLGTDFSI TEDPDPNDSS VEATGDGGMI IDAFRVGDIF SLAGSLGGAV
1621 TTSQSNSTIS AGVAISVGVN LLSGKVRSYM SDSDATVYKG SSQVLATAAP DILSISGALA
1681 FSYSGGVSGS STSAAVGIAI SVNEIGTEDE PFEVIARVHD SVIEVMDGDI TVKADNQSEI
1741 ENYTYGVALA ISNSSGGSSY AFSGVGSVSV NNLHTVVYAE VTEDDNETEL TATKGAVTVS
1801 AKENAKIDAD AGGFGLALAL AGSGGGGFAG GLGLSIAIND LSSDTMAIVD GAAITAGTVL
1861 NTGDDDVVIQ ADLTAEITAL TIAGAGTASQ GDAAIALAGT GSGNRLRIRA LADVDGATIT
1921 GGDKGIRIEG GLGETSKIKA DAGGVGIALG LSSTASVSLG IAVAVNDIQG LADVTTPDVG
1981 ATVNGSTLTT DDGALSIGAI SGADIDTFVL GVSVSANIGL TDSTAIGFSG AGSVAISRIG
2041 FDTEASLTDS SFTSSGGGNA TLLAQDGSTI DTFALAGSFT LAVASGGTAV AASIAASVSV
2101 NEIENGIVAR VSGSDILTRG DVTVSASTVP TTSQNAQDQL AGIADFDYDA TEDATINAIA
2161 IGVAGAVAIS PGDASISASL AGGFAFNDID NTIVAEITAD STVAGVNDGD KVGKVDVLAY
2221 DQANIFASAD GGAISLSFGD PAISIALAAF VSVNDIDNVV TARISDSTVQ ARDTISVHAR
2281 STASIESISV GAAASISIGQ QTAIAISGAG GYVANTIGNT ITAEIVDSTD STGVPRVSGG
2341 AVDVYAEDVS TMDGIGVAAS LAFSVALNLK DGVSVSVSGA GAGVYNTLNS TLDANITNST
2401 VAATGADEDT EITDNLSGDV RVQADSNVTF DDTTVAVSVS AAISLISITV NAAVVIVQNQ
2461 ALGSVTASID GSTVNATGDV TVDASDDTSL DSEAIGVTVS ISLAGLAGAG VAIENKIDRD
2521 VTAQIVQAST VTAAADVTVD AYAEQNVMKS TGTAASIAVV PISISGAGVS AEALVNSDVT
2581 ALIDGSTVTA SAGDVVVDAQ IDTLAYATAQ GGAFGAVSIS VMLASAEVTG LVRGGITGTS
2641 IVTGRNVRVT SVSNATADVS LISVGVGLLT GAGIGAAPDA EEGASGNVMV SRSVEALIGL
2701 PEGSARQTVT ANGTEEGSGK VEVDADATHY ADVDATAVTV GGGAISASLS GVNISGDILA
2761 IVDEGAIITA RALIVDADSY LDAYAEITGA AVGLLAGAGS NAVATITGTT RATVGADRDR
2821 ASSTVPTTLT IGAGGTTVQA VSEAFAETLS DGGSGGGLSI TALLASTTIN TDVIANVGQS
2881 TQITGGALTV TADAFRDADS EVLAAGVAAI TGSGGSADSA IMGETSASFG PGDGTTPGSN
2941 AAATTMINGG DVTITAIENS DSYAYTHGGS GGAIAIAALI PTAYVTTTME AYVGAGTDIG
3001 ADNLTVTANA EQRKASVDLL VVAVSIAGGA GSTGTAYVGS ADNSAYSNAD AWIGDGAVID
3061 LTGDLTVKSI TSFDYAAVDG DVGSGGGLAI SVLLSDSDLS SGSFAWIGDN VEVTGRNVTV
3121 EATSQAGTFS DVLVGTGALI GGGGAQTSAY TYTRTAAYTG DGASLDLTGD LIVTASNIVG
3181 EAKGKASAYG GGVILVGASV SDAYAKNDVE AFLGDNGVII ADDVTVGAVV EDGNANPPSN
3241 TLTMDDSNNT INFERHGLQE GDAVALTGAG SANGTYTVME IAGNSPDPTD NFRFGAALTV
3301 DASESFLATA ADLPVIGVSA AISQVDAGTD QITFISPHGL ATGDTVSSDA ATSGMAYVRA
3361 INDFVIELYE TEAQAQDTTS QNGLLDVEAP VGVDAAADRI YLGASSDLYT GQLVGYDPGG
3421 AAAVAPAGQL YYVRVVDANL NAIELYTNQS DAENGTGTPV NLTASTGTHL IYQAAPEGAA
3481 QVDALSDTIR FAYAHSFKDD MQVVYKPSGA PISGLTADAT YQVRVVDEFT IRLATSDFNP
3541 STDRLTFSGG NISSGVIDPA TMPFAANDLV TYSNTGTTKR FEASFVDLQG SAETPDTNSS
3601 GELLTTDNNT IYLGTDLNRD DVYEGHGFAN GDLVVYEVEN GGTPVGGLIS GRGYYVIVVD
3661 AYRIQLAETY FESVGYTDPN DSSNNIAITP IALTRSASND AVQSLTRAAD LPIIGLDQGT
3721 TYSVTSNGGA LADGFVLRDA SGNTMSFAGT VNVILANGSV VVQALSNANR LERVEVNLGA
3781 PVEGRHEFRV ILDALPGNPT DATGMGLETT EGRDIREAVL VAFDGQTKAE ARGGGGAGIG
3841 FTFPVADSGA DVMAQAYINA DLVRARGDVT LYSLTDTSLD LVVSNIAGGL LSVQNSDGDQ
3901 IATSYSTTAV GKLTRITGGT TEGTSATILS IDSAVTELTE VQAQDVTIEA AGNYRQYSQL
3961 DFDHTAEVIA DGGGLIAGAG AYVENDLTAR SNSVIGDGAT IDAETVDVSA NMGIFDNPTS
4021 SSLSGDLTMD SYARAEAGGL FGGTRAESDS DFDYDSAVLI EGSLLAGKDQ LTDGTLIQGR
4081 RGVDFEVNRA SYSYDSDYRA VFWGIGAGTG ETFGSASTRT VIDGDAGATI FAAPRLIGGE
4141 NVHVDNVPPS ALNTYPGYND LAVYVSVTGD LIEWDSDIEI SAGPSPELVV DASGDVVRAY
4201 NVRLLNDSGA FVLPEVGSDA FSDFNGSDQI VVDDIIAANL GSVVFNAPLG SISQENGNFD
4261 GKHWAELRVL RGFGEVRLTN LSNYDLVVNR IDMIAEAGHA RVLLVDLDTV ESAMQFSIKE
4321 NYGNALIDIR NLGAGNIVLA GSNVDGASIE NPLGETRILN TGGDILTEGA VIRTNTMGDA
4381 DLARSFRDTE FMSHTVAELE VTAQTGASGA VELVRTDGGD WSAMGIGERG LIRVGDEVHQ
4441 VAEVNGDRLT LTRASSITAG TATRIVSLFH GIEATSGDIG LDGTAIKVDL TRVASENEAL
4501 YAASGDSIWM DLGLRLRTGD TTQTTATVAV GIVAAATEAS LALRSAVRED VDGQSQGVLV
4561 TGDTGDNGTY YQFFYDDPDT VNRDLGPGAG YSATATELAV TTWDFDLIEA GSRITANGTD
4621 PDGSTVRAPG DNTVRIVANT NIRQGDTDGD GAHYIDAATN GDVVLTEIDA VLSGDLDDLR
4681 VGRIDSSAGD VTLEAPRHIL DSDPTDGSPD PWDVGGVNIT MTARTGGVGT DADFLETNLV
4741 DSVLNVSQSG VLTADAQRTI RITETAGNMR VNTVDSELGD VTLTTRAGSI LDSNSGAGED
4801 DNVTGRNVDL LADGGSIGLS SDDFDIDSGI LGDWSGVVTA DGDTGVYLTE TANELNLLYA
4861 LSTGGAVRLT IPDTPATPTL PASPYGHAQV PRILPRDVSS PAEDLYLLEN GTRLVVQNAV
4921 QSFDSARVDA FNTVDLWVGD NLSMEANSLV IAGQTVTMQL DTTRTGASRS GTDADAGYGS
4981 NAELTGTIQT RGNQNGDQFL LQSGDDVDII TVNSLKLIAQ GFIRTAGDED EITVNTLMTM
5041 DTYRDNGYRD TLDLDGAEGT DVYVINTTGT YGEERDYLIN VLDTGAPDDG TDTLAITGST
5101 GSDLFLLREI TSIENRTADR PSFVALMHAN PNGTDTSLDN AIDQAQTSSD RPSNVQRVNY
5161 DRAVNGRLTV YGLEGDDMFA VDGNSTITTL DAGAGADRFQ IGQFHGVLDA NNPEGAAFHL
5221 NAAPGDEPAE IIRTTRGYIT AGPSQSLVAK GGDGGDTFTV YSNKAEIRLE GDAGNDIFVV
5281 RAFALADENF DPILDQYSVE GRNIINTGTG EDQVTYNLNA PVSIDGGAGY DKVIVLGTEF
5341 GDAFVIREDG VFGGGLNVNF ENIEVLEVDG LEGDDDFFVL STPIGVAVRI VGNLGSDVIN
5401 IASDVTEQIS SAGLEGQSSV INHDVLSDGR YEGLSIEGVE MTVAGDGSGP VSIRELDENG
5461 DEDGYSVVRE GDFGDRYEIS LNEAIAVGTR VYITVSAARS SDDEDAWDPT EAPRILLDRN
5521 NDGLPDEGDS VLIGASEGDY FDTVSVNGTD EQVPTRDVVL VFDSTNWSDA QTVWIAASDD
5581 SLEEGERKIV ISHSVQAINE NGADQDAVDL YDGLAVRNVE VTILDNDQAD VILTHDGTDT
5641 RVLEGPDGFT DRVGISLSRA PDPGETVTIS LAELFAPGTD AQLAFDTPTI TFDSSDWDSV
5701 KYVTLTAIDD SKPEDPRGLQ IQATVTSTGG AFDDAASQVL GVKVLDNDTP GVVITESAGD
5761 TLVTPLADDD YTIRLTSAPN AGEVVTIPLL TDGQASIVSA IDTSDNSNRL IRDVDVGTFE
5821 VAEFFDGPVT FSGDTITRTD LGSFVDANLY VGARIAISGS TANDTGTEEY YEVIAVTDTS
5881 ITLAGASFTG GADTNVSLGE VSISMLFNGQ VIFGDETVTE NGVTVDGDTI TRTDGDSWYD
5941 DGFLPGHEIR IDSGPNAGLY QIALVEIDDQ GREFLRLTSS GSLTVGTGNV RVVRVADAIQ
6001 FDDSNWATEV QITVEANQDY TLPVYLQNKM SFSSVHRLTN IQGPVSVEGG ATGADRTLIP
6061 AIILPGETPG EAVDIGPQPD EFAQIDVLNI FDDASQEDKS GVLTPTGLTG FGMALELNFE
6121 ETDFGEPTTV PGGISWGTQV VDTSGNFVTD PLLSSIEILN IMMGKGNDAL RIDGTLQPTT
6181 SGQGGETAIH GGLTMIHGGG NRTEDGGDLI MVDGGGGSES LLVIYGDTSQ DGLFYSGSGE
6241 NNNGHNFGER PFPPFTSEAL ADIRASFVMP LADPFLIAGK DEILVFAELA GEMTFDAAAL
6301 TIQATSSWLD AGFRQGRAIE VELTNGATAS YRIAEISADG LTLTLEDGAV LPDGLRQARI
6361 TAGGGAGKVT AYGGGNDDLI MGSREGDHLA GGGGNDAIFG QQGVDQIWGD SGFNVDIFGD
6421 LTLYNDDTLT NAEKRALAGP ILTIPVAGAL ISEAGDAMIV GDDSVFGGMG DDVVFGDHGR
6481 IDVTEPPLRI RTTAYEYIVT IASSEIDNGG DDLIFGDAGR DILIGGANRV VQGVPNGDRI
6541 DGGTEQDLIF GDNVTLAQRA VGQYQDQDAR IVRLTGSTIY NRDGSANVDT VTLFDDPRHA
6601 GSPWTAFEIT ELYHDVAYQA RNDGQFGNDD IAGGASHDKI FAQLGDDSVQ GDGAILDLAV
6661 SATRDADGTL VHVPSFEAET DGDDYVEGGG GNDLIFGNLG QDDLIGGSSS LYTLVTPEQR
6721 PDGSDVIFGG AGTQIAIDIL GTDANSMLGA PSEHGRDADV IVGDNGNIFD LVGGPNVWLI
6781 YNYDRTSDIG NNTVDPSQVH LRSDIRLIPR AVVQLDYTPG TDVGSLGASD LVYGEDGDDI
6841 IYLMTGNDVG YGNGHDDQII GGTGDDRIFG GTGEDGLLGD DGVIRVSRNG LAEPLNGISA
6901 EAQRTLSIPG PWIGAEVDLN GYLKITVDAI LPKEGGNDII YGGLGDDFIH AGAGDDAASG
6961 AEALPIFHND TRPIANTPML YEPDSGILTE FYDRTTGSYQ TFYDPDDPRP IIENYFLNFR
7021 TFDDDGNLIE DGKDAIFGGD GNDVVFGGTG HDRMFGGWGD DYLQLDDNLG TNGGRNDTSD
7081 SAVSPQTTGG AADFAFGGGG RDVLIANTGT DRMFDWTGEY NSFIVPFSRF GAPTVNRLPS
7141 PHAVEFLLDL AEATGAATSR AEAYDLIAMV TPQDPEWGDQ HGAPRDPQPG NGRGAFDSAG
7201 GPENDTVRVP LQTAAGSTPS GPAEPGTIEV GLQIEKAINA ADPWSPTDAE DADTAAEAVV
7261 LSVGTDVIWT YLVSNTGDES LHRVSISDTA SNGGRFTPTY VAGDANENRR LDPGEVWLYT
7321 SEGVGDHTVV AGPYSNVATV TARGSRGATP TDSDGNHHVG VVVTDPPPSV TIEKAINALD
7381 PFNPTAAEDA DTGPGPVLET GSAVLWTYLI TNDGAVSVSL DSIVDDAGTP NDTSDDRTPV
7441 YVSGDDGNGM LDPGETWLAS LGGVAADGAY VNEVRVTVSD SYGREATDTD VNHHTGTRVP
7501 GGSSVTLVKA VNAVDPWNPT VAEDANALNG PELVGGDAVV WTYLVGNTGG GALAVGTLID
7561 DAGTPGDGSD DFAPAFVSGD ANNNGLLDTD ETWLYRAVGI VTPGDYVNVA IVTATDASGA
7621 QVTDSDLAHY HGTPPPGTPA ISLEKAVNAV DPLEPTKEED ADTIPALVRA GQDVTWTYLL
7681 SNTSDVAVSV VSLTDDAGTP NHASDDFAPV YVSGDDGNGL LDPGETWLFS SMGIAPEGDY
7741 ENIATAVAVS ASNQQVSATD NARLTGVADQ VKLVKAVNAV NVYAPTELED ANDAPGPLFV
7801 EGTPLIWTYL VTNEGAGEVV LDKLTGVIDD AGTPDDTSDD FAAIYVDGDT DNDGMLDAGE
7861 TWLFTSEGAV DASATTGAYG NAAAVFAGED RSITDTDLAH HYGVDQGEAA GLTPGFWKNN
7921 ATQHGASAWP TTSDGTLIYD PQQTLDTVFD IPVSYAHLAD VTLVDALGLT GGGENALIRH
7981 AVAALLNATS VLVGYPASAP QVIAWTNEAL ASGSRAVMND QKDMFVDWNE LGADLDQHGR
8041 SQSYLDIVTQ SKIYVPWLLD DLSTPETSDY LVYDDETSTF GRPPAGGAPH FAL
SEQDB ID: 3101377EKP
Reference:
3101377
Name: SapC protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVQQLFYKT AVPVSAKRHG DLSISSGKTY AFARHTNSIP LTALEFGPAA GTHPIVFAGT
61 GEDVVPAIIV GTREDENLAV DADGNWQGTY IPAFARRYPF IFSLDKDKNQ FTLLVDEEFE
121 GANRDGRGER LFDSEGEQTG YLKSVLKFLQ DYQAGFARTQ AFCKRLKELD LLVPMQAEFS
181 LGAGQKRTLG GFQVVDREKL KALSGEVLAD LCRKDELECI YLHLSSMRHF RQMLERANTE
241 ASEAEPETDA ADVAEPMAET
SEQDB ID: 3101377EKQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTAIYFAAA LAAAPCSAQV YDCVIDPSET VDVAGASGGV VARVHIEPGE KVERGQLLAK
61 LDSTIQSATV AMLRLRADDT SEIEAQKTQL AFLEARLGRT QELSTRGVVS REVLEEIQTA
121 VEAARSVLIR VELARRLAME ELKRAEAVLS LLEIRSPIDG IVLERYFDDG EYLPLEGRFA
181 TIVQLDPLDV VTFLPVAEYG TIQEGDMAQV RPAPPVDGVY QAEIQRIDRV FDVASGTFGL
241 HLRLDNPDLS IPAGHRCKVA FGSEIGTSSS D
SEQDB ID: 3101377EKR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNGAWTDQE NDLIVADYFA MLADDVSGRP YNKAEHRRGL LPLLNDRSEG SVEFKHQNIS
61 AVLKGLGEDW IPGYKPAFNF QMTLVDAVAR WLALNPAWLG RHSGTRAPTG LAEVRPIWIG
121 PPPTLSNQPP PQELEQMLHI ARKFDVAARD ERNRALGRAG EERVLAHERA TLKSAGRDDL
181 ARNVRWVSEE DGDGAGYDIA SFALDGSPRL IEVKTTNGWE RTPFHISRNE LAVAEARRSE
241 WSLFRLWNFA REPKAFELHP PLGAHVSLTA TTFQASLH
SEQDB ID: 3101377EKT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLEIRHLAA GSDDPAEELL NVGVHLVVGG AAHPHVVVHT AHLFVGCMFG RCLPGPRLKR
61 LLDGISDRLF RLGHLLVHPH MGRQVFAQND RAGGRHHRQD EHRAEVEDHH AQEDKLDAHR
121 QPGRLGGQVV EGFTMRDQTF RRRHIGGIGS HAYLDGTLAI LDQRGKLAVD TGTFRRNLVQ
181 HVLGSRGQAC TGIDLPEALE SDVDFGDPRL DGLALRLLER RHLVGKRICV AFAPHRIGTI
241 AAGLPKAFGG SVLIVTGERA VNLAEVGQKR RTFGRQRFEL SGDSRLRHHR GLTCIGNDRG
301 GLAVETFDLV AFGGDHAVDP FGRGHCQGPV DLARLVLEVT RRIRPEERDI EEACQRQRHD
361 QRDGDPQQQM HRPGQQGFVS FGGEPERLRQ FAARVRPNPA QHGPVDGEDD HPRKDGPRQV
421 DEGKAAPRDA KGHPPAQHGQ QADQDQRQAG KPHGLDFVVR RSREFFIARP GKPSSETALE
481 GELPGRARSF VVLASNLNGH P
SEQDB ID: 3101377EKU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEIEMTDDPT NPKKSMTPHR LNMNDEMSTS ITNAIDQLAT DGSLYTRWRL RGVRSREALK
61 LAESALKESM AAKNRTFVVA VGLAEDLARK LLLSDALRNT EAVEREITHT INDALRNFEG
121 LVTQREQAAY MVELERIAEA QRLLDAGKLS QQRFEQLVKS INDSTDKIVL GVHETTREIL
181 ANLRARFNSA LRQLGEAA
SEQDB ID: 3101377EKV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMARLILFVA AVVLVAMLLT GGFREGPLGP STTASIEALE ADPGQWERKQ VRVTGTVGQR
61 IAVAGFGGFV LTDEAGREIL VVGQANPASP GQPMTVEGQF VTAFVMGEMS MPAIIVGAD
SEQDB ID: 3101377EKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMMMPVPATC GFATASFMAV STDLSGVGNM TVEQSPPAPL DHSGFAPCKA RDSLRHGCDM
61 DRAIIKKGSD QEHNEHHANR SRHRSLVVDD DRFGLKEYEK IYVRMPAATN KADVVMHDLH
121 AYSGDAAKGL LVPFNPSCAV YGASPLTKET ANRTYRMTAM NDFSGRPEQP PSESEVQAFV
181 SEVKKYHSEF LRAYCLKKDQ RLDPDKFTSD VLNSVQRRYF DTESFRVEVS EKGIRELRNI
241 RYFWGIVRNT FREHQRKHYN AMPRETTLSE TIWLRLLLCR EDGTVFPLVR SGMSLEERRW
301 LEKLGGKKMK KVRRVAAPRG SAVWALDEAK APLTLALTAR GEGGGESDLE KLLARRYIEK
361 VPVADPAQMW KSINGVPYGL RLSSLGRSYI EQLGTAATLI SIHARGKDEE KVLADGIDRP
421 QEDLDDYYST SWYVGLDLSL NDVLAVAVER LGMPKIHARI YLLRKVGDPP EEGKWPRRRI
481 ADAVDLHPRK VERIEDAWDE HFKNPEVHEL MRKILSRD
SEQDB ID: 3101377EKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYRGPLKSGA GSAQSWLPRK RERTTPGCSC LLWNGTKPLD DRVAIAEDQS VPPFREVEIL
61 SKSWLHDQSI AFAATLLGEV DISLEARALA AAEFIAASID RFSNGLVSDS TLALVTTIDR
121 DYCDAEKLSF WGFERLPECA AALEEAKKVA QAELARRDAV ATRNLNRMLI SHAVYLLKRP
181 HLPAVRFLTW LNRAVPASVP GVKRILRDLQ HPDSPRREAI EAVLQKVRDT TLQSRDRLDY
241 LDELHELVLS SAFEQRDVAV VWWTRICMAY RSSLFCWPLL AEQGPSEQDG QSGSRSTRLR
301 GLSLPISLFV IEDGKSDWKP RPNPGGQKIW FKYKLSRKEE SGHKEPRFRP PEGRLPAHIN
361 GYLFGFTADW WQAFNVGLDV AKKLWNSQNG RLRFADPVAA EQKLKASLNV DLRAACDIVD
421 TVLSKVSDKE WQGQNEETQF FTVSDRSAEA YWVQCVLSLM LPSGDLPMGV CTGTVNYRNN
481 EYEIGIVEGV AAKLEYANRA GFPRAIVPGV SRDYYDADPF SDDEVDDDAE KKSDPADIVG
541 VSPASADPGI QPEVSNLPEE STKEERIKRE LKDFLGRLRV AGSRKTIEVN FALTARAAAD
601 AMQPAGWRRT NFLRTPEFQR MFSRTQRRLF MRDALRDRTM SRRLKRSDVM AYQENPWRSE
661 EEQRLERLDS ELQSRTGRTV KHITRETIRK IVPGTSVDEA LGAWAAWKDN QVRSGTGNDY
721 RGPGLGVVTL RTAEGDTETR VWTALAEILV ADEVWWERFQ WADLPQSADL LARLLCNHHA
781 DPEICEESAP DLLFVFDDRG FATERTNQIF PSEFHHQFID LLNPRLRTNN KFDYLDAALK
841 KYSQGDRELE TRVIVVLSED APIAEAPLLD DIELPDTQRK LLECLAIFRF GCSRHSGFSM
901 ANFDTARDDQ LDWPSYEAVL SGLRRRRLIA ITRNVIYLTR MGRSLVGAGT LTADPMRQAL
961 VHRQAALSLC PILSPAGARI ATNRDRQLEP ENVLEATWHL EQAFRLVPWR FRGLIAPRDG
1021 LPSVTDSQAL LTFLRTMPDW DTVKRLRVNT ATRAESVELC HELLKSQKDV LQHEPPSLVV
1081 GLTIETMGRV FKNEVQRESS IEQKVTEIVT LVDNAIARLK EEHLSPTEWR RRLRHLLSRQ
1141 LFALRMLGLP LNDPILAPAR SYIDTAVTEI LKPSFLEGLG AGREGLDDFP ISQDCWRMLW
1201 SDGNRGSTPN QTLTLVQRSR YAYAAARANL SKIRSDGSGR DSWDEPWIAY FTQARPEDIE
1261 PKQIAAPLNT WWSEYGVTEE ASQAFGRRVL DMQPHAQKTK RGEWRERWLS ELDTASGNLW
1321 RYVVADEKAA RLVGAPVAPA LRLIRVLAVQ EVLPAWRFVK DAGPEWLQRW PVLAGTKPGP
1381 HWPPTANGSY GFVANEWSAL ARAVIGHKTG WAAMLASLRL LPDNSARLAL LQSWLSCCRS
1441 LGINTLTGRD PENLRQLGHG LEISGDFGKH LYFAREYVAR FLDVGPVGAD LLQDPDDCAL
1501 LRDFVSQINQ FMA
SEQDB ID: 3101377EKY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MESGWMDTAL ARWAALASAS TIARRIDRPN DK
SEQDB ID: 3101377EL
Reference:
3101377
Name: YGGT family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSLFQILML ILDVIWFFIL AHVIMSWLIN FQVLNMRQQL VAQIWYGLNR VLEPIYGPIR
61 RILPPMGGLD LTPLVVLLAI MALRIVLINN AALFY
SEQDB ID: 3101377ELA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDATTHLLL PYILAAQAQK HVSHNEALRI LDGLVQLSVL DRDPTAPPGS PADGDRYIVA
61 SGATGDWAGW DLNIALWTDG AWLRLPPRTG WRTWVEDEAM LLVWTGAAWE VVGEPSDISD
121 AVFSLVNDAD PTKKAVFSLS GISTGTTRSY TFPNTSSELA ILAGTQTFTG NKTFSGTLTA
181 SGTVTVSGAT ATIGTATGTA TYGLGTGATT TGLTKTVNLG TGGASGSNTV VNIGSASSGA
241 NGTTVVNTPT VTFANAVTQV GMPQANLTAQ LLGLGGATAD SYNRLSVNTP AVLLNNAGAG
301 IEATVNKAAA GNDAAFAFKT GFSARALIGL LGSDDFSVKV SPDAIAFYEA IRIDRTTGRV
361 EMPEPVVLPA LDAVPTPPPT GKLALYARDR AGAGWLDVQR PSGRFFPLQP HFGVNRIATW
421 APSTGTTVNT DGMPRTAVGT VATPTLATSN LSTSMRRWRV TSAATADAAA EERSAGWVCW
481 RGNADGLGGF TYVNRLSLVT LQVTGMGFFG LYGSTTALAT TLTLSAVVNC IGIGFQRGTH
541 TNWQLVQNDA SGAPTLTDRG ASFPVASTTN VLTLTLLAAP NSSEIGVRVV EEVSGAVVEV
601 MLDTDIPAAT QLLSPRNFMN NGATTAAVAY DCSGVYVETD Y
SEQDB ID: 3101377ELB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTADPDKVI AAARSWLGTR YHDQASLRGV GCDCLGLARG VWREVVGPEP FPIPPYSRDW
61 GETGPREVLA IGARRMMIEM SPADAGPGAL VLFRMKPRAV AKHVEILTGP DTFLHAYERL
121 GVIEEPLTAA WRRRIAFAFL FPQR
SEQDB ID: 3101377ELC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTLLEAPVR AIAEGDAFTI RAGCDKRIET CGAKFANTSS FRGFPHIPGQ DAVLRYATKD
61 GGHDGGVL
SEQDB ID: 3101377ELD
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo7
Sequence:
1 METLERQRGL RPDHGGPGHR KRRAQDDHDR RDLSQGTPHC VEPVREKGGR GRQIGRTKGG
61 MNTKLHAVAD AKGRPIGFFM SAGQVSDYTG AAALLGSLPK AGWLLADRGY DADWFREALK
121 DKGIKVCIPG RKSRKKAVKY DKRRYKRRNR IEIMFGRLKD WRRVATRYDR CAETFFSAIM
181 LAATVLFWL
SEQDB ID: 3101377ELE
Reference:
3101377
Name: type I restriction-modification system, Subunit: M, Class: EC2.1.1.72
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hsdM
Sequence:
1 MTGATLAKLT LEKLERHLFA AADILRGKMD ASEFKEYIFG ILFLKRCSDV FEQQREKILK
61 EQRALGRSET EALQRADHPS SYTKTFFVPP VARWDRLLND VHANVANELN KALEGLENEN
121 HNALRGVLGH INFARKVGES EIPDERLRRL ISHFNKYRLL DEDFEFPDLL GAAYEYLISE
181 FADSAGKKAG EFYTPRGVVQ LMVRILDPQG GTSLYDPTCG SGGMLNQGYE YALQHDGRRL
241 SLYGQEDNGA VWAICRMNLL LHGIPDADIR NGDTLVDPKH IEDGHLMRFD RVIANPPFSQ
301 NYSKRGIQFG DRFRFGWCPT TGKKADLMFA QHMLASLKQT GKMAVVMPHG VLFRGGEERK
361 IRIALLEEDC IEAVIGLPQN LFYGTGIPAC ILVMRHPDGK PDARKGKVLF INADREHREG
421 RAQNFIDPEH IEKIVSAYDA FADVPGFAAV IDNTAIIKDE AGNLNIRRYA DSSPPPEPHD
481 VRAHLHGGVP KREIESIRPH AQAQGFDVDT PFVDRDTDYA EFADAVEKRA DIRAQVESNP
541 GVATRQGEMV AAFDTWWSSA RTGLAELPET KRLMPLRREM LDSFEPAMLP VGCLDRYALM
601 GSIAGWWDEI RYELRVIVEN GFAELVDGWV ETLRSALEDE DADDDEDSDA KKTVKVTLEE
661 LLAHPFVRHR MADYVTELSA AQAEVERIKA EKEAWETGDG VEGAEDWLDG AEEGSNLAKE
721 LEKRRKELRA EMKDDDKRRK ELVKTTGTGK PSKGSIDWMR AQGMDVREFE AELTAIEHRL
781 APLVEEAETI DAMLAPYEAI KEELKEARAT LRRLKAAFVE RLTAARAELD DDDCRELVLD
841 IDRERLLDRL ERARVRRVGA LVADLERLWD KYRVSLARIG SRRADATARL DGYLKELGYA
SEQDB ID: 3101377ELF
Reference:
3101377
Name: type I restriction-modification system, Subunit: S
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hsdS
Sequence:
1 MREDPTIRIG DLADGIRGVS YRPEHLQEDF GRDRTVLLRS TNIQDGQLDF TSIQIVPSYL
61 VKPAQSVGEG DLVVCMSNGS KALVGKAARY KGEYGAPLTV GAFCSVFHPK TESDSAFLRH
121 VFQGEQFRRS IDIILSGSAI NNLKNSDVEG ISIRAHSPTE RATIADILDA IDDAILETDT
181 VIEKLLLVHQ GLVHDLTTLG LSKSGEIRRA DQLEEFHETD LGPLPHSWCV KSIGRMAKDL
241 ALGTAARGAN DGQDQLRLLK MGNLGWDALD TSTCELIDVD RVVHWKDALL LDGDLLFNTR
301 NTPELVGKTA AYDQDDQRTV CDNNILRIRF PSEEMDGRFA AAYMANGRGK SRLMTLATGT
361 TSVAAIYWRD LRDFQLPVPP REEREEIVRR LQVSRDTIRR EKESRVKLSN LREGLRDDLL
421 TGRKPVVAIR EAAE
SEQDB ID: 3101377ELG
Reference:
3101377
Name: type I restriction-modification system, Subunit: R, Class: EC3.1.21.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hsdR
Sequence:
1 MSQQDRLDEL NVVERPLLRQ LGVMGWTHVE GADEDPSTGR KDYHLLGRDT FQQTLLRDRL
61 EAALRRLNRN DDGSEWLDER RISQAISLLE RPTSRDFIAI NEELHDKIVR GVNVSGPDGE
121 HERRVRFIGF EPGDENEFVA VNQFRVDPPG AVGDRGYIVP DIVLFVNGLP LVVIEAKSPA
181 VTDPIATAID QMRRYANRRV PEKNEGAERL FWTNHLLVAT DYYDARVGSV TARPDDFLPW
241 RSVKPVGIEQ TRAAMDEVCG EIGKAPGTEL VQQEVMAAGL LRPQYLLDAL RSFTVYMTTD
301 DGVRIKVVPR YQQFRSVHIA LQRLQEGKTR RQDGMSDRRG GIIWHTQGSG KSLTMVFLVR
361 KLRTIAALRR FKVVVVTDRT DLEDQLSKTA KLAGQVMRVA RNADGAKTHL GRQEPDLVFV
421 MIQKLQERNG EGDEQEIVFA AENDEQPDAK GENLLPAKTD ELRSGKLVAK IGERKAFPVL
481 NESEDVLVLI DEAHRSHTSG LHQNLLDALP NAARIGFTGT PIEEKNKKKT REIFGTYIDR
541 YLLRDAEADG AIVKILYEGR ELKADVTDKG TLDGLFDATF AGKSADEREA IKDRYATRAR
601 VLNAADPLKA KAIDVLRHYI VNILPNDLKA QLVAASRELA VQYVDALNDA RDEIVAAIEG
661 AADILKDIAP EDAQEAGGDV AFLSTALPYL GAIKALEFAA VISVDHNDLP HLKAWGGVSE
721 TKQRIERFKK PLSQDALAIL VVKSKLLTGF DAKVEQAMYL DRAISGAELL QAIARTNRTA
781 GEAKRFGIVV DYYGVGKNLA DALAIYDAED QSDLTGGIGK PEDLLPELRQ VRDAVVKHFS
841 DVGITLGSDL QAFVDACVAK LKDQKFRAQF LVLVKKLVGL FAALMPRPEA RPFTRDVKIF
901 AFIAKAAANL YRDRSLDARG VAHKVQAMLD AFIAAHGIDP KVPPIEILDP NFAAEVARKP
961 SGRAKAAEME NALRHHISIS FEKDPAKYKT LSDRLEGILT SHHEDWDEIA RQLQALIDEA
1021 TARSDGGFSV HGLEPHTEAP IFGILRLRYG NDDRDADLAE LSAKIVQHLR EESAVSGFWD
1081 NPVSQEEARR WIFQHLDNCS IFDFGDLDAI ASDCMGVARA NRAAFTS
SEQDB ID: 3101377ELH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETIEIDEL VFSVKRSTRR RTVGVTVERD KSLVAHLPQG VALDVATRLI ASKLLWVHQK
61 LAEHGETARD DVFRIPEFVD GEGFHLLGKH YRLKLVDVPK NVTGVPSVRF EGDRILLRRE
121 QAASGGKRIE EYYTRAAHPY LNETVQRWKR IVGVEPGRFV QVMDLGYRWG SCSEDGTLNF
181 HWRTMQLPPR IIEYVVVHEL VHIKVPNHSE KFWKMIGSVM PDYESRKAWL KQKGGEL
SEQDB ID: 3101377ELJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPRSINIFL LDGDPNGIRV AQISMSTIQA IAFRRNQLRR VREAFPEIER PGVYILIGAD
61 EDAQDRQLAY IGESEGVGAR LSYHNSNEAG RDAKGFWTDT VVLISKDENL TKSHARYVEA
121 CLIRGVVSNP RWTLPNTRTP SDDAGKLPLP DRAAMDEFVD QTKTLVGALG WDLFREVRGR
181 APEQTAGREL PEAEIHESPR FFFRGEGFAA EMEIGPSGDF VVAAGSRARV RTTRTIPRGT
241 VTLRNTLVEK GVLREEGDFL VFTSAYSFTS ASAAAAAVIG ASANGRILWK LPDGRNYADW
301 EASQGMSDCA SE
SEQDB ID: 3101377ELK
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHRKSPPARP LTRLPALGLG LLLLAGCEEG ANLSLFQPKD KEAATSSETR STKLVERDVE
61 APEVFQVTEA GLWDGRPSLG GVWVAHPDVK EPERVIIRNA TNDKFVIGAL FRREREIPGP
121 RIQASSDAAA ALGMLAGAPV ELNVTALRRE EVQEEPPLDE TIAQADAVEP LPEVAETTLD
181 PVAGAAAAIE AAAPSPAPAA APAPATPPKP KAQASSLDKP YIQIGIFSVE ANAKSAADQM
241 RSAGMVPTIR QETTSGKSFW RVVVGPAQSK SERTALLKQV QGTGFSDAYA VKK
SEQDB ID: 3101377ELL
Reference:
3101377
Name: D-Ala-D-Ala carboxypeptidase, Class: EC3.4.16.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPFTIRSALL ALGMALTALP GFAYDTSARA AYVLDQSTGT VLLTKNADEA LPPASMSKLM
61 TLYVTFEALR DGRLTLDERL PVSQHAMSYG GSTMFLNTTD RVRVEDLLRG IIVLSGNDAC
121 AVIAEALSPD GTEAGFARFM TKRAQQMGMT RSTFANSNGW PAAGHLMSVH DLAVLANRLI
181 TDFPEYYPLF AETEFAFDGR APSNVRNRNP LLKLDIGADG LKTGHTAEAG YGLVGSARQG
241 DRRVIFVLTG LESEARRAEE AEAIVNWSFR HFATKTVARA DAPVAQAQVW MGAKQSVGLV
301 PAEDLSLLLP VLSDKRIEAE VVYDGPINAP IAKGQQLAEL VIKPDDLPEI RRPLVAAEAV
361 PAGGFVVRIK TAANLLLRQL NAGPAEAM
SEQDB ID: 3101377ELM
Reference:
3101377
Name: thymidylate kinase, Class: EC2.7.4.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tmk
Sequence:
1 MSGTGLFLTF EGIDGSGKST QARLLAETLR AAGHDVVLTR EPGGSPGAEE IRRLVLEGDP
61 DRWSAETEIL LFTAARRDHL ERTIEPALAA GRVVICDRFA DSTRMYQGLS RGDLRQLVDQ
121 LHALMIGREP DLTLLVDMDP ETGLSRAKGR QGSEERFEDF GPELQQRMRA GFLDLAREYA
181 HRFRIIDGNR DMDSVAADVT EIVLTHLNRT R
SEQDB ID: 3101377ELN
Reference:
3101377
Name: DNA polymerase III, Subunit: delta'
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDEIPAPDQ APGAPHPRET PRLFGQDAAE QAFLSAYGSD RLHHGWLLTG PEGVGKATLA
61 WRIARFLLAT PPQSDDGLFG APPPPDTLDI DPEHPVARRM QAGAEPGLAA ITRSLNDQGR
121 LRAEIVVEDV RKLGRFFGLS AADGGRRVVI VDSADEMNTS AANALLKMLE EPPARTTLLL
181 VSHQPSRLLP TIRSRCRTLR LTPLSPADMQ SALEQAGAGT EVMPEHLAAL ASGSVGRALR
241 LLNLDGLALY AELIALLDTM PRLDRPRALA LAEVAAARGA AERFDLLLGL IDIALARLAR
301 SGATGMPPQP EAAMGEAQVL ARLAPDPDSG RRWADVAATI SARARHGQAV NLDPAALVLD
361 TVFKMQDTAS WGR
SEQDB ID: 3101377ELP
Reference:
3101377
Name: hydrolase, Isotype: TatD-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTTDTTPEI TDSHCHLDFP DFEGQLDEIV ARAARAGVTR MVTICTRLKN EPAVRAIAEA
61 HAPVFYAAGT HPMSAAEEPM ATVEELLALA RHPKFVGIGE TGLDYHYTAD SAEVQQRSLR
121 VHIRAAQETG LPLIIHARAA DDDMARILAE EYQRAPYSCV MHCFSSSPAL ARAALDLGFY
181 LSMSGIAAFP KSQELRDIFA AAPLDRLLVE TDAPYLAPPP HRGRRNEPAY TAHTARVGAE
241 LFGLDYADFA ARTQANFDRL FTKAARFKAA A
SEQDB ID: 3101377ELQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDELRFTIL GCGSSGGVPR LGGHWGDCDP TNPRNTRRRC SMLVERESDA GVTTVLIDTT
61 PDMRSQLLDT GTGRLDAVVY THSHADHVHG IDDLRMIVFN MRARIPVWAD GDTQNALLSR
121 FGYAFVQPDG SPYPPILKMK TIAGPFEVDG PGGPIAFRPF RVGHGSIDSL GFRIHDLAYL
181 PDVAEIYDAA WAELQDLDCW VLDALRRTPH PTHAHLDKSL DWIARAAPRR AVLTNMHIDL
241 DHDTVAAETP DHITPAYDGM VIRYAL
SEQDB ID: 3101377ELR
Reference:
3101377
Name: malonate transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFQALIDVVL PVFLVIGAGY CTTFAGYFKP EHIDGVMRFT QGFAIPCLLF RAIANLDLNA
61 GFDPALLASF YMAAFLCFTA GLLGARLLFN RDWEDSVAIG FCCLFSNSVL LGLAITERAY
121 GPENLVGNYA IIAIHSPFCY ALGITTMEVI RNRGRGGRKM VTSVLNAMFR NVLILGIALG
181 FIVNLSGISL PQIADDALSL IIRAALPGAL FALGGVLVQY RPEGDTRVIV YICAISLLLH
241 PGLVWLFGSA LALPQDLFRS GVLNAAMAPG FNAYIFANIY GRAKRVAASS VLVATAASIL
301 TVWMWLMLLG
SEQDB ID: 3101377ELT
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVVDALGVS WVDFAVPRPT TRTMTETTAL IVAHGQPSDP DPAEAALARF AARVAASAPG
61 LSVHSATLAA PGRLEAVLEG LPETVPIYPL FMARGWFVTS ALPRRLGGRA NPILDPLGID
121 QGLPALIAAH LAKELDQRGW PLADSALVLA AHGSGRSRNP SAVANGFAEQ LQSHLGLARL
181 SVGFVEETPS ITEAARRHGA MSLCLPFFAC AGGHANEDVP QALEQAGYAG DLLPVLGELP
241 PVPALIARRI SEAGR
SEQDB ID: 3101377ELU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMKRRLCASF VAASMVVVPA QRAAADEAAA LIGGALLGGL IVNEVHKNKQ RQRQQTQRRT
61 YQSSGVSSAQ RQQNREVQSA LNYFGYNVGT VDGSLGRRSR SGISHFQSDM GYPIDGYLDD
121 HERGFLLTSH QRALASAHVA PYNQILASQG QGGLLRTYRN EQLGIQTPQG VQPVQPQTHM
181 AMTAPQAVQP SQVVTARAAT GAALPNFGFA QPGPVSINAH CNEVNLLTTS NGGPSRPGQV
241 REPVFALNEQ FCQARSQAMT EASQIEVTIP NMTAVQVEQQ CAGLAQAMAP QMVGIDTKAP
301 SEVVAATSAF LQNSGQPMAS LISGGKICLG VGYRTDNAEM ALASATLLAS AGQLGYGEVV
361 SHQLRQGFGA PVGMARAGEW MRLALNAAQS GSGVLGQTSE RVAVLNEAST SAAAAPAIPV
421 FSASTSGN
SEQDB ID: 3101377ELV
Reference:
3101377
Name: diguanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEDLAVLLER LCPMFVLLDR SGRMTRVGPT LQKLRPDQPM QGAKFLETFE LLRPRSVATV
61 PALMASSGAK LHLSLRDEPR TALKGLIVPL PGEHGAIVNL SFGISILDAV RDYALTSADF
121 SGTDLAIELL YLVEAKSAAM EASRKLNLRL QGAMIAAEEQ AYTDTLTGLK NRRAMDHILS
181 RLLAGTTPFA LMHLDLDYFK SVNDTLGHAA GDHVLQHVAR VMVEETRGDD TVARIGGDEF
241 VLIFNHLQER ERLDSIARRL IDRLEEPIPF NGEECRISAS VGTVLSTQFA RPDASTLLHA
301 ADLALYAAKR AGRATHRFYE SGQSSTSLEP LERAATPRSQ EEAGAGQGGA RNLAS
SEQDB ID: 3101377ELW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHGLINRAIQ SFVCNTYGQS RWIRVTEAAH LGFVEFEAML VYEDETSRRV LHELCLELGR
61 PQREVLEDLG TYLVSNPNTE ALRRLLRFGG VTYLEFLHSL DDLPDRARLA VSDLHLPALE
121 LREESGGRFS LTCHAGLPGY ANVMMGVLRA MADDYGALVM LEHAGARGKA EVIEITLIET
181 AFAEGRSFEL GARAG
SEQDB ID: 3101377ELX
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLDVAVAI RDRLAQAVAG TLAALALWAL AEVWGRDILP ERVWLCLLSL VLVHAGATLA
61 LAGPVGLVRG SVISLWLSLP ATLLTWSVAG RFEPASRLLQ HPQLVLALVG FVFIALPFLV
121 VRAEGRGRMF DYASLFAATW ETALRFVLAW VFVGLFWGVL LLSDALLDLV GVGVIDLILE
181 EAVLFYALSG AVLGFALAVI HEVRGRVSPY PVLRLLRLLL PVLLSVMALF LAALPLRGLN
241 ALFGDLSSAM ILLATAAAAI TLISTALDRD EAHAVASPGL RASTRALAIL LPLPIALAIW
301 ALGIRVIGYG WTPARLFAAL SAGLMAIYGL GYCLLALRGG DWTARLRRFN VTMAVLLLVA
361 AALWLTPLLD SLRISTASQV ARYADARAGR AELPIWEMTH DWGHAGQVGL AQLRALAVAR
421 EDAGLIRALD RAREVDSRYL FETPELSPNA DLVPELVARM QVRPIGAVLS EAELGGLPQH
481 QLQIWRDGCA RPLPDGRPGC VLMRGAFSPV APAGDQAIVL YLDELGLVRA THLRRNAAGD
541 LFLRPAGDPR QGDELAAEQL LLMQALDGEF AIVPSGQQAL AIGGVLISPR D
SEQDB ID: 3101377ELY
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVDTDTRKRR GGGRAGAAAR RGKAVIEQMP WRLPVNTDRP TEPLPPEGVE AIHDGAMRIL
61 EEIGVAFYNE EALALFRQAG CKVDGEIVRM GRDWVMEMVA KAPREFTLTP RNPDRTLKIG
121 GNVILFGNVS SPPNYWDMEI GRKVPGNREQ CRNLLKLTQY FNCIHFAGGY PVEPVDIHAS
181 VRHLDVLYDK LTISDKVMHA YSLGKERVED VMEMVRIASG LSDEEFEATP RMYTNINSTS
241 PLKHDHPMID GCLRLARRGQ AIVVTPFTLA GAMAPVTMAG AVAQSLAEAL CAIALFQYVR
301 PGIPCVIGTF TSNVDMKSGA PAFGTPEYMR ATQMTGQMAR FYGLPVRSSG VCAANVPDGQ
361 AMWETSNSLW AAVQSGTNMV YHAAGWLEGG LIASPEKFIM DCEVLQQIQR YMEPETYATT
421 PDDIALDAIR AVGNDGHFFG IQHTQDRYST AFYQPFLSDW KNYEGWEAAG AIWTPERAHH
481 LFKEIIGSFE SPPMDEGVRE ELADFVARRK AEGGAPTDF
SEQDB ID: 3101377EM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADISARKRI WGWYFFDWAS QPYHTLLVTF VFSPFFAAVA ADYFLGQGMA DEAAKAQAQV
61 VWSQCLTITG LIIGFGAPFL GAMADISGRR MTWITLFCGM YVVGAWGLWY MDPTGGNLWW
121 MMASFGIGFI GAEYALIFIN AQLPSLGTKE EVGQISGSGF AFGYLGGVVA LFIMLLLFVE
181 QGNGKTLVGL DPVLGLDPDT REGTRAVGPF TALWFVIFMI PYFLWVREPA GSGRRGSFAE
241 AVAMVVQSVK NLRHRGSLAS YLASSMFYRD ALNGLYGFGG VYARLVLGWE ITMIGVFGII
301 AAISAAAFSW LGGLADRRVG PKPVIVGSIL VLILVCATIV GMDRTQIFGI PLAEGSGLPD
361 FVFFFCGVLI GGFGGIVQAA SRSLMVRHTD PEMPTESFGL YGLSGRATAF LAPALIGAAT
421 AATGSARLGV SPVVGLFILG LILLIWVKPQ GDQK
SEQDB ID: 3101377EMA
Reference:
3101377
Name: HAD-superfamily hydrolase, Isotype: subfamily IA variant 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIDALLFDK DGTLFDFAAT WGAFGRAFLI RIGEGDAARA AELGARIGFD FDAARYARDS
61 VVIAGTPGEI AEVLLPELPG YSHAALVDMI NEESARAPQV EAVPLAPFLD AMRARGLRLG
121 VATNDGEAPA RAHLGSVGVA DRFDFIAGFD SGHGAKPGPG QLLAFADLIG LDPARVAMVG
181 DSTHDMMAGR AAGMTTVAVL TGLAGPQDLA PHADVVLPHI GHIGDWLGH
SEQDB ID: 3101377EMB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRISADAAET LALQALAWLV TNEELLPVFL GSTGADIGDL RARAGDRQFL ASVLDFLTMD
61 DAWVIAFCDE QGIAYDQPMQ ARAVLGGDEM HWT
SEQDB ID: 3101377EMC
Reference:
3101377
Name: diguanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQGTILILDG VSTNRIMLKV QLSAAWYHVV QTDRLEGIGA LLRRVRPDLI LCAMTLPDGT
61 AMDVKRALLA DESLAGIPMI AIAGQNDHTA RLSALESGIE DVLSQPYDDV VLLARVRSLI
121 RAHAGLEELR QQSGARDMGF AEDTAAFRGP ARIADIALVT QTPGTGAIWR SRLKGHVAHR
181 IDLHRMEDIQ HLLRDREPDV IVLELSDGTT GLRLLADLRA RGSTRNAAIL AIPNPANAHL
241 AADALDRGAD DVMPGGFALR ELVLRLETLL LRKARADRYR STLNARLQAA LTDPMTGLSN
301 RRHALPELDR ILHEATETGQ PFAVMLADLD HFKGINDRFG HPAGDAVLIE TARRLRSQMR
361 PGDLLARIGG EEFLIVLPGL SQTQALGAAS RLCSRINGEP FVVPGQLRPV PVTTSIGLVT
421 VAPAAGAAQL SAGELIAHAD RALYRAKDTG RNRVSLADAA AA
SEQDB ID: 3101377EMD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEEKKTLGW PLRLLLLGSL ALNLLVIGLA AGAMWRYGGD HGHRPPLPMA ATLYRALPEA
61 DRDQLRQHIH GRLDGRKARR AQEMAELAAA LRASPFDPAQ FAALLATHET RRAESHGAMR
121 AALIDRIASM DQGTRAAYAD RIERMRMHGF PRRERN
SEQDB ID: 3101377EME
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKMSDDMSDL DRMLHAARAG RDDLPEALAQ RMLADAAGVQ ASLARPAARP AAVAQDAWRG
61 LLAALGGWRG MGGLATACAA GVWIGVAPPE FLPDPAQLVL GLESETETLG FYDLADFISE
121 EG
SEQDB ID: 3101377EMF
Reference:
3101377
Name: RNA polymerase sigma70 factor, Isotype: ECF family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDGRASTDGP AQAAGPADEA LLALFAQGDP RAARLLTERL GPRAFSVALR VLGNRAEAED
61 VAQEAMLRLW RTAPDWQAGR ARVSTWLYRV VLNLCLDRKR RAKAVDLDAV PEPPDTAPPA
121 LEVLQQAARV DALQAALMHL PDRQRQAVVL RHIEELSNPE IAEIMGIGVE AVESLTARGK
181 RALAGHLAGQ RAALGYEDER
SEQDB ID: 3101377EMG
Reference:
3101377
Name: EF hand domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHAGFIAAL LLGGVALGAS SALAMGPGGG MRHDFSEIDA NGDGKITLEE MQGHRAAMFS
61 GADTDGDGKL SQAEMEAQAM ARAKERVAWM LERHDANKDG ALSQDEIPKP GAGRKAGRMF
121 DKMDSDGDGA ISEQEFSEMQ ARGHGRHGMK AWCDGNRKN
SEQDB ID: 3101377EMH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDQTLCADT DRPTWPAVLT GFRGRCPNCG QGRLLHSYLK VNDQCSECGE EYLHHRADDG
61 PAYLTILLVG HLMAPLLLVV FETWRPAPMT LFSIFALGCV SLSLYLLPRL KGMVVAYQWA
121 RRMHGFDKSR
SEQDB ID: 3101377EMJ
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEQQDKTAI RNAATVIVLR DRLDNPAILM GQRGAKAAFM PNKFVFPGGA VDAEDARVPL
61 ASPLPPVCAD RLTEKAPQSL GHALAVAAVR ELWEETGLIL GRPGDWPGMV PADWQSFAAT
121 GNLPAAEALQ FVFRALTPPG RPRRFDARFF LVDAGAISGD LDDFTHASDE LSHLQWIPLK
181 EARRFDLPFI TEVVLAEVAG RVTDPEPPAS VPYFHNNEEA SLFLRLRGYP MPETG
SEQDB ID: 3101377EMK
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRERLIYLP LGGAGEIGMN AYVYGYGKPG KERLILVDMG VAFSDMDTTP GVDLIWADIS
61 WLRENVDRLE AVFITHAHED HVGAVAHTYD QLRKPIHARA FTANIARRKM SELGLPEQAV
121 QTVSAWPEQV QAGPFTVGFL PVSHSVPESA ALVIDTPAGR IVHSGDFKLD PSPVVGEAFD
181 PELWGSVGKS GVRALVCDST NVFSPNPGRS ESEVGPEIEK LVAGASGMVV ATTFASNVAR
241 VRTLAEAGAR AGRSVVLLGR AMRRMIEASM ETGVLTEFPP VISPEEAQDI PRDHLMLIVT
301 GSQGERRAAS AQLARGKYRG LELAEGDLFL FSSKTIPGNE KEVIRIINQL SEKGVDVVDD
361 SSGRYHVSGH ANRPDLARVH ALIDPQMVIP MHGEHRHLRE HARLAEAGGR QGVVAVNGTM
421 LDLSGNAPKV AAHVETGRTY LDGTVQVGAL DGVIRNRIRM ALNGHVTVTV ILDEEDEPLG
481 EPWCDIMGLP EIGSSKAPLV DVMEEDLNQF LMRSNQKTLR DDDRLEEALR RIARQTAQAE
541 IGKKPEVTVV ISRMR
SEQDB ID: 3101377EML
Reference:
3101377
Name: transcriptional activator, Isotype: baf family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLAIDCGNT NTVFSIWDGE KFLCTLRTST HHARTADAYF TWYSTLIKHY GIETDITDVI
61 ISSTVPRVVF NLRVFADRFF GCRPLVVGKP DCLLPVQPRV DAGTAVGPDR LVNAAAAYDR
121 HGGNKIVVDF GTATTFDVVD DDGAYVGGVI APGVNLSLEA LHMAAAALPH VDIAKPQAVI
181 GTNTVACMQS GVFWGYVGLV KEICARIKGE RDRDMQVIAT GGLAALFQQS EILFDIFEDD
241 LTMHGLTVIH RHNKENGTV
SEQDB ID: 3101377EMM
Reference:
3101377
Name: biotin-Ac-CoA-carboxylase ligase, Class: EC6.3.4.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDWPQGYGK RVLDEVDSTL NEAARIAPTL SGPEWIMARR QTAARGRRGR AWTQAQGNLA
61 ATLVMRPVGE AKQAALRSFV AALALFDACV AVTGRAEGLA LKWPNDVLLN GGKLAGILLE
121 STGHGSGVAH LAIGIGVNLA DAPGADAVEP GAVRPVSLVS ETGAQVEPEL FLTELAAAFA
181 RYETQFLTYG FAPIRSAWLA RAARLGEVIT ARTATSQTVG TFETVDAEGN LVLNTAQGRV
241 SIPAAEVYF
SEQDB ID: 3101377EMN
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: N, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoN
Sequence:
1 MIQADLYIIL PEIVLALYAM AALLGAVYTT KDGMGPALVW ATAALMAVLA IWIATQDSGT
61 RVAFNGMFVD DAFARFAKVA ILLSAGAVLL MSQDYMARRG LLRFEYPLLV ALAAVGMMMM
121 VSAGDLMSLY MGLELQSLAL YVVASLRRDS VKSTEAGLKY FVLGALSSGL LLYGASLVYG
181 YTGTTLFSGI LASAHHGEVS IGLLFGLIFL ISGLAFKVSA VPFHMWTPDV YEGSPTPITA
241 FFATAPKVAA MGLFARLMFD AFGNAVSDWQ QVLVVLSVLS MFLGAVAAIG QRNIKRLMAF
301 SSIAHMGYAL IGLAAGTQAG VQAMLIYMAI YVTMNIGTFA FILMMERDGQ PVVDIDALRQ
361 FSRRDPGKAL AVLILMFSLA GVPPMLGFFA KLGVWQAGID AGLMGLVVAS AIASVIGAFY
421 YLRIVFYMYF GAENEEPIDT RSSPVLWVAL MGSAAMMLVG LFYQFGVEGA AAAAAATLVN
SEQDB ID: 3101377EMP
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: M, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoM
Sequence:
1 MDNILSIVTF IPALAAAILA VFLRGEDAAA QRNAKWVALF ATTVTFLVSI GIYTGFDPAD
61 TGFQMVEEGE WLMGLKYKMG VDGISVLFVL LTTFIMPLTI LASWEVTTRV KEYMIAFLLL
121 ETLMLGVFMA LDLVLFYLFF EAGLIPMFLI IGIWGGKERI YASFKFFLYT FLGSVLMLVA
181 MVSMYVDAGT TDIALLMKHQ FSSESFSLLG VHVLGGAQTL MFLAFFASFA VKMPMWPVHT
241 WLPDAHVQAP TAGSVVLAAI LLKMGGYGFL RFSLPMFPVG AEVMTDLILW LSAIAVVYTS
301 LVAMVQEDMK KLIAYSSVAH MGFVTMGIFA ANQQGVDGAI FQMLSHGFIS AALFLCVGVI
361 YDRMHTRDID AYGGLVNRMP TYARVFMLFT MANVGLPGTS GFIGEFLTLM GTFQKNTWVA
421 AVAASGVIFS AGYALWLYRR VVFGDLIKES LKAITDMTSR ERAIFAPLIV MTILLGVYPA
481 LVTDIIGPST AALISNFDTA LAAAETATQV ASH
SEQDB ID: 3101377EMQ
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: L, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoL
Sequence:
1 METTILFAPL VGAILCGFGW KFIGEKAAMW TATGLLFLAC ALSWIVFLGF DGHTQQIEIL
61 RWIESGSLST SWSIRLDRLT AIMLIVVTTV SALVHLYSFG YMDHDPQWRT GESYKPRFFA
121 YLSFFTFAML MLVTADNLVQ MFFGWEGVGV ASYLLIGFYY RKPSANAAAM KAFIVNRVGD
181 FGFALGIFAL FFLVDSINFS DIFAAVPTLA ETQLTFLWRE WNAAEVIGVL LFIGAMGKSA
241 QLILHTWLPD AMEGPTPVSA LIHAATMVTA GVFLVCRMSP LYEFAPGAAG FITVLGATTA
301 FFAATVGLVQ TDIKRVIAYS TCSQLGYMFV AAGVGMYSAA MFHLFTHAFF KALLFLGAGS
361 VIHAMHHEQD MTNYGALRKK IPYTFWAMMI GTLAITGVGI PLTTIGFAGF LSKDAIIESA
421 YAGGSAYGFW LLVIAAFMTS FYSWRLMFLT FYGEARGDKH THDHAHESPK VMLVPLGVLS
481 LGAVFAGMIW YGNFFGHADQ VGKFYGIPVA EAAAGGQDAA HGASDSDTVT TSEAAHGSDD
541 AGHGGEAAHA VAEGAHHAAF AGAPGDGALY FGPDNHVLDD AHAAPKWVKV SPFIAMVLGL
601 ALAYLFYIVN PELPKRLAAN QRPLYLFLKN KWYFDEIYDA IFVRPALALG RLLWKRGDGG
661 TIDGFLNGVA MGVVPYFTRL AGKAQSGYIF TYAFWMVLGI AALVTWMSIG GGAH
SEQDB ID: 3101377EMR
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: K, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoK
Sequence:
1 MIGLEHYLTV AATLFVIGIF GLFLNRKNVI VLLMSIELML LAVNINLVAF SSFLGDLVGQ
61 VFTLFVLTVA AAEAAIGLAI LVCFFRNRGT IDVEDVNVMK G
SEQDB ID: 3101377EMT
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: J, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoJ
Sequence:
1 MSVFAFYLFA ISAITGGLFT VISRQPVHSV LWLILAFISS AGLFVLLGAE FVAMLLVIVY
61 VGAVAVLFLF VVMMLDVDFA ELKAEMARYM PLALLIGLVI LMQFVMAYGA WETAEGAAGH
121 LAQPMPADRH NTEALGLIIY DQYFLLFQLA GLILLVAMIG AIVLTLRHRQ DVKRQDIVAQ
181 MMRDPAKAME LKDVKPGQGL
SEQDB ID: 3101377EMU
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDMSKLFEQ LIEQSQAMAK AVNPGFENFS PSEAFKGFEA MWPTMPKEVM ELMFGNTVNK
61 DGLDAKTRLL LTLAGLTCQG AQADTAVRQT VRHALEAGAR KQEIVETIGQ MSVFAGIPAM
121 TRALNLAQEV MGDNGDDDQ
SEQDB ID: 3101377EMV
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPVLPDTLS IAPGKTTPPL GTLWLGPRLP RMETMCMLNM VRAGWDVTLF GYQRPENLPS
61 DIPFRDAREV MERDLSDRAV EGARALPGAM AADIFRLHMI RQENMAWVDS DFLPVSNRFP
121 DIRRSFFAVN DNLPANTTMY FAPDDPVLLD YIAAVEDEFP EPQPFYGAQV NARIRELRRT
181 DTPMHRGQMH ARRYSGPFVL RHLLQIHNRT GEALAEDVIF PIQYSNKSQF WDPYEVAARS
241 FSERTWAVHL WGSRIRGQME EREADPGSFL GYFLAEVGMG KPQAKRGVA
SEQDB ID: 3101377EMW
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: I, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoI
Sequence:
1 MTQIDYTRAA KYFLLQDFWV GMKLGLKYFF SPKATINYPH EKGPLSPRFR GEHALRRYPN
61 GEERCIACKL CEAICPAQAI TIDAEPREDG SRRTTRYDID MTKCIYCGFC QEACPVDAIV
121 EGPNFEFATE TREELFYDKE KLLSNGDRWE AEIARNLELD APYR
SEQDB ID: 3101377EMX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDGVDIDLK IEMLSTLQSQ LERACSEGHE SLPLGSIRKD VQINVSDPCA ALETVTKQID
61 ALQQGEREMK K
SEQDB ID: 3101377EMY
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: H, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoH
Sequence:
1 MAEFFDTPGG IALIILAQVL AVVAFVMISL LFLVYGDRKI WAAVQMRRGP NVVGVYGLLQ
61 SVADALKYVV KEVVIPAGAD RTVFILAPMT SFVLAMIAWA VIPFNDGWVL SDINVAILYV
121 FAVSSLEVYG VIMGGWASNS KYPFLGSLRS AAQMISYEVS IGLIIIGVIL STGSMNFGDI
181 VRAQDTGWGF FGWYWLPHFP MVFLFFISAL AETNRPPFDL PEAESELVAG YQVEYSATPF
241 LLFMAGEYIA IFLMCALTSL LFFGGWLSPI PGLPDGVLWM VAKMAFFFFI FAMVKAITPR
301 YRYDQLMRLG WKVFLPFSLV WVVFVAFAAK FDWFWGAFAR WSVGG
SEQDB ID: 3101377EN
Reference:
3101377
Name: murein endopeptidase, Class: EC3.4.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mepA
Sequence:
1 MFFQVIAVFL LALIPVLGAV PAQAEPLAKE LFGAQKSASR QKPAAYGSYA KGCAAGLEQL
61 PETGPTWQAM RLSRNRNWGH PETIDFIRDL SGFAARQKGW SGLYIGDISQ PRGGPMLTGH
121 RSHQLGLDID IWMLQANNLR LSGQHRENIS SISLRRAKGA YVNDNWTRQH HAIMREAARD
181 KRVARIFVFP GAKVWMCNNE KGDRSYLRKI RPWWGHHYHF HVRLSCPRGS RGCVDQTPPP
241 QGDGCAEAQE WVNNILNPPP PKPRDPNAPP PKKRREYVLA DLPKQCASVL RSQ
SEQDB ID: 3101377ENA
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLALISPL ALMACADPAQ DQVSRFAPQY MGVETALLEG DLVQFGVRMS GARSVADLDD
61 YAECAAAQYA LIRGYGFARH LRTNVNEKGG VWAADAVYTI SPSLPRGAKT IDAEVVVAHC
121 AENGIPTV
SEQDB ID: 3101377ENB
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: G, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoG
Sequence:
1 MSDLRKINID GHEIEVEGAM TLIQACEVAG IEVPRFCYHE RLSIAGNCRM CLVEVVGGPP
61 KPAASCAMQV RDLRPGPEGQ PPVVKTNSPM VKKAREGVME FLLINHPLDC PICDQGGECD
121 LQDQAMAYGV DFSRFREAKR AVDDLDLGPL VGTAMTRCIS CTRCVRFTTE VAGITQMGQT
181 GRGEDAEITS YLNQTLDSNL QGNIIDLCPV GALTSKPYAF TARPWELTKT ESIDVMDALG
241 SNIRVDTKGR EVMRILPRNH DGVNEEWISD KTRFVWDGLR RQRLDRPYVR IDGKLKPATW
301 PEALSAAATA MKGKKLAGLI GDLVPVEAAF ALKQLVEGQG GKVECRVDNA RLPIGNRGAY
361 VGTAAIEDID DADMILLIGT NPRDEAPVLN ARIRKAWSRG AEVALIGPAA DLTYDYYHAG
421 TDRQALADMI AEGVSDETRD NKKSLVIVGQ GALREADGLA VLAAAQKMAE ISGSGLLVLH
481 SAAGRVGAMD IGAVTEGGIE AAIDGAEVIY NLGADEVEID AGAFVIYQGS HGDRGAHRAD
541 VILPGAAYTE ENGLFVNTEG RPQLAMRAGF APGEAKENWA ILRALSAELG ATLPFDSLAQ
601 LRQALVAEVP HLAQIDQVPE NAVEALEQGP LGTASFRIAV DDFYLSNPIA RASALMAELS
661 AAAKARRAEK IAAE
SEQDB ID: 3101377ENC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGRLAYPCR SGALLLNNRP GVHRSGSSRP KGHAMLKSIL TAAASLAIAA SAAAAKPPLR
61 EVPEIADGIF TIVVANEIRK NCDEIDGRLF KGIGEIRRLR ARANELGYSD SEIRAVLDSD
121 VEKERFRDRG RQYMAKLGLN YDKPGDLCRL GRLEISNNSA IGALLRAN
SEQDB ID: 3101377END
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNVMSNPTAS RFPQRAALAL LIGAVAATAA CNSTKRENRL LFGGHFFPVK AKPVDKKATL
61 SVFTVTVDKV SQSFDDAREA GRHGGISYCI ANYGSSKIDW QVGPDSEPAQ LRIEGDKMTF
121 QGTCQRP
SEQDB ID: 3101377ENE
Reference:
3101377
Name: NADH-quinone oxidoreductase, Subunit: F, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoF
Sequence:
1 MLKDQDRIFT NLYGMHDRTL KGAMARGHWD GTAGIIGKGR DWIIQQMKDS GLRGRGGAGF
61 PTGLKWSFMP KESDGRPSYL VVNADESEPG TCKDREIMRH DPHTLIEGCL IASFAMNANA
121 CYIYIRGEYI REREALQAAI DEAYDAGLLG KNAAKSGWDF DLYLHHGAGA YICGEETALI
181 ESLEGKKGMP RMKPPFPAGA GLYGCPTTVN NVESIAVVPT ILRRGPEWFA GFGRQNNAGT
241 KLFAISGHVN NPCVVEEAMS ISFEELIETH CGGIRGGWDN LLAVIPGGSS VPCVRGEKMK
301 DAIMDFDYLR GELGSGLGTA AVIVMDKSTD IVKAIWRLSK FYKHESCGQC TPCREGTGWM
361 MRVMDRLVRG EAEPEEIDML WDVTKQVEGH TICALGDAAA WPIQGLIRNF RDEIEDRIKA
421 QKSGRMGAMA AE
SEQDB ID: 3101377ENF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARTGNMDEK LEQVIARKGR HIALVIAVTM VLWLVLSMFI GPALGLPGRY ALLIDFAALA
61 GFIYAVINIF QLWRLRQDSQ R
SEQDB ID: 3101377ENG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTTKDRTAD TARVWKRAAY GGLVVAGVIL VFGQTSVTTA VIAGVVAFAA GGYLGGRMSG
61 AVQEAQERAE LATQTPAEAA PSAPAPMEQA PVEQAPVASA AAEPEPVAAQ AEAAEEMNLV
121 QPSKALPGEA ELAARKGTWR YEGNSATT
SEQDB ID: 3101377ENH
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase 41kD complex, Subunit: I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoE
Sequence:
1 MLRRLHPEQP DSFAFTPANL AWAEAQVTKF PEGRQASAVI PLLWRAQEQE GWLTRPAIEA
61 VADMLGMAYI RVLEVASFYF MFQLQPVGTV AHIQICGTTS CMICGAEDLI AVCKEKIADK
121 PHTLSADGKF SWEEVECLGS CTNAPMAQIG KDYYEDLTAK RFGELLDELA AGKVPVPGPQ
181 NGRYASEPLK GLTSLTEYDS GKTRYNASVQ LATDIGDTVK RIDGTEVPLL TPWIGKDGTV
241 ASRAGKVSPP PAPAAPKPAV KQTPKAEAKP APKPEAEPVL KPSAALPGQE ELAARKGSWR
301 YEAPAAEVAQ ADATGDAGEE QPLTLSAARE GGADDLKLLK GVGPKLEGLL NELGFYHFDQ
361 VAAWTPAQVA WVDARLTFKG RIERDGWIEQ ARQLAAGEET EFAKRAKKDG IYDE
SEQDB ID: 3101377ENJ
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPMRSILTG MGMLAGLAAC EVAPTGEGNT GVITGEMRAD YLDAVASVGC VLRDERQYGA
61 VDFQAGLSRE QTLAITANYL SRGKAERVAD GNTIRINTGP CAA
SEQDB ID: 3101377ENK
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: D, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoD
Sequence:
1 MMDGGKGFED ALTGEQKIRN FNINFGPQHP AAHGVLRMVL ELDGEIVERC DPHIGLLHRG
61 TEKLMESRTY LQNLPYFDRL DYVAPMNQEH AWCLAIEKLT GVEVPRRASL IRVLYSEIGR
121 ILNHLLNVTT QAMDVGALTP PLWGFEEREK LMVFYERACG ARLHAAYFRP GGVHQDLPDA
181 LLDDIEAWSH TFPNVLDDID GLLTENRIFK QRNCDIGVVS EEEILQYGFS GVMVRGSGLA
241 WDLRRAQPYE CYDEFEFQVP VGKNGDCYDR YLCRMEEMRQ SISIIRQAIA KLRDCPGDVL
301 ARGKLTPPKR GDMKTSMESL IHHFKLYTEG FHVPAGEVYA AVEAPKGEFG VYLVADGTNK
361 PYRSKIRAPG YLHLQAMDHV ARGHQLADVA AIIGTMDIVF GEIDR
SEQDB ID: 3101377ENL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTILGELAA LAALGLALAG AAAKAAQAER ARVRAAAKRN ARARR
SEQDB ID: 3101377ENM
Reference:
3101377
Name: NADH-quinone oxidoreductase, Subunit: C, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoC
Sequence:
1 MSDALRELGT HLELKRADCI LSWDVTFGEL NVDVAPSNLV DFVDFLRSDS SCRFSTLVDI
61 TAVDYPERAK RFDVVYHFLS MYQNQRIRLR VSIREDDMVP SITDVHPSAN WFEREVFDMF
121 GILFTGHPDL RRILTDYGFR GYPLRKDFPT TGYTEVRYDE AEKRVVYEPV SLVQEYRQFD
181 FMSPWEGADY ILPGDEKKEG
SEQDB ID: 3101377ENN
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: B, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoB
Sequence:
1 MEERGAGMAV MTGANTAGVD KEVATQALNA ELQDKGFLLT STEDIINWAR TGSLHWMTFG
61 LACCAVEMMH TSMPRYDAER FGIAPRASPR QSDVMIVAGT LTNKMAPALR KVYDQMPEPR
121 YVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL QLQRKIRRTG
181 TIVR
SEQDB ID: 3101377ENP
Reference:
3101377
Name: NADH dehydrogenase, Isotype: I, Subunit: A, Class: EC1.6.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nuoA
Sequence:
1 MEELLREYLP ILVFLAVAAG LGLVLILAAV VLAVRNPDPE KVSAYECGFN AFDDARMKFD
61 VRFYLVSILF IIFDLEIAFL FPWAVGFKDM SDVGFWSMMV FLGVLTIGFA YEWKKGALEW
121 Q
SEQDB ID: 3101377ENQ
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYETITIDTD ARGVATLTLD RAEKHNAMSA QMLADLSAAA AGLAADDAVR VVVLTGAGKS
61 FCAGGDLGWM QAQMAADAET RFVEARKLAE MLQALNSLPK PLIGAVQGNA FGGGVGMASV
121 CDIAIGVDTL KMGLTETRLG IIPATIGPYV IARMGEARAR RVFMSGRLFG AAEAVELGLL
181 ARAVPADGLA AAIEAEVTPY LACAPGAVAS AKALIRDLGP RVDDAVIDRT IRALVDRWET
241 DEAREGIGAF FDKRKPAWNT QV
SEQDB ID: 3101377ENR
Reference:
3101377
Name: hydroxymethylglutaryl-CoA lyase, Class: EC4.1.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mvaB
Sequence:
1 MGDWVEIFEM GPRDGLQNEK REIPVAEKVA LVDCLSRAGF RRIEVASFVS PKWVPQMAGS
61 AEVLSGITRA EGVRYAALTP NMRGYEDALA ARADEIAVFA SASEGFSKAN INASIEESIA
121 RFEPILEAAR HIDLPVRGYV SCVTDCPYDG AVAPEKVAEV ADRLFALGCY EISLGDTIGQ
181 ATPDKIARML LAVRERVPVS RLAGHYHDTA GRALANIDAS LALGVRVFDA AVGGLGGCPY
241 APGAAGNVAT EAVAAHLERL GYQTGLDMDV IAEAADMARA MRTG
SEQDB ID: 3101377ENT
Reference:
3101377
Name: methylcrotonyl-CoA carboxylase, Subunit: alpha, Class: EC6.4.1.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mccA
Sequence:
1 MFDKILIANR GEIACRVMET AQRMGVACVA VYSDADAGAK HVAMADEAVH IGGPAPADSY
61 LKGDVIIAAA LETGAQAIHP GYGFLSENPG FVDAVEAAGL TFIGPSASAI RAMGLKDAAK
121 ALMHEAGVPV VPGYHGDNQD PEHLAGAADT IGYPVLIKAV AGGGGKGMRL VERPQDFAAA
181 LDSARGEAST AFGNDAVLVE KFVSKPRHIE VQVFGDGTHA VHLFERDCSL QRRHQKVIEE
241 APAPGMTEEM RAAMGQAGVR AAEAIGYKGA GTVEFIVDAS DGLRADRFWF MEMNTRLQVE
301 HPVTEAITGV DLVEWQLRVA AGESLPARQE ELSITGHAFE ARLYAEDVPK GFLPATGTLS
361 HLAFPEGCRA DSGVRAGDTI SPWYDPMISK VIVHGPTRAV ALSRLDRALA GTQVGGTVTN
421 LAFLGALTRH AGFAAGDVDT GLIGRDIDAL VAAPAPEPRH VAAAAMAVLG LAGDQAEQGF
481 TLWAPLHRAI TLGWQGEELA VDVQVEGRNR QLWQVGADQV VAERHDGRWR IGGRAMPDVS
541 VAGGVATVFD GYGLPFDIID PLERDSSAGG DTNVVLAPMP GLVKAVFAAA GQAVQEGDRL
601 AILEAMKMEH SLLAARDGVV AEVLAEAGAQ VEAGAALVRL VEEEA
SEQDB ID: 3101377ENU
Reference:
3101377
Name: thermonuclease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVGFSVARK GRVLPYSRGY RKTPKLDMGL LPKKRRRSPL DPRVYLRAVM VAAAAGLVLL
61 QLLPDSAIAV RQIVQSDECR IVSVTDGDTV RIWCPSRGVQ KVRLLGFDTP EVFSSSCLSE
121 LARGTAATWY LRYVLLTSSE TTIVLQGSDR YQRRLAQVFV DGKRLSTLMI NAGHARPYSG
181 GKRSEWCG
SEQDB ID: 3101377ENV
Reference:
3101377
Name: methylcrotonyl-CoA carboxylase, Subunit: beta, Class: EC6.4.1.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mccB
Sequence:
1 MKLTSKAMPA SEGFKANRAA HLDALAQIGA AAEAARLGGG EKSRARHESR GKMLPRRRVA
61 NLLDAGSPFL EIGATAAFDM YDNAAPAAGV VAGIGRVEGQ EVMVVCNDAT VKGGTYYPMT
121 VKKHLRAQEI AEENNLPCIY LVDSGGANLP NQDEVFPDRD HFGRIFYNQA RMSAKGIPQI
181 AVVMGSCTAG GAYVPAMSDV TIIVKEQGTI FLAGPPLVKA ATGEVVSAED LGGGDVHTRL
241 SGVADYLAED DAHALALARR AVRSLNRRKP LTVDWASPEE PAYDPEEILG VVPADLKTPY
301 DIREVIARLV DGSRFDEFKP RFGETIVCGF AHLKGCPIGI IANNGVIFSE AAQKAAHFVE
361 LCSQRKIPLV FLQNITGFMV GRKYENEGIA RHGAKMVTAV ATTAVPKITM LVGGSFGAGN
421 YGMAGRAYQP RFLWTWPNSR ISVMGGEQAA GVLATVKRDG IERQGGSWSA EEEAEFKRPT
481 LEMFERQSHP LYASARLWDD GIIDPRKSRD VLALSLSAAL NAPIEDTRFG VFRM
SEQDB ID: 3101377ENW
Reference:
3101377
Name: Ac-CoA synthetase, Class: EC6.2.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acsA
Sequence:
1 MTFAARIPGL RPDGGWDLPE RLNMARQCLS QPAGALAIID LTGPARRDIT HGDLSGMVQG
61 LARALLPRVA PGDRVGVLLS QSPWCAAAHL ALWHIGAISV PLFKLFQQDA LRSRLEDAGA
121 RLVLTDAEGA TLLGDLATPL MAAEIGLPGE PVPQADTRPE DPAVLIYTSG TTGRAKGALH
181 GHRVLTGHLP GVSISHNHLR PGDCLWTPAD WAWIGGLFDV LMPGLALGIP VVAARLDKFS
241 AEACADVIAQ GGVRNVFFPP TALRMLKAAD QALPGLRSVA SGGEPLGAEM LAWGEGAFGL
301 TINEFYGQTE CNMTVSSCAA DFPVRPGCIG KPVPGHEVAV IDDTGQPTRG EGDVAVRRGS
361 ASMLLEYWRN PAATAEKFRG DWLVTGDRGV WEGDYLRFVG REDDVITSAG YRIGPAEIED
421 CLLTHPGVAT VGVVGKPDPL RTEIVKAYVV MKPGARASEE ELQTWVKDRL AQYSYPREVA
481 FLDALPMTVT GKVIRKELKR RAAAELEANP
SEQDB ID: 3101377ENX
Reference:
3101377
Name: outer membrane protein, Isotype: OmpW
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ompW
Sequence:
1 MTRMAAALAL STALATLAGP LAAQSQGDWT VGLGVGYVNP KSNNGTMAGG IATVDDNTRP
61 IFTVEYFIRD NLGIELLAAT PFKHDVSISG IGYAGNVKHL PPTLSLNYHF PTNSAWKPYL
121 GVGVNYTTFF EENSPLGTLK LDDSFGVAVN AGVDYQISDR GALRLNARWI NIESDATLNG
181 AAIGTAEIDP LVIGIQYVHR F
SEQDB ID: 3101377ENY
Reference:
3101377
Name: isovaleryl-CoA dehydrogenase, Class: EC1.3.99.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ivD
Sequence:
1 MFAATMQFDL GEDVNALRDM VHRWAQERVR PMAAEIDQTN EFPNELWREM GDLGLLGITV
61 PEEFGGAGMS YLAHVVAVEE IARASASVSL SYGAHSNLCV NQIKLNGNDE QKRKYLPGLV
121 SGEHVGALAM SEAGAGSDVV SMKLRAEKRN DHYRLNGNKY WITNGPDADT LVVYAKTDPE
181 AGSKGITAFL IEKSMKGFST SKHFDKMGMR GSNTAELVFE DVEVPFENVL GQEGRGVAVL
241 MSGLDYERVV LAGIGTGIMA ACLDEIMPYM AERKQFGKPI GSFQLMQGKI ADMYTAMNSA
301 RAYIYEVAKA CDRGDVTRQD AAACCLYASE QAMVQAHQAV QAMGGAGFLS DSAVSRIFRD
361 AKLMEIGAGT SEIRRMLIGR ELMNTVL
SEQDB ID: 3101377EP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLRLALAIA AALVLSGPGL AVDRGEAQHL GSFTWRGSQP WFGGFSAIEM TPDGMGMTVL
61 SDRATILTAR LRRDGDQIIG VEIDAVHKVR SSKNKVLKGR VGDSEGLAIG PDGVIYISFE
121 GVARVARYAR PDAPAVVLPR PDAFRHMARN GAFEGLAMDA RGRLYTLPES SRAADGSIPV
181 YRWDGRAWST AFHLEQLGGF LPVAADFGPD GRFYVLERDT GAIGFRSRLR RWNVTAKGIT
241 GEEILFQSRL AAHDNLEGMS VWRDGQGRLR ATMVSDDNFL MLQRTELVEY LLPD
SEQDB ID: 3101377EPA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRRKAAKAP FRKGRRLCCY GSYAGIVDGW GKRWYRGY
SEQDB ID: 3101377EPB
Reference:
3101377
Name: aminotransferase, Isotype: DegT/DnrJ/EryC1/StrS-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEIFSGSFT QQEPIPDEAI EAALAVLRHG RLHRYNLAKG ELGETALLEQ EFAAQTGARY
61 CLAVASGGYA LATALRAVGV KPGDAVLTNA FTLAPVPGAI ASVGARPVFV GVTESLTIDL
121 DDLAAKAGVA RVLMLSHMRG HLCDMDRLMQ ICDAAGITVI EDCAHTMGAA WNGVPSGRQG
181 AVGCYSCQTY KHVNSGEGGL LVTDDEEIAA RAVMMSGSYM LYERHLAAPG PEVFERIKYH
241 TPNISGRMDN LRAAILRPQL RALATQVARW NERYQRIEAG LRGTPGLSVI ERPDVETYVG
301 SSIQFLLLDW VAEKVQEALR RCAARGVELK WFGTPEPVGF TSRYDSWRYA DSAPMPASDR
361 VLAGIIDMRV PLTFSLEDCD LIARIIRAEV GAVYQS
SEQDB ID: 3101377EPC
Reference:
3101377
Name: phosphoglycolate phosphatase, Class: EC3.1.3.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gph-2
Sequence:
1 MRTVIFDLDG TLADTSGDLL AAANHCFRDM GLGDVLVPGQ DAGIALRGGR MMLTRGLERV
61 GAYDAATVER YYPVLLEAYR GAIDHHSFLY PGAMDAVEEL RRAGYGVGIC TNKPEALADL
121 LLQRLGVRDA FAALIGADTL PVRKPDPEPL RAAARAAGGD PAACVLVGDS DTDRNTARAA
181 GVPSILVTFG PSGDDMAALE PEALLERFED LPHVVTRLIG
SEQDB ID: 3101377EPD
Reference:
3101377
Name: UDP-GlcNAc pyrophosphorylase, Class: EC2.7.7.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glmU
Sequence:
1 MSTALVILAA GKGTRMKSDL PKVLHPIAHA PMLVHAMRAG AVLEPARTVI VAGHGAEAVR
61 AAALDEDEGA TVVLQEEQLG TAHAVDQARA ALEGFEGDVV VLYGDTPFLQ PDTLERMLAA
121 RKTHDLVILG FEAADPARYG RLVMQGDSLE RIVEFKEATE QERAIRFCNS GLLACNAETL
181 FALIAAVGNN NASGEYYLTD VVEIARKQGL AVTAVACDEA QTLGVNSRAD LAAADAIFQT
241 RARAELLDLG VTLMAPETVY LAADTVIGRD TVIEPNVVFG PGVTVESGAT IRAFSHLEGC
301 HVSRGAVVGP YARLRPGAEL AENARIGNFV EIKNAEIGEG AKVNHLTYIG DASIGAGSNI
361 GAGTITCNYD GVMKHRTTIG ANVFIGSNTM LVAPVTLGDG AMTATGTVVT RDVEPDALAK
421 ARVKQENKPD RARKLFEMLR AKKASKQKET
SEQDB ID: 3101377EPE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTSYLDQIR AHADAERAVE MAAYHKVART YLGVANPVLN DLSRDWRRAL DLPDRLALAD
61 ALWQSDIHEA RVTAAKLLTQ ARIRPDVAVW DLLQGWLPDF DAWAIADHAA MAMQKRLVAD
121 PARLDQVEHW TRSDHMWTRR AALVATLPWA KMSNPKPADT AARDRILGWA AGYVPDRDWF
181 IQKAVAWWLR DHSKHDPEAV RVFLAEHGPA MKAFARKEAG KYLKTQLE
SEQDB ID: 3101377EPF
Reference:
3101377
Name: Mo cofactor biosynthesis protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPLIDPFA RAITYLRVSV TDRCDFRCVY CMSENMTFLP KKDLLTLEEL DRMCSTFVRM
61 GVEKLRITGG EPLVRRDIMT FFNGMTRHLE SGALKELTLT TNGSQLERFA DQLYAAGVRR
121 VNVSLDTLDD QKFADITRWG RLPQVLRGID AAQRAGLRIK INAVALKGFN EEELPRITQW
181 CAERDMDLTW IEVMPMGDIG NENRLGQFWS LKDVRAEYEN HYRVTDLSER TGGPARYVRL
241 EETGQKIGFI TPLSHNFCES CNRVRLTCTG ELYMCLGQED MADLRKPLRD HPGSEEPLEQ
301 AIRAAIGLKP KGHDFDYSRQ QVDGRMSRHM SHTGG
SEQDB ID: 3101377EPG
Reference:
3101377
Name: 3-deoxy-D-manno-octulosonic acid transferase, Class: EC2.-.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kdtA
Sequence:
1 MSGPGLTPTP LYHLYRAASA VLVPFVWRTV RKKLSRADVP LERQHERLGH ASQPRPAGQL
61 VWFHAASVGE SLSVLRLITR MGERMPNLEF LITSGTPTSA DLIARRMPPR CRHQFAPLDG
121 PGPVARFYRH WRPDAAVFVE SELWPRMIVE GARAGVPLAL LNARLSEKSV RGWQRFPDTA
181 RFLLDRFRLF LTQNQQTADN LIAMGADPAR VTPGTNLKAM AGPLPVDTAL LAEMRAAIGA
241 RPVWVASSTH PGEEEVVLEA HRQLLADHSD RLLLLIPRHP ERGAEVSALV TAAGLSVARR
301 SSGESITSGT QVYLADTLGE TGTWYAFCPL VFLGGSLREI GGHNPFEPAQ AGAAVITGPG
361 YFNFAETYLP LIASGGAVEV TTAATLADAV RHWLDDAEAF DTARTQARAL VAAQETALEG
421 VIDTLTTRLE LG
SEQDB ID: 3101377EPH
Reference:
3101377
Name: lipopolysaccharide core biosynthesis mannosyltransferase, Class: EC2.4.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpcC
Sequence:
1 MPDLFVTNFN RNFTGVSATA ANVIRQQVAT HDLALVGHAL PGCPAPISAR AARALSRTPP
61 PGKPFAIWHV RRNPEMQTAI WARDVLRLPI RIVFTSAAIR RHSAFPRWLI SRMDAVVATS
121 DAAASFVPHV RAVVPHGVDT DRFTPAPDRP AAWAAQGYGG SFGIATIGRV RPEKGTDLFV
181 EAMLRLLPDM PGAVALVVGR ATKEHQKFAL TLKDKVQRAG MIDRIRFIDE VPPDRLPDLM
241 RALSLVVQLP RYEGYGMVPL EAMASGVPFV GSDTGFFREF SAQGRAGRVV PLENAGLGAE
301 AARALLADED VHGAAALAAR EIAVESFSAA REAAGIEAVY QQLWSQAAPG A
SEQDB ID: 3101377EPJ
Reference:
3101377
Name: bmp family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MREKIDCSVK KCSASRKKQE RIMKNTSITR RVMLAAAVAA SALMTAGAAA AEKVKVAAIY
61 TLPVEQQWIS RIHKALNTAA DRGDIVYAFS ENVANTDYER VMREYAEQGV QLIVGEVFGL
121 ERAARKVAKD YPDTAFLMGS SFGPVAPNFS VFDNWIHEPS YLTGMVAGAA TESNVIGMVG
181 GYAIPEVNRL MHAFMDGARS VNPDVRFIVN FIDSWYDPPK AKESAFAMMD AGADVMYAER
241 FGVSDAAVER GVKAVGNVID TSGDYPGTIV ASALWHMEAT IDKAIANVAG GSFEAADYGQ
301 YSFMAYGGGS LVLDESLVAP ETVAAVRAKE AEILDGLFRV NVNDDRPVSD N
SEQDB ID: 3101377EPK
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRTVLRLN GLSKRFGPVV ANDDVSLSLA RGEVLALLGE NGAGKTTLMN MLFGHYLPDA
61 GTVEVADEAG QLAPLPLGHP QAALAAGVGM VHQHFTLAEN LNALDNITLG AEPLRAIRRD
121 RRGARTRIEA IMAHSGLKAP LNVPVGRLSV GERQRVEILK ALYRDARILV LDEPTAVLTP
181 QEADTLFASI KAMTAEGLSV IFISHKLREV LAFSDRIAVL RHGRKVGEMA TSAADEAAIA
241 RMMVGADTPR IARSAMAPGA PVLHLQGVSV AGRSQRDSLK QANLTVHAHE ILGVAGISGN
301 GQSALANVIS GLAVPAAGHI RVDGSEIPRP SPARMVRAGV GRIPEDRHHE GIVGAMSVAE
361 NMVIERLDDT QVQSRGLLRR EAIAAHADEL ARAYDVRGPG VTAPARLLSG GNIQKLILAR
421 VFERAPRLIL ANQPTRGLDM GAAAEVGRRL LEARERGAGI VLISEDLDEI LGLADRVVVI
481 RDGQIVETGS HDRERIGLMM AGEAA
SEQDB ID: 3101377EPL
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRIEPRANR SRAMDLGIPV LSAVIALAFA AIPLLAAGAN PITAYGEMVK GVFGSVFAVS
61 EMLTRATPLI FTGLAAALAF RAKLWNIGAE GQLYLGAMAA VAVGAGWLDL PGLLLVPLIV
121 ILGASAGAAG MAVPTYLKSR FGADEVVTTL LLNFIILIFL QMMLEGPLKD PMGLGWPQSA
181 PILDQGMLPP LMERMRVHSG LILALVLAGV AQFMLARSVW GFRLRAVGEN AAAARHAGIN
241 VKRSLFGVAI ISGGLAGLAG VSEVAGLKGY LTADLSPGFG YTGIVVAMLA GLSPVGVVIA
301 ALFIASVFVG ADSMSRAMGV SSFLADLVVS MSLLCVLVGG FIARYRIIRS GTGRAAS
SEQDB ID: 3101377EPM
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMDLLNILMS ESFWAASLRI ATPLIFGVLG ALICERAGVL NLGIEGIFVV GAMCGWMAVW
61 LGAGLWGGVL VAALAGAFFG LLHAILTVPL GLSQHVSGLG ITLFATSVSY FTYRTALPNV
121 SSPPRIEPFQ PLDLPILSDL PFLGPVLFQQ TALTWLAIAM VGLVWYVLNR TALGVAIQAV
181 GDNPDSVDAQ GLSVYGLRIG AIVAGSALMA LGGAFLTMSA FDAFFFGMVN GRGWVCIALV
241 IFASWRPGKA LLGALLFGAF DALQVRLQTE MGALVPGQVF LMAPYILSII ALVIAARSAD
301 YPRALLQPWF KGQR
SEQDB ID: 3101377EPN
Reference:
3101377
Name: cytosine deaminase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFDLIVKNAN LPDGQRGVDI ACKDGLIAAV EPGITAEAGT VIEAGGNLVS PPFVDPHFHM
61 DATLSLGTPR MNVSGTLLEG IALWGELKPI QSVDDIIARA LRYCDLAVAK GIGAIRSHVD
121 TCDDELKGVQ ALLEVRERVK DRLDLQLVAF PQDGVLRDPT AMANTVRALD MGVDVVGGIP
181 HFERTMADGA ESVRLLCEIA AERGLMVDMH CDESDDPLSR HIETLAYETQ RLGLQGRVAG
241 SHLTSMHSMD NYYVSKLIPL MVEAGVHAIP NPLINIMLQG RHDSYPKRRG QTRVRELRDA
301 GITVGFGSDC VMDPWYSLGR ACMLDVAFMG LHVGQLSSRA DMDWCFDAVT ENSARIMGLA
361 GYGLGKGCHA NFVLLQARDR IEAIRLRAHR LATIRKGAVI CRSAPVTHEL AGAGGWSGLD
421 ETTFAPPQSG
SEQDB ID: 3101377EPP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRLDHLTVI APTLAEGVAH VRDCLDLDVP FGTRHLYMGT HNHRLQLGDR VYLEIVAVDP
61 AGHAPERARW FGLDDRARVR ADWDAGRRLR GWVASTDEMG LVLSAHRRVF GSEVGLPPQN
121 PEFGFSIPQD GSLPLDGAAP SFIDHRGDPT RMEEIPDLGA RLMSFHLTHP DPVGIEQLYQ
181 ALAIERAPSV TQGPDLRYRA QIAVPGGLKL LT
SEQDB ID: 3101377EPQ
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVKNRFAEL QSEITEWRRD IHENPEILFE THRTSALVAE KLQEFGCDEV VTGIGRTGVV
61 GIIKGKSDSK GKVIGLRADM DALPIHEQTG LDYASKTPNA MHACGHDGHT AMLLGAAKYL
121 SETRNFDGTV VVIFQPAEEG GGGGREMCED GMMDRWNIQE VYGMHNWPGA PVGSFAIRPG
181 AFFAATDQFD ITFEGRGGHA AKPHDTIDTT VMTAQAVLAL QTIASRNADP IDQVVVSVTS
241 FETSSKAFNV IPQRVQIKGT VRTMSKEMRD LAEKRIHEIC AGIAATFGGT ADIRYIRGYP
301 VMVNSDEQTE FAAKVARDVS GGCDEAALVM GGEDFAYMLE ERPGAYILVG NGDTAMVHHP
361 EYNFNDEAIP AGCSWWAGIV EQRMPAA
SEQDB ID: 3101377EPR
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVRNRFAEL QDQIAEWRRD IHAHPEIRFE ERRTSALVAE RLRAFGCDVV ETGVGQTGVV
61 GVIQGRATGS GRVMAFRADM DALPIAEATG LPHASTHPGK MHACGHDGHT AMLLGAAQYL
121 AETRNFDGTV VLLFQPAEEG GGGAKAMLAD GVMDRHGVSE VYGLHNWPGL PAGQFALREG
181 PMMAATDFFE IKVQGRGGHG AMPHLTADAT LAAAQLTVAL QQVVARNVDP LKPAVLSVCS
241 LRTDSDAHNV IADSALIKGT VRYLHPEVQA LIRARIAEVA RATAEAHGAT VELKYMQLVP
301 VTSNPATGAA HAAEAARAVT GQAPLEIDPV MGGEDFADML AERPGAFIFL GNGDSADLHH
361 PAYEFNDAAI PAGCSWFATL AEQRMPLNP
SEQDB ID: 3101377EPT
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIKNRLAEM QDEIAGWRRD IHQHPEILYE THRTSAMVAD KLRSFGCDEV VTGIGRTGVV
61 GVIRGKTDTA GRVVGLRADM DALPMQEQTG LAHASTIPGA MHACGHDGHT AMLLGAAKYL
121 AETRNFDGSV VVIFQPAEEG GNGAEAMVKD GLMDRFGVQE VYAMHNNPGL AAGQFKIRPG
181 PLLAAADTFE IHLEGRGGHA AKPHDTVDTT VMLSQMIVAL QTVVSRNTDP ILQAVLSVTS
241 VETSSKAFNV IPQAATIRGT VRTHSGDMRD LIEQRLSEVV QGVATTFGGK ADVNYERGVP
301 VTVNAEEPTR FAAEVATVVS GGCGEARMVM GGEDFSFMLE ARPGAFIMIG NGDSAGLHHP
361 EYDFNDEIIP AGCSWFAEMV ERRMPAA
SEQDB ID: 3101377EPU
Reference:
3101377
Name: amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIKNRLADM KEEITGWRRH LHAHPELMFD VHQTAAFVAE RLREFGVDDI TTGIGRTGVV
61 ATIKGKTDTA GRVIGLRADM DALPIIEATG LDYASTVPGK MHACGHDGHT AMLLGAAKYL
121 AETRNFDGTA VLIFQPAEEG GAGGREMCED GMMDRWNIQE VYGMHNAPGL PVGQFAIRPG
181 ALLASSDEFE IMVTGKGGHA AAPHDAIDTT LVASQIVVSL HSIVSRNVDP IKRVVLTVGT
241 FETDSVASNI IAHTARLCGT VRTLDPEYRA LAEARVRRVA EDIASAYGAT AQVIWTPGYP
301 ATINSEAETQ YAAEAALAVS GAVDDAVDPI MPSEDFAYML EERPGAYIFL GNGDTAQCHH
361 PAYNFDDEAI PAGSSWYAEM VERRMPAR
SEQDB ID: 3101377EPV
Reference:
3101377
Name: Ac-Orn deacetylase, Class: EC3.5.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argE-1
Sequence:
1 MTERLSPVEI MGALVAFPTV SRDTNLPLVD WVETYLAGHG ITAHRWVDPE QPHKAALFAH
61 VGPWEEGAVV LSGHTDVVPV DGQPWDSDPF TVVERDGKYF GRGTCDMKGF DALAIWALVE
121 GRYRDLKRPL QLALSFDEEV GCTGAPPMIV EMQNHLPKGS AVIVGEPSMM QAVTGHKGGF
181 GYDTRVLGFE VHSSIMHTGV NAIMAAAPLI DWANHRNAEN RAATPSALAA MFDPPWTTCH
241 VGMISGGTAH NITAKECRFA MDFRIVPGEA KERWRDAYFA VAREVEAQMQ AVHPEARIDL
301 SEQFHVPPLV PEQEGEAEML VRALTGDNAG HVVSYGTEAG QFQEAGYSAV ICGPGDIAQA
361 HQPNEFITVA QFDAGHGFMA RLLDRLSE
SEQDB ID: 3101377EPW
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDQPIAQIK KLRVEFQTKD GPVVGVEDVS FEINPGETVC IVGESGSGKS VSSLSLMRLV
61 EFGGGDIAGG QLLFDRRDGG ELDLATADQD YMRNIRGNEI GMIFQEPMTA LNPVFTVGRQ
121 LTEGLRVHKG MNQSQAEERA LELLRQVRIP EPERRLKQYP HELSGGMRQR VVIAMAMACE
181 PRLLIADEPT TALDVTIQAE ILALMDRLKR ETGTAVMFIT HDMAVVAQMA DRVVVMFRGN
241 KVEEGTVEEI FENPQHEYTK ALLAAVPKLG EMHGKAAPEP MKLMGVADQR IEPIIGTESP
301 LLTVKGLTTR FPVKGGFFRR TVANVHAVED VSFTLNKGQT LSLVGESGCG KSSAGRSILR
361 LVEPMAGEID LDGVDIMQLD QSGLRKARLD MQMIFQDPFA SLNPQMQLLE QVAEPMRNYG
421 VASGSELVDR VASLFDRVQL PRSFMRRYPH EMSGGQRQRI AIARALALNP KLIVADEAVS
481 ALDVSVQAQV LNLMMELQAD LGLSYLFISH DMAVVERVSH HVGVMYLGRI VELGSRVRVF
541 ENPQHPYTQA LMKAVPIADP RRRKSEKDLN FKPIPSPIHP IGYEPEPSRY IEVEPGHYVL
601 DGEWAGYTVD RDAIHAGQGG H
SEQDB ID: 3101377EPX
Reference:
3101377
Name: peptide/opine/Ni uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNKECSMKL KTLLMGAIAS AALAPAAFAE RGSDGNVSII YWQAPSILNP FLSGGTKDVE
61 SASLVIEPLA RYDENGGMVP FLATEIPTVE NGGVSADLTS ITWKIAPGIK WSDGSAFTAH
121 DVKFTADYCM HPEGGCAQLT KFEGVTSVEA LDDMTVKVTF DKPTPFPYGP FVGGESPIIQ
181 KAQFENCMGA KAPECTTENF GPIGTGPFVV TEFKPNDVIT MKANDNYRDP AKPAFATLTF
241 KGGGDATAAG RAVMETGEFD YAWNLQLAPE VIQQMQAGGK GTPVAGFGPL VERIMLNQTN
301 PSPALPEGER STAKHPHPFL QDPAVYKAMS MAIDRPLLVE IGYGQAGKVT CNWVPAPAAV
361 NSDTFTCDTQ DIEGAKKLLD DAGIVDTNGD GVREKDGVPL KVVYQTSTNA VRQDFQALIK
421 EWWAEIGIES ELRNINASVF FGGDPGSPDT FQKFYADVEM YANTFNGTDP QSYLANGLCD
481 KAPKPESQWQ GENISRFCNE EYDALHAELT KTAGAEARAE IAKRLNDIMV ENGGMIPLVH
541 RGRLSAHSNT LGGVVLNVWD SELWNAADWY RIK
SEQDB ID: 3101377EPY
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTFTIRRLV LAVPTLLFIS LVIFLLLELA PGDPMAQVPL TVPPEVKEKM REALGLGQPM
61 HIRFWKWIVQ FFWIEPQVLI DHYFGTAFSE GKLRVISWQT RSPVMDIVVQ RIPQTLWVVG
121 TAYLVAIIIA LPIGIYSAYR QYSWFDQLGT FVSMVGFSVP PFFSGVLVIV IFSVQLGWFP
181 SIYDTTHVVN SWDSFVYQLK QMIMPVMVLA LQITAQLSRF MRASMLDNLN QDYVRTARAK
241 GLSEYVVVMV HVLRNSMIPV VTVIALGIPS IFGGAIITEQ VFKVNGIGQL LIGALQANDL
301 PMVQTLTFIF AVLIVLFNLI ADVLYGILDP RIRYD
SEQDB ID: 3101377EQ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRAKRPACP RSRRTKSPHP CQNGPRNMTR AFLPGILAMA AIVVASNILV QFLILDGLLT
61 WGAFTYPLAF LVTDVMNRVY GAEAARRVVF AGFVTGVICS LIGSQIVLQG DGYTYAAVPL
121 RIAVASGSAF LIAQLTDVAV FNRFRGGRWW RAPLVSTLIG SALDTALFFT IAFSASITLF
181 GPDADTAVNW AWEAVPFMNK GAPMPLWVTL AFADWLVKLS LALIALVPFR VIVQRLAPAR
241 ATA
SEQDB ID: 3101377EQA
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPGSAMTEL SQPQPTNPPR SQWLDVWDQF RQHRGAMMGA TLFFLIVAAV YLGPYLWDLD
61 PTKTAIRERN QGPSLAHPFG TDQLGRDLLA RMMAGGATSV SVGITAMLLS LFLGSFVGVL
121 AGFFRKLDGP LMRLTDLFLA LPLLPLLLVM MLLFREPLNA AFGLERGIFI LIVSAIGITS
181 WMPTARIVRG DVLALKEREF VLAARSIGTT NTRLITRHIL PNVLSPIMVS ATLGIATAII
241 TESALSFLGL GFPPDFPTWG RLLFDGVDYL QQFPERVIWP GLAISLTVLS VNYLGDGLRD
301 ALDPRIRGR
SEQDB ID: 3101377EQB
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFESLGFEET TAKEISVLLG LSLGVLFGLL AERTRFCFRR AVVGEDARQA AGVWFTALAV
61 AILGTQASVA SGLIGFADHR LLSSDLPVLA VVLGGLMFGA GMVLTRGCIS RLTVLGGTGN
121 LRALTVLLVF AVVAHAMLKG VLAPLRTSLG AVTVDLGETV SLAALPGGAA LWTALLALAS
181 LLIAARSGNR ALPLLGAALI GLLVPLGWVG TGYVLFDEFD PITMESLSFT APAADTLFYT
241 IASTSIAPGF GTGLVGGVLL GALAAALLFG SFRWQSFDSP RQTGRYLAGA TLMGMGGVLA
301 GGCTLGAGLA GIPTLSLAAL LALTAIALGA RLTDAALNAA SSGSAGYPAT PGQQPAE
SEQDB ID: 3101377EQC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPIQDHPLR FALANELHAR PFPISRAPCT VAYLAVKQPD AAVGRDRKAD RAHLIDLLDR
61 HGAPHPQPGA THYAGQIGRH WLKWESHTEF VTYTAFATGV SDRPFNPADF EVFPPDWLAA
121 APGQRVTSAL LRVEEQLPEA DIVAALADWF VPESLAVAHV LDRAAVAAGD FRIDPAGHMR
181 FAVFVAPDTG ERRIGRIIQR LCEIETYKAM SMLGFARVKA LGPKLGELDS GLTGLMVKMT
241 DGGHPAEDLL PQLLSTSAEL ETMAARSEFR LGATGAYEAI VNQRIASLRE ERFGGRQTFA
301 DFMLRRYEPA MRTVKSTERR LKRLSDRAIR AGDLLRTRVD VERSAQNQAL LESMDRRADL
361 ALRLQHTVEG LSVVAVSYYA VSLVSAFLLP LSEWYGVDKK ALIALVTLPV VGLVWLGIRR
421 IRKKLH
SEQDB ID: 3101377EQD
Reference:
3101377
Name: NAD(P) transhydrogenase, Subunit: beta, Class: EC1.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pntB
Sequence:
1 MEFGFTTAAY VVAAVLFILS LGGLSGQESA KRAVWYGIAG MALAVFATLI GPGSGLWLLS
61 LILIAAGGII GTYVAKRVQM TEMPQLVAAM HSLVGLAAVF VGFNAHFELG NVLSMTEEAR
121 HGLEGFAALL AHKSPVEQNI LRVELFLGIF IGAVTFTGSV VAYGKLAGKV TSAATKLPGG
181 HMLNAGAAAL SLICLIWYFN SGGFLPLLIM TLAAFFIGYH LIMGIGGADM PVVVSMLNSY
241 SGWAAAAIGF SLGNDLLIVV GALVGSSGAI LSYIMCKAMN RSFISVILGG FGGTTGPAME
301 VEGEQIAIDA EGVAAALNDA DSVVIIPGYG MAVAQAQQSV SELTRKLRAK GKNVRFAIHP
361 VAGRLPGHMN VLLAEAKVPY DIVLEMDEIN EDFPDTDVAI VIGSNDIVNP AAQEDPNSPI
421 AGMPVLECWK AKQVFVSKRG QGTGYSGIEN PLFYKENTRM FYGDAKQSLD KLLPMID
SEQDB ID: 3101377EQE
Reference:
3101377
Name: NAD(P) transhydrogenase, Subunit: alpha, Class: EC1.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pntA
Sequence:
1 MKIGTPKEIF EGENRVAMTP DSAVQLQKLG YDCAIESGAG AAAGFSDALY EAAGVEIIKT
61 AAALWKEVDI VAKVRQPDAT ELKRLSKGKT LISFFNPAGN EDGMAAAKSK GANVIAMEMV
121 PRISRAQKMD ALSSMANIAG YRAVIEAGNN FGRFFTGQVT AAGKVPPAKV LIVGAGVAGL
181 AAIGTSTSLG AITYAFDVRP EVAEQVESMG AEFVYLDFEE EQQDGAATGG YASVSSPEFA
241 AAQLAKFREL APEMDIVITT ALIPNREAPE LWTEDMVAAM KPGSVIVDLA AEKGGNCKLT
301 VKDEKIVTEN GVTIIGYTDF PSRMAAQAST LYATNIRHMM TDLTPEKDGQ INHNMEDDVI
361 RGATVTFEGD ITFPPPPPKV QAIAAKSKEK PKELTPEEKR AQEVAAFKAQ TKNQVTLLTV
421 GGLLLLLVGL VAPASFMQHF IVFVLAVFVG FQVIWNVSHS LHTPLMAVTN AISSIIILGA
481 LMQIGSGSFL VILLAGLSVF MAGINIFGGF LVTRRMLAMF QKS
SEQDB ID: 3101377EQF
Reference:
3101377
Name: Cys(isoprenyl) carboxyl methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHRVDLPPVW LAAFIAVAWS QQRYFSFGLS LDGGLSDLIA GLLIGGGVLL MLLAVVELRR
61 HHTTIIPHRD PAAMVQSGIY KRSRNPIYLG DVLFLAGVIL HLDAVLSLVL VPVFVWLLEK
121 RFIVPEENRL RRQFRADFAR YTQKTRRWI
SEQDB ID: 3101377EQG
Reference:
3101377
Name: soxH-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRFLATTLI LTAAAAAASE DIADQYPQSE LYSKPVEVIP HVFSAIGATA PPTYENAGHN
61 NNLSFIVTDE GVVVINAGAS ARLAAALHDE IKQVTDQPVV LVINENGQGH AMLGNSYWRD
121 LGVDVLAHVD AVEETTQNGD FILMGMERYN RDRAEGTRVE HANVTFEDRY DLTLGGVSIE
181 VMHMGPAHDP GDIQVWIPEW KILIAGDIAF HERMLPIFEH TCTSCWLETW ETRMEPLAPT
241 YVIPGHGHPT NLDQVRRYTY DYLVDLREKI GAHIEEGGDL AGAYYVDQER WRNLDTFEEL
301 ATKNAGRVFA EMEWE
SEQDB ID: 3101377EQH
Reference:
3101377
Name: D-beta-hydroxybutyrate dehydrogenase, Class: EC1.1.1.30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bdh-2
Sequence:
1 MHLNGKHALV TGGGTGIGLA IAQALAAEGA QVTITGRRAE VLEQVATEGL HPMAMDVRHE
61 EEVVTGVARA VEARGPIQIC VANAGIAVGK TLQKTDMAFW RDIMATNLDG AFLTIRESLR
121 SMLETDWGRV ITVASIAGLR GAPGAGAYAA SKHGMIGLTR TYSEEFMGTP YTFNALCPGY
181 VDTPIVERNT ASISQRTGMA ADDALQLMVN QNRHKRLIAP EEVAAAALWL VRPGSQSING
241 QCIEIAGGQT
SEQDB ID: 3101377EQJ
Reference:
3101377
Name: kynureninase, Class: EC3.7.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kynU
Sequence:
1 MRGLMTDFAA TKAMFDLPQG VLYLDGNSLG PLPRAAAARV QQAVTDEWGQ LLITGWNKAG
61 WMAQPSELGD RIGRLIGAEP GHVVTGDTLS IKVYQAVASA LELTPGRKVV LSDNGNFPTD
121 LYMVEGLLRS MGPDYELRVV APEAVEAAIT DEIAVLMLTE VDYRTGRKHD MAALTARAHA
181 AGALTVWDLA HSAGALPVDL AGCDADFAVG CTYKYLNGGP GAPAFIYVAP RHADQVRPAL
241 SGWLGHQAPF AFDLDYRPGA GIERMRVGTP PVIQMAALSA ALDVWDMADM ADVRAKSIEL
301 TELFIAGVEA ACPDLELASP RDPAQRGSQV SFRFAEGYAA MQALIARGVI GDFRAPDIMR
361 FGFTPLFIDA GDVKAAVAII ADVMQNRLWD NPEYKTRARV T
SEQDB ID: 3101377EQK
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDADFDPRQ KAILDSAWQA FAAYGFRKTS MDDIARGARM SRPAVYLCYK NKEAIFRAVV
61 QYCYDLTAEA VQGALGAGGS VPEVLERAFI AHGQTVVALL DSPHGVELLD AGSSTAPDIV
121 DAGEAGLRAL YAAWLTREAA ARRVALHGDV EEVAATIAAA LKGVKMTAPD FETYKARTAQ
181 LAQILGAGLM RG
SEQDB ID: 3101377EQL
Reference:
3101377
Name: isoquinoline 1-oxidoreductase, Subunit: alpha, Class: EC1.3.99.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: iorA
Sequence:
1 MATSLTVNGE THRVDLPDDV PLLWVLRDEI GLTGTKFGCG VAACGACTVH IDGEAVRSCQ
61 VALGDVWGQV TTIEGTGTPE ALSVLQQAWV DHQVAQCGYC QSGQIMQAAA LLAENPAPSD
121 TEIDEAMQGN LCRCGTYPRI RAAIHGAAAK LKEV
SEQDB ID: 3101377EQM
Reference:
3101377
Name: isoquinoline 1-oxidoreductase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLGKIVRR TFLIGSAAIV GGVAFGAYYV SRPAPNPLKP GPGEAALNPF VLIDQQGVTL
61 FAPRAEMGQG VMTTWAALIA EELDVIPEQV RVLHGPAAAA YYNSALLGDA LPGKGYDTSN
121 FQHSLGEALG VIGRTLSLQV TGGSTSMKDG FVRMREAGAS ARETLKQAAA NRLGVARDTL
181 RTEAGAVIAA DGSRIPYPDL AEDAAKLDPV EAPLRDPSEW RYLGRTLPRL DMVAKSTGTA
241 EFGVDVRLPG MKFASVRMNP NLGGGMKGFD DSAARAMPGV EKVVDLGGGV AVIASNTWLA
301 MQAVEAIAVE WETAPYPPET DAIFAQIARA FDDSPNSTMR DDGDVTTLPE GATVIEAEYS
361 APYLAHATME PMNGTALYTG DRLEFWGGNQ APTFMQMKIA EAAGLDTEAV EVHTTYLGGG
421 YGRRAEFDFG VIATRVAMAL PGVPVQTTWS REEDMRHDFY RPGALARMRG AVKDGKAVMI
481 DGRLATQSPS RQAMTRVTGM PGAGPDKVLV EGFFNQPYAV PNYRISGHIA DLAIPVGFWR
541 SVGNSHNGFF HETFVDEMAH AAGRDPLEFR LELMRAEHAP SAGCLEAVRE MSGWTGKTPE
601 GVGRGVAFTY SFGTSVAQVI EVVDEGGTIR IARAWIACDI GLVLDPETVK AQMFGGMVYG
661 LSAAAHGRIT FAGGAVEQGN FPDYDALRMH SAPQVEVRVL ETNRHMGGAG EPGTPPAMPA
721 LGNALFDLTG KRVRSMPFAE HFNLLV
SEQDB ID: 3101377EQN
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSGYLVTLG ADQDLSLAAS IGGSLVSFTT AQSLGAGQWS WTGDYAGTPY YNELEPGQYY
61 LATNGNVYFV PDLGPVTNLT EGSATAAPFY SPENKVQGTN GADNMDSGFV DRNGNSIDSG
121 DGSDPDGNND EVYGLGGNDT IQSGLGADTV YGGSGGDLID GGDGDDVLFG DGPTPTTEAL
181 NWFAEGADGT NLSAGFTQTT GQMDVSVSFT NTGNNNPLFQ VETTDQIYVN GGEDFNNHSS
241 LYLFGNGDGA TSTTTIDFAA NANYDVQNEV EDVVFRINDV DWASGNHRDI ITVNAFDADG
301 NPVAVTLTPT PTGTGVDTVS GNTITAGSLS DSPDSATGSV LVEVAGPVQS IEIIYSNALS
361 GTQAIWVSDI YFTPIAAPGG NDTIDGGQGN DTLAGQAGDD LLDGGQGADQ VLGGAGNDTV
421 AAAQGDTIDG GDGDDLFVLS DLGEIGSGTI SIVGGEGDET DGDTLDLNGI ADRNTLNLTS
481 NVPGELAGTV ELTDGTLVSF SNIENIICFT PGTLIATAHG PRAIETLRPG DLIVTRDHGL
541 QPLRWVGSRT VAATGNHAPI RLDPTLLQGA SAPLLVSPQH RMLWSGSRAQ MYFGESEVLV
601 AATHLLGSPA ARRVEGGLVT YMHLMLDRHE VIYANDAATE SFFPGDEGLG ALSDRARQEV
661 FDLFPELRSH AGAFGDTARL CLKAHEARIL AA
SEQDB ID: 3101377EQP
Reference:
3101377
Name: dipeptidase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYAIYVGKN HSRTGHAWLA GYGDEPSSHW LEIVPAADHG DGARIEVGVG PEADMPGRRI
61 TVPQARHTLR HMRVSYSYYL GVPAPITNGG VNEAGVAVRD VWSTSRAELR EMTPRDQTGF
121 NYSDLARAVL ERATSARGAV DLCAALIAEY GEATYGGNSH LFADEDEAWV MIQFAGGQGL
181 WVAERLGPDS IRASRPGYVL EVPVDDRDHP DFMWSPNFVS FARDRGWYDG GPFDANAIYG
241 DGKGRWDGIR WIEAEMTKRA ARPEKIGLDD MIWAVRTERL TGDTAGYGQV VPLARAADPA
301 LAMMWHAACG ALAAPFSPVF LGQDRIPPEY GLHRYLTSGE SHRFQDTRKA VSGGHDTISV
361 VPQANEISVG AFQQSKQLMY LMQLLGEETL NPVHAAFARR EDRLSALVLS HIRVAETAIS
421 AGCRADALAV LSAFSNTELT AALSLVRDLC RGLSVHATHL PEGPVSFPQT W
SEQDB ID: 3101377EQQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGLIFTGGP ILSMDAGDTR PEAVGVFGDR IVAVGTLAQV RQALPDATLQ ELGGRTLIPA
61 FIDPHGHFPD SAIVALLRAD LSPRTGCRSL ADLFARLAAK AAQTAPGEWV MGAGLDDSQL
121 AERRMPTRDE LDAVSPDHPI WVIHSSGHCG VANSMALARQ GITQDSPDPE GGRYLRDASG
181 RLTGGIEGLS AMGEMGDTHF LLDEASFACC FAAARAEYLA QGVTLAQNSW TAQPLLDLFH
241 KVAVQVDPGI DLILLPVAEI EPEFSQTGIG RDWPEGAITL GPRKLLTDGS FLMRTAFLTA
301 PYLGTEETGL AYMSRDLLFS EVRKLHRLGF QVHCHCNGDA ASDMFLDAVA AAQADHPRDD
361 HRHTIIHGQV MRRDQIVRCR ALGVSVSFFP AHVWFWGDQH HEEILGPRRA QDISPTGWAE
421 AEGVRFTIHN DASVTPTRPL ELIETTVTRR TQGGRVLGPD QRQSPLSALR AHTIDAAWQV
481 FREKERGSLE VGKLAELAIL DDNPLTTSGA IGAIRVSETW RRGIRVYRDT TMKVGEPA
SEQDB ID: 3101377EQR
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALLELNDV VVRFGVRGGL FRDAGSIDAV SGVSLTIDEG KTYGIVGESG SGKTTLARAV
61 AGLHHASAGS IRYRGQELRD LPEAQFRKLR REIVMMFQDP IGSLSPRLSI KSLITEPFRI
121 QGMKDRDLDA EARRLLAMVG LPPEFAARYP YQISGGQARR VGVARALALD PKLLIADEPT
181 AGLDVSIQGE MLNLLGRLQD ELGLAIMIIT HNLNVVRHIT DRVGIMYLGK LVEEGDTDTV
241 FATPQHPYTL ALLAANPEPD PDAQLMRIEL QGEPPSILRR PKGCEFHTRC PFAQASCSSQ
301 MPDWQVGDAG AHRCHFPAVW TNHKAVPA
SEQDB ID: 3101377EQT
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMAVLDIQGL SVSYATPRGE LKALRDVSMI VPERKIVGIV GESGCGKSTL ISAIIRLMAP
61 NARVAAGDVM FRGEDLLGRS AAQMRGLRGT EISMVFQDPM QTHNPVLTVG RQMMDIQYRD
121 RLTKAEKRKR ATEMLALVGI PDPEARLNQY PFEFSGGMRQ RIAIAMALMA KPSLLIADEP
181 TTALDATLEV QIIKRLRELQ DDIGCSILFI SHHLGVIAEL CDEVVVMYAG EVIEAGSVRD
241 VFHTPAHPYT RALLECDPGH IREKTRNLPT IPGSIPDLVN LPGGCVFAAR CPQRHAACAV
301 RPEPQFASPG HRAACHLIKA EVRA
SEQDB ID: 3101377EQU
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDTTMPKPR SELGEILYHL VRDPLGLTGL VIVVLILASA LFAPWIAPYD PIALNVPDRL
61 QGPSGAHLMG TDQLGRDTFS RVIWGGRVAL QVALPTIGGA IFFGLLLGMI AGYGPKWLDN
121 LIVLLFDTIR SFPTVMFALA VVALVGPSLN TVIVVIMVTS IPTYGRVVRT LTQSLKEAEF
181 ITAEKSLGAS TPRIMAVHIL PNVLGPLAVL AAMDIPTVVG LEAGLSFLGM GVKPPTPSWG
241 SLLNDGYNLI RNTPWLIIAG GIPLILTTIG FTFLGEALRD VVDPKLRGKG GK
SEQDB ID: 3101377EQV
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSFIFKRIG LAAVITVLAV SSLFLIVHMI PGDPVSTMLG PRATPEMRAA LETRMGLDKP
61 LIVQIGLFFA NMLRGDLGMD VFSNRPVTEI VLNQVPFTLT LILFSITWSA VLGIALGCYS
121 AVNRNSLGDR LTGILSVSVI AVPAFVVALY SLLIFAVKLQ WFPAIGAGDA GDWGDQLHHL
181 VLPSLAIGLS WVGYIARLVR ASMLEVMGEG HIRTARAFGL PERRIVFGYA LRLAILPTVT
241 VIGVGMGFLL SAAVFTEIVF SRPGLGKLVI DSITTRNYPV VMGSVLFSTL IFVASTTLAD
301 IVNAILDPRI RAGK
SEQDB ID: 3101377EQW
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: periplasmic dipeptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNKPNISWTK VGLPRRSFLK GATALGGLAA TGMMMPRMAH AAGGTLKTRT YADIRSMDPA
61 FSQGVVDEEI HAAIYNKLIQ YKPGREWGWQ LDAAAMIEQV DDTHINFALK DNIGFTGGFG
121 AMTAEDVKFS FERIIDDTLE STNKPDWGPL DHVEVTGERT GTIVLKNAFQ PLWSITLPYI
181 AGNIVSKAAF DSVGGKIDTQ PVATSGPYLH AGWEPKQKTT LRRNPDWKGE AAAFDEIQIY
241 HIDDEKAAEI AFEAGEIDFT RVSLDSVERL KSNPIAGATL EEFPSLYYVW VGMNLDNPKL
301 GNLKLRQAIQ HAIDVPTIMA AAYFGAAEPS TGIIAPGLSG HRDAPLTGMS ADLEKAQALM
361 AESGEAGVSL AIDVLNKSAN VTAAQIIQAN LAAIGVTLEI RLHEGATFWE LGSNEELELV
421 LNRYSMTPDP YYATSWFITE QAGVWNWERF RSEEFDKLHL AAQSEGDPAA RAAMYARAQD
481 LMEESGAYKF LTHEATPVIY RDSVTPALRP DGLPLYRYFG TA
SEQDB ID: 3101377EQX
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQIDDFASNL RLLCSTESSV SAVCRQIGVN RQQFSKYLSG AARPSPSNMR KIAVHFGVRP
61 AEFMLPADEF ESHPSVAGKL VGPSVTHSDR DGFESAFRGQ TIPLRRYLGY YLSYFLTQSW
121 ENSIICAIVR LDEVNGLIRC RSLERSIDPD DGSLYLSKYD GRVAMLGNRI FVMEYQTLAR
181 DALVETVLYP VGRGQLQYLR GTTFGITSRQ RTPFTSPVVW RYLDDFPTLR DVMRKVGRYD
241 INSAKLDPTA RSILLGGHNK GTD
SEQDB ID: 3101377EQY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARPVVGIIG NSYLLNDQYP THAGGTMNSD AVANVSGCLP LLIPADPRYV SVAELLEVCD
61 GFLLTGGRPN VHPEEYGECE TAAHGDFDRA RDAITLPLVR ACVERGQPFL GICRGFQEVN
121 VAMGGTLYPE IRDLPGRMNH RMPPDGTLEE KFALRHIVSV TEGGVFHRVF GAREVMTNTL
181 HGQGIKTAGA RIEIDGLAPD GTPEAIYVRD APGFTLSVQW HPEWDAASDP VSRPLFAAFG
241 DAVRDWAARG TGPVLQKTG
SEQDB ID: 3101377ER
Reference:
3101377
Name: peptidyl-tRNA hydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLYVTDDIAI QDWELSESFM RASGPGGQNV NKVSSAVELR FEAARSPSLP APVKARLKRL
61 AGRRWTGEGA IVLQCDETRS QARNREIVRA RLVELIARAL VAPKRRIATK PTRGSVRRRL
121 DSKKARGEVK ALRGKIGDE
SEQDB ID: 3101377ERA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAISLRRARM IIRKALEKGR EMQLKPLSVV VLDAGGHVIA FEREDGAAPG RFGIAQGKAY
61 GSVMLGMAGT AQMARAEAQA YFMAAVNGVY GGKVIPVPGG VLVRDKKGAV IGAVGVTGDT
121 SDNDAIAAMS GIDAAGLAGE I
SEQDB ID: 3101377ERB
Reference:
3101377
Name: malate synthase, Isotype: G, Class: EC2.3.3.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glcB
Sequence:
1 MSGRVERNGL EIAGELAAFV ETRALPGTGV EPDAFWAGMA RMVAELGPKN RALLDRRAAL
61 QAQIDAWHVA HRDKPHDHEA YKTFLAEIGY LLPEGAAFEI ETANTDPEIA SVPGPQLVVP
121 ITNARYALNA ANARWGSLYD ALYGTDAMAG PVPAGGYDRG RGARVVARAR VFLDEAFPVQ
181 GVSHADARRY HIRDGALLVD GQPLIDPSKF AGYRGHPKAP DAVLLRNNGL HVELVFDRTH
241 PVGCHDQAGL ADVRLESAIS AIMDCEDSVA CVDAEDKVQA YSNWLGLMRG DLSEEVTKGG
301 ATFTRALAGD LDYLAPDGSA MSVKGRALML VRNVGHLMTN PAVLDADGAE IYEGLMDALV
361 TVAIAMHDLK RAGGNSLTGS VYVVKPKMHG PEEVAFAVET FDMVEDILGL PRNTVKIGIM
421 DEERRTSVNL KECIRAAKSR VCFINTGFLD RTGDEIHTSM EAGPFSRKDF IKRKSWITAY
481 ENLNVDIGLD CGLSGKAQIG KGMWAMPDRM AAMIETKIEH PKAGANCAWV PSPTAATLHA
541 LHYHKVDVFA VQGALKSGGR RAHVDGILEI PLASFRKWSS EQIRREVENN AQGILGYVVR
601 WVDQGVGCSK VPDINDVGLM EDRATCRISA QHIANWLHHD VVDAQEVMAA MRKMAAVVDE
661 QNAGDPAYHP MAPGFDGIAF QAACDLVFKG RVQPSGYTEP VLHARRLELK ASLGA
SEQDB ID: 3101377ERC
Reference:
3101377
Name: GGDEF domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRINTRRKKW AAVAVVTLVS VIASVIVTVI VVGTLDPQSL RPAIIVPLLV APLATHWGAE
61 RLLEIDKLNQ QLAHLNRIDQ MTQLYNRACL LEKLEQEPEE AGMILIADID HFKQINDTYG
121 HDVGDLVIIE VARVLQRSSL PEGIAARFGG EEFVIYVPRL DLEAAEFRAE AIRQAVEAQS
181 VMIDGRKLSC TISIGIEIRQ MQENVGDVLK RADEALYRAK AQGRNQVVAA RRLARAGKSR
241 ETAQARRAP
SEQDB ID: 3101377ERD
Reference:
3101377
Name: aminopeptidase, Isotype: N, Class: EC3.4.11.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pepN
Sequence:
1 MRDAAPTTIH LKDYTPFGYL VDEVHLTFDL APDATRVTSR IAFRPNPEAP GHRFFLHGEE
61 LRLIRAAIDG AEVTPEITDA GLTCAAPDTP FVWEAEVEIA PAANTALEGL YLSNGMYCTQ
121 CEAEGFRKIT YYPDRPDVMS TFTVRINGTH PVLLSNGNPV DSGEGFAEWH DPWPKPAYLF
181 ALVAGDLVAH SDRFTTVSGR EVDLNLWVRP GDEDKCAFGM EALKKSMRWD EEVYGREYDL
241 DVFNIVAVDD FNMGAMENKG LNIFNSAAVL ASPETSTDDN FERIEAIIAH EYFHNWTGNR
301 ITCRDWFQLC LKEGLTVFRD AQFTSDLRSA PVKRIRDVID LRGRQFPEDQ GPLSHPVRPE
361 SFQEINNFYT ATVYEKGAEV IGMLKRLVGD AAYAEALDLY FARHDGQACT IEDWLKVFED
421 VTGRDLAQFK HWYSQAGTPR LTVEEAWQDG TFTLTLSQDT PATPGQPDKL PQVIPVAVGL
481 LNPNGDEVHA TEVLELTQAR QSFSFEGLAA RPVASVLRDF SAPVVLDHDL SPEQRAFLLA
541 HDTDPFNRWE AGRSLAGQCL LDMIIEGTAP DTAYLDGLVA VLRDDGLDPA YRALMLGLPS
601 QSELAASLQQ RGLTPDPQAI WDATETLRQA TAQHMQDLLP RLRAEAQVDA PFRPDADQAG
661 RRALGSATLA LLSRLDGGAQ AAADFTRADN MSLQLSSLSC LLKAGKGEVE LAAFYDQWRG
721 DRLVIDKWFG LQVAMAAPGQ TAETARRLSA HAEFNWRNPN RFRAVFGALA MHHAGFHHAS
781 GAAYQLLADW LIRLDPVNPQ TTARMCAAFQ TWRRYDEGRQ ALIGAQLDRI LAQPNLSRDT
841 TEMLTRIRGS
SEQDB ID: 3101377ERE
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPTLLITGA SAGIGAATAR LAATRGYDLA LNYRQDRAGA EAVAEAARDA GAQVILCPGD
61 VADPEDIRRI YARVDEGFGR LDGLVNNAGI VDHAARVTDL THARLRRMFD VNVIGAILVA
121 KEAVLRMQAH GQGGAIVNLS SAAARLGSAN QYVDYAASKA AIDIFTKGLA DEVAAEGIRV
181 NALRPGLIET AIHAKGGEPD RAQRLAPGVP MRRTGTATEA AEAVLFLLSD AASYVTGTTL
241 DVSGGR
SEQDB ID: 3101377ERF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLAPRWMSA AEGDPAMTEP LRYVRHARSP RNLALLAAIW AGLVAAVVLF DAAWWLIALF
61 ALPTLPLLFE ILSDRRAGLD LDATRLSWFS GRLDGAVALD EIAQVRLDTR WDFTVRATLY
121 LHSGKQVRLP QECLPPHRRF EEILTARGLV VVRHHFAGR
SEQDB ID: 3101377ERG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSISGAWSV RWLSCRASST ASTTSERAPK ASRSATGVPP SVVSRVASAA RIASERSCQR
61 SWRARNWPCA RSRAQSASSR PCSATGMERK SSSRTGLRGC FCADKSTARP KSRAVRSGKE
121 LSKVRECFSI LVNAWPVWCR IGLKLTLICG TKKAAAGCFG TGFAASLGDW ACTGINPLTT
181 GEMMPNNDQS ARGQDFLEPA MRRQAFLGQA HLFARMQVQC GADGEIPAGV EPDLGDLVQR
241 DGAVEPAGKP AEPGGVQIEP RAAVAQDLEQ ERQCRQGEKR DQPPGGIKQH HRRNQPRPDR
301 RQQGQIARAA GVADITERFG HRWVTFRR
SEQDB ID: 3101377ERH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFGIISPVVS GLMPVQAQSP RLAAKPVPKH PAAAFFVPQI SVSLRPIRHQ TGQALTSMLK
61 HSRTLLSSLP DLTARLFGRA VDLSAQKQPR SPVRLEDFLS IPVAEHGRDE ADCARLRAHG
121 QFLARQERWQ DLSDAIRAAD ATRETTEGGT PVADLLAFGA RSDVVLAVEE ALQDSHRTDQ
181 APLIDGIRAL EFVRQDHPDD PYIALIVALT HIDLAWAWRG TGWDTIVPRL NREKCAAHFD
241 RAIEILSPWC GVKMDSPILQ AACCALLAGR RTSQRRVADC YEALIDLDRH NSRHMRALGN
301 HLLPRWFGSY AELELEARRT AARTQDIWGA GGYTWVYLDA IAQDEEACAR VDVDFFIDGL
361 RDIARARPEQ ETINLLAAYC TVTLRGNIGL HEEADLNRMQ ICDAADWLIR DHLTEVHPMI
421 WAHASEGFDN NMRVSSPSRF AARGRADALQ IIASLFRDEI RNGNRVVFTP EGPQLHGA
SEQDB ID: 3101377ERJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLFVTGASG LVGGAVLRAG VAAGHQVAGL ARSDRAAEQV SGDGGQVCRG DLRLPGGWVA
61 EAVAADAVIH AAATFGPDMG DVDRAAMEAL VRAARRAGRR PRLIYTGGIW LYGDTCGQIR
121 DESAPFDPAT PWAWMLGTVA MLEASDATDL AVLHPGAVYD SDGGGMLERF RVPEVEILGD
181 PAIRWPLVHA DDLAQAYLLL AGMQGQGGHF LATAEPGRPV GEIARSVAGP DVPIRVLDRA
241 EALARYGDSA VGPMLDQRLA APRLRALGWC PRFDDVTHSL
SEQDB ID: 3101377ERK
Reference:
3101377
Name: Glu-tRNA(Gln) amidotransferase, Subunit: B, Class: EC6.3.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gatB
Sequence:
1 MLDLTFETPK PKTIAGAKHD WELVIGMEVH AQVASQAKLF SGASTAFGAE PNSNVSFVDA
61 AMPGMLPVIN EFCVEQAVRT GLGLKAEINL KSAFDRKNYF YPDLPQGYQI SQLYHPIVGE
121 GEVLVEMGDG TARRVRIERI HMEQDAGKSI HDMDPNMSFV DLNRTGVCLM EIVSRPDIRG
181 PEEAAAYIAK LRQILRYLGT CDGNMQNGNL RADVNVSICR PGAYEKYQET QDFSHLGTRC
241 EIKNMNSMRF IQAAIEYEAR RQIAIVEAGG EVDQETRLYD PDKNETRSMR SKEEAHDYRY
301 FPDPDLLPLE IEQAWVDDIA ASLPELPDDK KARFIKEFGL TDYDASVLTA EVESARYFEE
361 VAQGRNGKLA ANWVINELFG RLKKEDHDIT DSPVSPSQLG GIIDLIASDA ISGKIAKDLF
421 EIVYTEGGDP AEIVEARGMK QVTDTGAIEA ALDEIIAANP AQVEKAKVNP KLAGWFVGQV
481 MKATGGKANP GVVNQMVSKK LNG
SEQDB ID: 3101377ERL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPPGVVCAR SKEALSMIRY EYKVVPAPEK GIKAKGVKTA PARFALSVEQ ALNQLAAEGW
61 EYQRAELLPS EERSGLTGST TNWRNLLVFR RPLPAGPEVL PETEAKAEVE APAPASDSAD
121 TPPLARPVPG PAEADRRAPA PIAAPVNDPP MHGAKPADTP SAEPEPDREA KLDRD
SEQDB ID: 3101377ERM
Reference:
3101377
Name: BolA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIAEEMRAR LQAAFAPTEL EVVDDSESHR GHAGFREGGQ SHFNIRIRAA AFAGQSRVAR
61 HRAVHAALGD IVPRIHALAL DIGT
SEQDB ID: 3101377ERN
Reference:
3101377
Name: DnaJ domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKSDPFGFD MSVSSAKKKN PRGRRGMSGA SETSVRVCEH EGCTEAGKFR APKAPDVLDD
61 YFWFCQQHVR EYNQKWNFFD GTTEAEMNAQ MSKDKVWERK TRPMTDPEAR AWARLGIEDP
121 HQVLGANATQ NPGRANTGRR LPPTERRAIE ILEAKDSWTK AEVRAAYKKL IKVLHPDMNG
181 GDRSQEEQLQ EVVWAWDQIK DSRNFK
SEQDB ID: 3101377ERP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVVCLRAGR PRIISARISR DCNSLSGAPE RPGTAVFRRN RMAGRCLFII SFCLTRIGVK
61 VWVTFVPREE GQMALNIFGP PVINVPPATE TITQLYTASK PAAWSVVVTG DGALTPADYS
121 VTISGSGLLT VTLMPGVIVP PGTALSLTIS ASSGPGAGNN GSLNVTVNLP AGVVPCFVAG
181 SLIDTVEGPR PVETLAVGDL VPVEDGPPQP ILWIGKRTLS IADLGANPHL RPVRIRRDAL
241 GPSCPHRTLW VSPQHRIVLQ GWRAELFFGE AQVFAAAIHL TNDDTIRQCR PNRAVTYYHL
301 AFERHLLLRA HGLLSESIFL GDIAFLALRR SDVEELLVLF PELRSRTGRD ASRTRLRCLT
361 GSEARLAGAR SGPGRRGQPR APQSAIT
SEQDB ID: 3101377ERQ
Reference:
3101377
Name: czcN domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDILPLLAPF ALALSLFSAL LLGGYLALNL WRPALALWPS ASGWRHHLAF GLFRLFCGAT
61 IVFALSEAAV NGWGHWLRFA LGVPVMLAAF AITLWGYRFL GLDNTYCNSG GLVTGGIYAW
121 SRNPQYVTSV MATLGLAIAA GSVLTALLAG LLFLLYFLFI LNEERWLLAG YGAAFRDYMR
181 ATPRFVDTRS LMRMRAALLG
SEQDB ID: 3101377ERR
Reference:
3101377
Name: Co chelatase, Subunit: CobS, Class: EC6.6.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAKSAHAAL FAFSLRLGAI WCTPTRLARP DRRGKAIRTI GMADGTIPMN AKPTEEISVR
61 EVFGIDTPML VKGFAERSDR VPEIDQTYKF DPDTTLAILA GFSHNRRVMV QGYHGTGKST
121 HIEQVAARLN WPCVRVNLDS HISRIDLIGK DAIKLRDGKQ VTEFHEGILP WALRNPVAIV
181 FDEYDAGRAD VMFVIQRVLE HDGKLTLLDQ NEIITPNPCF RLFATANTVG LGDTTGLYHG
241 TQQINQAQMD RWSLVATLNY LSHDAETMIV LSKAPHYNTE KGRKQVSQMV TVADLTRTAF
301 MNGDLSTVMS PRTVINWAQN AEIFRDVGYA FRLTFLNKCD ELERQTVAEF YQRCFDEELP
361 ESAASTSLG
SEQDB ID: 3101377ERT
Reference:
3101377
Name: thermonuclease, Class: EC3.1.31.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nucH
Sequence:
1 MIRAALVAAV VLGGCTPLPP TAVAYVPTRA NAVCAITEVV DGDTLRLSCT EGRGGTVRLV
61 GFDTPETYRP GCAAEKARGE MAKRFLEAHL RQARVIRPDY QGKDKYKRLL VRFEVDGTNL
121 AKTMVDARLA VPYAGGKRID WCRKLAA
SEQDB ID: 3101377ERU
Reference:
3101377
Name: Co chelatase, Subunit: pCobT
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKPTDNPAD PFKKALAEAT KVMADDPDLS VSYTVDPSGV SGDAMRLPQV SRRMTRDEVL
61 LARGTADALA LYRRYHDDAT HSRYAPPGDM ARDLYEAMET ARCEAMGARD MPGTASNIDV
121 KITHEALRRG YDQCKQPSEA PLPVAAGYLV RHLATGRDLP AAAANVMNLW RGFIEEQAGG
181 TLENLSDILS NQAEFAKFAR QVIKDLGYGD QLGDDPDEMD EDQEDQAEDD ADEQPDPDST
241 GQDDQDDQDA DADPEQSQEQ QQDESQAQVS MDELADEELA EETEMPDGEA PLEPPPPPPA
301 SEADPNYKVY LDTHDEEIAA EELAEPAELE RLRAYLDQQL EPLKGAVSRL ANKLQRRLQA
361 QQNRSWEFDR EEGILDAGRL ARVVANPTTP LSFKVEKDTE FRDTVVTLLL DNSGSMRGRP
421 ISIAAICADV LARTLERCNV KVEILGFTTR AWKGGLAREA WLNEGRPQQP GRLNDLRHII
481 YKAADAPMRR TRQNLGLMMK EGLLKENIDG EALEWAHRRM LGRREQRKIL MVISDGAPVD
541 DSTLSVNPAN YLEKHLRDVI AMVERRKQVE LLAIGIGHDV TRYYQRAVTI TDVEQLAGAM
601 TEQLAALFDS DPRARARVMG MKRAS
SEQDB ID: 3101377ERV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYHAAMIRL AALFVSMCLA LPLAAQEEEP PTPETARRNA ADAISEKLAN PANPGQARVS
61 RLIKDGETIR LCATSDARNA RGTYIGRDYW EVTLSSDGKT VLRTRNVTGL LSHCYGAEYK
121 PFKEMLEE
SEQDB ID: 3101377ERW
Reference:
3101377
Name: metallopeptidase, Isotype: family M24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYQSFEVTAR PEQGPPRLEQ LRAQMRAEGL SGFLVPRADA HQGEYVAAHD ERLAWLTGFT
61 GSAGFCAVLM DVAGVFIDGR YRTQVKAQVA DVYTPVPWPD VTLTAWLKEQ LPQGGRVGFD
121 PWLHAAGQIR TATGELKGSG IELVPCDNLV DRIWQDQPPP PMEAVKAHPM EFAGESAPDK
181 AARLAEDLRK AGQQAAVITL PDSIMWLLNI RGADIPRNPV AHGFAILHAD GRVDLFMAAQ
241 KLTGLGDHLD ASVTQHEPDG FLDAVAALTG PVRVDLNTLP QIVADRLGDR MSDGGDPCAL
301 PKARKNAAEI AGAAEAHLRD GAAMVELLAW LDAQAPGSLT ETQVVTRLEQ CRRRDNGLQE
361 ISFETISGTG PNGAIMHYRV TEETDSRLEN GHLLVLDSGG QYLDGTTDVT RTIAIGAVGD
421 EEKACFTRVL KGMIAMSMLR WPVGLAGRDI ECVARLPLWL AGQDFNHGVG HGVGAYLSVH
481 EGPQRLARTS HVPLEPGMIL SNEPGYYREG AFGIRIENLV VVQEAAPLPG GDGERAMLDW
541 RTLTYVPIDR RLIVADMLTA EERRWLNAYH ADVAAKIGPR LGAETRMWLD AATAPL
SEQDB ID: 3101377ERX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDHITIRKA PGKWSVRSGG AILGESSDAL ELSEGDLPPV IYFPRADIAM AFLDRSDKTT
61 HCPHKGDASY YSIVNRSSVT KDAVWSYEDP LPAMERIKGY LAFVLSDSVK VEQI
SEQDB ID: 3101377ERY
Reference:
3101377
Name: 3-hydroxyisobutyrate dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKVGFIGLGN VGGKLSGSLL RNGIDLTVHD LNPDLVAGFV SRGAKAAEGP AQMMRDCDAV
61 ITCLPSPAAS AAVMAEMLPE VGPGKIWMEM STTDEAEVKR LGEQVIARGG AAVDCPVSGG
121 CHRADTGNIS IFAGCDRATF ERILPFLTVM GRRILHTGPL GSASVLKVMT NYLATANLLT
181 CCEALVTMKA AGMDLNTTYE AIKISSGTSF VHETESQVIL NGSRDINFTM DLVKKDIGLF
241 QSIAERTGVP LEISPLMISI FEDGIARYGM RAQSDDIIRR LEEATGLDIT APGFPPEMVD
301 DEPEEPGYEV VPQGLERQAG
SEQDB ID: 3101377ET
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNHMRLDGKT AIVTGGAQGF GAGIVAKFVS EGARVMVADI NLDTARETAA QMDGDAFAHQ
61 VDVSDGNSVD AMAAAALRRF GHVDILVNNA GVTHLPTAME DVSEADFDRV YRVNMKSVYL
121 TARALVPHMK DRGKGAILNV ASTAGVSPRP RLNWYNASKG WMITATRTMA VELAPNGIRV
181 NALNPVAGET PLLKSFMGED TPEMRAKFLS TIPLGRFSTP QDMGNAACFL CSDEASMITG
241 VAMEVDGGRC I
SEQDB ID: 3101377ETA
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLPNPVWL RTFEAAARHL NFTEAARELG LTQTAVSLHI RSLEAELGEP LFTRAARRLG
61 LTELGRSYAL SVRQALADVA LSTSSLFGPA RRGILRLRAP ISSAAYWLAA TLPDFAADHP
121 GIPVRLVSNI WDDGPAAGGV DVDIRLGRGD WAGLVTEKLC DETIVPVIRA GAPEQPLPAL
181 QAHQLIHILG YEDNWPRWFA AQGLPAPTGG SLYSVDTTVA ALQLVMAGAG LAIVLTRFAQ
241 GAIAQGAPLR LAGPPIPFSQ AHYLVRPERA APPGAPAQLY LDWLRARLAA DAAG
SEQDB ID: 3101377ETB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDPGGMREMS EHAPVELLVC TTCRRGLPVE DDAQRPGALL HRALSAAELP EGVILKPVEC
61 LSNCDQGCSI VLRGGPARWT FVYENLNEAD DVATIVEGVT KYHATADGLV PWRERPVHFR
121 KNCAARIPPI GA
SEQDB ID: 3101377ETC
Reference:
3101377
Name: CobW protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTLEKLPVT VITGFLGAGK TTLIRHLMQN PQGKRLAVVV NEFGDVGVDG EILKSCAIPE
61 CPAENIMELA NGCICCTVAD DFIPTIEALM ALEPRPDHIL IETSGLALPK PLLKAFDWPD
121 IRSKITVDGV IALADAEAVA AGRFAPNVAA VDAQRLADDS IDHETPLSEV FEDQISCADI
181 ILLTKPDLAG PEGVARAREV IAAEAPRPLP VVEVAEGAVD VRVILGLGAA AEDDMDARPS
241 HHDGHDDHEH DDFESIVVEL PEQSDPAELV ARIERLANEL NILRVKGYAA VAGKPMRLLV
301 QAVGARVRHQ YDRPWQPGEE RRSRMVVIAE HHDIDPAAIN AILTGVSEPA E
SEQDB ID: 3101377ETD
Reference:
3101377
Name: CobN protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVVFRESHG LEETETPTDL GQSPADLVVL SFSDSDLGAF AAGWHRGGGA VGKLPTLRLA
61 NLTALKHPLS VDTYVDNTLS GAKGILIRLI GGVPYWAYGL QQVLALAQQK GLALAVLPAD
121 GREDTRLDAY STLPVSTLRR LQHLCDTGGE VAAQAALAQM ALATGLYAGP VIGSKILPEC
181 GFWCPERGVI APETVFEGNA PRILVTFYRA YLTSADTASV AALIRAFRAR GFQAMGMFAP
241 SLKAPAAADW IAGQMPGLAP AAIVNATSFS GKGANGASPL DAAGVPVFQV ALATSRRKAW
301 AEAERGLSPA DLAMHVVLPE VDGRIDAGLI SFKEPGKRDP ALEYSRFAHR PEPDRIEAVV
361 NRVSGWLRLA AKPVAERVLA LVLSTYPGKD WQMAHAVGLD ALASAEAILC DLQDEGYDIA
421 SGQPITEELQ TVSISWPITE YRKALASISP QLHQDLQSAW GDPESDPAFS QGNLQFRAIR
481 RGKALVALQP ERGTPEARDD DYHDLSRTPR HGYVAFYLWL RQALGADALI HIGAHGTLEW
541 LPGKAVALSG QCWPEVLIGD LPVIYPFIVN DPGEAAQAKR RIGAVTLGHI PPALRVSGTP
601 DRMVQLEALL DEFSNADGLD PKRRDRLQGD IRAEAQALGL EDDLGLDRAT STAEAITRID
661 RFVCDVKESQ YGDGLHVYGR VPEVTGPFDP TPSAQGEARA LLDALAGKRI AAGPSGSPYR
721 GRSDVLPTGR NLYTTDPRSV PTRAAYAQGV KLAEELVRRH LQEEGDYPKG LIVDLWGSAT
781 MRTAGEEFAM ALHLLGVKPV WDQGSERVSG IEVLPITDLD RPRLDVTLRV SGLFRDVFPT
841 LSALFGQAVR ALSARDEAPD WNPYAGHAPA ARVYGPAPGS YGLGMGHLPE TYTDEARQQA
901 GEAWLAASSF ALEGENIARD AEGIRARVAN ADGFVHLQDL AETDLLLAAD YATHEAGFAA
961 AKRVTGGEAQ LYHLDNTNPD TPRARTLPEE IARVVRARAA HPGWIAGMMR HGFRGAAEIA
1021 ATLDHMASFA HLADSVAPHL FDLYHDATLG DAKVAAFLQE ANPQAYQAML DRFRALYEAG
1081 LWQTRRNSIR ADLEGLS
SEQDB ID: 3101377ETE
Reference:
3101377
Name: CobG protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTPIVQGWC PGAHRPMMSG DGLVVRVRPR LARLSATQAL GLCALAERFG NGTIDLTNRA
61 NLQLRGVAEA DHQPLLAELA ALDLLDGEPG IEVRRNILFS PLYRDGDMAD RLGCELTARL
121 GELPALPAKF GFAIDTGAGR LLNADSADIR LERSPDGLIL RADGMATGRE VTEGEAIDRL
181 IELARWFADR FDPDTRRMAR LVQAVPLPAI WQGAEPVPVG EPLTPGETAL GPLYGAAFGQ
241 LPEPALAALL RDSGAVALRV TPWRLILLEG AQAIPAPDFV TRAGDPLLTT DACPGAPFCP
301 QAQAETRDLA RTLAGRVSGS LHVSGCAKGC ARMRPADITL VGNGGRFDLV KQGRAGDEPC
361 QRGLTPETLK TMDLT
SEQDB ID: 3101377ETF
Reference:
3101377
Name: precorrin 8X methylmutase, Class: EC5.4.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobH
Sequence:
1 MPYEYETDGA AIYKQSFATI RAEADLARFD ADEEQVAVRM IHAAGMVGLE EFVHFSPGFV
61 TAARDALEAG APILCDARMV SEGVTRFRLP ADNTVICTLH DERVRPLAAE MGNTRSAAAL
121 ELWRPHLAGA VVAIGNAPTA LFHLLNMLED PDCPRPAAII GCPVGFVGAV ESKDALWEAQ
181 PVPCCIVKGR LGGSAITVAA INAIASRAE
SEQDB ID: 3101377ETG
Reference:
3101377
Name: precorrin 2 C20-methyltransferase, Class: EC2.1.1.130
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobI
Sequence:
1 MSAGTIYGLG LGPGDPDLMS VKADRLLRGA RHVAYFRKPG RSGQARKIVN GMLSEGAVEF
61 PMEYPVTTEI PVTDPRYNQL LSEFYEAAAA HLRTLADAGE DVVVLCEGDP FFYGSFMHLY
121 TRLRDLVPVE VIPAITGMSG AWTATGTPIT WGDDVLTVLP GTLPEDVLAA RMAETDALVV
181 MKLGRNLDKV VRALKTAGLF ERAWIVEYAQ MANQQVSRLS EKCSGVTPYF SIIIVHGQGR
241 RP
SEQDB ID: 3101377ETH
Reference:
3101377
Name: precorrin 3B C17-methyltransferase, Class: EC2.1.1.131
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobJ
Sequence:
1 MSGWLRIVGL GPGSEALVTP EVTAVLEEAT DVVGYIPYVA RVAERPGLTL HASDNRVEID
61 RSRHALELAA DGHRVVVVSS GDPGVFAMAS AVFEAVEAGP RAWRDLDIQV LPGITAMLAA
121 AARAGAPLGH DFCCINLSDN LKPWPLIERR LRLAAQADFA MAFYNPRSKS RPEGFEKTLQ
181 ILREECEPER LILFARAVSR PDEALRIAQL AEATPEMADM QTVVLVGSSR TRVIERDGTP
241 IVYTPRFTPE
SEQDB ID: 3101377ETJ
Reference:
3101377
Name: precorrin 6x reductase, Class: EC1.3.1.54
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobK
Sequence:
1 MSHLLILGGT TEANALARAV AETGLRATYS YAGRVEAPRD QPIPVRVGGF GGAAGLAEFI
61 HTNNVTHLVD ATHPFAAQMS VNACAACTQT GTPLAALTRP AWQPGAGDNW RRVRDIAAAV
121 AALEGVPQRV FLAVGRMHLE AFAAQPQHDY LLRLVDAPSD PLPLPKAQVV VSRGPFTKEG
181 DKALMQKHKT QLVVSKNAGG TGARAKLDAA RDLGLPVLMI DRPVLPPRTE LATPTDVLRW
241 LRHSGVNLGV
SEQDB ID: 3101377ETK
Reference:
3101377
Name: precorrin 6Y C5,15-methyltransferase, Class: EC2.1.1.132
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobL
Sequence:
1 MSDAPWLSVI GMGEDGLDGL PPASRQALDA AEVIMAPPRH LSLLPEGPQE RIAWPVPYSD
61 GLEILSGLRG RHVAVLASGD PFWFGAGSVI ARHFDAGEWR ALPGVSTFSL AAARLGWPLE
121 KTLTLGLHAA PLTRLRPYLA SGLRALILLR DGAAVSELSR YLDQTGFAAT RLHVMEALGG
181 PRERLQTLSL AEAQAGDFAH PVCVGVEVAG EGRAIPKASG RPDAIFETDG QITKRPVRAL
241 TLSALAPQRG EHLWDIGGGT GSIGIEWLMS DSTLRATTVE PRADRAARIR ANADALGQDH
301 LRVVEGSAPE VLGSLARPDA VFIGGGLSTA LLEWLFAELP AGTRLVANAV TLESEALLAL
361 WQADKGGELL RIELAQSAPL GPRRGWKSAY PVVQWSVTL
SEQDB ID: 3101377ETL
Reference:
3101377
Name: cobalamin biosynthesis domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVAGLGFTT TAEATSLRAA YDKAAAGQAV AALATVADKA GHPALEALAA DLALPLHLIP
61 AAELAGQRTL TCSPQSRASY GTGSVAEAAA LVAAGPGARL ITPRQISDDR RATCALAIGD
121 KT
SEQDB ID: 3101377ETM
Reference:
3101377
Name: precorrin 4 C11-methyltransferase, Class: EC2.1.1.133
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobM
Sequence:
1 MTVHFIGAGP GAADLLTLRG RDIIASCPVC LYAGSLVPEE ILSHCPEGAK IVNTAPMDLD
61 QIMAEIEAAH EAGQDVARLH SGDLSVWSAM GEQIRRLKQM GIPVSVTPGV PSFAAAAAAL
121 GTELTLPGLG QSVVLTRTPG RASSMPEGES LENFARTGAT LAIHLSIGNL DKVIADLVPH
181 YGADCPVAVV YRASWPDERI IRATLETLKD ALDEDISRTA LILVGPVLKG EGFDESCLYS
241 REYDRRYRPQ SADSPWSSWS HGDD
SEQDB ID: 3101377ETN
Reference:
3101377
Name: cobyrinic acid a,c-diamide synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobB
Sequence:
1 MISAPASGTG KTTVMLGLLR ALAEDGLTVQ PFKSGPDYID PAFHLAAAGR ASFNLDSWAM
61 GERLLGAVAA QAAGADIVVA EGSMGLFDGV AKPGETGHGS SAETALRMGW PVVLVLDVGG
121 QAQSAAATAL GFRMYNPDLP FAGVILNRCA SPRHERLTRL GMERAGLPVL GVLPRRGDLT
181 LPERHLGLIQ AVEHPDLEAA IAGYAAFLRE HVDLGAIRAA ASSSPVGLSS APLPPPPAQR
241 IALARDAAFS FTYPHLLEGW RAGGAEILPF SPLADEAPAP DADLVWLPGG YPELHAGRLA
301 AAETFLSGLR KHAQTRPVHG ECGGYMALGE ALVDKDGSRH RMAGLLGLVT SYEKRKFNLG
361 YRRAELLAPL PGYGTGATLR GHEFHYSSIL EQPDAPLARV FDAEGVEGPQ TGSRRGNVTG
421 TFFHLIAEAG S
SEQDB ID: 3101377ETP
Reference:
3101377
Name: uroporphyrin III C-methyltransferase, Class: EC2.1.1.107
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobA-2
Sequence:
1 MSGFVSFVGS GPGDPELLTL KAVDRLGKAD AVLFDDLSSG PILAHARPDA DLVGVGKRAG
61 RPSPKQDHVS RLLVDYAQTG AHVVRLKSGD GGLFGRLEEE LVALRAAGIG YEIIPGIPSA
121 VAAAAAAGIP LTRRLTARRV QFVTGHDISG KLPPDLNLPA LADPQATTVV FMGKRTFPLL
181 LDALEAHGLP RSTPALMAES VSTPEQRLTR ATMGELAERL AEEVGTAPAL ILYGPLAEFS
241 DD
SEQDB ID: 3101377ETQ
Reference:
3101377
Name: precorrin 6A synthase, Class: EC2.1.1.152
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobF
Sequence:
1 MTELLLIGIG TGNPDHITRE GIAAIRAADL ILIPRKGAGK SDLAGLRERI IAEATDTPPQ
61 IAYFDIPARR AEDGYLKGVD DWHDAIALRW QAAIEEYPAA ARVALLIWGD PSLYDSSLRI
121 AARLDPQPKV RVIPGITALQ ALTAAHGIPV NELGAPFLVT TGRRLRDEGW PPATDTASVM
181 LDGECSFQAL EMADYHIWWG AYVGMEEQIL VAGPLDRVAS RIIETRARAR ADHGWIMDIY
241 LLKKRGN
SEQDB ID: 3101377ETR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRQGGNDMT TKTLKVSATG SAILPALFAV ILGLGIVTLA GHVQASALHD AAHDVRHATG
61 FPCH
SEQDB ID: 3101377ETT
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSRILTSAL FAGAAAGLIA ALLQFLFVQP VLLHAELYET GELVHFGAEA VSAQPDLPGM
61 FADPMRDALT VVFAMLTYTG YAVVMVALMS VAEGMGHAIT ARAGLLWGLA GFITFHFAPG
121 LSLAPEVPGV SYTDITARQI WWTATVAAAG IAMWLIAFGG NLMAYGAAAL LLIAPHLIGA
181 PEPESFAGPV PTELGALFAA RAFGVGMAAW VLLGGFAGHF WQTEGKRANA HA
SEQDB ID: 3101377ETU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRSLALFAI GLVFGGGAGF VTAAAYGVTF DGHDHGDAAQ HGAHDAAQAG HDHAEATHLP
61 AGPDAPGVSL ALTRDAMSGW NLRVSPQNFR FAPENASAMD HPGEGHAHVY VNGVKLARLY
121 GEWLHIPDLP KGPVEVKVSL NANSHSPLMV DGTPVEASLI VQVE
SEQDB ID: 3101377ETV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHICGTHQG VTMSDMRLSL CSSCLGDRDR DLAAERAAVT EALARAGLNG RVELVEHACF
61 GACATPVALA LQGVGRASYV FSDLDVVADA DDIAATCRVY LDSPGGWIAD ARPCGRLRQC
121 LLARIPAYST
SEQDB ID: 3101377ETW
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTRLKLKQL RLLVAVGERH SILHAAQALN MSQPAATKLI KDLELDFDVQ LFDRTNRGMV
61 PTVFGAALIR HGKLILAQIS HAAQELDDLN EGNGGRVVVG TLLAASAEFL PRVLTRLLTD
121 KPGLVVKLVE GTNEVLMPAL RSGDVDLVVG RLPMHRHRAE IMQERLFDEE VICVARTGHP
181 VHRHAAPALT DLMGYPWILP PAETTLRRQL DQVFVDLGGG APPYAVESVS YLANRGLLVG
241 SDMLAVMPAH VPRHDISAGA LARVDWPVPI PIGPVGVSMR KSASLSPSVA GVLDALRAEA
301 AQMTR
SEQDB ID: 3101377ETX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWKLWGSWPE GDRVRIALIG HGPIAAHVAA HLPVGVQLTG ALCRPGRDDA ARAALGVSVA
61 QALEGLPQRP DLLVDCAGHS GLRAHGLTAL GAGVEVLTVS VGALADAVFC AELEDAARAG
121 GTRLCLASGA IGALDALAAA AMGTGLQVTY TGRKPPQGWR GSRAEKVLDL KALTGPVTHF
181 TGTARAAAQA YPKNANVAAA VALAGAGLDA TRAELIADPG AAANIHEIAA EGAFGRFRFQ
241 IEGLPLPGNP RSSALTALSL LAALRQRGAA IRPSF
SEQDB ID: 3101377ETY
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: large
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIVDSRMQF RDLCPPGQAC RIKATDTVAE TPVTRSAPYT GQALPRREDP RLLRGEVRYA
61 GDIHLPGALH LAFLRSPYAS GQLVACDTSA ARAMPGVAAV LGVADLGALG GLQVNPVLPL
121 DHATPYPILA GDTVSAVGQP IAAVLAETPD QALDAVEEIS AEIEETPAPP PELLAMQHWQ
181 SGDAAVEFAR AAHVVAVRVA HPRLAPSPME PRAIAVLPEG GGLTVWLSTQ TPHRARADLA
241 RILSLDPAQL RVIARDVGGA FGMKASLYPE EVLAVWAAHH LGRPVRWTAS RSEEFLSATH
301 GRGLSSEGQL AIDAEGRFLA LKARVEAPLG HWLPNSALIP AWNAARILPG PYDIPATDLG
361 TSARRAHTAP TGIYRGAGRP EACALMERLA DAAARATGLD PAEIRRRNLH RANGPRDLPA
421 GRVEGADYVT ALNHFLTLAD YPAWRARRDA LRAGGALAGI GLGFYVEPSG KGWESARVTL
481 EAGRATVEFG GSSQGHGRET ALAQIAADAL DLTPADITVQ HGDTATCPPG IGALASRSTP
541 IGASAVLEAC GEITRRRDAG ETGPITADTI YTAPGEAWGH GCYLAAIEID RDTGAPHLTR
601 MACLDDAGQL INPLLAEGQV MGGFAQGLGE AMMEALHFDD GQLLTGSFMD YAMPRAADLP
661 PLTIHKTETL ATTNALGAKG IGEAGTIGAP AAILNAALDA LAPLGVSELQ MPLTSLSLWQ
721 AITDASKGCE T
SEQDB ID: 3101377EU
Reference:
3101377
Name: peptidase, Isotype: T4 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVPGPRNLIT DVPGLLVGNA QDDALKSGAT VLSAEAPFMA SVHVMGGAPG TRETDLLAPD
61 KSVARIDALV LSGGSAYGLD ACSGVSDALR AAGRGYRIAD AVIPIVPGAI IFDLLNGGDK
121 DWADNPYRAL GRAAFDAAGR DFALGTTGAG TGALTAMLKG GLGSASLVLP DGTTVGALVA
181 ANPMGSVTTP GDRHFWAAPF EIDGEFGGLG PDPSGGLGRQ LESRKIRMMS AQAQDRANTT
241 IAIVATDADL TKAQCQRMAV AAHDGIARAT VPAHSPGDGD LVFSVSTGAR PMAAPERDLT
301 LLGHAAALCL ARAIARAIYL ARPAPGDLLP CWHQA
SEQDB ID: 3101377EUA
Reference:
3101377
Name: dihydrodipicolinate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRGIWAAALN PFAEDLSFDE AGFRRNIRHW VDDLGIEGLF ICGKQGEFFS MSLEERKRNL
61 EVAVEECAGR AGTMMSVSDQ NFDTVLELAR HAQDVGADYI VVHAPVLHFV HDRDALLYEY
121 YKAISEAVDI GIAMWSHPDS GYLMSPELCT RIADLPNVVA IKYSVPREMY ARLTELAGDR
181 IQVSTASEEE WFDNIVELGW RLYLCSSPPY QLQTANDRRM HDYTQLAFAG RIDEARAIRD
241 SLDPVRQAIK STKPGGKPQA HGKYWQELLG QTGGRVRFPM QELTEAEKSA TRAAFAACGL
301 RL
SEQDB ID: 3101377EUB
Reference:
3101377
Name: thiamine pyrophosphate-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEMNGAESL VRSLLQSGVD TCFTNPGTSE MHFVAALDQV PGMRSVLALF EGVATGAADG
61 YYRMASKPAA TLLHLGPGLA NGISNLHNAK KAGSGVVNIV GQHAASHLEL DAPLTADIEG
121 LARPVSHWVE TSLSAADVGR DAARAVQAAR SAPGQVATLI LPSDTAWTPG GQVAPALPVP
181 TREPVEAEML EQAVAALSGP DSLLLLGGEA LSAENLERAG RIAAATGCAL LSEWANARVE
241 RGAGRVPVAR VPYPIDMALE ALSRFRRIVL LGARPPIGFF AYPGKPAVLT HPEAEIIALA
301 DWAADLDGAL AGLERAVGAA GVVPVLAPPV APGTVSGPCT PESVAAVLGQ HIPEGAIVVD
361 ESVTTGRAFH GATLGAAPHT WINNCGGSIG YSLAAAIGAA IACPDRRVMT LTGDGSAMYM
421 PQALWTMARE GLDITVVIWA NRSYRILLGE LSGVGVMNPG PRALDMLSLE RPAIDWVAQA
481 QSLGVPAVRV ERAEEFAVAL ERGFAEAGPK LIEVLL
SEQDB ID: 3101377EUC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSGIKGQAK ERPTMRLAIL ALITCLALPV LAGDLNPRPG WAVHATAKTH AQLVEDTRAA
61 ITANGLGIVT QAGPTEAAAR RGITIPGNRV IGAFNNDFAV RILALSTAAM IEAPIRFYVT
121 ENADGSATLG YKLPSQVFAP YLDEAGAELA AIAAELDARF AAVAAQAIAS Q
SEQDB ID: 3101377EUD
Reference:
3101377
Name: acetolactate synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPLPRAAD LLARRLYEAG CRHAFGMPGG EVLTLVDALD KAGITFHLAK HENAAGFMAE
61 AVHHRDGAPA ILLATLGPGA MNGVNVVANA LQDRVPMIVL TGCVDADEAL TYTHQVMDHA
121 QVFRPITKGS FRLTAEGSDI IADKAVSLAM QPRPGPVHID VPIGVAATPV RETRRRRLTP
181 AAPVAPGGTC LESARRWVAE ARHPLAVIGL DVLADGSKCV LQAFLEHFEI PFVTTYKAKG
241 ILPEDHRLCL GGAGLSPLAD GHLLPLVQAA DLILCLGYDP IEMRPGWREV WDPESQRVID
301 ISAVVNDHYM HQAGINIVAD TGATLEAIAK GTTGHATWPG GEPQAARAAL ARAFPQDEVW
361 GPAAIIAETR ATLPEGTLAT ADSGAHRILL SQMWRCDEPR GLIQSSGLCT MGCALPMAIG
421 LKLAEPDRPV ISFSGDAGFL MVAGELSTAA EMGGNPIFLV FVDASLSLIE LKQRGRQLPN
481 RGVDFGHHDF AAIGRAFGGH GHTVRSRAEL RAALEAAQAA DRFTVIAAEI ARGDYDGRI
SEQDB ID: 3101377EUE
Reference:
3101377
Name: CAIB/BAIF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGSEQPKGP LDGVRVLDLS RILAGPTCTQ LLGDLGANVI KIENPGSGGD DTRQWGPPYV
61 TDAEGNPSDL SAYFMAANRN KKSVTLDIST PEGQAQIRRL AAHADILIEN FKPGGLAKYG
121 LDYASIGPEF PSLVYCSISG FGQTGPNASK PGYDLMAQGF GGVMSLTGEP EGAPMKVGVG
181 IADVMCGMYA TVGILAALHH RERTGEGQHI DLALVDAQVA WMINEGVNYL TSGALPQRRG
241 NAHPNIVPYD LYATSDGHVV LAVGNDSQFR RVCEFLDLAA LADNPRFATN QARLQNRATL
301 DALLRPALAA RSKAEVIAGL EARKVTVGPV QTIDQVFASD QVAARQMQID MESQAGPVHL
361 IGNPLKLSRT PVTYRRAPPR CGQDTETVLS SDDPFAD
SEQDB ID: 3101377EUF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDDVFGQSN SLTRADSAEA WDGVLLGFMA HAAVTPQHLA RVLELEPDFA LAHAIKGLFM
61 LLLGRREMTP VAIEAMAAAE RAAAARAITA REGHYLAALR HWLAGNPSRS VQEFEAILRA
121 HPDDTLAMKL SHATRFVLGD PAGMRRSIER VMPAYAPDHA GRGYLLGCHA FALEETGAYD
181 KAEIAGRQAL WMVSDDAWGL HAVAHVHEMK GQSELGLDWL AGREAAWSHC NNFRYHVWWH
241 KALMHLDQGQ IDQVFDLYDS AIRKDKTDDY RDISNATSLL SRLELEGVNV GDRWEELADL
301 SAARTEDGCL IFADLHYLLA LTGDTREDAI SRMLHRIKRD ADMAQCDTTR RMADPGLAAA
361 QGLEAFGEGQ YGQAFDHLLT ARGSMQLAGG SHAQRDVFER ITIDAGLRAG RLDAVERVLD
421 DRRAKRGGHE DTYALARRAL IEAGRDDRNI HSVPAE
SEQDB ID: 3101377EUG
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIQKDQARMA TISPAADFAP TATAPRAAAT AARTRDLRLD FFRGIAMFII LVAHIPFNPW
61 AGWIPARFGF SDATEIFVFC SGMASAIAFG GAFLKRGWWM GTARIAFRIW QVYWAHIGLF
121 FFTAMSMAAL DLSGLFEKSY VDGLNLQHFF GDPMPQMLGL FTLTYIPNYF DILPMYLVVL
181 AMMPLMMGLR QVGFWAMALA SVLIWAVAQT GVLALPAEPW SDRQWFFNPF GWQLLFFTGF
241 AFMRGWIPAP PVNKALIWAA ALFVVLSAPF GSWKVFLWVD AWNPTVSEPI RATWKVTGEL
301 RDKTDFALLR YVHFLSLAYL GWVVAGDKGA RLLPQGDGAL ARAWQMVLNV ILKVGQQSLA
361 VFVFSMAAAR LLGVLLDIAG RDALSVLAVN LFGFALITAV AYGAAWFKSH PWKSRT
SEQDB ID: 3101377EUH
Reference:
3101377
Name: periplasmic glucan biosynthesis protein, Isotype: MdoG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mdoG
Sequence:
1 MMLSRRSFLA SVSVLALVPR AFAAAPAEPF ERAMVTALAR DLASRPYAPR PGVPDPWQAL
61 TYEQYRSIRF RIDHGLWAGT ETPFSVDFFA PGLYFPRAVQ VESVEAGMTR PVAFEMDMFD
121 TGPEVPPLPV DEALGFSGLR LRTEMHRPGE TDEFCVFQGA SYFRAIGLGE AYGLSARGLA
181 LKTGDPMGEE FPDFIRFWLE RPEPGQRAMV VHALMDSPSV TGAYRFEITA GEDTVMEVEA
241 TLFAREELDH VGLGPLTSMF LYDATDRTRF DDFRPAVHDS NGLLIRNGAG EVIWRPLANP
301 RALQISSFVD ENPRGFGLMQ RAREFSDFAD LEAHYHRRPG LWVKPHGDWG KGAVTLVEIP
361 ADQEIYDNIV AYWRPATPYA AGSEVTLSYR LTWGEEPHRT PLPRVIRTAM GDKTFGEGRL
421 VVIDFEASPL FDDAEGLEPI VQSPHAQIAP PVLQRNPDTG GMRLAFSFVP GEATLVELRA
481 QLRRDKEAAS EVWLYRWTA
SEQDB ID: 3101377EUJ
Reference:
3101377
Name: glucan biosynthesis glucosyltransferase, Isotype: H
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRVMRDDLH IMPPPAPLAM QAQDFSAGFR DALAPPDSPQ RDVAPWRVLA FSPAMAATLA
61 LVWLMGDWFS DSGISVLEAV LLALISFNFF WIAFAASTVL LGMLSLSRQP ARARAGRAEP
121 LKVALLMPVY NEVPWYVLGN ARTMLEELKA RGGQHQYAMF ILSDTRDDAI AAQEQASVEA
181 LRTTLAPDLA LYYRRRVENT DRKVGNIADW VAGWGGAWDA MLVLDADSLM TGRAIARLTD
241 ALARDPGAGL IQSFPQLIGA QSVFARMQQF ANGVYGAAFA EGMARWCGQE GNYWGHNAII
301 RTAAFANCAG LPKLRSLSGR EKLIMSHDFV EAGLLRRAGW SVRFLPRIRG SYEETPPTLI
361 DHVLRDRRWC QGNLQHLNLL NARGFRSVSR FHMFHGAIGY LMSPIWFALL VMWALIGHGQ
421 DGSVLQYFSP DNPLFPQWPE MTEGRHVLII VVMYAMLLLP KLLGVLALPL SGAHYSDFGG
481 AGRFLLSFLS EVVLSILYAP ILMVQQMIAV FRTFLGIQKG WSPQARDGGT YGLGTLVKCH
541 MLETLSGLAL GTGIALGLVS VWLAPIALSL ALAVPLSALS GVSAGTARRL IGMREEFREP
601 AITRSARAYR NELKTLLERG SRIHPAE
SEQDB ID: 3101377EUK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRAAVLALL AGLWGQGAQA GCAAEAAPCE TADGTYHIAL PEAENPPVLI FLHGHGGEGA
61 ATLRNARLVA PLLARGWAVI APDGQSRAPG RPRSWTFFPG WEGRDEPAFL AQVLGEASAR
121 FGLDADRAVL GGFSAGAFMV TYLACATPGA YRAYVPVSGG FWRPQPDRCA GPVHLFQTHG
181 WADPVVPLEG RFLGGGRFQQ GDIFAGLELW RQTNGCVEHK PDGFDQTGPF LRRRWQGCSG
241 GSLEFALFPG GHTVPEGWAD MMADWVEALP AP
SEQDB ID: 3101377EUL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGTAILTHP MGRRAVLALG GAVLAGLAVR EYLLTPEDFA GGDLSVEAAH EQANAGAVLL
61 VDIRRPDEWA STGVGAGAQP LDMRRADFVA ALDQLAGGDR ARPIALICAR GVRSARLANQ
121 LAQAGFTSII DVPEGMLGSR AGPGWLRAGL PVVAHAEAQE
SEQDB ID: 3101377EUM
Reference:
3101377
Name: pH adaptation K efflux system protein, Isotype: PhaA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaA
Sequence:
1 MSLFLIAALP FLGAIFPALL IRAGRNASAS AAGLTSFLAF TGLMIHAPTI LAGGVVTARF
61 DWLPVLGLNA NFMLDGLGFL FATLILGIGM LIILYARFYL SRHDPMGQFF TYLLLFQGAM
121 VGIVLSDNIL LLLVFWELTS LSSFLLIGYW KHLPEGRQGA RMALAVTGSG GLAMIAGMLI
181 LGHIAGSYDL SVILQHKAAI QASPLYLPAL ILILLGCFTK SAQFPFHFWL PHAMAAPTPV
241 SAYLHSATMV KAGLFLMARM WPVLAGTPEW FYIVATTGLV TMVVGAVIAL FKDDLKALLA
301 FSTVSQLGLI TMLLGFGTKI AAVAAVFHII NHATFKAALF MSAGIVDHET GTRDIKLLGG
361 LRRMMPITFG IALIAGLSMA GIPPLNGFIS KEMMLEETIH TVWLDSHIVV PALAIVGALF
421 SAAYSFRFIA HTFLGPEQES YPHSPHDPGP GLWLAPALLV VLVVVIGLNS TTVAGPLVKA
481 AAGAVIGGEL PYFKLKLWHG FAPALYMSIA AVLGGLLLLA LHRHLERFWN ALPRPEAKVI
541 FDAVIETLTA LSNRVTDGLH NGVISRYAAI MVAFTVGIGY YAYATGSMGA PTRVPLPATI
601 IPIIGWICLV GATLAIMWFH RNRLLSLVLI GVVGLIVSMA FNYLSAPDLA LTQISVEVVT
661 MILLLLSLNF MPTETPVDST NGRKLRDAAI SIVAGIGAGG LIYALMLRDF AFPTISEFHL
721 ANSYKGGGGT NVVNVILVDF RGFDTFGEII VLGIAALVIF ALTESVLATK VRAYLLNRKP
781 HWPQSGDAHP LMMVVVTRVM MPIALMVGAY IFFRGHNQPG GGFIAGLVVA IAFLMQYMAS
841 GFTWAAERQR FYYHATIGWG VLIAAATGLG AWFNDMPFLT SDFGYLHWPP LEEFEWATAM
901 LFDTGVFLAV LGAVMLTLES LSRFAWQPGM TQEFPMDINP AREALRQFVE ETKQKMAEKG
961 KTIDTEKGA
SEQDB ID: 3101377EUN
Reference:
3101377
Name: pH adaptation K efflux system protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEALLASAVG VLTAAGIFLI LRRRTFPVIL GLSLLTYAVN AFLFATGRLA LNAPPVLNKY
61 KEVVYTDPLP QALVLTAIVI SFGMTAVIVM IALSAYLSSR DDRIDMSAQD SVDAAGEDA
SEQDB ID: 3101377EUP
Reference:
3101377
Name: pH adaptation K efflux system protein, Isotype: PhaD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaD
Sequence:
1 MNHWIIAPIV LPALLAPFII MVLRYHLDLQ RIFSVAGTVG LVGIALTLTA QASGGAVQVY
61 ELGNWPAPFG IVLVLDRMSA LFVLLTSLLA LVVVLYAMGS GWDKRGRHFH PLFQFQLMGV
121 CGAFLTGDAF NLFVFFEVLL IASYGLMTHG GGAVRLKAGV QYVTYNLLGS TLFLFALGTL
181 YAVTGTLNMA DLAVRVAELP PEDTALLRVG AVLLLLVFCI KAAVLPLHFW LPASYANAPL
241 PVAALFAIMT KVGAYAILRM YTLVFGPDLA IAEGLAGAWL LPAALVTLAV GAIGILGTRH
301 IARMAAFGAI ASMGTLLIAV SLFTPQATAA ALYYAVHSTL AAALMFLVAD LVMERQGGRI
361 DGMPPMAQSG LIAVLFFIGS IALAGMPPLS GFVGKLLVMD AARDAGEFAA IWAMILISSF
421 ITIVGLARAG SLIFWQSHDE RHNTEPDPEN EDEVIHLPAP EPMPGLTFAA VFGLVAGLAA
481 LTLFAGPLMD YTRAMAAQLY EPQAYIDAVL KGGGK
SEQDB ID: 3101377EUQ
Reference:
3101377
Name: pH adaptation K efflux system protein, Isotype: PhaE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaE
Sequence:
1 MKLLRRIFPH PHLTLLLTLV WVLLANAPSL NSLLFGLILG IVIPFITQPY WPDRPKLRNW
61 PMVVEYMLVV LWDIVMANVT VAGIILFKRD ADRKPAWISI PLELRSPEAI TVLAGTITMT
121 PGTVSCDLSE RGLNLLVHCL DAPDPDAVRD EIKQRYERRL KEIFE
SEQDB ID: 3101377EUR
Reference:
3101377
Name: pH adaptation K efflux system protein, Isotype: PhaF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaF
Sequence:
1 MILTYAIYFT FACFGAAIMM CLWRIITAEG VGTRVLALDT MVINTIALMI LYGLTVGSEI
61 FFEAAMIIAM LGFVSTVAYA RFMLRGNIIE
SEQDB ID: 3101377EUT
Reference:
3101377
Name: pH adaptation K efflux system protein, Isotype: PhaG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phaG
Sequence:
1 MDQIWEITIA FFLIVSGVFG FVGSFGMIKL KDPMSRLHAP TKATTLGVGG VLIASILHSL
61 TLEDHVSLHE LLITLFLFLT APVTALFIAK WHIHRHETPE SLPPTGGDGR WATHAVEPDD
121 DTPEHTAN
SEQDB ID: 3101377EUU
Reference:
3101377
Name: selenide,water dikinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHTPPLPRTR DLVLIGGGHT HALVLRKWGM MPLAGTRVTV INPGPTAPYS GMLPGFVAGH
61 YDRAALDIDL VQLARFAGAR VVLGAVQGID LDQREIHVPG RPPISFDVAS VNVGITSAMP
121 EMEGFADHAI PAKPLGPFAA RWAAYLAGAG PARVAVIGGG VAGAELVMAM AHALRSRGRA
181 GQVTLIDRAR VLAGLGPGAA ARVRQAMVGL GVTLVEGVEI ARISAEAVEL GDGRQIEADF
241 ITGAAGARAY PWLAETGLDT HEGFIAVDAC LRSSDPMVFA AGDCAHLTDT PRPKAGVYAV
301 REAPVLYDNL RAALGAGHPR PYRPQSDYLK LISLGGKSAL AEKWGRVFAG PAMWRWKDRI
361 DRTFMDRFRD LPQMGQPALP ELHSAGLNEA LGDKPLCGGC GAKVGRAALR AALAPLPGMV
421 RNDVTPLPGD DAALLTTGGV RQVMTSDHLR ALAEDPVLMT RIAAHHALGD IWAMGAAPQA
481 ATATVILPRL SPELQQRSLA EIMAAATEVM RAAGAEIVGG HSSVGDELTI GFTLTGLCTQ
541 APITLGGGQP GDVLILTKPL GSGVLMAAEM AGRAPGADVA AAYALMTMDQ GPAARILGAA
601 HAMTDVTGFG LAGHLHGLCE ASGTGAELDL AAVPLMAGAL ALSEAGHRSS IFADNRALVP
661 GLPATGAAAL LFDPQTAGGL LAAVAPDQAD VCLADLVKAG YPAARIGELT QTPGLRLAR
SEQDB ID: 3101377EUV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALEFTTLPQ LYAHDYDTVI DVRSPAEFAE DHLPGAINLP VLDNEERARV GTIYKQQSPF
61 LARKLGAALV FRNAASHVEQ SLSHHEGHWR PLVYCWRGGQ RSGSFTWMLQ QIGWRAEVVS
121 GGYRTYRRLV NRYLYEDPLP HRLVALDGFT GTAKTEILAR LPALGVQMLD LEALANHRGS
181 LLGARPGGQP EQKAFESALA AALCRLDPTR PVVVEAESSR IGERILPPSL WAALCAAPRI
241 EIEAPVAARS AYLTAAYDDI LSDAETLTAR LDPLRYHRGH AVVEGWLALV AAGDKHGVTR
301 ALMEQHYDPA YRKSRASHAV QVAARLRSDT LDHAGIDTLT AQVAAVLKAL
SEQDB ID: 3101377EUW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCGRIANTLP SDAMARLFQA QPANDLPAVP NYNICPTNPV HVVRAGPGGR NLLAMRWGFL
61 PQWYKSETDG PLLINARAET LAEKPAFRAA CRQRRCLIPS TGFYEWTRPG GDVRLPWYIH
121 RRDGAPIAFA GIWQDWGPEA ARQPTCAIVT TAANRHLGQL HHRMPLILEP DDWPLWLGEA
181 GHGAARLMQP GAEEVLDYHR VDPAVNSNRA SGPDLIEPFD G
SEQDB ID: 3101377EUX
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLHVFPPSP NSRKVLVVNA HLGLNLPVAL VNLATGEQLA PGFVALNPNA KVPVLEYDDG
61 STLWESNAIM ARLCAETETS LWPKSDIRYD ILRWQYWETA HWTPALSPFI SRHIFGQMDA
121 DLETAATQVA RYAAVLDSHL AGRDWLVGDG MTLADITLAC ILSLRDQCHY PLEGYANIHR
181 WIAAIEAVPA WQSVEAQVQQ VLAKVQAAS
SEQDB ID: 3101377EUY
Reference:
3101377
Name: TPR/sulfotransferase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLDPTPALS ALRSGDFRTV QKLARRALKL AKGDPGWLNL AAIAESGLGR PKAALPHFQL
61 ALKLAPDFHD ARRNLAQTLV ILGRLDEAER HLQQLTGTNP QDAEAWALLS QAAMGRGDGD
121 AALAAADRYV DLRPGQARGL MLRATLHGRL GDEAAALADL QQAQMAEPDN VDLLIALSLP
181 LARADHPGAA IDVARRAVEL APRHIPARLT LAMRHVEQGD SDAAKAMYHR VLEIAPDQAE
241 ALEQLAHLND AAENQRLAPQ VQTALKTAEA GSLDKAQLHF ALARIAAQSA DDDGLARNLT
301 RANATMARLM PYDAGADTRL SEALMARFAP GADCDGPGDG PAPFYVLGLP RSGTSLTEAV
361 LGAHPVVHPL GERIAPGRLL APLIDGGLPF DAQARAAFRK GEAASLPALP EGTRFYTDKM
421 PENYRLVGFL LAARGDARVI HLRRDPRDVA LSLWQAHLAG SALNYAYDLG AMAHRFNLYA
481 RMMAHWRAIF PDRILDLPYE ELVADVTRAS QRLAEWLGLV WDPEMARPER STSQILTLSA
541 SQLRQPVHTR SVGKWRKHEA MLAPFIAGLD PGLWPELGQS GI
SEQDB ID: 3101377EV
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRFVAAAFA CVLAVPALAE GDAAKGEKGF NKCKSCHMIE SPAGETIVKG GKTGPNLYGV
61 VGRAAGTYEG YKYGDSLVAA GEKGLVWDEE SFVAFTQDPK SFLNTYLGET AAKSKMTFKL
121 KSGGEDVFAY LQSVAAE
SEQDB ID: 3101377EVA
Reference:
3101377
Name: Ser/Thr protein phosphatase/nucleotidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFTRFMTSVA ALGLTAGMAA AEYKLTILHT NDFHARFEPI SKYDSGCGAE DNAEGKCFGG
61 TARLVTAIEA ARARAGNAIL VDGGDQFQGT LFYTYYKGKV AAEFMNKLGY DAMTVGNHEF
121 DDGPEVLRGF MDAVSFPVLM SNADFSGEEL LATKLLKSTV IEKGGEKIGL IGLTPEDTHE
181 LASPGPNISF SDPVPAVQGE VDRLTAEGVN KIIVLSHSGY GTDQRVAAET TGVDVIVGGH
241 SNTYLSNVSD KASGPYPTVV NGVQIVQAYA YGKFLGELNV TFDDAGNVIE AVGEPLIMDA
301 TVSEDTATVA RIQELAVPLE EIRNKVVANA AAPIEGSRDV CRVQECQMGN LVTDAMLERV
361 ADQGVTIAIA NSGGLRASID AGEVTMGEVL TVLPFQNTLS TFEATGALIV EALENGVSQA
421 EEGAGRFPQV SGLTFTWDSA QPAGSRIVEV MVASEDGFVP LDLTGTYMVV TNNYVRNGGD
481 GYAMFSGDDK NAYDYGPDLA DVTAEYLAAN APYQPYLDGR IVKK
SEQDB ID: 3101377EVB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLIYKIFRAD EWAALERDGQ SVGAPVDLAD GFVHFSTAEQ AGETAAKHFA GAEGLVLLAC
61 EADAMGDVLK WEVSRGGALF PHLYRELRLS DVLWSQPLPL VDGIHRFPQE MT
SEQDB ID: 3101377EVC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGYIDPDRA QFEAFKALDR DHPIEMLNLV KFRDRAAYPE GHELANAGLS GAEAYRNYGR
61 ETAPVIARLG ASIVWRGTFQ TVLIGPGDEV WDEMFIARYP SGHAFLEMVT DPAYRQAVVH
121 RQAAVETSRL IRTKPGTGGT SFG
SEQDB ID: 3101377EVD
Reference:
3101377
Name: dihydroorotate dehydrogenase, Class: EC1.3.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrD
Sequence:
1 MIERLGLTAL HRLDPETAHG LSIKALKAGL VPLPGPVTST RLRTRVAGLD LPNPVGLAAG
61 FDKNAEALAP LARAGFGFIE VGAATPRPQP GNPRPRLFRL TEDRAAINRF GFNNQGMEAI
121 AVRLAKRPRD AVIGLNLGAN KDSSDRPGDF ARVLAHCAAH LDFATVNVSS PNTEKLRDLQ
181 GRAALTALLS GVIETRDALA RPIPVFLKIA PDLSKDEIAD IAAVARDTGV DAVIATNTTL
241 SREGLHSAHK DEAGGLSGAP LFDKSTRVLA RLSALTDGAI PLIGVGGISN AEQAYAKIRA
301 GASAVQFYTA MVYGGLALAA EIARGLDALL ARDGFASVAE AVGTRREDWL
SEQDB ID: 3101377EVE
Reference:
3101377
Name: arsenate reductase, Class: EC1.20.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: arsC-1
Sequence:
1 MIEYWHNPRC SKSRQGLALL EERGAEIELR RYLEDAPSLE ELRATQAALG VSAIAMMRTG
61 EARFKELGLS KSDPDAVLLA AMAESPVLIE RPLAIKGDRA VIGRPPEDML SLLD
SEQDB ID: 3101377EVF
Reference:
3101377
Name: DNA-damage-inducible protein, Isotype: F
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dinF
Sequence:
1 MSDAAPITHQ RVLKIAVPIM LANMTVPILG AVDTAVVGQI PQAAPIAAVG VGAIILSAIY
61 WIFGFLRMGT AGLTAQAHGA GHEGEVAALL TRSLMIGVAG GVALILLQLP IYWGALAVSP
121 ASAEVETLAR GYMSIRIWSA PAAIAIYGIT GWLIALERTR AVLVLQLWMN GLNMGLDLWF
181 VLGLGWGVNG VAFATFLAEW TGLAFGLWLC RDAFLNPRWR DWARVFEAAR LRRMAVVNTD
241 ILIRSMLLQA IFVSFLLLGG RFGDVTLAAN QVLLQFVHIT GYALDGFAFA AESLVGQAFG
301 AGAVARLRRA AWMTSLWGLV LALLLAVVFW ALGPWLIDVM TKDPAVQLAA RDYLAWMVAA
361 PLLILALVMF DGIFIGATRS ADMRNMMALS AAIYFATVWL LIEPYGNHGL WMALTISFIA
421 RGITLGLRYP ALERAAVSPA G
SEQDB ID: 3101377EVG
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARTRPEPMQ VVKQRRDAAL NALVSGVPFI RFLNITFDRR GDELTGVLNF DDKLIGNPFL
61 PAIHGGVTAA FLEVTAVITL SWAHLFERIE SGDLAPEDIL TDENMRFPKT IDFTIDYLRS
121 GLPRDAYARA YISRAGRRYA SVRVEAWQDH HDKLYAQGTG HFLMPQDPGP ES
SEQDB ID: 3101377EVH
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSCPVHKGAK QRQDRRHMTD KVKLARQFIQ AIPHAKALGL ELTYIGQGEA EISMPYNAEL
61 VGDPRTGVIH GGAVSAMLDT CCGAAVMSHP SAPGGTATID LRIDYMRAAT PGQTITTRAT
121 CHHITRNVAF VRAVATDDDT DRPVATAAGA FTVEGR
SEQDB ID: 3101377EVJ
Reference:
3101377
Name: transcriptional regulator, Isotype: merR family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPETRLSFKE MCAEFDVTPR TLRYYEYIEL LQPDREGRAR YYGARERARM KLIMRGRRFG
61 FALEEIRQWL LIYEDEGNQA QMAAFVEMAD RQMHELRLQQ QQLDEAMSEL QQLRDQTARG
121 IK
SEQDB ID: 3101377EVK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNPVALVTL TLAALMLAAC DPGPTGHGTA PAGVDQADWD RQIAARRQAR SDVYRGPRGG
61 ATGR
SEQDB ID: 3101377EVL
Reference:
3101377
Name: transcriptional regulator, Isotype: merR family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEDLMTIRE MCDAYDVTPR TLRFYESKEL LFPVRDGQKR LFTKRDRARL KLILRGKRFG
61 FSLEQIRQLL DLYHVGDQQH MQLNRTYQIA HERLADMESQ RDELTQAIDD LREQLRWGEK
121 VLASMKDTKK AAE
SEQDB ID: 3101377EVM
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIYTAPTKD TQFILHDVLK VSQSDTPGYA ELDADFTGAV LEEAGKIATN VLHPLNIVGD
61 TEGCRLENGV VYTPTGFKEA FEQVKEGGWT GLDMPEQYGG QNMPQVIGTA VGEMFSASNQ
121 AFTMYQGLTH GAASAILAHG TDAQKDTYLP KMVSCEWTGT MNLTEPHCGT DLGMMRTKAE
181 PQGDGSYKIT GQKIFISSGD HDMADNIVHL VLAKITGGPE GIKGVSLFIV PKFMVNEDGT
241 LGARNAVSVG KIEEKMGIHG NSTCVMNYDG ATGYLLGEEH KGMRAMFTMM NEARLGVGMQ
301 GLAQADAAYQ NALEYAKDRL QGRDVTGVKN PEGPADPLIV HPDIRRNLMD QKSFTEGARA
361 FLLWGATLID AAHRAGDKDA DGLVSLLTPV IKGFLSDQGY DMTVQAQQVY GGHGYIEEWG
421 MSQYTRDARI AMIYEGANGV QALDLVGRKL AADGGKHVMA FFELVKSFCK ENAGQDEAYD
481 KAFIEPLKAA SKDLQAAGMY FMQNGMKNPN NALSGSYDFM HMFGHVCLGL MWAQMAKAAR
541 TALDGGASDT AFYETKIATG RFYMARRLPA TALHLARIQT GADTVMALDA ANF
SEQDB ID: 3101377EVN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKRFRLTRR FPVAMTEDGY RRLKSFSREA GLDEGEALSF LFENFNSVIN EENLIHRLRL
61 FNAELDDRKR
SEQDB ID: 3101377EVP
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTIKLYCFG ESGNSYKAAL ALQLSGLDWE PVFVDFFGGE TRTPEYRTTV NELGEAPVLV
61 DGEFRTSQSG CIQAYVTEAS GKFGGKTREE NYDILRWVLW DNHKLSSMAG LTRFLMNFLP
121 EDKRPQEVIA FNQGRLKAAY ATLNSHLEGR DWIVGVGPTN ADLSCCGYLY YPEPFGFDRA
181 DWPHIDAWLD RIAALPGWKH PYDLMPGNPS DRA
SEQDB ID: 3101377EVQ
Reference:
3101377
Name: Ac-CoA acyltransferase/thiolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEAYIYDAV RTPRGKGRKD GSLHEVTSVR LSALTLNALK ERNNLEGHAV EDVIWGNVTQ
61 VMEQGGCLAR TAVLASDLDQ SIPGLAINRF CASGMEAVNL AANQVRGGAG DAYIAGGVEM
121 MGRVAMGSDG AAIAVDPSIA METYFVPQGI SADIIATEYG FTRDQADALA MESQRRAKEA
181 WDEGRFAKSV IPVRDQNGLT ILDHDEYMRP GTDMQSLGGL NPAFQMMGEQ MPGFDKIAML
241 KYPHLERINH IHHAGNSSGI VDGAAGVLIG NKEFGEKYGL KPRARIKATA KIGTDPTIML
301 TGPVPVTEKI LADNGMKIGD LDLFEVNEAF ASVVLRFQQA FDVDPALVNV NGGSIAMGHP
361 LGATGAIIIG TLLDELERRD LETGLATLCI ASGMGAATII ERV
SEQDB ID: 3101377EVR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKLDLDSIE RRIGSVYPGR LNAAMDGRSS LRLGDAGGLS QFGVNLVRLE PGAKSSLRHY
61 HMEQDEFVMV TEGALVLVDD QGEHPMVPGD CAAFPAGDPN GHQFVNRTDA PATFLVVGTR
121 TPTETAYYSD MDMMVKQDAS GFAFTRKDGS PLTADQIGDD NE
SEQDB ID: 3101377EVT
Reference:
3101377
Name: fatty oxidation complex, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabJ-1
Sequence:
1 MSDFTLTKDA DGVAFITWDA QGKSMNVMTR EAFELVDSLV DQALADDEVK GIVITSGKSD
61 FAGGMDLNTL AVIREEAGEN PAQGLFDFVM GGHRIMRKLE LAGMDPKTKK GGKPVACAIN
121 GTCAGIGTEI ALACHHRVMT TNPKAKIGLP EILLGIFPGG GGTIRYSRMV GAMAAAPVLL
181 EGKMMDPAKA KGAQMVDALA DDPVAAAKEW VLNAKDADLV KPWDAKGYKM PGGAPYHPAG
241 FMTFVGASAM VNGKTQGAFP APKALLSAIY EGALVDFDTA LRIEARWFTH VLMNPSSSAM
301 IRSLFINKQA LEKGAVRPKD IPDQRVKKLG VLGAGMMGAG IALVSAQAGM EVVLIDRDQA
361 AADKGKAYTE AYLDKGMKRG KVTAEKKEAM LGLITATPDL DALKGCDLII EAVFEDPGVK
421 AEMTKKVEAI IPEDCIFASN TSTLPITGLA KASVRPEQFI GIHFFSPVEK MLLVEIIKGK
481 ETGPRAVAKA LDYVRQIRKT PIVVNDARFF YCNRCIIPYV NEGARMITEG VSPVLIDNAA
541 RQLGFPVGPI QLTDETSIDL GAKIARATKA AMGNAYPESP ADDLIFWMEE LGRMGRKANA
601 GFFDYDDKGK RTGYWQGLQD KYPLAEEQPD LIEVQERLMF AQVLEAVRAL EEGVLEDIRE
661 GDVGAILAWG FAPWSGGPLS WIDIIGTPYA ADRCDQLAAK YGERFACPPL LREMADKGQS
721 FYGRFDPEAK SAA
SEQDB ID: 3101377EVU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTALMFGWK DKDTGESPAM AESMAVLDGL LITGQGGLLA GTSVASNFGW QPVEALKVGD
61 KVLTFDHAMQ TVADIQRETV TLPAGLPAAL RPVRLPEGVC HNRRDLWMMP DQGLLVECEA
121 ALDALGDPYA VVPARMLRGY RGITDDLPGE RVEVTTLAFH QDEVIYVEGG LLAHCPVPRQ
181 VLDGADLLQP TLYDRLDGAA ARFLVNCLID DDDDHALGCD PADLPNLPMR PPRPGHPLAA
241 NPFA
SEQDB ID: 3101377EVV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIISPGRGYI FVHIPKTGGT SLALALEARA MKDDILIGDT PKAIRRRGRL KGVQARGRLW
61 KHSTLADIEG LIAPEVLAGL FAFTLVRNPW DRAVSYYHWL RGQTFDHPAV HLARQLEFEG
121 FVTAPQTLAA FRAAPAPSYM RRVDGVEHCA AYIRLEHLET DLAPLTAHLG FALDMPRANR
181 SERAADYRSY YSDHAAEALG AACASDIARF GYRFD
SEQDB ID: 3101377EVW
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAETNSAPL AAALYMIAAM SIIGVIDNYV IRLAESIGLW QFHFMRSLMM LPLVGLMSLM
61 GLGGLFPRRK GWVLLRSLLL TVAMLFYFSA LAFMPIAQAL AGLFTSPIFV LLVTAFGLRQ
121 RIGPWRILAV LMGFAGILFV LQPDPGAFDA TVLIPVAGGF FYALGAVVTR RHCAGESTAA
181 LLGAMVTALG LTGLGGLIWL ALFPATPLPG PDGFVARGWV WPMAEAMPWV ALQAVGSATA
241 VFMLIRAYQL GEPSYVSVFE FSVMIFGPLF AWVVLGVGLG PWQMLGIGLI VLAGAIIALR
301 SG
SEQDB ID: 3101377EVX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPSDTLPGL LPAAPGTAQP VCRWPAKGVG WPKNKNEHPV SGMTALKQYE RIEATGLWRP
61 SPEAQRREVV VSIGEATLTI SDFNDRALTH WSLAALERQN PGEFPALYCP DGDPGETLEL
121 AESESTMIAA IDHLQRAIDS RRAHPGRIRW ITVAVMVTIV LGMLTLWLPG ALRRHVVAVV
181 PEIKRQEIGR AVLARVERVT GQACSDEETD MILSRLAQRT GVRRLVVVPG GRASSLFLPG
241 GIVVLNHALI GDHEDSSVAA GYVLAERARA NAQDPLDDLL YRAGPLASFR LLTTGGLTPG
301 ILDSYAERVL AEPRPDMPDE ALLAVFSQAA IPSSPYAYAR DITGETVLGL IEADPMTGRT
361 LEPVLADRDW VRLQDICGG
SEQDB ID: 3101377EVY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGGPSRFRCL SAARAGRGRW RRGRCVARGQ SKPQGRLGPV GIGPFAVFHS NGSGVGLDRQ
61 QGARQVARPE LFHLCVPLGG PHAAQGVQPV ILAVDGPEPG RGLKAAVLDR RAQRAFSAMG
121 IQPVVGPDRA KSLRYLQIGG VLPLVIDMLR HHPGVERDPD AGIPHLERGT LAGAIGDRRF
181 RLRAAAHTGL VDVTLAEGRG IGTPARCRRR GNRARLDPRR SRGRGNRYDH RCRARGGGTG
241 GGHSDRAHGG ADRGHRGGAR HGAGHRAHLR FRRGRGGGSG RGCRGGPRGR CRAGLIQRDH
301 LGGGLLRRGA GRPGHGGGLV ATDLLALARD ARDPGHIAVD PGPDIDTSAA VDILLALEGG
361 GRKFGRRRGI SQRLGVQRAE PDAQTDDRKC NNPCNSHACP HKIWKAGCRK TY
SEQDB ID: 3101377EW
Reference:
3101377
Name: isopentyl diphosphate delta-isomerase, Class: EC5.3.3.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGILIPAWVD DRLVPVDKLE AHEKGLKHKA VSVFAVRDMD ILIQRRALGK YHTPGLWANT
61 CCTHPDWDES ASTCAVRRLR EELGITGLYP EYRHRLEYHA DVGNGMVENE VVDVFLAHVR
121 GPLQVVPNPD EVMEIRWIGY HDLLAEVQRY PERFTPWLKI YLHHHADTIF GPDLIISAKA
SEQDB ID: 3101377EWA
Reference:
3101377
Name: uracil phosphoribosyltransferase, Class: EC2.4.2.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: upp
Sequence:
1 MNEHLTVVDH PLVQHKLTLM RDKGTSTASF RQLLREITQL LAYEVTREMP LTTRTIETPL
61 EEMEAPILAG KKLALVSILR AGNGMLDGVL ELVPSARVGF VGLYRDEETL QPVQYYFKVP
121 EGLQDRLVIA VDPMLATGNS SAAAVDLLKQ AGATDIRFLC LLAAPEGVAR MKEAHPDVPI
181 VTASLDRALN SKGYIMPGLG DAGDRMFGTK
SEQDB ID: 3101377EWB
Reference:
3101377
Name: adenosine deaminase, Class: EC3.5.4.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: add
Sequence:
1 MSEEHPPVAD LPKVELHLHH EGAAPPALIR QLAHEKKIDL RGIFKPDGSY DFRDFAHFLS
61 VYEAASSVLT GPEEFRRLTW AILEQSAENG VVYSETFLSP DFCGGGDVAA WRDYLAAIRD
121 AADEAEAKLG ITLRGVVTCV RHFGPDQARR AARCAAETAG DWIVGFGMGG NEGVGKQGDY
181 SWSFDCAREA GLRLTTHAGE FGGPDSVRDA VRVLGVERIG HGVRAIEDAD LVHELADRGI
241 TLEVCPGSNV VLGLYPSFAA HPIARLRDAG VRVTISTDDP PFFHTTMRRE YEMLAKAFGW
301 GAEDFADLNA TALRAAFCDE DTRSRVAKRL ETS
SEQDB ID: 3101377EWC
Reference:
3101377
Name: phosphopentomutase, Class: EC5.4.2.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: deoB
Sequence:
1 MTRAFLVVMD SVGIGGAPDA DTFFNGDRPD TGANTLAHIA QACARGAAEE GRSGPLHLPH
61 LDRLGLGAAT RLASDAATPG LAAEASGLWG CAREHSRGKD TPSGHWELAG LPVPWDWHYF
121 PDTIPAFPND LVQAVAQAAG SDGILGNCHA SGTVIIDRHG AEHMRTGQPI CYTSADSVFQ
181 IAAHEETFGL DRLLALCKAV APRLHAMKVG RVIARPFVGT PEAGFTRTTN RKDFAITPPA
241 PVLTNWAQDA GRRVHGVGKI GDIFSMQGID DVVKGSDAEL MTHLARLIGT AEEGSLTFAN
301 FVEFDSLYGH RRDISGYARA LEWFDREIGQ ILQSLRPGDL MVLTADHGND PSWSGTDHTR
361 EQVPVLVAGR GAGQIGQVNF ADIAASVAAH LAIPAQGPGR SFL
SEQDB ID: 3101377EWD
Reference:
3101377
Name: thymidine phosphorylase, Class: EC2.4.2.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: deoA
Sequence:
1 MDARAIIARL RRHEVPSAAE LTWFAQGLAD GSVSDAQAGA FAMGVCMGRL GSEGRAALTL
61 AMRDTGDVLH WDFDGPVIDK HSTGGVGDCV SLVLAPALAE CGTYVPMISG RGLGHTGGTL
121 DKMEAIPGVT TQLGPDRLAQ VVRDTGAAIV GATARIAPAD KRLYAIRDVT ATVESLDLIT
181 ASILSKKLAA SPDALVLDVK LGSGAFMKSP DEARALALAL TETANAAGCR TSALITDMSQ
241 PLAPSLGNAL EVGEVMRVLT SGHADDPLAQ LSAELGGVLL SDAGLATDAV SGAARIAAII
301 SDGRAAERFG RMIAAVGGPV QFVENWQRFL PEATVIREVP ARASGYVTAI DGEVLGLAVV
361 ALGGGRQVET DVVDPAVGLS RVIRLGTAVN PGTPLATIHA ARQEAAEAAE ATLRAAITIG
421 PEPVAAPPLI HERITP
SEQDB ID: 3101377EWE
Reference:
3101377
Name: cytidine deaminase, Class: EC3.5.4.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cdd
Sequence:
1 MSLKSAALTV RENAHAPYSR FKVGAAIRGA SGVVYAGCNV ENIAYPEGTC AEAGAIAAMV
61 AAGETRLSEV YVVADSPAPV PPCGGCRQKL AEFGDPDVVV TMANLDGVET AMTIGQLLPG
121 AFGAAHMDKG
SEQDB ID: 3101377EWF
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLGKPGFSR NMVAARLAKG GRSRHSRAPR EDPMTDTIAE MRLPTQELRD DIPFYTKVLG
61 MRMDMIYPAD DPRIAVFSGH GLRLRIEKGA PESPGTLRIL TEDPDGFADC QRSLTAPNGT
121 RIEIEERHPP LVMPQTEHTF VVRRLKDQAP WIIGRAGMHY RDLVPSRLGG SIIASHIRIP
181 DGGPVPDMVH FHRVGFQLIF CIHGWVDVVY EDQGDKMRLT AGDCFIQPPE IRHRVLEASD
241 NVQVIEIGVP AEHVTEIDHE MMLPTPHLRP EREWQGQRFV YNRAEGAEWS PFRLPGYIYR
301 DTTIAENTKG VAGVQVVRRG QGAPQWAAHD TDILFTFVMN GTVTLMGEGR DPYPLEQGDA
361 FVIPPGMRTC LSDPSDDVEL LEVTLPGTFT TTLG
SEQDB ID: 3101377EWG
Reference:
3101377
Name: malate dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDQPSLRQA ALDYHAFPKP GKLEIRATKP MANGRDLARA YSPGVAEACL EIKDNAAHAE
61 TYTARGNLVA VVSNGTAVLG LGNIGALASK PVMEGKAVLF KKFAGIDCFD LEVNESDPEK
121 LADIVCALEP TFGAINLEDI KAPDCFIVEK LCRERMNIPV FHDDQHGTAI VVGAAARNAL
181 HVAGKAFGDI KIVSTGGGAA GIACLNMLVK LGVKRENIWL CDIHGLVYEG RAEDMNPQKA
241 AFAQATDLRT LDDVIAGADL FLGLSGPNVL KPEMVARMAK RPIIFALANP TPEILPDAAR
301 AVAPDAIIAT GRSDFPNQVN NVLCFPFIFR GALDVGATEI NDAMQIACVE GIAELARITT
361 SAEAAAAYQG EQLTFGADYL IPKPFDPRLV GVVSSAVARA AMESGVARRP ITDLEAYRQK
421 LNQSVFKSAL LMRPVFEAAA KAARRLVFAE GEDERVLRAA QAILEETTET PILIGRPEVI
481 EARCEKMGLS VRPGQDFQIV NPENDPRYYD YWTSYHQLME RRGVTPDIAK AIMRTNTTAI
541 GAIMVHRGEA DSLICGTFGE YRWHLNYVEQ VLGSKDLRPH GALSLMILED GPLFIADTHV
601 RSRPSPEELA EITLGAARHV RRFGIEPQIA LCSQSQFGNQ AEGSGQRLRQ AIEILDSRPR
661 DFVYEGEMNL DSALDPELRQ RIFPNSRLYG AANVLIFAHA DAASGVRNVL KMKANGIEVG
721 PILMGMGNRA HIVTPSITAR GLLNMAAIAG TPVAHYG
SEQDB ID: 3101377EWH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGHCHCGAV RWQSDGKVAW SCYCHCADCR RNCAAPVTAF FGLPHESVTW SGDAPRIYRS
61 TDRVERLFCG TCGTQMAYRN ADDRVNIHLY TATLEDPSAL PPRFHVFHTA RLPWLDLQDD
121 LPRFDRTAG
SEQDB ID: 3101377EWJ
Reference:
3101377
Name: propionate-CoA ligase, Class: EC6.2.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: prpE
Sequence:
1 MAYQDVYESW KSDPEAFWME AAKSIDWVEA PSRALDDSNA PLYEWFTDAK VNTCWNAVDR
61 HVEAGRGEQT AIIYDSPITH TKRQISYVEL RNRVAMLAGA LRAKGVEKGD RVIIYMPMIP
121 EALEAMLACA RLGAVHSVVF GGFAANELAV RIDDAQPKAI IAASCGLEPG RVVHYKPLLD
181 GAIDMAKHKP EFCVIFQREQ EVAHLEEGRD YNWHGFQYGV EPAECVPVEG NHPAYILYTS
241 GTTGAPKGVL RPTAGHLVAL NWTMKNIYNV DPGDVFWAAS DVGWVVGHSY ICYGPLIHGN
301 TTIVFEGKPV GTPDAGTFWR VISEHKVKSF FTAPTAIRAV KREDPKGEML AKYDLSHLKA
361 LYLAGERADP DTIIWAQKAL SVPVIDHWWQ TETGWTIAGN PLGIEELPTK LGSPAKAMPG
421 YDVQILDEGG HQMKPGELGA IAVKLPLPPG TLPGLWNAEA RFRKSYLEHF PGYYETGDAG
481 MIDEDGYLYI MARTDDVINV AGHRLSTGGM EEVLAGHEDV AECAVIGVSD DLKGQMPLGF
541 LCLNNGCNRD HGDVVKEVVK LVRDKIGPVA AFKLAVVVDR LPKTRSGKIL RGTMVSIADG
601 KEYKMPATID DPAILDEIKV ALQSLGYAK
SEQDB ID: 3101377EWK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFPHARVPD RPGLLCRPAR LARACKRGAA YSGHRRTDRH LVLLLGRHGR PRGGGRLGPS
61 HLRPVVFGRW HPGGAAGRGR HHLHGAQDRA GRPAGRGRYR TAPRLAHGRG RRDALPARRH
121 QLSDRRPGDQ RSGHHQPQPR RLWPGARLRH SGAQGMKRLS LALALLASPA LAQDFSAGST
181 AKPWNLYAEQ PAFFEAKVVD LLCELTGDCP ADCGAGKRQL GLLRSADNVM VLPLKNGQPV
241 FSGAAADLAP YCGQTVEVDG LLIDDPDLGA KHVYQVQKIR LPGSEWETAN RFTKVWEEEN
301 PEATGKGPWF RRDPRVLDHI EDRGYLGLGL EVDEAFIKEW F
SEQDB ID: 3101377EWL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAFLTALAC CAALPALPAL ASEGQRIQVT GELIDTWCYY SGVMGGPEAV VGSAHHTCAL
61 WCSAGGIPVG LQAEDGTIYM VLKIEQDDQL AGGDTALRLA SHTVEADGMH YQRDGINYLI
121 VDQVISDLDI TNLNHEDYGP VPGFAIPEPK E
SEQDB ID: 3101377EWM
Reference:
3101377
Name: SCO1/SenC family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLLLRAALL VGVALAAPAQ AGNAPLPFDV GGPFELTDQH GARRSQADPQ GHGQLLFFGY
61 ATCPGICSAA MPMMADAVDR LAEAGIPVTP VMITVDPERD RPGEMNAPLA RYHPDFIGLT
121 GSEAELQAAY SAYSVERELA YVDPEYGPVY THGAFIYLLD AKGEVLSLFP PILSSDRVVE
181 LARKYLGSEG
SEQDB ID: 3101377EWN
Reference:
3101377
Name: amidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDTALWQLD ATQIAAQTTS GALSAEQAVG AAIERMQAVN PDLNAVVDSC AEAAMDRARA
61 LDKARAAGTP CGPLHGVPVT IKVNVDQTGY ATTNGVTALK DMIAPDDAPV VRNLQAAGAV
121 VIGRTNTPEF SFRADTDNPL YGRTHNPWGR HISPGGSSGG AGSAVMAGIG ALAHGNDIGG
181 SLRFPAAANG AVTVKPGLGR VPAWNPSQKA ERGMLAQSMS VQGLITRSAA DLHLAMPSLI
241 APDPRDPFHV PLPWRGTPVE GPIRVAFTKA TYGYDLHPEV EAALDTARDA LRDAGYLVEE
301 VETPDAFEAG RAGYRALMGE VWALMKADVD AYGSQTVRDI FEVYFQEFPP FHGTELLQVM
361 AARSHYAREW SLFLEQYPLV LGPFLPQPFF GPDRDTEGAE GVHEALGSAV WSYAMNFIGL
421 PAACLPTRLA DLPKGAQPIN VQITARRWRE DMAVDAAAAV EARVGRMAPH LWARMG
SEQDB ID: 3101377EWP
Reference:
3101377
Name: ATP-NAD kinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKRIAFLAS DAPVAQTARA ALVGRYGNAA PRDAEVIVAL GGDGYMLRTL HSTQHLDVPV
61 YGMNRGTIGF LMNEYAETSL LERLAAAEEE IINPLSMTAM DQAGQIHRAL AINEVSLLRA
121 GPQAARLKIS IDGRLRLAEL VCDGALVATP AGSTAYNYSA HGPILPIGSD VLALTAIAAF
181 RPRRWRGALL PKTAKVRFDV VDADKRPVMA DADSTSITDI DWVEIQSEPT IRHRILFDPG
241 HGLEERLISE QFT
SEQDB ID: 3101377EWQ
Reference:
3101377
Name: Ser hydroxymethyltransferase, Class: EC2.1.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glyA-2
Sequence:
1 MNASHQDTGF FTEALSERDP ELFGAITSEL GRQRDEIELI ASENIVSAAV MQAQGSVMTN
61 KYAEGYPGRR YYGGCQYVDI AENLAIERAK QLFGCGFANV QPNSGSQANQ GVFQALIKPG
121 DTILGMSLDA GGHLTHGAAP NQSGKWFNAV QYGVRQQDNL LDYDQVEALA KEHRPKLIIA
181 GGSAIPRQID FARMREIADM VGAYLHVDMA HFAGLVAAGE HPSPFPHAHV ATTTTHKTLR
241 GPRGGMILTN DEDIAKKVNS AIFPGIQGGP LMHVIAAKAV AFGEALRPEF KTYIQQVIAN
301 AQALSDQLIK GGLDTVTHGT DTHVVLVDLR PKGVKGNATE KALGRAHITC NKNGVPFDPE
361 KPTVTSGIRL GSPAGTTRGF AETEFRQIAD WIIEVVDGLA ANGEDANEAV EDKVKAQVAA
421 LCAKFPIYPN L
SEQDB ID: 3101377EWR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRARLPHVLA EFVMFVLKQG WAALFGASLL IGLIVSDRIW QPDWALARYD ALLIYALGLQ
61 VLFLALGLES WREVRVILLF HLTGTAMEIF KVQAGSWAYP GPGLIKLWEV PLFSGFMYAS
121 VGSYMARAIR LFDMRFAPYP PFWLSVLLAV AIYVNFFAHH FLTDVRLILF AATVALYART
181 RITFRIGDHR YWMPLPLAAF FSSFFLWLAE NVGTATRTWL YTGQVAGEMV RLAKMGSWYL
241 LLYVSFVTVT LVMRDALEEA PAKGRSRPI
SEQDB ID: 3101377EWT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDRVQHAAL IACRARRRQP PAAPLSLSVA RDMVPAGGDD AMTESDRIED QIAATVALLR
61 ARLGVHGKSL RLALRRAKHR LPRRIYRRAM ELARVEPMMA HPRLRMTLNA PSLSAAAREV
121 QAHLRGIDLA DRRKGWWLGM LGALVFNLLV FGALLLAFLA WRRLI
SEQDB ID: 3101377EWU
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNTILHGTP TDAPPLVIAH GLYGSGRNWG VIARRLADER QVIAVDMRNH GHSPWAEPHD
61 YPALAADLAD VIEAHGGRAD LLGHSMGGKA AMVLALTHGQ LLRRLVVADI APVTYSHSQM
121 PFIEAMRGVD LSRVERRSDA EEMLAAQGVE KALQSFFTQS LDLPGKRWRL NLDGLAANMP
181 AIMSFPELSG HWDGAALFLT GSTSDYVRTE HRPLIRGLFP AARFAKIPGA GHWLHADRPR
241 EFEAAVRVFL NA
SEQDB ID: 3101377EWV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVGRAAKTGG PAMMRLASIL YSLISTALAG TAVIAVLTAG MVSLNAILVA AVAGFVVAAP
61 VSWMVARRLY DEEA
SEQDB ID: 3101377EWW
Reference:
3101377
Name: rhodanese-like domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVLTVKDMMA AANAVVPRID GARAQQLVAE GALLLDLRDA PELERAGRAS GAHHIPRGML
61 EFRADPDTPF HDPELRKDRV IVLHCASGGR AALAGKLLKD MGYGEVYNLG GFADWTGERI
121 EPVDPGM
SEQDB ID: 3101377EWX
Reference:
3101377
Name: monooxygenase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVKRKNVAVI GGGVSGLAAA KAFDERGHRV TGFERSHDFG GVWELSRSYP DVQTQSPKDL
61 YCYTDLPMPD AYPEWPKGPQ VHAYLHSYAN KHNLPRLFQL NTNILSMDRR ADGQPGWTLT
121 IEAAGRVRKE DFDFVAICTG QFSDKNILTH PGQEAFVAGG GEVIHSSEYT DSEMARGKHV
181 VVLGGSKSAT DIVVNAARSG AKSVTMVYRE NVWRVPYFVG GINFKRLLYM RAQEQQFNQW
241 GKSPLQRVIA ALLKPLVWAN FRGLETLLKA QLGLKKWNMV PDTPIEKEAS CSLPIVTPGL
301 FESFRDGTVK PIQGTYDRYE DGHVVLTTGD RVPCDLSVLA VGWKLGIPYL AQEYRDKLIE
361 ADGQYRVYRL AVNPDLPDMG FVGFNSSFCT ILSAEMIANW LVRFADGQLA HQPSAQEMNA
421 NIEMMLNWRR KERPAAQVYG GLCSAPFHFK HFDELLADMG AGVRKRANPL AEQFSYPDAR
481 AYGRFLASTP QYQAG
SEQDB ID: 3101377EWY
Reference:
3101377
Name: cupin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQMEAGITAT DAGLEGLAWN VVGQVYTPKL HSDNVFMWHA EVPADTFVPP HVHPTQDEWI
61 LVLSGTLEVD FGFETGNVTA NKAGPGDVVR MPKGVAHAVF NRSGAGATCV FGVAPSRKLF
121 DLFKALDGVT DPAELVRISA LHEVDFLPPP DAQ
SEQDB ID: 3101377EX
Reference:
3101377
Name: sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLVNKLAEE RRARLAAERL LELKQAELSA ANRKLGRHAL ALTKQIGEKQ AEVATVRDEN
61 EKVKSDLTVA NAKIEVAERR LWHSIQTIQD GFAFFDSDSK LIGANTAYLN VFDGLDEVAP
121 GISYMRILQL MTEEGIIDTG ELAAEEWRQM MHERWISPTP EPVVIRMWND QYVKMIDQRG
181 HGGDVVSLAL NITSTVRYEA ELRAAREKAE AANRAKSAFL ANMSHEIRTP MNGVVGMAEL
241 LCDTALDEEQ QLYASTIKNS GEALLVIIND VLDYSKIEAE KMMLHPEPFD LERCIHEVAM
301 LMQPIVRDKG LTLLVDYDLF LPTLFVGDPG RVRQVLTNLL GNAVKFTTKG HILIRVTGVP
361 DPATGRCAIH VAIEDTGIGI PREKLAHIFG EFNQVENERN RQFDGTGLGL AISQRLIQMM
421 GGTVWVESEE GRGSCFGFRV TLPMSEEAQP VLPNLPGRLQ HVLIVDDLAV NRAILEKQLA
481 QLGVRVTCCA SGAQALEKMS DCVDLVLSDH NMPEMDGLEL AEALRGAGWS DLPIFLLSSN
541 PGMAHADPAK RHVQGILQKP IPRAELFARL SDMRTEITSV QDPAAVSAPV TKPAQDAPGE
601 PTERRQMRVL AAEDNRTNQL VFRKMVKTLD IDLRFANNGL EAVEIWQDFQ PDLIFMDISM
661 PKMDGKQATG EIRRLEAGTG RHVPIVALTA HAMAGDAEGI LAAGLDQYLT KPLRKALIHQ
721 HIAEACPAGA LPVEPESGE
SEQDB ID: 3101377EXA
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQELLCDRGK GRHADPMQNK PDTPPLSRFH QFRTADLDEA RALVARNFCG HRLERQARED
61 AFDACQNRAG GNGLFYNYIR YGADVEIEPG ELGSFYLIQV PIRGQALIRN GRTEVETGSA
121 IASVLNPDRH TRMRWLAGCE QVLLQIDRNR LTAVAETLTG TALQSPVRFD PQIDRARPEM
181 QRWLALFRRA VSAVDHGALL DPDQALSRAL VEDELIAGFL RAQPSSIAPL LERPETGPLS
241 PHVRRARDFM QAHLADPLTL SQIAAAAGTS PRNLQLGFSQ LLEMTPLAYL RVLRLNYARY
301 LLRESPPQVT IASIAGAAGF SHLGRFSAQY AARFGEGPSQ TRKQHYLI
SEQDB ID: 3101377EXB
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGITRIHTGE RMSKIVKHNG VAYLCGQVGS GDSVAEQTRD CLARVDALLA EAGSDNTRIL
61 QAIVWLADMA DFAEMNAVWD AWVPAGHAPA RACGEAKLAR DTLKVEIIVT AACD
SEQDB ID: 3101377EXC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKQDIRVAL TIVALVLGLG WAIGYGIGLM TRPASVVPEN PPHDALKSPA RKAPRSGAVS
61 GDTRYPDYEE LYVNDYADLL DPAAEDRLRD KLIALYGHNG VEMTVLTIDT MGTYGHGGAI
121 EPFATGLFNN WGIGDAERND GVLVLIVRFD RKMRIEIGAG YERAWDARMQ RVIDAGFLPY
181 FRRDEYQEGI EAGVDETIRE LTGAYPGAWD MGTAQRGWSW LARAVDRIGE WVLSLLLVPL
241 GGAALWVRRY LRNRTRPCAQ CRTPMLRAGE EADDEHLDGG QRLEEYLKSV DYDVWHCPDC
301 GHIDIHRYKS WFSGYGACPQ CNYRTLSTTS TVLSAATKTR EGRKRVEYDC AHCGHHDSEI
361 RTIPKISDSN SGGSGRSSFG GGSSSGGGAS GSW
SEQDB ID: 3101377EXD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGWRAVAIHG VRVPFGRMSV MRAFLGIAAL CVAGAVEAGT VSGSAGYRER FALPPGAVLQ
61 VELRDISRQD VAAPLLSARR YAMTGVPMDF ALDYDDALID PAMRYAVSAR ILQDERLLFV
121 TDTVVPVLTG EAGNTADLML VRVAGEVSAL EGRNWALREI EGMPVERPGM PGIAFDAGGR
181 FSGRGGCNRF QGEAEIGAGW INFPDNIGMT MMACSQEAEA LDRRFLEALA KVVAFAVEGD
241 ALTLAGVEGR VVLRFVDQP
SEQDB ID: 3101377EXE
Reference:
3101377
Name: trkA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFLHLTDTA GALVTLAIVL TMFLLFLRES YPTEVVAILG VSAMLVTGVL PYDAALPVLA
61 NPAPWTIAAM FIIMGALVRT GALDAFTSIA QRHAQTNARF AIGLLMAFVV IASAFVSNTP
121 VVVVMIPVFV QIARTLNVAA SKLLIPLSYA AILGGTLTLI GTSTNLLVDG VARAQGMAAF
181 SIFEVTPLGI AVVAWGMIYL RFVAPRFLPE RDSMATLLSD RSKMKFFTEA VIPPDSNLIG
241 REVTGVQLFK RPGVRLIDVI RGDLSLRRNL KGVELQVGDR VVLRTQMTEL LSLQRNKELK
301 RVDQVSAVET ATVEVLITPG CRMVGRSLGE MRLRRRYGVY VLAVHRRNQN IGRQLDQLVV
361 KVGDTLLLEG APGDIQRLAA DMEMVDVSHP SVRAYRRGHA PIAVVALVGI VALAGLGVAP
421 ILLLSVLAVA LVLGSRCIDA DEAFSFVDGR LLALIFAMLA IGAALESSGA VRLIVEAIAP
481 GLSSLPPFLV IWAIYLLTSV LTELVSNNAV AVVVTPIAIG LAQAMGIDPR PLVVAVMIAA
541 SASFATPIGY QTNMLVYGPG GYKFTDFMRV GIPLNLTMGV LVSALIPLIW PL
SEQDB ID: 3101377EXF
Reference:
3101377
Name: Ser/Thr protein phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKILFLGDVM GRAGRQAVCE HLPRLRAEWK LDFVVVNGEN ASNGMGLSGE HAKALLDAGA
61 DCLTLGDHAF DQKDMLQYIE TEPRIIRPIN YAKGAPGRGH RLFTAPGGRK VLVAQVLGQV
121 FMKRPYDDPF SAIEPVLKSH PRGGLADAVI VDMHCEATSE KMAMGHYCDG RASLVVGTHT
181 HVPTADAMVM PGGTAYLSDA GMCGDYHSVI GMEKAEPMRR FITGMAKSRF TPALGEATVS
241 GVYVETAPQG GAATRIAMVR VGGQLQQSGP
SEQDB ID: 3101377EXG
Reference:
3101377
Name: 5-formyltetrahydrofolate cyclo-ligase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDDLTAIKAA ARKAAFARRK AAFDACPAGA AGRLSEVLAG YRGVPLSGYM PIRTEIDPLP
61 AMAEAAAHGP VGVPVIQGAG LPLRFSLWSP EGPLREGPFG AMVPETDDWM EPEILIVPLV
121 AFDSRGGRLG YGGGFYDRTL QGLRAKRATL AIGFAFDAQE AEALPLEPTD QPLDMVVTES
181 RVLSF
SEQDB ID: 3101377EXH
Reference:
3101377
Name: Mg transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mgtE
Sequence:
1 MTTGTVTPDQ DKPRDEDAYE LDRRHVAAIL YAVDTDDRDQ LIELMEPLHA ADIADLLEQI
61 NTFDRARLIR LYDREFDGEI LSELDEGIRE EVVRLLNPDV LAEAVRELDS DDVVDLLEDL
121 EESDHETILD ALEDADRVAV EQALAYPEGS AGRLMQREVV MAPEHWTVGE VIDFMRGSDD
181 LPDQFYHVVL VDPRLHPVGN VTLGRIMSAR REVPLSTLAE ETFQIIPADQ DEEDVAYAFN
241 QYHLISAPVV DAEGRLVGVI TIDDAMIVLD EEHEEDILRL AGVGESSLSD TVMETTRQRL
301 PWLAVNLATA ILASLVISIF ESTIANVVAL AVLMPIVASM GGNAGTQSLT VAVRALATRD
361 LTGSNLGRVL RREVMVGLVN GAVFAVVMGI VGHVWFGLPL LGPVIAAAMV VNLVVAGLAG
421 AGIPVLLEKA GIDPALASGT FVTTVTDVVG FFAFLGLASV FLL
SEQDB ID: 3101377EXJ
Reference:
3101377
Name: guanine deaminase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGQTILRGR VLSFVQSPFD TAPETAVREN EALLIEGGHV TAVGSWDALR REAPQAEVSD
61 HGERVILAGF VDAHVHYPQT AMIASWGKRL IDWLNTYTFP EERKFADLTY ASEIAARYLD
121 LTAAHGTTTM CSFCTIHPES VEAFFAEAQA RGQRVVAGKT CMDRNAPDFL RDTAQSAYDQ
181 SKALLQKWHG VDRISYAITP RFSPTSTSEQ LDAMGALWAE HPDCLMQTHL SEQTDEIEWV
241 KGLYPEARDY LDTYEQHGLL GGCGLYGHAI HLEKRERDRL REHGAGLIHC PTSNTFIGSG
301 LFDMAGLMAE GQRIGLATDT GGGSSFSMLR TMAAAYEIGQ LRGVPLHAAQ LLWLATQGSA
361 RALRMDHQIG NIAPGMEADL VVLDLASTPA IAQRSAMADD LWEALFPTIM MGDDRAIAEV
421 WIAGRRV
SEQDB ID: 3101377EXK
Reference:
3101377
Name: hydroxydechloroatrazine ethylaminohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEHLIRNAD TILTMDAGRR ELAGADILIR DGIVAAIGPN LATLGEVHEA RGCVVTPGLV
61 NTHHHLYQSL TRAVPGGQDA LLFGWLKTLY PIWARFGPEE MFVSAQTGLA ELALSGCTLS
121 SDHLYLYPNG ARLDDTIAAA TELGLRFHPT RGAMSIGESA GGLPPDTLVE GEAAILDDMI
181 RVVDAFHDAG EGSMCRVGLA PCSPFSVSRD LMRDAALLAR DKGVMLHTHL AENDEDIAYS
241 LAQFGCRPGQ YAEDLGWTGP DVWHAHCVKL DGQEIDLFAR SRTGVAHCPC SNCRLGSGIA
301 PVRAMRDAGV SVGLGVDGSA SNDSGNLMGE ARQAMLLQRV ARGADAMSAR EALEIATRGG
361 ADVLGRPDCG RLELGKRADI AIWDVSGINS AGSWDPAALL LAGPTRVKHL FVEGRQIVRD
421 GQIITIDLPH MIERQNRLAR ALMG
SEQDB ID: 3101377EXL
Reference:
3101377
Name: inositol monophosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPADFTDLE IAEKLADAAR AAILPYFRRL DLGAENKLDT GFDPVTEADR AAELAMRDIL
61 ADLRPDDGIH GEEFDEVEGR SGRVWVLDPI DGTRGFISGT PTWGVLIALS DMRGPFLGVV
121 DQPYIGERFV GTPEGAYVTG PLGRQTLATR QGTDLSDAVL FTTFPELGST AEEAAFRAVS
181 SRVKLTRYGM DCYAYALLAA GLVDLVIEAG LKAVDIQAPI ALIEAAGGIV TDWQGGPAHE
241 GGRALAAANP QLHSAALDFL RGV
SEQDB ID: 3101377EXM
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHPVDVHVG KRVRHRRWLI GMTQQQLAEQ VGIKFQQIQK YETGANRVSA SRLWDIAEAL
61 DVPVSFFFEG LEEAEKVVAE KPSVPADLMG DKEALDLVRS YYAIPENQRR RLFELARVLS
121 DVA
SEQDB ID: 3101377EXN
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSFTVQSAG SPAQLIDQPV PEPAPGQVRI DIRACGLNFA DLLMQKGTYQ DTPPAPFTLG
61 MEVAGTINAL GTGVSHLKVG DRIAIYTGQG GLAEQGVFDA DRALPLPDTM SFEHAAAFQI
121 AYGTSHMALD HRARLQPGET LLVTGAAGGV GLTAVEIGKL MGARVIAQAR GADKLEIARQ
181 AGADILIDAD EDLRARLLDL GGVDVVYDAI GGDVFKAAFR AANPEARLLP IGFAGGEVPQ
241 IPANHLLVRN LTVIGFYIGG YLSFRPEVIR NSFQTLLDWY QQGRLHPHVS HILPLERAAE
301 GLELLRNRTA TGKVVITP
SEQDB ID: 3101377EXP
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRNLDITTL RSFVAVADSG GVTRAAGFLH LTQSAVSMQI KRLEELLGLQ LLDRSGRGIA
61 LTASGEQLLA YARRMVAMND EVIARLTDQA FEGEVVLGVP HDIVYPAIPR VLQQFNAAYP
121 RVRVQLLSCY TSWLKEQYER GECDVILTTE PGGGDHCETI AELPLRWIGA AGGSAWRQRP
181 LKLALGRRCL FRASVIAALD AANIPWELSV ETENDRTIEA TVSADLAVHA MLEGTAAPHL
241 MQIDSDTLPE LPSHKINLYG GNDGKGQIVD ALVDLVRQNF AKMGGAHLRA VS
SEQDB ID: 3101377EXQ
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPRYTSRMK KGHDMSFVTV SHPCRPVRRT RLSAFYDLLA LRRQRQELRH LDDRALDDMG
61 ITRAEARTEA NRPFWDAPHH WLK
SEQDB ID: 3101377EXR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPEFDFRET QMAQFDTIRS AAGSRAAQID EGLRAHMNKV YGTMSVGMLI TFAAAWAISG
61 LAVTTDPGAA VAQLSADKYL TQIGYSLYAS PLKWVIIFAP LAFVFGFSAA INRLSAAAAQ
121 LIFYTFAFVM GLSISSIFLV FTGQSIIQVF LITAIAFAGL SLYGYTTKKD LSAMGTFLIM
181 GLIGLIVAMV VNIFLASSAM AFAISAIGVL IFAGLTAYDT QNIKNTYLQM AHSGDQEWLG
241 KAAIMGALSL YLDFINLFMF LLQLLGNRE
SEQDB ID: 3101377EXT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLDNRTGPP HRGGLFHSGV WRRARTACFR CPGGARVARS ATNPMTVMKK ILLPTLALMS
61 LSACASLWHR EGVGFTGIDG EPKTFTTEKG SADYVARRLS VPAELAGKPV QRLQSEKGDI
121 ASLAGVAIGA GGRDPQSAVE VGSGTLELFL STVEVNGVLF AVLRTQEGEI DRLPENSNVA
181 FAQSVPRLTG CLTGGQVYQA GRANRPTGLA VPLDCR
SEQDB ID: 3101377EXU
Reference:
3101377
Name: ribosomal protein L33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmG
Sequence:
1 MAKPTTIKIR LNSTAGTGHF YVTKKNARTM TEKMTVRKYD PVVRKHVEYK EGKIK
SEQDB ID: 3101377EXV
Reference:
3101377
Name: MurNAc-Ala amidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPHWHPSPN FGPRRDGLTP SLVVLHYTAM DSAKAALERL CDPEAEVSAH YLIGADGTLW
61 QMVDEADRAW HAGVGEWRGR DDINSRSIGI ELDNRGDHPF SAPQMTTLDG LLADILRRWA
121 IPPAGVIGHS DMAPGRKCDP GPRFDWARLA RLGLAERSGS GSCEDDPTPE RLRAAAHATG
181 FTAPADDETL LAALRLRYRP WGRGPLCAAD LAALPLHSAQ NTPG
SEQDB ID: 3101377EXW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRGRSAEYG LCAGTGRGLC GQALKMVVNL SAKQKSRTAT MRVFYLVPVI GVLAACDPAI
61 PDSAAGVGFN TPEYQAQREA VLQGQTVTGD PLIPPSAVSS EGLPPLDPST AAPTATAPLQ
121 APTQTAAYVP QPGDTSDDIA RETAAALAAA NGNSGVAPVE ASPSNPAPAL VSNPGISDEQ
181 DFQAVASRES IQSDAERIAQ NRASYQVVAP TALPQRDTDG SPNVVQYALS TSHPKGTQIY
241 SRAGFNLAAK AQRNCAAFAS PDQAQIEFLS NGGPQRDRKG LDPDGDGYAC GWDPAPFRRA
301 VQN
SEQDB ID: 3101377EXX
Reference:
3101377
Name: Glu-tRNA(Gln) amidotransferase, Subunit: A, Class: EC6.3.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gatA
Sequence:
1 MSDLNTLTLA QARDALRKGE TTSVALTEAC LAAIEGAGAL NAFVHKTPEL ALERAKAADE
61 RLQGREEAPK MCGLPIGIKD LFCTKGVPSQ AASRILEGFK PEYESTVSQQ LADAGAVMLG
121 KLNMDEFAMG SSNETSCYGN AVNPWRRGND DAALTPGGSS GGSAAAVAAD LCLAATGTDT
181 GGSIRQPAAF VGITGIKPTY GRCSRWGIVA FASSLDQAGP MTKDVRDAAI MLEAMCGHDP
241 KDSTSAELAV PDFEAMLTGD IRGKVIGIPR EYRMDGMPEE IEALWQQGTE MLRAAGAEIR
301 DISLPHTKYA LPTYYVIAPA EASSNLARYD GVRYGHRAKL AQGDGITEMY EKTRAEGFGH
361 EVQRRVMVGT YVLSAGFYDA YYNRARKVRS LIKKDFEDVF AAGVDAILTP ATPSAAFGLG
421 EMTDADPVQM YLNDVFTVTV NLAGLPGVSV PAGLDKQGLP LGLQLIGRPW EEGDLLNTAY
481 ALEQAAGFVA KPSKWW
SEQDB ID: 3101377EXY
Reference:
3101377
Name: Glu-tRNA(Gln) amidotransferase, Subunit: C, Class: EC6.3.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gatC
Sequence:
1 MSIDQSTAAK VAKLARIKVE QDALPALAAE FNTILGFIEQ LNEVNVDGVE PMVSVTPMRL
61 KRRTDGVSDG NQQAKVLSNA PDAREGFFAV PKVVE
SEQDB ID: 3101377EY
Reference:
3101377
Name: PAN domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRFGFLAIL SLQLAFFGVS GLSAQEAAPG FRYLATRDMD FYGEDLDALF DTDLQSCIRA
61 CSANNACNAF TFNARSNACF PKRGVSEQTP YQGALSAVKL PSPAAVRDRA RQQAARLAFL
121 PDRDLTRAVA QARDLGLRYA AGGMELDQVI AAMRNAGEGA QAAGWAGLAV SLSDRADLWA
181 EYARLLLSVR SDDSSIKRDH ARRAVSAAIN AYLRADRPGA EVSALALLAQ ALERDGRGRD
241 MVPVLRLASD IQPREDVLAA LDRAIGKYGF RVVETTVESD SAQPRICAQF SDPLARSGVD
301 YEPFVHSPEG DLVVQADGNQ LCLDGVEHGK RYRITLRAGL PAGSGEALWK DVTLTHYVRD
361 RSPAVRFPGR SYVLPKSADA AIPVETVNAT TLDLILRRVS DRNLLRAVQE GYFARPLSYW
421 EDEHFASDIA QEVWTGSAEV ASTLNRDMTT RLPLAEAISG QAAGIYTLTA RVPGADPYDN
481 PGATQWFVLS DLGLSSISGN DGLHVSVRGL SDAAPRAAVD LTLISRANAV LGRVQTDAQG
541 LARFEPGLTR GTGAAAPALI LATAGDTDLG FLSLIDPAFD LSDRGVEGRK PAGPVDVFLT
601 TDRGAYRAGE TIHATALSRD GTARAIDGLP LTAILTRPDG VEYGRKVSDG GVAGGHVFAL
661 TTGASAPRGT WRLDIKADPD GPALASQTLL VEDFLPERID FDLALPDAPI LPGDSPPLSI
721 EARYLFGAPG ADLSIEGQVQ LRAADQIAGW PGYRFGRHDA GLQTRTSHFG DARTDAAGNA
781 RLAVEIPQID AEGKPLEAVV TARLADGAAR PVERRISVPV SPATPVIGIK PLFEDVVSEG
841 TEAGFQVIGL TPDLTPQPMR IKWTLNRVET RYQWYQLYGN WNWEPVTRRT RIATGEADLG
901 SDPLSLSQPV EWGEYELLVE RLDGAYVASS ADFYAGWYQA ADAAATPDRL ELSLDKDSYR
961 PGDTARLRIV PRMAGTALVT VLSDRVIARQ AVEVAAGESV IPLTVTEDWG TGAYVTATVI
1021 RPMDVAAGQN PARALGLAHA TIEPVGKALT VAIDAPEVAK PRATQPVRLT VAGAQAGDEV
1081 WLTLAAVDLG ILNLTGFQSP DPQGHYFGQR RLGVEMRDVY GRLIDGMNGA MGIVRSGGDA
1141 DNGLRMQSPP PTQDLMAVFS GPVQVGADGG VSVDVPLPAF NGTVRLMAVA WSDQAVGQAE
1201 RDMIVRDPVV VTATVPRFLA PGDSSRLRLE VVHADGPPGE MALKLASAPG LQLGAAPDRF
1261 TLTEGGKAVF EVPVTATALG DPVLTVELET PGGQELRQVL RLPVRANDPV VAQTRRFALG
1321 AGDSFLFSRD VFTGLRPGSA RAILSAGPLA RFDAPGLLGV LDRYPYGCTE QVTSQAMPLL
1381 YLGAVAQAAG LGTGPQVAER IDAAIRRILT RQSANGAFGL WRAESGDFWL DAYASDFLSR
1441 ARAEGYALPD RAFAMAMDNL RNRLNYAPDF DEGGEDIAYA LMVLAREGAA AMGDLRYYAD
1501 VKADAFTTPL GAAQLGSALA MYGDQTRADA MFARAARMVA GQRPEAPVWR ADYGTSLRDA
1561 AGLLTLAAEA GSAVIDRDSL ISRISQPAGE MSTQEAAWSL LAAQALVKQP EQSGLRVNGA
1621 AVDGPFVQVL AGTSDEVLNI TAVDGGATDI TLTMLGVPEV PLPAGGTGYT ITRARYTMDG
1681 APIQRDAFAI GERFVTVLTV TPFEASGGRL MVNDPLPAGF EIDNPSLLRS GDVRALDWLS
1741 LDEASHTEFR SDRFLAAVDL YGTRPVTLAY VTRAVSPGAF HHPAASVEDM YRPRYRARTD
1801 TGRIRVGQ
SEQDB ID: 3101377EYA
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVVMSDGAR RAGIAGAIAC TTIFALTVGL SFPLLSLVLE HQGISEAAIG INAAMTPLGI
61 VLASPFYPRL IERFGSWQVA IGSLLLSALL ILSMGLTRSF GAFLVLRLML GMADVGIFIV
121 SETWINQLAR PETRGRVVGI YATALSVGFG AGPFTLALIG FQGFAPFAVG AVCCFLAIGV
181 VLAVRAYAPD VSGETPVSPL GFLRRAPTLL AAICVYAFWE GAMLSLFPVF GLAAGLTVAV
241 ATSALSVAFL GNTALQVPIG WLSDRTSRRQ VMVLCALLTA LGAVLLPGLP DRLPLFLGVL
301 FVFGATAGGI YTMAMSELGD RFTGSDLVAG NAAFAIAFGV GGMLGGPITG AAMQFMGNGG
361 FAGGVALIFV AMAALAHLRR RRG
SEQDB ID: 3101377EYB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRMITFTAA ALSTLLAFGP AMAADEINVV PGLTAAGAPL GLHGSDPVAL LDKGKNREGS
61 AAHTAVHDGV AYYFASEKNL KAFQANPDHY SVQNGGFCTF GVSVGKKFDG DPNYAAVVDG
121 KLYVFLNEEI YKMFEKDKAG TISKAAANWT KIEHTAAKDL
SEQDB ID: 3101377EYC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGDLTADVLV IGGGTAGFGA AVAAGRLGLD VVLLEAGTKV GGVMAFCPGM PWGAAYPQDE
61 SIGGLMQELT DRLMGMDPPM AEKRPCTLEN FGPEIQYDHD AATTMMFEML EEAGVRVFLG
121 AVAFAPVMEG NRIAAVEFFD RRCPQRIAAK IVIDCSGDGD ISAKAGVPFT LGDGQGNMMA
181 VTLSFFMEGA DWDRVFAEND PYFRRYAAKG IAEGRLHPHL AQLYLMKGFH PGTVFCNSVA
241 IRGVDGTDPA DVTRATQEGR RRCLQLAQFL RADVPGFEAA HMSQLGPTVG VRETRKLEGM
301 YKVTGADLAA GTKFADGIVA CDNPIDDVMR TSDQMTHDAM VERGGYYTIP FRSLLPKAVA
361 NLMFAGRILS ADLVAFASVR GMPQCMAMGQ ATGTAAHLAI RDGAPVQQVD RAELVKLLSE
421 QGVSRLLS
SEQDB ID: 3101377EYD
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWLREIDGY CERLGPGYWA EPVNAVTNLA FVLAAAVMWR RTRGLRDRTE TALIAVLALI
61 GLGSFLFHTH AQVWAAIADV LPIAAFVLIY IHAINRAGWR LRPLPALLLT GGFFPYAAAT
121 VPLFGLVPEL GGSAAYAPIP LLILIYAALL NRRAPALARG LALGAGILIV SITFRALDSP
181 LCNSWPIGTH FLWHLLNALM LGWMIEVYHR HRSGL
SEQDB ID: 3101377EYE
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIIWLGHGS FRIESGEAVL LVDPWLNGNP TLPEDQHDAA VIGATHILLT HTHFDHVVDV
61 LPLARLLKVP VVGQYDLMGY WSEAEEIETV GFNKGGTVTL NGVRVSMVPA SHSSTFTTPD
121 GLRSGGSEVG YMIAAEGHVV YLSGDTGIMA DMDWMGDYYK PDIGILSAGG HFTMDMQGAA
181 YAAKRYFNFK TVIPCHYRSF PILEQSAQAL IDGLPGVEVI EPQVMQAIEV
SEQDB ID: 3101377EYF
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGETWMSAVT PSPELLAFAR RWIDAIPNRR PNDLRNMMTE KEHLLFVGTG EDEIWAGSSV
61 REGIGDFFGE IPEFLRHEEV FAEAYEHNGT GWACLCHEIV FARQPDRVFQ VRSTLIFTLE
121 DGAWKIVHRH GSVPIPNMDF TGAAQTAIAD LVAAAKQGFS LDQREGFASV MFTDIVNSSR
181 LASAMGDRLW SSEVARHFNS LREIIEARGG QFVKSLGDGT MSSFPSPEQG LRAAQAILRA
241 TEASDGPAIA LRIGIHTGEV IQTREDFFGT VVNKAARIAA VAAPGEIVIS GDTRDLAGAV
301 EGLIIHPPAD ISLKGFDGLH RVHRLEWKA
SEQDB ID: 3101377EYG
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIQRSPEIEA IVRRWTTLIR SHKVADLPHY LSQSDALVYI GTADGELWRG QLVRDGIADH
61 LAEVPDFIEE DIEIEAYEHG ETGWATYQSH YTFPGTGSQG THRVTFVFVL ERGSWKMVQH
121 HISQADSNRD KLGIEHTAFQ RLIAAAEAGS HSFATGGLAT IMFTDIVDSS AQAAAMGDTD
181 WVRLLDAHFR RIETIVTDHG GTLVKSLGDG TMSSFQSATG ALRAARAIRA ATGSPDAALA
241 LRIGLHTGEV VENRGDFFGT VVNKAARIAA AAGPGEILIS EALHLIAGGA PGDALAEPVS
301 LFLKGFEGEH AVFRLAVDE
SEQDB ID: 3101377EYH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSWLSRHAAS IEALAAMATA ALALAALIGI KIQLDEADRL QRQQSAREAF RAHLALAATL
61 PEFAAPADEC ALLHSNRGGA YAAFVDHLLY SAEQMLSVSE GWETSFLALF EPHRTYLCSE
121 DAQGGETEET AALMARFRAS ACAEVPACH
SEQDB ID: 3101377EYJ
Reference:
3101377
Name: peptidyl-Arg deiminase family protein, Isotype: porphyromonas-type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGQASAGEA GFHVPPEEAR HDRTFMQWPV NRRVHPDPVF LDMAQQTIAD IANAIAEFEP
61 VTLLAAAEDH ARARRKLSDK VTLWDIPTED LWCRDAGPLF ARDGRGGLAV SHIQFNGWGR
121 KQVHRRDARV AEQVAQRLGL PLLPAGLRGE AGGVEQDGHG LLMAHESSWV NDNRNPGLSR
181 AEIEARLLRA YGAQRMIWSP GVWGEDITDY HIDSLARFTG PGRVLINLPD DPDMDDPFHL
241 AALDTHDALV AAGLMVEVIP EPHRRRVKSV DFVASYANYY VCNGAVIAAQ FGDAETDRIA
301 ARALARHYPG REIVTLNVDP LGEMGGGIHC ATQQMPAT
SEQDB ID: 3101377EYK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVVQVFLDA VAIRFYRGIG AELQSIGPFS AINFFVGANN AGKSIVLNFI HDRLPFCEGK
61 SQRLEPNSPE VHRGSGEEGE FVAAVGVPKE RFLEAVWERF PQAQMHVHEF KGKVSAIFDE
121 LSVGECVWFR SGPQIGDREY HPQPDIEALS KLFPDREWNA LWRSVQSSSG GGLINHWIPQ
181 SLDILNRCSV LSFPTTQKIE AKRGIGRADE AFNGRGDGLI FELARLQEPG FNEDEKRDLF
241 EQINAFLQEA TGKPGARIRI PHDQSQVLVE MDGKVLPLDS LGTGIHEVVL IASFCTIHQD
301 QIICMEEPEI HLHPLLQRKL VEYLRDHTDN QYFIATHSGA FIDTPGAAIF HVENDGQQTL
361 VRPALVRQDK WRLLDDLGLH ASDLLQANMV IWVEGPSDRI YLNHWIAAVD PDLREGIHYS
421 ILFYGGGLVS HLAAGAEEDG IQDLIDLRRM NRNMAIVMDS DRAGPRARLK GTPERIKREL
481 TDDWGMVWVT RGREIENYVD HAALQAALKT LHPRIYDRPA EGGAFDHAFY FLRRDGEVHQ
541 AANKVGAARL VCEGAAKLDI LDLQDRLSEL SGRIRMANGL PARATG
SEQDB ID: 3101377EYL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEFRFREGEE VVDLPDGTDA GVYFIGRIRT PWSDRKDCPR QGREDGPKCR IELDARWASA
61 LHGVADYTWL DVLYWLDKGR RDLVIQNPKS DGKLFGTFAL RSPQRPNPIG LSRVRLERVE
121 GTTLVVRGLD CLDGTPLIDI KPNRCEFTPK APPKPGV
SEQDB ID: 3101377EYM
Reference:
3101377
Name: cytidine/deoxycytidylate deaminase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVFRSHMDQA LAEARAAGAR GEVPVGAVIV APDGRVVAAA GNRTRETCDP TAHAEIVALR
61 AACAAAGSER LVGHDLYVTL EPCAMCAAAL AAARIRRVYY GAADPKSGGV AHGARVFSHP
121 QAHHAPEVYD GIGGEAAAEL LRGFFAERRD TGNRNGGES
SEQDB ID: 3101377EYN
Reference:
3101377
Name: RNA pseudouridylate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNTPPPGER IAKILSRAGV ASRREAERMI EAGRVAVNGK VIDSPALNVT ERDRVTVDGA
61 PLADAEPARL WLYHKPSGLV TTARDEKGRK TIFDDLPEDM PRVMSVGRLD LNSEGLLLLT
121 NDGAVKRQLE LPSTGWLRRY RVRIKGTPKD EDFAPLRQGL VIEGERFQPM IVSIDRQQGA
181 NAWLTVGLRE GKNREIRRAI EDIGFIVNRL IRISYGPFQL GTLAPGKVEE VRRRVLRDQL
241 GLDGEDQPTD ERPARPERKR KPGASAPATP RGGTTAKARP GGAAAGRSDA ASKPRSGAPA
301 KSRSGDPAKQ RSGAPPRTRS GDPVKARTDG PARARADGPG KPRGSGPRAG GPAKPGTGRR
361 NAAPGERPAA KPGDKPSRRP GGGKPRS
SEQDB ID: 3101377EYP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARRYGGKFS PETEQQSEPA PRGQFDGARV DPAGARANAM FVPAIPLVFT SLNDGAIGLV
61 LGLGAAGLWT GAALLLREGL RAEAAYHARR VARRPAIPRK LFATALTGLG TALAVYKSGM
121 MAGDASILAG ILFGIAASAL HLLAFGADPM RDKGMEGVDT FQQDRVARAV GEAENMLGEM
181 SDAIRRAGDR QLDARVERFQ TTARELFRTV EEDPRDLTGA RKYLTVYLRG ARDATVKFAD
241 IHARTRDGGA RADYLALLDD LEQNFAARTR KMLLDDRSDL TVEIDVLRDR LQREGVRLD
SEQDB ID: 3101377EYQ
Reference:
3101377
Name: tellurite resistance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDSIQKKAA EAVGLVEEVT AVILPEPRAE VVPLAEADAP ASAEIRRRMG EIDMGDTNSI
61 VRFGSGAQAE LQEISQAMLA DVRNKDVGPA GDSLRNIVTT IRGFSVSELD VRRERSWWER
121 LLGRAAPFAK FTARFEQVQG QIDKITDTLL GHEHTLLKDI KSLDLLYEKT LRFYDELALY
181 IAAGEEKLTE LDSQDIPALA AAVDAAPEGE QVIKAQELRD LRAARDDLER RVHDLKLTRQ
241 VTMQSLPSIR LVQENDKSLV TKINSTLVNT VPLWETQLAQ AVTIQRSAEA AAAVRDANDL
301 TNELLTSNAA NLRESNKLIR QEMERGVFDI EAVKKANADL IGTIQESLQI ADEGKAKRAA
361 AEEELKKMEA ELRDTLAAAR ARADGIGYNA GTAVPG
SEQDB ID: 3101377EYR
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTGRRIATA CAAAFAALAL LAGCDMPPKS SPVPPSRPAG LAPAGDQVTP RSAASADLAR
61 YYAAVQNDLL TRGLLRTDGG GPDTPYDAED LERNFINIAF YNEYDSGAGL PTGGRSQGFL
121 SRWPGSVRVG VEFGPSVPLE QRAKDKGAVE NYADRLGRLT GHQISAVSRG ANFHVFVAGL
181 DDGPFVQERL RRLVPGIRAE QLDLFVNLPR DIYCFVFAAA DPDRPYGYMR AVALIRAEHP
241 DLVRLSCVHE EMAQGLGLAN DSPAARPSIF NDDDEFALLT DQDEKLLSML YDPRLTPGTS
301 AEEARPVIRI IAREKLGLSL
SEQDB ID: 3101377EYT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGIFDFLSGQ FIDVIHWTDD TRDTMVWRFE REGHEIKYGA KLTVREGQSA VFVHEGQLAD
61 VFTPGLYMLE TNNMPILTTL NHWDHGFRSP FKSEIYFVNT TRFNNLKWGT KNPIMLRDPE
121 FGPTRIRAFG TYSVRVTDPA RFLSEIVGTD GEFTMDEISF QIRNIIVQEF SRVIAASGIP
181 VLDMAANTAD LGKLIAAQVA LPLTEYGLEM PEFYIENISL PPAVEAALDK RTSMGLAGDL
241 GKFTQYSAAE AMTAAATNPA GGGMAAGLGA GMGMAMAQQM AQPGPWGAAP ASRHAAPPPP
301 PVEHVWHVAV DGQTSGPFSK AKMGRMAAEG EITRDTYVWT PGQDGWKRAE DVRELAQLFT
361 ILPPPPPPPG A
SEQDB ID: 3101377EYU
Reference:
3101377
Name: cytochrome b562
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPARPAYSRL QIALHWLVAI LIAAAWLTHE GMGRALETRI ETGASGFEGN TPHVWLGIAV
61 FVAVLIRIVV RRVQGAPGPL PGATPLMEKA ATWGHRLLYL LMVLTPALGA LAWNAHSEAV
121 GELHETVGSA LMLVALGHAL VALWHQYVKK DGSLTRITRP QG
SEQDB ID: 3101377EYV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLPPPPPG AAPAPVQEHR FPCAQCGADY RFNPGAGTLV CDHCGHTEPM RADPWTGASL
61 RELDFEAAMA QDLPEAEIEE TRVLSCPNCA AQVEFDPDTH AAECPFCATP VVTDTGIHRH
121 IKPRGVLPFA LDERSAHKAM TDWLGRLWFA PNGLKDYARK GRRMQGIYVP YWTFDADTKS
181 SYRGERGTIY YETRTVVRDG KTVTEQVPKI RWSPKSGRVA RFFDDVLVLA SRSLPKSHTD
241 ALEPWDLAAL EPYRPEYLAG FRAEGYTVEL AEAHGEARAH MARVIERDVR FDIGGDQQRI
301 HAIDTKVSDV TFKHILLPVW LAAYKYRGTT YRFVVNGRTG RVQGERPWSA IKITIAVVLG
361 LLIAAGVGYV MALNQ
SEQDB ID: 3101377EYW
Reference:
3101377
Name: nitroreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRQEETCPM SLNQLEALLG ARHSCRAFRP DPVPRADIER IIAAACRVPS WCNAQPWQVT
61 LTSGAETDAF RTALMAEAMT GKPGPDLAFP TGYSGVYQER RRTCGWALYE AVGVEKGDRA
121 GSAAQMMKNF SLFDAPHCAI ISSPAELGGY GAMDCGGFVA AFTLAAQALG VATIPQAAVA
181 SYAPFLHRYF DIPKDRLILC AISFGYADTD HPANGFRTER AALDDIVDWR G
SEQDB ID: 3101377EYX
Reference:
3101377
Name: D-Tyr-tRNA(Tyr) deacylase, Class: EC3.1.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dtd
Sequence:
1 MRALIQRVSH ASVTVDGVVV GQTGPGLLVL VCAMAGDGEA QADQLAAKIA RLRIFKDEAG
61 KMNRSVLDIG GAALVVSQFT LAADTRSGNR PGFSSAAPPA EGERIYEYFA AQLAAQGVPV
121 ETGRFGADMK VELLNDGPVT IWMDI
SEQDB ID: 3101377EYY
Reference:
3101377
Name: MOFRL family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTAHDQALA IWQAGVDAVG GHAATGAALG NLPRPDRILA VGKAAASMAR AALDHFGPLP
61 CLVVTKDGHG AELPASVQLI EAAHPVPDAR SLVGGRALRQ AVEAMPEGSH LLLLVSGGAS
121 SLAEDLVTGK TLDDLAALNR AMLAEGLDIT AMNARRRQIS RIKGGGLLAG FKGARADVLA
181 ISDVPGDDLM VIGSGIGALP AAPAFAASAC IIASNSVARA AACDHARALE LPVLGNEEAL
241 HDDLAALAPR IGARLRAMPQ GVLVLGGEPT VILPPNPGRG GRNQALALAL AREIAGDPGL
301 VVVVGGTDGT DGPTDAAGAI VSGRTWGEGA AQALAAADSG SWLERAGALL VTGPTGTNVM
361 DLLVALRT
SEQDB ID: 3101377F
Reference:
3101377
Name: oxygen-independent coproporphyrinogen III oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADDWQHGGF GLYVHWPFCQ AKCPYCDFNS HVAREIDQKA WVRAYVSELE RCAAELPGRV
61 LNTIFFGGGT PSLMMPETVA AVIETVRRLW PTSNDMEITL EANPGSVEAG RFAAYRDGGV
121 NRISMGVQAL NDRDLHRLGR IHSVAEARAA FDIARRCFER VSFDLIYARQ DQTPEAWRAE
181 LNEALAMAVD HLSLYQLTIE DGTAFGDRYA RGKLRGLPAD DDAADMYLIT QEVCATHGLP
241 AYEVSNHARP GSESRHNLIY WRYGDYVGIG PGAHGRITVD GQRFATESPL NPGAWLGAVA
301 KGSGELSRVA LSLQDQADEY LMMGLRIAEG LDIHRYEALS PQPLNRNRLA HLTELGMIEI
361 EGTRLKATAQ GRAVLNAVIL DLMSE
SEQDB ID: 3101377FA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGREAVATA HWRRLDGEGS DRCTLSRVAQ GWIMVGHAHW RDEGCDTTLS YDIRCAPDWR
61 SLSADVAGER GGRPLSMRIE ATPMGWRMDD VLQPGTEDCS DLDLSFTPAT NLMPIRRLGA
121 FAGDELRVAA AWLMPDLDCV ARLDQIYTRL PDGRVHYASA GFAADLDLHG SGFTTLYPGL
181 WQGWVDDA
SEQDB ID: 3101377FAA
Reference:
3101377
Name: X-Pro dipeptidyl peptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMTQKNTLR EIEELEDLGI TLSDGTRLSA RVWRPLDAGT DPVPAILEYL PYRKRDGTCA
61 RDALSHPWMA KRGYACIRVD IRGNGDSQGL MEDEYTQQEL DDAVEVIHWL AAQPWCSGTI
121 GMMGISWGGF NSLQVAAMQP EPLKSIITLC STVDRYADDI HFKGGCLLNE NLGWGATMWC
181 FSSRAPDPAL VGDAWREMWL ERLRAQPFLP ETWLQHQTRD AFWQHGSICE DFSAVKTPTL
241 AISGWGDSYM NTVPHLVENL DTVVKGINGP WIHKYPHFAI PGPRIGFLQE ALRWWDRWLK
301 GVENGAEDDP DYRAYLMDGI APETKSLFRP GRWVAEAEGA TAHLPVTTLS LSDAGLGSDG
361 PLSARVCSPL HVGMDCGEYG SFWAGPELPG DQRLDDALSV CFDSAPLPQR TDIVGAPRLR
421 LRLRADKPQA QIAVRLNHVL PDGTSARITW GVLNLSHRDS HATPEALEPG RLYDIALDLD
481 HIAYRVPAGH RLRVAISSSY WPMIWPAPER ATLTLDSGAL DLPLRPSGEA DEWVFPPEDA
541 DPPWQIRTLR EGTNTRRTEI DKATGHVRLI IVDDAGLVED MAHGARSGTI AREEWVIHPD
601 DPTSARGSCH WTAETGRGDL SLRTETRCEM WSDAEHFHLK AAIEAYENDT KIYENVKTSR
661 IRRNML
SEQDB ID: 3101377FAB
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEGAKYANL DSSVNKNRAA KPRKHSTGEN SMNEQLEHMA GRVTAGKMTR REFMGKAAAL
61 GVSAAVASSI FAQAAQAAGP KKGGVVKIGS VGGESTNSLD PATYASQVPY HNGRQFGDTL
121 VEVASDGSIE HRLAESVEAS ADAKTWTFKL RQGVEFHNGK TMTSEDVLKT MQRHSNEDSK
181 SGALGIMKGI ESMKADGEYF SVTLTDANAD LPYLMADYHL IIQPDGGMDN PGAGIGTGPY
241 QVEVNEPGVR HAYKKFANYW GDDAHFDGVE VLVINDATAR TAALQSGQVH MINRVEPKVA
301 SLLDRAPNLT VQSTPGRGHY VFIMHVDKAP FDNKDLRLAL KYAINREEMV EKILRGYGSV
361 GNDMPINAAY PLFDSAIPQR EFDLAKAAEH YKASGHDGSP IILRTADGAF PGAVDAAALF
421 QQTAAQAGIP LEIKREPNDG YWSEVWNVQP FCASYWGGRP VQDQMYSTAY LSTADWNDTK
481 FKNADFDAML MAARSELDPA KRKEIYSKMG MLLRDEGGLI CPMFNDFVDA VSNTLSGWET
541 DPNGELMNGQ VTRKLWFS
SEQDB ID: 3101377FAC
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPVVKLVSQ RLALGLMLLF GASALIFGLT EALPGDAAQA VLGQSATPES LANLREEMGL
61 DRPALTRYFE WLGGILQGDL GKSLTNKLDI AESVGSRLGN TLFLAFWAAI VSVPMAIFLG
121 LLAVRYRNRW PDKVISAVTL TTISIPEFLI GYVLVYFVAV KLGMFSPLAM INESMSLGQK
181 LNAIALPVIV LTMVVLAHMM RMTRAAILNV MQSAYIETAE LKGLTNFKII YRHAFPNAIA
241 PIVNVVMLNL AYLVVGVVVV EVVFVYPGMG QYLVDHVTKR DVPVVLACGV IFAAIYIGLN
301 MVADIVAILA NPRLRHPK
SEQDB ID: 3101377FAD
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKNIPISAAI GLVLTALYFI GAIFAPLLAP YGMAEVVGDV WEPSSSEYLL GTDNIGRDLL
61 SRMIYGGRTT IFVATMATIL SFTTGSILGF LAAVLGGWAD QVMSRTVDLI MSIPSLITAL
121 VVLAMVPVTI PVLILVMGFL DATRVYRLAR AVAVDINVMD YVEAAKLRGE GRAWVIFREI
181 LPNALSPLVA ELGLRFIFMV LFISTLSFLG LGVQPPLADW GGIVKENKDG IVYGIGAALY
241 PAVAIATLAI SVNLVADWVL NRTTSLKGGR G
SEQDB ID: 3101377FAE
Reference:
3101377
Name: peptide/Ni/opine uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEPLLKVRG LKIGATVYPP GEKPHDIEIV HGVDFDLERG KVLGLIGESG AGKSTIGLAS
61 MAYGRGGVKI TGGEVWVNGR DILKTSLKDI RGLRGGEVTY VSQSAAASFN PAKKIMEQVI
121 EAAVEQKKFS KPEAEARARA LFAKLGLPDP DNIGERYPHQ VSGGQLQRCM TALALCPEPD
181 LVVFDEPTTA LDVTTQIDVL MAIKEAIRDT GVGALYITHD LAVVAQVSDD IMVLRMGDMV
241 EYGETDQIIN RPQEEYTQAL VSVRSIEHEE KKPTPDPVLS VKGISARYRG LAFDVLHDVT
301 VDLHPGQTLA VVGESGSGKS TLARVITGLL PPREGEINFA GRKLSRDLAG RSREDLRELQ
361 MIYQMADTAM NPRQTVGTII GRPLEFYFGL RGAEKRKRII ELLDEIEMGE KFIDRYPAEL
421 SGGQKQRVCI ARSLAAKPRM IICDEVTSAL DPLVADGILK LLLDLQKIED VAYLFITHDL
481 ATVRAISDSI AVMYQGRVVR YGPKSQVLSP PFDDYTDLLL SSVPEMRLGW LEEVVAHRKM
541 ESAGN
SEQDB ID: 3101377FAF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRHLAMASA VCFSTILSAG SGQAQTWDGR YDIVPGAVST DAGYAARMFD RQDDVTNKTV
61 LALRARQSGA LQDYRLYLGG RFLGSVIHES TNTTGKFPIL SRLPPTHTLG TSDTYGVVNE
121 ASLNATLTLP WVTAFVQGEY TEVEYPGQDA TQLRKYWIAL GDLNQSPFYL AIGRKTVNFG
181 NFASYAPFTH THSSHYFWAQ SDDPLIELGY VTERTELALS LLPAHRGLRV VSSPKNNGDY
241 ENFAFNASHR FDLRGDMMLK LGAGYLRGTI YDSTIAHHPP GTGINRSWNG AYNVNATLSG
301 SNFDLMAEFT QTEEVWPATG HSVNATTVQG RYRASVLGKP VTYSLAASRG IQGAKGTAWR
361 KMDQVVLGME MALNPHLTIG AEYMFNDGFV PLIMPTVTAV NGVRSHTVIG GIKLTF
SEQDB ID: 3101377FAG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSMYRFGSR PESAGSTPKD SVGYRRNAER ESLMDRKLLL IILDGVPYRN FRRLFGNLEG
61 WVQSGEARVW KLRAVLPSIS ASCYASIHTG VTPQEHGCTG NGNVFRLSHK DIFSQVRAGG
121 GVTGAVTHSF WSQFFNRHPF DYVRDVEYDE PESDTINHGR FHTMTGYGHD NQMTPSDVDL
181 FATLTNLCLR FGLSYGILHT CTLDSMGHRF FHDCTEMDHA CFVMDEMLAP FIPRWRQLGY
241 DVIVTADHGQ DERGHHGGRH PLQQETALYY FGDAEGPDPE TVIDQLQLAP TILDRLGAPI
301 AETMKAGSFL T
SEQDB ID: 3101377FAH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLLLALLL ALPLPALADD GCHDLWFTRN LIMDRAGYCF GSTLGQAAFD NRGCIGKSVS
61 LGAAEQRLVA HIRALEQSHG CRVNTGQTWL DLDDVFWRRQ LWVLPVRDEF ESACLGWLGP
121 VIALRAGPGH GTAQIGQILP GDTVGYAHIP VDGWTYVTAH APDWQVKSGG WLDLSIPEQC
181 RDFAG
SEQDB ID: 3101377FAJ
Reference:
3101377
Name: lipase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYDRLIDAE TWAFIRRTSE SYPEDATGLS IAAQRQVYDA MCRAFHAGRP KGVQAVDRDA
61 NGVPVRLYWA GQPTRTVVYA HGGGFVLGGL DSHDDVCAEI CASTGYRVVA VDYRLCPEHH
121 HPVQLDDCLT AVGWAETEFG DPIVLAGDSA GGNLMAAVTH RLRGQRREIW GQVLIYPLLS
181 ARPEAPSYRE HAEAPMLSTA DVAFYQSVRF DGPVPAGDST WAPLSDSDFS GLPPTVAVTA
241 DCDPLRDDGR DYCAAIAAAG GRAAWINEEG LVHGYLRARS SVTRAADSFE RITLAIEALG
301 QGLWPYD
SEQDB ID: 3101377FAK
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARVTGLWGG LLMPFAGLED RARVENEMPW EARDVPATLH QLLTRTATRF PGHKAMSYQL
61 LSGPTDKAET LTWSQLLSKV NQTANLFRSL GIGENDVVAY VLPNTSETLI TMLAGAVAGI
121 VNPINPLLEP EQIAAILRET NAKVVVTLKP FPKTDIAQKV AEAVRHAPHV NTVLEVDLNR
181 YLTPPKSWIV PLVRPKMADK EHLAHADYLS FNREMRKQPT ELTFADSTGD RVACYFHTGG
241 TTGMPKVAQH KYSGMIYNGW LGHTLLFNEE DTIMCPLPLF HVFACHVIVM AAVSSGAHVV
301 FPTPAGYRGD GVFDNFWKLI ERWKVTFIIT VPTAISAKMQ RPVDADISSV KTAFSGSAPL
361 PVELFRRFEK ATGVTIVEGY GLTEATCLVS CNPVDGEKKI GSIGIPFPYS DVKIIKGTPD
421 GPVECAVDEI GEICISNPGV YAGNTYTEED KNKDLYYYGT HLRTGDLGRF DADGYLWITG
481 RAKDLIIRGG HNIDPAEIEE ALLGHPAVAF AGAIGQPDAH AGEVPCAFVE LVEGGKVTEA
541 ELLEHCKVHV HERAAHPKHM TILPELPKTA VGKVFKPDLR KNAITRVYNG ALTEAGLAAR
601 VVSVIDDKKR GLVAQLAAHG ATEDEVAKVL GAYTRPWEWA E
SEQDB ID: 3101377FAL
Reference:
3101377
Name: LysM/phospholipid-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLWSFVKDS GKKLFGGGEE EPQVEALQKE IADLGLDASG VEISVEGDTV RLEGAAASDE
61 LKEKIILAVG NVEGVGAVDD QTTGGGGEPV FHTVAKGDTL WAIAEKTLGK GSRYAEIFEA
121 NRPMLSHPDK IYPGQMLRIP QD
SEQDB ID: 3101377FAM
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding/permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHLDLFEGS VRADCLTLMD RAAMKLDLAR VAGRIRTQGR ISQPMARRPT SPVASEERAG
61 SKKVGVLSAL WPFMMPYKAL MAGALMALVL TASMSLALPL AVRRVVDNFR IENGDLLDVY
121 FLAALGIAAV LALGTGIRYA LVTRLGERVV ADIRKAVFDR VIGMSPEFYE RIMTGEVLSR
181 ITTDTTLIQS VLGSSASIAL RNMLLFAGGL VLMLLTSAKL TGLVLLLVPA VLVPILVLGR
241 RLRAISRENQ DWIAASSGNA SEALSAVQTV QSYTNETASR AAFAEVTETA YDVSRRRIAT
301 RAVLTVIVIF LVFSGIVGVL WMGANDVRAG VMTEGTLIQF VIYSVIMAGA VAALSEIWSE
361 LQRAAGATER LVELLNAADS VNDPVQPAAL ALPVQGEIAF DNVTFRYPAR PDQVALDGMS
421 LTVRPGETVA FVGPSGAGKT TVIQLIQRFY DPQSGRVLLD GQDLTTLSRA DFRRHIALVP
481 QDPVIFAASA RENIRFGRPS ASDAEVEEAA RAAAAHEFIA ALPEGYDSFV GERGVMLSGG
541 QKQRIAIARA ILRDAPVLLL DEATSALDAE SERAVQQAVE RLSADRTTLI VAHRLATVKK
601 ADRIVVLEAG RIVAQGTHDE LVAGGGLYAR LARLQFTDGL AAE
SEQDB ID: 3101377FAN
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQHWRMRHL ALACFLLAPG AALASDCPTA PDHSERIAHL IEDIRAAPNE MQARTISNRM
61 WEIWADAPDE AAQAILDNGM SRRRAWDLLG ALSEFDRLVA YCPDYAEGYN QRAFANFLRQ
121 DFAAALIDLD RALALSPNHV AAMSGRALTL MGLGRIDEAR SVLNQALELN PWLPERGLVA
181 PGGPLEPKGK DI
SEQDB ID: 3101377FAP
Reference:
3101377
Name: Pro dehydrogenase transcriptional activator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: putR
Sequence:
1 MQMDLPDLDR YDRAILNQLA GDGRISVADL ARRIGLSKTP TQARLKRLEA TGIITGYRAL
61 VDPIRLGLDH VAFVEVRLSD TREKALAEFN AAVRRIGEVE QAHMIASNFD YLLKVRTRSM
121 TEYRAVLAER ISSLPHVSST STFVAMEAVK EPGMLGALES VT
SEQDB ID: 3101377FAQ
Reference:
3101377
Name: bifunctional PutA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: putA
Sequence:
1 MTHALRTHID SQTYADQSAL LDQLVAQAAL SEVDRAAICA AAAGLVRDIR SSTAPGLMEV
61 FLAEYGLSTD EGIALMCLAE ALLRVPDADT IDALIEDKIA PSDWGKHLGH SSSSLVNAST
121 WALMLTGKVL DERKASPVGA LRGAIKRLGE PVIRTAVSRA MKEMGRQFVL GETIQSAMKR
181 ASGMEAKGYT YSYDMLGEAA RTEADAARYH LSYSRAIAAI AEACTHGDIR ANPGISVKLS
241 ALHPRYELAQ DARVMDELVP RLRALALLAK AAGMGLNVDA EEADRLSLSL QVIEAVMAEP
301 ALKGWDGFGI VVQAYGPRAG LVIDTLYEMA QRHDRKLMVR LVKGAYWDTE VKRAQVEGVD
361 GFPVFTQKSA TDVSYIANAR KLLSMTDRIY PQFATHNAHT VAAILHMAKD GQPYEFQRLH
421 GMGETLHNLV LTANKTRCRI YAPVGAHRDL LAYLVRRLLE NGANSSFVNQ IVDENVPPEV
481 VAADPFETVK APAKPLKRGP ELFAPERPNS MGFDLGHQPT LDAIDAARDP FRSHRWQAGP
541 LLAEEASPEA EEAVVNPADP HDVPGSVAPA SAADAELSLA RAQPWQAPAA ERAAVLNRAA
601 DLYEAHYGEL FALLHREAGK TLPDAVAELR EAVDFLRYYA ANIPDAASAG IFTCISPWNF
661 PLAIFSGQIA AALATGNAVL AKPAPQTPLI AHRAVQLLHE AGVPRDALQL LPGGPAVGAA
721 LTSDPRVSGV AFTGSTATAQ KIRAAMAANM RPGTPLIAET GGLNAMIVDS TALPEQAVQA
781 VIESAFQSAG QRCSALRCLY LQEDIAEDVL TMLKGAMDAL NLGNPWALST DSGPVIDEAA
841 RKIITDHVAG ARAEGRVLKE LALPPEGTFV APTLIKVAGI GALEREIFGP VLHVATFRSN
901 ELDQVIAAIN ATGYGLTFGL QTRIDDRVQH VTEAVHAGNI YVNRNQIGAI VGSQPFGGEG
961 LSGTGPKAGG PNYMARFCAP DRQQAAADWA APMATLPRAT GTPAPVRVQS LPGPTGESNR
1021 LSEMARPPLL CLGPTAATVA TQAQAVEALG GTAIRATGAL AAEALETVEG ISGVIWWGDE
1081 ETARAYELAL SRRSGPILPL IPGLPDGARV LAERHVCVDT TAAGGNAALL GGMG
SEQDB ID: 3101377FAR
Reference:
3101377
Name: rhomboid family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFPIRDHNPS GRTPYVVYLL LAANIAIFLA TLGIMDDPRL IGRFYYDYAI IPARISDGDG
61 WQTLVTSIFL HGGWMHLGGN MLFLWIFGDN LEDEMGHLGF ALFYLAAGIG AGLIHVLSGP
121 GSMVPTIGAS GAIAGVMGGY LLLFPRARVD ILLILFVYFR IFTIPAFVML GAWLGFQFLG
181 GFSSDPDTGG VAYWAHTGGF AVGLVLTLPL WLKRGGRGFW QCTDGHPPHP EQKYRLSPSR
241 IPKIPRS
SEQDB ID: 3101377FAT
Reference:
3101377
Name: inositol 1-monophosphatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGSANLNIM IKAARKAGRS LVKDFREVEN LQVSMKGAGD FVSKADIAAE AILKEELRNA
61 RPTYGWIAEE GGVEEGEDPT RRWIVDPLDG TTNFLHGLPH WAISIALEHK GKVVAGVIYD
121 AAKDEMFFAE KGEGAWMNDQ RIRVSGRHRM IEAVFATGLP FGGRADLPLT LQDLARLMPV
181 CAGVRRWGSA ALDMAYVAAG RYEGFWERRL NAWDVAAGII IVKEAGGLIE ALDPEDSILD
241 SGEVICANGN IFDPFAKVIR G
SEQDB ID: 3101377FAU
Reference:
3101377
Name: NADP-dependent oxidoreductase, Isotype: L4bD family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRMYRIAL ASRPTGAPEA ANFSLEEAPV PTPGPGEVLV RVHYMSLDPY MRGRMDDAKS
61 YAAPVPIGGT MEAGGVGEVI ASNDPGFAPG DFAFGMFGWA THGVQPGKML RKIDPKVMPI
121 TTALGVLGMP GFTGWFGLME HGRPKAGETL VVAAATGPVG SMVGQVARLA GLRTVGVAGG
181 ADKCRIATET FGFDACLDHR AYDSAADLRR ALAAECPDGI DIYFENVGGK VLEAVLPLMN
241 NFGRIPVCGM ISWYNAGGLG AGASDPGLTG PAIWRSILVK FLSVNGFIIS NHFDRYPAFL
301 AEIAPKLASG EIRYLEDVAE GLENAPAAFM AMLRGGNTGK QIVKLI
SEQDB ID: 3101377FAV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTYHEFSQE DIQHIIDAGQ AHHDSVNLKA MGPSDAMLHA SPLVLGETCI SVTVENHSVC
61 LNLPIIDKKI CFPIPVSVPN GTAAKACLKI CTTIGIPTGV CVTISALGMQ IVHQCFGKC
SEQDB ID: 3101377FAW
Reference:
3101377
Name: transcriptional regulator, Isotype: MetR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metR
Sequence:
1 MHIEFRHLRT IKAIHDCGGL ARAADQLNIT QSALSHQIKG LEDQAGVELF VRRSKPMKLS
61 AAGMRLLRLA EQILPQVEAM QAEFSSLRDG RSGRMHIAIE CHACFEWLFP VLEAFRKNWP
121 DVDVDIRPGL AFDALPALQK EEVDLVVSSD PEEIAGVEFV ELFDYNAVFV AASTHPLAAK
181 PWVEAEDFRG ETLITYPVER TRLDVFSQLL IPARVEPAQV RQVELTAVIL LLVASNRGVS
241 VLPDWVVREV KYSSDYVTRP LTETGITRRL YAAVRSEDLE KPFVQELVTL ARSEARKLQS
301 R
SEQDB ID: 3101377FAX
Reference:
3101377
Name: 5,10-methylenetetrahydrofolate reductase, Class: EC1.7.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metF
Sequence:
1 MLRVRQEAKH RPLRRMTAQM TAPQISFEFF PPKNLEASFR LWDTVQVLAP LAPRFVSVTY
61 GAGGTTRELT RDAVATLHKS SGLNVAAHLT CVQASREETL AIADSFAQAG VTDIVALRGD
121 PPQGEGRFTP HPGGFANSVE LIQALAETGK FAIRVGAYPD IHPEASNAQA DIDWLKAKLD
181 AGADEALTQF FFEAETFFRF RDACAKAGID KQITPGILPI ENWKGARNFA RRCGTHIPAW
241 VEDAFDKATR DGREDLLATA ICTELCSELI EGDVDKLHFY TLNRPELTRD VCHALGVTPK
301 VALQNVA
SEQDB ID: 3101377FAY
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFANGPEEL LGPADMAHMS GLDFMQGILD GRLPAPPIAR TMGYHLHSVD MGRVAFRGTP
61 TFDVCNPLGA VHGGWYGTLL DSAMACAVQT MVPQGAAYTT LEYKINIIRA IPTGTEVECT
121 GIADHVGRST GVAHGEIRGV TDNRLYATGS TTCIVLNLPR G
SEQDB ID: 3101377FB
Reference:
3101377
Name: penicillin-binding protein, Isotype: 1C
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pbpC
Sequence:
1 MMPRPARWLM VLALVLWAGA ALRDGANRWI DATQLPPVLT ETGVEIRDRN GALLRAYQVG
61 DGIWRLAPGA VDSGFTRMLI RYEDKRFADH AGVDPLAMLR AAGQALWYRR PVSGGSTLTM
121 QVARLIEDGP TGRWAGKLRQ IRVALALERR LDKQRILALY LTHAPYGGNL EGVRAAALAW
181 FGKEPHRLTP AQSALLVALP QAPEARRPDR HPRAARAARD RVLHRMLAQG VLSGEAMQAA
241 LGEAIPQAQR PFPLLAPHLA DRLRAADPAA RRHDVTLDAG LQSRFEDLLA KAALEAGGRL
301 SAALMVVDHR SGEIFASVGS AGYSAERQGF VDMTRALRSP GSTLKPFVYG LAFDQGLAHP
361 DTLILDSPVM FGRYAPRNFD GEFRGELRVR EALQLSLNIP VVRLTDDLGP VRLMAALRRG
421 GATPRLPGGT PGLAIALGGV GLTLQDLVQL YAGLAQGGQG PLLRHALGEA AQPAGRLFSP
481 SAAWQVGDIL AGLAPPPGAR RGVLAYKTGT SYGHRDAWAV GFDGAHVIGV WLGRADGTPV
541 PGAFGGDLAA PVLFEAFGRL KPAFDPLPPP PPDTLILPTA ELPLPLQRYR PRGAVFEVEP
601 DAPQLLFPPD GAVLTTDGGP VTVKLRGGQA PFTLLANGRP LATGIFVREF DVPSPGSGFA
661 TLIVLDARGR ASRAELRLE
SEQDB ID: 3101377FBA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNLSRLSRK LLGWLGRPLS AAHSGEVRQR GPQTHVIILD GTMSTLEPGR ETHAGQTYRL
61 MCEMGARVSV FYEAGVQWTS WRTTPDVMMG RGLNRQIRRA YGYLASRYRP GDRIFLIGYS
121 RGAYAVRSLA GVIDMVGLLK AEHATVRNIR QAYRHYECDV QGPHAQVFRD LYCHRDVMIE
181 MVGVWDTVKA LGLRLPVLWR LSEQRHAFHS HHLGRSVRHG YHALALNETR NVFEPILWDC
241 KPEFRGHVEQ VWFRGTHGDV GGQLGGDERA RPLANLSLVW MLERAEHLGL PLPKDWHARF
301 PTDPNAPSVG TWSGWGKIFL LRSARTVGRD PSERLHESVI GDTLPEGLPA PYLRSRSFG
SEQDB ID: 3101377FBB
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: large
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEKFGKSQPV TRVEDHRFLT GQGRYIGDAA PGDALVAMFF RSPVAHGEIL DLDLGAARQM
61 AGVHLVLTLA DLEAAGVKVG LSGTTMANRD GSQGAAPERP MLARDHVRFV GEPVAMVVAE
121 TADQARDAIE AMGMDIRDLP VVTKPVPGGP AIHPEAPDNR AFDWGLGDEA ATEVAFASAA
181 HVVSLRVDDN RIIANSMEPR GCYAEMAEGR LHFAYGGQGV WGMKAQLAEK LGIDPEALRV
241 TTPDVGGGFG MKAMPYPEYF TVAHAARVLN RPVRWISDRT EAMLSDNHGR DLTSLAELAF
301 DADLRITAYR VRTRCNLGAY NSHFGQAIQT QLFSRVLTGV YDIQTAWLQV EGYYTNTTQV
361 DAYRGAGRPE AIYVLERVMD RAARDLGVSP WEIRRRNFIR AEAFPYQTAT GETYDVGEFD
421 RLLRLAEAEA QGFAARRAAD AKRGLLRGIG LCYYIESILG DPSEGAEIAF NEDDTVDLMV
481 GTQSNGQGHE TVYARFLSDQ TGLPMDRIRV VQGDSDRIAQ GGGTGGSRSV TVQTNATLTT
541 VDTMVAAFTP YLADKMGVAP EAVHFDHETF RAPGSNLTPS LLEAAAMARA DGRSDLLRHA
601 ARAKLPGRSY PNGAHLAEIV IDPETGQAHV DRYRVWDDFG NLINPLLAEG QVHGGVAQGI
661 GQALCEHVVH DGEGQLLTAT FMDYALPRAH EVPIIGFTSV PVPSTANPMG MKGSGEAGTV
721 GALAAVANAV QDAIWDRGVR QADMPFTPLR LWEMLNAEPV AAE
SEQDB ID: 3101377FBC
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVSRIPSLNW LRVFEAAART QSFARAGAQL NMSAAAVSQQ VKALEGHLGA ALFERRAHSV
61 VLTETGRAYL PGVQQSLLML ETTTAGLFGA GGEQIVYVRS ILLFAQGVLA PALGGFMAAH
121 PGIDLRLSTG NDVADFQGSV ADMQIVFGNP ALFGGQADDL MGERLYPVAH PDLAAGITRP
181 EDLLRHRLID VSAHRAGWLR LFEALRLSPA AGQFLFVDNT VMAAALAAEG VGLALARAPA
241 SDMLMARHGL VRCLPGVEAP GLERYHLVCE ERARLRRPAR QFRSWLLDHL GAGPGQAPSP
301 FAEIGLDPRI GRLVEMQRQK GMLVAGVFDG VQPVAKGGFK VPHQPRRGHL VPPIPQCQRR
361 TPGGHAGARR GDVLSIHMQG IAAEQGQGGL AGNRAQDRVI GHQGQGETAG QAHADHADPG
421 GVFALADVAG KGPHPGGNRA LPALEEHVEL ASDTEQAGHV AQGGGLAERA EEMRQVDGKP
481 RRDQSIGQRQ RLGADPGQLL QHQDGRARAF DMDIMAALPP AAQRGDKREA RIRVPTGHAG
541 LYAFC
SEQDB ID: 3101377FBD
Reference:
3101377
Name: phytanoyl-CoA dioxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTGKTYRSE PGLCTATLQH SEQTETPMPN PIPTDQGRLS TTQTAQYWQD GFLHPLRVMS
61 EGEAATLRAE LEQIERDWLA ADLPLPLNMY KRVNAHVVMP LAARIARDPR ILDLVEGVLG
121 PDLLVWSAEF FIKEPRTTHV VGMHQDLTYW GMGETPDQVT AWLALSPATV ESGCMDFVAG
181 SHKNPILPHT DTYSEHNLLS RGQEIAVDVA ETDKTHIELA PGQMSLHHGL TIHGSGPNRS
241 DDRRIGMAIR YLNPNARQLV AERDYAMPAR GTDSSGNFIP VEAPARLFAP EALALYERIR
301 ADQAKALAQG ASSAVPLYQT TG
SEQDB ID: 3101377FBE
Reference:
3101377
Name: Val-tRNA synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAMEKTFDAA EAEARITKAW EEAGAFKAGA NRSRDESFTI MIPPPNVTGA LHVGHAFNNT
61 LQDILTRWHR MRGFDTLWQP GQDHAGIATQ MQVEKMLAAT QQPSRRELGR EEFLKKVWEW
121 KGQYGGTIVE QLKRLGASCD WSRNAFTMAG AAGDPRTGHE NSPNFHDAVI KVFVDMYNKG
181 LIYRGKRLVN WDPHFETAIS DLEVENIEVA GHMWHFKYPL AGGATYTYVE KDEDGNIVLE
241 EERDYISIAT TRPETMLGDG AVAVHPSDER YAPIVGKLCE IPVGPKEHRR QIPIITDEYP
301 DKNFGSGAVK ITGAHDFNDY AVAKRGGIPL YRLMDTRGQM RADGAPYAAE AGKAQDYARG
361 RAFTENEIDV INLVPDHLRG LDRFEARAKV VDEITSEGLA VMTVASDPRL GTTALKPGAE
421 GADAIVPLVE AKPIMQPFGD RSKVVIEPML TDQWFVDAEK VVGPALDAVR DGTVKIIPES
481 GEKTYYHWLE NIEPWCISRQ LWWGHQIPVW YGPNRDDLGA SYKAFCAASE QDALLLAQNY
541 YGANVEVDFD SGPEELSGGI AFGTIEGPGG QKTLQSVSLT RDPDVLDTWF SSGLWPIGTL
601 GWPEDTDEMR RYFPTSVLIT GFDILFFWVA RMMMMQLAVV DQVPFHTVYL HQLVRDEKGK
661 KMSKTTGNVI DPLEIVDEFG ADALRFTNAS MAAIGGVLKL SKERITGYRN FTTKLWNAIR
721 FAEMNEVFTD AVPQLSAAEL APKAAVNRWI IGETARVREE VDAALDSYRF NDAANALYAF
781 VWGKVCDWYV ELSKPLLQGE DTEAQAETRA TMRWVMDQCL VLLHPIMPFI TEELWGLTAE
841 RAKMLVHADW PTYKAADLVD DAADREMNWV ISVIENTRSA RAQMRVPAGL YVPMIVTEID
901 DHGQAAWDRN EALIKRLARI DSLTKADAMP KGCISIAAPG AAFGLPLAEI IDIGAEKDRL
961 EKAKGKLAKE LGGLRGRLNN PKFVESAPDE VVEEARENLA AREEEEARLN EALARLAELG
SEQDB ID: 3101377FBF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTPIGVATG GGFCYAARML NTLRSLIERQ ILKARAEGKL SGLEGEGKPL PDRSQEALSD
61 PAVAAGFRIM AQAGVIPEEF SVKKQLDDAR AAFAQLSDPA ERKAAMARIA DLEMRYNMAR
121 DARRAFLK
SEQDB ID: 3101377FBG
Reference:
3101377
Name: adenylate/guanylate cyclase/hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERRLCAILA ADMAGYSRLM ERNETDVLNR QKLYRRELID PAIAQAGGQI VKTTGDGMLA
61 RFDTAQAALR CALEIQQAMQ QREEDTPRKE RIQYRIGINI GDIVLEDGDI FGDAVNVAAR
121 LEAISEPGAI CVSDIVHQIT QDRVSEPFTD LGLQKVKNIT RPIRVWQWVP DADRDQSHDP
181 QPSHVQHVSF CIAGDGTQLA WARVGKGPSV LKAPNWLNHL DYEWRSPLWG PFLEQMSQRC
241 DLVRFDQRGN GLSDRDPHEI SEDAMISDMR SIVQAAGLDR FLLFGISQGC AFSVRYAAEN
301 PDKVAGLILV SGYLRGSLKR GSPEQAAISE ATNVLIREGW GSPNPAYRHL FTESMMPDAT
361 EAQKAVFDEL QRVSCSPEVA ARINTMNATV DVSGFAPRIR VPTLVLHSEG DRRVPVAEGR
421 RMAAMIPGAR FVTLPGNNHA LIDNSPALDL FLSEFSSFLA EIVES
SEQDB ID: 3101377FBH
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARVSVEYKD HVAFVTLTRG DKMNALDQAM FQAIIAAGQE VAASDARAVV LSGEGKSFCA
61 GLDVANFAAF AGQDPVEMLM PRSHGDTNDF QEVAMVWRRV PVPVIAALHG AVYGGGLQIA
121 LGADIRIAAP DTRLSVLEMK WGLIPDMGGM VLLPQLVRSD VLRLLTYTAR PIGAEKAAEW
181 GLVTDLADDP LAEATALAQE IAGKSPSAIR SAKRLIDQAE AMSREEVLLA ESQEQAQLIG
241 KPDQMEVIAA QMQGRAPVFK
SEQDB ID: 3101377FBJ
Reference:
3101377
Name: strictosidine synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRSCAPHKR KAGRRARLAF GALASHGARE NTEVPMRYVL ILLLALFGYL LFWPIPVAPV
61 AYHPPETPGF TGDFAENRVL DRAEFVTLPD GEIGPEDLAV MPDGTVYTTS LAGNLYRIDG
121 AVPQLVDRLG GRPLGLKAGP DGALYIADSF RGILRWTAPG EVETVVDQID GAPVIYANQL
181 DLGRDGTIYF SNSTDRFDPR TLGGTKPTSV MTVWEQSDTG YVARRTPDGR VEKIATGFVY
241 TNGVALSPDE DFLLINETGR ARVHRLWLTG DKAGQSEVFL DNLPGYPDNI EAQGDGTYWL
301 AFASPRVPAE ALMPYPFLRK VVWRLGPKVR PAPIHRGMLI QFDGTGRILR TVQDPDGRLG
361 ITTGGKQVGA RFYVMTLDSP GFARMDSADL R
SEQDB ID: 3101377FBK
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGAPPCAYV ARMTGPRYTP LAQSLPATVP FVGPETQERQ RGAPFAARLG ANENIFGPSP
61 RAIEAMQRAA AEIWMYGDPE NHDLRAALAT HHGVRPENIV VGEGIDGLLG YLVRLMVGPG
121 DAVVTSEGAY PTFNYHVAGF GGVLHKVPYA GDHEDPQALF AKAAEVGAKL VYLANPDNPM
181 GSWLTGADIV AAMQALPEDT LLVLDEAYVE CAPECTAVQV DLDDPRLIRM RTFSKAYGMA
241 GARVGYALGA PELIAAFNKV RNHFGMNRAA QAGALAALAD GGWLTHVQEQ IAAARTRLGE
301 IARENGLTPL PSATNFVTID CGSDGNFAKC VLDNLVSSGI FVRMPFAEPQ NRCIRVSCGP
361 KADLDAFAAA LPGALAAARS
SEQDB ID: 3101377FBL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVWPKMRMM DDRRIGRAPD YTVPALVMLG VNLTWILVLV WALWGFAAAL LLAALVHHVI
61 TRLATRAR
SEQDB ID: 3101377FBM
Reference:
3101377
Name: Ser-glyoxylate transaminase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGNISLAQG RGYLAIPGPS VMPDAVLRAM HRAAPNIYAG ELVDMMPGLM ADLRRVVRTA
61 HHATIYICNG HGAWEAALSN VIAPGEVVLV PASGRFAHGW AEMAEGLGAE CQVIDFGKSA
121 PWDMDRIAEA LKADTAHRIK AVLAVHVDTS SSIRNDIAGL RAVLDALGHP ALLMADCIAS
181 LGCDVFEMDG WGVDVTVTAS QKGLMVPPGV GFVFFNERAA AKRASMPRVS RYWDWVPRAN
241 PTDFYQYFDG TAPTHHLYGL RTALDMIHAE GIEHVWARHA VLARAIWAAC SVWAEGGDLV
301 LNVADPAHRS HAVTALRLDS GKGTALRQWT ETNLGLTLGI GLGMAAPGDP AYDKFFRLGH
361 MGHLNGQMVM GLLGGVEAGL RALDVPCGKG ALEAAAEVLA AG
SEQDB ID: 3101377FBN
Reference:
3101377
Name: efflux ABC transporter, Subunit: transmembrane ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSQARDRPE HLHPARHLLK WAGHGFYPAP SPPHEGRKMS AKPMSSRELV GWLWQNYLKS
61 RMGLLGVAFL FMLLEGSMVG AISYMMQPMF DEIFVNGNGD ALVWVSLAFL VIFSLRGMAS
121 VGQKVLLARI SQETAAHLRF DLLKRLIQQD TAFHQTHPPG FLIQRVQVDV GSVNQVWQVI
181 ITGAGKDLVS LVVLIGVAIN VDLIWTLVML VGVPIAFLPI AAAQRYVRKK AAMARDQGAT
241 LATRLDEIFH GIVPIKLNAL ERYQLDRFDG HMKTYVRSEV RASFGTASIT GLVDVMAGLG
301 FMGVLLYGGA EIIAGEKSVG QFMSFFTAIG LSFDPMRRLA SISGTWQAAA AALERIKDLL
361 DAPILLLSPP KPVAAPSGLP AIRLQDVSLS YGDAQVLRNL SLTAEAGKTT ALVGASGAGK
421 STIFNLLTRL VDPQSGAVTV GDVAVEKMSL EKLRSLFSVV TQEALLFDET LRENILLGRT
481 DVSEARLQEV LDAAHVSDFL PKLEHGLETL VGPRGSALSG GQRQRVVIAR ALLRDTPILL
541 LDEATSALDA QSEKVVQAAL DQLSGGRTTL VIAHRLSTIR NADKIVVMER GEVVDQGSHE
601 ELLARGGIYA DLYRLQFEGG KELVDPVGVA AQERPGTEEP QRASAWYRRL MSRILG
SEQDB ID: 3101377FBP
Reference:
3101377
Name: 2-dehydro-3-deoxyphosphogluconate aldolase, Class: EC4.1.2.14;EC4.1.3.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: eda-1
Sequence:
1 MTSRDTRAIC EMAPIVPVLV IDDAAHARPL AEALVAGGLP ALEVTLRTPA ALEAIRIMSE
61 VPGSVVGAGT LITPEDVRAA KAAGARFGVS PGATDRLLAA CEEEGLPLLP GAATASEAMR
121 LLERGYDMLK FFPAEASGGA PALKAIGAPL PQIAFCPTGG VSPQNAESYL SLPNVVCAGG
181 SWVAPKDLVA AGDWAGIEAL ARDAAALRRG
SEQDB ID: 3101377FBQ
Reference:
3101377
Name: phosphogluconate dehydratase, Class: EC4.2.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: edd
Sequence:
1 MVHATIAQVT ARIVTRSAAT RGPYLARIDE ARDQGPARAH LSCSGQAHAY AGAGADQQAL
61 ATGSTGHLGI VTSYNDMLSA HQPFERYPDV LRQAARSVGG TAQVAGGVPA MCDGVTQGAA
121 GMELSLFSRD VIAMAAGVAL SHNTFDAAVF LGVCDKIVPG LVIAAQSFGH LPAVFVPAGP
181 MTSGLPNDEK AKVRQRFAAG EVGHAALMAA EMAAYHGPGT CTFYGTANTN QMLMEFMGLH
241 LPGASFVPPG TGLREALTAE AARRSLSLSA LGDNYTPVGH VLDERAYVNG IVGLMATGGS
301 TNLLIHLVAM ARAGGILLDW QDFAEISAVV PLVARVYPNG LADVNHFHAA GGLGYTIHTL
361 LEAGFLHPDT LTVAGRGLEL YTREPKLRGD VLSWEAGTET SLNDKILRPA SDPFQASGGL
421 SRLSGSLGTA VMKVSAVAPE HRVVEAPVRV FHDQNEVKAA FKAGELTGDM VVVVRFQGPK
481 ANGMPELHSL TPILSILQGR GQKVALVTDG RMSGASGKVP AAIHVVPEAL EGGPIARLRD
541 GDLLRVDAEA GVLDILTEGV LARAPATADL SGNQFGTGRD LFAAFRAVVG SADTGASVFG
601 G
SEQDB ID: 3101377FBR
Reference:
3101377
Name: glucose 6-phosphate 1-dehydrogenase, Class: EC1.1.1.49
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: zwf-2
Sequence:
1 MVSRVIPVNA FDLVLFGATG DLARRKILPG LFHRYEVGQM PEEARIIGSA RTELSTEAFR
61 ADVRQAIEEF TPETPTRAAV LERFLLKLDY VAVDARGDAG WQALAAMLRP DVVRAFYLSV
121 GPSLFAGIAR QLDCHGMATP EARIVVEKPF GRDLETARAL NAGLRACFEE HQIYRIDHYL
181 GKETVQNLMA LRFANSLFEP LWNATHIDHV QITVAESLGI EGREAYYDQS GAMRDMVQNH
241 LVQLLCLTAM EPPSKFTPNA VRDEKVKVIE ALDPVPPGDI ARGQYRADKG GDGYLDHVGD
301 AQSRTESFIA LKVHVANWRW AGVPFYLRTG KRLRARVSEI VVQFRDPPHS IFPNVGPIHG
361 NKLIIRLQPD EGITLRTTIK DPGPGGFRLA EVPLDMSFAE ALGGDVRPQD AYERLVMDVI
421 RGDQTLFMRG DEAEAAWAWV DPIIAEWEKN RDRPYPYDQG SSGPEEALML LHRDGRRWRQ
481 IGG
SEQDB ID: 3101377FBT
Reference:
3101377
Name: phosphoenolpyruvate-protein phosphotransferase, Class: EC2.7.3.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADGTESESR KLLGRLREAM ATDEAGQARL DRITHLIADS MGTEVCSIYL FRDTDTLELC
61 ATEGLKPESV HQTRMRLGEG LVGRVAKSGK VVNTPNAPAA KGFRYMPETG EERYSSFLGI
121 PVQRLGEKLG VLVVQSRDAR EFSADEVYAL EVVAMVLAEM AELGAFVGEG AALSPLHQKS
181 ALFRGSTGQE GAAAGHVWLH EPRVVITNPI ADDPQRELER LNEAVDELRV GVDKMLEMSQ
241 NGDKEQLQVL EAYRMFANSK GWMRRMEEDI ARGLSAEAAV EKEQSLARAR MGQVQDSYLR
301 ERLADLDDLS NRLLRILTGQ GKQTGAELPP DPILVARNIG PGDLLEYGRS LKGVVLEEGS
361 VGSHAAIVAR ALAIPLVVHA ERITTEALNG DQILVDGDQG VVHLRPEDSV VAAFRDKIAM
421 QADAQARYAS IRETPAVTQD GQRINLVMNA GLMADLPSLE SSGAEGVGLF RTELQFLVRN
481 QMPKRSELVA LYSRVLDAAK GKRVVFRTLD IGSDKVLPYM KPTDEPNPAL GWRAIRVGLD
541 KPGVMRMQLQ ALIRAANGRA LTIMFPFVAQ AEEYHAARAE VDKTIAREKV LGHPLPETLE
601 IGAMLETPSL AFAPQKFFDD VGFLSIGGND LKQFFFAADR ENERVRRRYD TLNSSFLSLI
661 ERIVERCGIS GTPLSFCGED AGRPIEAICL AAMGIRTLSM RPASIGPVKS LLLRTDLGEL
721 RKIITDARHR GVQSVRPAVM DWLSQRP
SEQDB ID: 3101377FBU
Reference:
3101377
Name: Asp kinase, Isotype: monofunctional class, Class: EC2.7.2.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTLVMKFGG TSVANLDRIR RAAKRVGVEV AKGYDVIVIV SAMAGKTNEL VGWVNETSPL
61 FDAREYDAVV SSGENITAGL MALTLQEMDI PARSWQGWQV PLMTNSAHSQ ARIEEIPPHN
121 INQKFAEGMK VAVIAGFQGV SPEGRITTLG RGGSDTTAVA FAAAFEADRC DIYTDVDGVY
181 TTDPRICTKA RKLEKISFEE MLELASLGAK VLQTRSVELA MRYKVKLRVL SSFEEQSDTA
241 GTLVVDEEEI MESNVVSGVA YSRDEAKMTV VSVQDRPGVA ATIFNALSEG GVNVDMIVQN
301 VSEEGITDMT FSCPTDQVAR AEKAMNAVKD AGELEFEDLL VDYDVCKVSV VGIGMRSQSG
361 VAAKMFKILS DEGINIKVIT TSEIKISVLI DRKYMELAVQ ALHDAFELDK AA
SEQDB ID: 3101377FBV
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKNLLANLTA TAVIAASASV ALSQEASHFD PKGKPPSQET IAIIEALRGS LPFEDERDFE
61 EARKGFIAKP DFTQIMAEKG NVAWDIGSYD FLLQGEDFDT IHPSLQRQAV LNMSYGLYEV
121 MPDRIYQVRG FDLANFTVVK GDTGWIVFDP LTAKETAAAA LKLVNDTLGE RPVTGVVYSH
181 SHADHFGGVR GVVAEDDVRE GLVPIIAPVG FMDHAVAENV YAGNAMNRRL FYQYGVLLPR
241 SPFGHVDQSI GKNTAAGNLG LIAPTVVIED DIKELTVDGV RMVFQNTPGT EAPAEMNTYF
301 PDFKAFWAAE NITGTIHNIY TLRGALVRDA LEWSRQINAA LYLFGQDAEV MFASHSWPRW
361 GNERIQEVMR AQRDTYANLN NGVLHLANQG VTINEMHNEY SVPESLQQQW SARSYHGSVE
421 HNSRAVINRY LGYWDANPAT LIPLSPSESA PLFVEMMGGA GPIMARGQDL YDSGKYKLAQ
481 EILNKLVYAE PENQEAKDLL ADVFEQIGYQ QESPSVRNSF LAGAYELRNG IPSGASPKSS
541 GPDMVRAMDT YLWLDFLGVR LDSAKAGDRS FTINMITPDN GEKFVIELSN GTLTNLQGYL
601 ADDPDLTMVL NRSDLEPVMM GMATIEDQIA AGKVALAGDT GIIDELKAML VQFDLGFEIL
661 PGTGEQDLTP EANAFQQPEP ADTSGG
SEQDB ID: 3101377FBW
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHLKRHLPP LTSLLAFEAA ARLGSFTAAA EELNVSREAV SRQIRVLESH LGISLFERDA
61 NRALMGAAGA RFFATVSPNL NAIAVAAKEM AGEVSNGPLP ESATQPGDDE ELPSLLVVDD
121 TPQNIHHLHG LLKDAYRIIP QTSGKGALSF LSGELADLIL LDIRMPDMDG YEVCRQIKST
181 ASLADIPVIF LTSLDDPMDE TKGLEMGACD FITRPIVPAI LRARIRSHIE LRQAQTALEK
241 LLARRADRLE KAEQLLTGIC ADIGQFQSS
SEQDB ID: 3101377FBX
Reference:
3101377
Name: sensor His kinase/response regulator, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLKLKPAGI TRKIALAAAL LGVFSGLLLG VYTLLAEHSL RIGAARLNAD RIVRATLPQI
61 AGAYWEVDVP AVRAILNGLL EDPVILSASV EDPLLTEAQR DSSGLIDLSV SRQPLSEPPW
121 LGFLFQSGSQ AEKLSYALSN PRDGSEIGRL ALELSFRPVQ EDMVARSYVV LGSSILQALL
181 VTAAIFLIVQ LIVIRPLARL QAAALRVRDG YSFRLKGRDQ RMFDVNRQDE ISRLARAFRR
241 TVTELEASRD NLQELVDERT RELLEARNEA VEASQAKSIF LANMSHELRT PLNAIIGLSG
301 ILLRDGQSND NTRNLTDLRA AAKQLSENID SILDLSKIEA GELVLEQVWF RLDDLLDDVL
361 MQTRALMVGQ PVLLTWDYAP DLPDELCADP LRLRQIMVNF ASNAVKFTKE GEIRLLASYH
421 DGALRLGVRD TGIGISPEQI EGIFKAFGQA DGSTTRQYGG TGLGLSISQK LADKMQGKIQ
481 VDSEPGRGAE FTMVLCLPTR PAPQQGETKD LIKVEGTGGP VRQLQIMADR AAAALTSQIR
541 PVTVTVTAKH AEFALRSSGS MAGKRFALPI THGEFAAALS ELETGTGPTL PKNVFLAGRD
601 VLVVEDNPVN LYVFVSLVEA LGAKVRTATN GIEAVEQVAE AMPDVILMDL HMPLMDGYRA
661 LENLQGRYQA SLAPVVAATA NATQDEAERC IAAGFAGFVP KPIDPSKLHS ILADLCGSGK
721 YPGVDQKKGL FYAGGNRQHY EASLRRFHAS LREWFAALEA LADGPESQGR ADLLHAIKGA
781 ASTVGADGLA ELAAGAETGA VSIGKVAQAL SRMLEQFDAF SPHVAKKLPL NSDRLERIGA
841 LVRNRDILAL EETQNTALRG LLEPAAAAFE SLTAALTALD FETADQIVEQ LREALHDD
SEQDB ID: 3101377FBY
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRLFQILEA ICLIGIMMRP VHAETWVVGS MEGFAPFNYS INGEYSGIDV QILNEAAERI
61 GVTLDHRPLP WKRALLDFET GQLDAVFQLA PTPERFQKWN MVGPLRRTRT VFATLKGSPI
121 QDIRSLSDLD GLVVGVVSGF TYEARFDSYQ LLQREASLDD FTNLRKLLLG RSDLIVGGYE
181 TLHYVASELN ALDKLKFLPT PLAEHARYIG FHRTPEGDDM ARRLQAELER MQANRIPPEY
241 LRYYFSR
SEQDB ID: 3101377FC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGDLLLDPL VPLPLLIALA ALSLAGIALA LWRGLSGWAL RGLAALVLLA ALAGPVWQVE
61 DRAPLSDIVL MVEDQSASQG LSDRPDQTTS AADQLAASIE SRPNTELRRI IVGDGEGDTG
121 TQLMAALNEA LNEEPRARIA GILALSDGQV HDLDRAPALP APMHLLLSGR ATDWDRRLIV
181 RNAPAFAIIG EPVTLSLRIE DSGAVPAGQG ALAELQISVD GGPPERLTLP VGQDLELPVT
241 LPHGGRNVVQ FSVPVAEGEL TDRNNTALIQ MNGVRDRLRV LLVSGQPHPG GRTWRNLLKS
301 DSSVDLVHFT ILRPPEKQDG VPVDELSLIA FPTRELFLEK IDDFDLIIFD RYKRRGILPA
361 IYLDNVANYV NRGGAVLVAA GPDFATADSI YRTPLSPVLP ARPTARVIEE AYRAQVTEEG
421 ARHPVTAQLD SAGEWGRWLR QIEVTQDSGH VLMSGVEGRP LLVLDRVGEG RVALLATDHA
481 WLWGRGYEGG GPQLELLRRL AHWMMKEPEL EEDALWAEAQ GQTMRIIRRT LDTSVGSVTI
541 TRPDGGEDVL PMEEVSPGRF EALYQGPEIG LYRLREGDQS AVIGLGPAAP REFEATIATA
601 ALMEPLITPL KSGIFRLEDG LPTIRNVREG RPAAGRGWLG LTPRGAYETR DVRQTPLAPA
661 WLVLLLASGF VIAGWLREGR R
SEQDB ID: 3101377FCA
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHLIATTAL ASLTLAPIAA TAAECTNDAW NRIQERGKIV VGVKADYKPW GFRDTDGSII
61 GMEIDMAAEV AKTLGVELEL TPVVASNRMQ FLEQGQIDLM IATMTDRADR REIVGIVGPN
121 YYTSGTNILA PKALGFSSWN ELNGKPVCGV QGAFYNQIVE DKYGAQIVAF AGAAEARQAL
181 RDKKCVAFVY DDSSIGSAIA SGEWEDFEMP LASEDDSPWG LAVPKGEENC IFGRFMTGMQ
241 YSWHQNGSLI NWEAKWGIKP TAYLQELNAK LADQVAE
SEQDB ID: 3101377FCB
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAIGEIVGMT GFEAFFVQLA EDSPRWNFIW LYDEKQAGRI LSGLWMTVKL SIACVLLSLV
61 IGIAGAWLQG TRNRALRASV QGYIQFFRNT PPLVQLLFFY FALGQFTPVV TGTDGWTEIP
121 VISATGWAII SLSFFAGAFN VEIFRAGIEA VPHSTREAEE ALGMSRTQTF TNVVFPLALR
181 VSIPALNNNL VNLVKTTTQA FAIAVPELLY ESVSIWNDFP SAQNPTMLLL FVVYLGLVGV
241 LVFGMNSWER KMRIPGYGQ
SEQDB ID: 3101377FCC
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASNNFPGIT GPARTDLPVL KPYVLSGGTY DEMFLVRWLA GMPPQFILLL LLAWPTMAFA
61 QTASYGMGDA FAALWRWIPF LTFQGFVFNV VISVFSMLIG TVAGAALGLG QISRNNWLRR
121 LSWGVTQLFR NAPWLVILFI VLLAFPFEFE IFGVVIPVPA WMKAVIGLSL PIMANISEIV
181 RGAVMSVPSA QWEAAESLSF TRTQTLWQII LPQCFKRMIP PWMNWYAILT MATPLCSMLG
241 VGEIITFSRQ AMEAENNRPE LLVPFFGYAL VLFFAYCYPI ARITIALEKR YAVKL
SEQDB ID: 3101377FCD
Reference:
3101377
Name: Gln ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnQ
Sequence:
1 MNTWTSDQPI VSIRDVRKSF GPIEVLKGVS MDIMKGEVIC IIGPSGSGKS TLIRCINALN
61 DIQGGSITVE GQEVHDPELD RLQLRKKVGM VFQQYNLFPH KTALENVMMA PVKVLKENKV
121 EVEERARALL KKVRLEGKEH SYPGELSGGQ QQRVAIARSL AMRPDVMLFD EVTAALDPET
181 VKEVLVTIKD LAADGMTCIL VTHEMGFARE VADHIYFTDK GVIVEHGAPN TFFDNAQDPR
241 TKEFLSQIL
SEQDB ID: 3101377FCE
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRNKPSDQL PDFSLLRNFC VIAGSASLTE AAAKCDLSQP ALSQQLQRLE AVLGVSLMER
61 NTRPIRLTRA GKRLAEGLPR QLQELVRLVE HVRSTPDVSR KKLRIAMPDS MSCTMGAEFL
121 SVASSLAQSV ELSAGISPWA DDALLGRSFD LMVDSPPYDS LGYVNPVRIF NDPYVLVYPA
181 SLPPKRPEDF VVTDPQIAYA QTTKFGVRAA RIARSLGADA EPAFSFDSSQ SLLRFVQVGY
241 GWAVTSVLCL YQTPAALRDL LIFPAPPDAS RSLMLLSRTE EMRDLSQDVT HRLIKVFREL
301 VNGPWQKISP EAARFLRGAN PDIFADPETP SPPR
SEQDB ID: 3101377FCF
Reference:
3101377
Name: Gln amidotransferase, Isotype: class I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEILIVESS SPGIASARRE LGRAAPQNFS RVFAAAIPDI KIRVVEPYLK ELTCADFDGV
61 DGVVMTGAGD DWAADDDLAT PIRAACDLAL ETGRPVLGVC YGLQIATVCL GGKIAASPKG
121 KETGLALKVE LTEQGARHPM MQGRRQGFSV ACAHRDEVIR MPDGGQRLAY NAHSDVQAMS
181 VQQSGVDFWG LQYHPEISPS IVANAIREHG SLFSNTGIDI EDLLKVETDL ETAQRLGCSL
241 ADFELPNRTR ELINWIEYVA SKTTVAA
SEQDB ID: 3101377FCG
Reference:
3101377
Name: oligopeptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKLAEYDGP ILEIDKLSIS FFTRLREIPA VMDFSVTVQP GEAVGLVGES GCGKSTVALG
61 VMQDLGKNGR IVGGTIKFKG RDLAQMSAEE LRDIRGNEIA MIYQEPMASL NPAMKIGRQL
121 MEVPMIHEGV SADEARKRAL EVVSDVRLPD PERMLNSYPH QLSGGQQQRI VIAMALMSKP
181 ALLILDEPTT ALDVTVEAAV VELVKDLGKK YGTSMLFISH NLGLVLETCD RLCVMYSGEA
241 VERGSIKDVF DEMQHPYTQA LFRSIPLPGA DKNSRPLVAI PGNFPLPHER PPGCNFGPRC
301 DYFEAGRCDA QDILMEAVPG NDRHHTRCLK FREIDWNAPI MLAAQKEKGE IGEVVLKMDN
361 LKKYYEVSAN ALFGGGEKKV VKANETLSFE ARESETLAIV GESGCGKSTF AKVLMGLETA
421 TDGHILLDNR SIEQIPIEER DTKTVSDVQM VFQNPFDTLN PSMTVGRQII RALEIFGIGK
481 TDGERQQRML ELLDLVKLPR AFAERMPRQL SGGQKQRVGI ARAFAGGARI VVADEPVSAL
541 DVSVQAAVTD LLMEIQREQK TTLLFISHDL SIVRYLSDRV MVMYLGHVVE LGTTDQVFSP
601 PYHPYTEALL SAVPIADTSV IKEHIVLEGD IPSAMNPPPG CPFQTRCRWK SEVPGGLCDK
661 DVPPVRQLGD GHQVKCHLSD EVLARMGPVI KIAAE
SEQDB ID: 3101377FCH
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLTTFELI QQLLLRFLPV WACMAVILAG SITTRRKTGL YGQIFDSPVG IAGFSLVLFW
61 VLTAIFANQI ITHDPYGQFS GMKNAFPGSA IPGAEEDTFP WYLLGGDNLA RDVFSRLVSG
121 SRIVLTVSPV ATVFAFLVGI TLGLPAGYYG GRMDTALTFT ANLIIAFPVI LLFYLLVTPE
181 IRAGGPTISF GAGHVWQASV PNVLAAIIFV FPMIFFCLFW QSRFYVRPML RNVLIAITLG
241 VGVWAYLGTA FDYDPTGIFL IEPGLKNIFA IIAMVGAPAK FRIVRGQVLD IKTRDFVAAA
301 QTRGERSWYI MLWEILPNAR GPLIVDFCLR IGYTAILLGA LGFFGLGLTP ESPDWGTTIN
361 EGRKFLALYA HPALAPALAL MSLVLGLNLL GDTLREESLK D
SEQDB ID: 3101377FCJ
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAVAPSPPR PALIFGVAMR HFILRRLAVM LLTAACLTFV VFFLTNLMPN LEKLAKTEAN
61 ARMSDAEVLS WLTERGYTQD IFTKYGEWLG VVPSSRVNGG DGELYTRCAR PERTAEVAPH
121 YCGVLQGEFG FSTVFKEEVS TVIAKRLGTT GYLMLAVLCV MVPLSLLIGV LAGMREGSLA
181 DRLLSTFAII TTSTPEYVSA VLLISFFASK NAGISPVLVE WGMIEGPTLF KASAATAMKG
241 ITFANFTLPV LALTFYGMGY IARMTRASMT EVMTAQYIRT ARLKGASFRA IVLKHALRNA
301 MITPFTVIML QIPWLLTGVV IVETIFNYKG FGWALVQAAG NNDIELLMGI SVVAVIVVLL
361 TQLISDIGYV FLNPRIRVN
SEQDB ID: 3101377FCK
Reference:
3101377
Name: 2-peptide ABC transporter, Subunit: periplasmic dipeptide-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFNKRTDEL AGGSLPGHVL AAADHARSGS AMDRREFLAL ASVFGATAAT AYGMLGMAAP
61 AQAATPRRGG TLRLEVGVHA LKDTRTMDFA AMSMVASNWL EYLVEYNNDG TFKPRLLDSW
121 EVNADATEYT LKVRKGVTWN NGDAFTAQDV ARNIERWCDA EVEGNSMASR MNSLVDPETK
181 KAAAGAITVV DDETVKLTCR SSDITIIPGL ADYPALVVHE SYTPETMLTN PVGTGPYKPV
241 EFEVGVRAAV ERNTEHAWWG EGTGAWLDRI EFLDYGTDAS AVLSAVEADE IDVTYNTSGE
301 YLELIEALGW HTSEIATGST VVIRANQQAE VNGQKPYADV RVRKALQMAV DNNVVLELAF
361 NNNGKVAQNH HVAPVHPEYA DIGDPVHDPA GARALIEEAG MADFEHELIS IDGGFRKDTA
421 DVVAIQLRDA GIKVKRTIMP GSTFWNDWTK YPFSITDWNH RPLGVQLYGI CYRSGQKWNE
481 AGFANAEFDA LLDQAVAVAD PAKRSEITAK MEQIMIDEAV IIQPYWRSLF RQSREGVLNA
541 EPHISFLPQL YKWGWA
SEQDB ID: 3101377FCL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMSVRRNTDQ VIVIASYQAG VKARRLSGYR
SEQDB ID: 3101377FCM
Reference:
3101377
Name: short-chain oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVLITGGNR GIGRELAARY RAAGHGVTAT ARDDSCDVAL DVTDPAQHRA MAEQLAGRPV
61 DLLICNAGVY LDKGLTLDTY TAQIWADSFA ANVTGVFLTV QALLPNLRAA SGKIAIISSQ
121 MASHTRAPGG SYAYRASKAA ALNLGRNLAT DLAPEGIAVG IYHPGWVRTD MGGQGGDIDV
181 AEAATGLIDR FAALSPQTTG CFETWDGRAH AY
SEQDB ID: 3101377FCN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIQYSLKCSA GHSFDSWFQS AAAYEKLAVA GMVACSVCGV TQVEKAIMSP RVTSARSNKD
61 DRPLTAPASP AEQALAEIRR KIEANSDYVG RDFVAEARRM HLGETPERAI YGEARVEEAK
121 ALVEDGIPVA PLPFLPNRKA N
SEQDB ID: 3101377FCP
Reference:
3101377
Name: NUDIX domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNAKLDRKAI LQTAEALPRL QYGALCCRFD GDLPQVLLIT SRGTGRWILP KGWPIPALDG
61 AATAAREAWE EAGATGQVAP DSLGTYCYVK LLDKRREVPC KVEVFALCVT ALAEDYPEAG
121 QRRRQWVTPA EAAALVDEPG LQQLLIGLDP VALRGMCEPP GMARST
SEQDB ID: 3101377FCQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDIMIVAPV DAEAELEALA ARYRAAGGTG IRLLNALGGQ AEGLLDRLPH QVRAGLSDAT
61 ERALVLAMRA AQGSRVAVPA QSARNNMIWT TAMGAAGGMG GLPTALVELP ATTTVLLRAI
121 QDVAAEHGFD PAAENVQFDC IRVFAAAGPL ATDDGADLGF VSLRLTLTGG ALYKMISAVA
181 PRLATALGQK LAAQSVPVLG AVAGASVNYV YTRYYQQIAH VHFGLRRLAV DADIPHADLV
241 ARLTEKMALS ARV
SEQDB ID: 3101377FCR
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEVKPETPD DWWEVEALYD LCFAPGRTAL SSYRLRDDVP PVAGLSLVAR DSDGTLAGAI
61 RFWPVHVGDL DALLLGPVAV HPTHQGEGLG GFLIQEGLEA GREGGWARVM LVGDAPYYSR
121 FGFARLEGVE MPPPTNPDRV LGLELIPGAW TGVSGRVTRW TR
SEQDB ID: 3101377FCT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFYRPEDGHG LPHNPFNAII TPRPIGWIST RAADGTNNLA PYSFFNGAAY FPPQVMFSTT
61 GSKPDQDNTK DTVANIEATG VFCVNIVEYA MRDAMNATSQ TLPREVDEFA HAGLTPVECE
121 TIACARIAGA PAALECKLTQ IVTLPGESNR VVFGEVTGIH MRDECLKDGI FDVTTYQPLA
181 RLGYRDYSVV RDLFTLARPD D
SEQDB ID: 3101377FCU
Reference:
3101377
Name: streptogramin acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLPDASRRY PITLPDGTDH AGTVFLNRVI DHPRFRAGDY SYASDFDPPA DWAARLAPYL
61 FATSAEMLTL GRFCQIAHGV RFITASANHA MDGISCFPFP VFDPVQMASY QPDRRDTVIG
121 HDVWIGYGAM ILPGARIGNG AIIGAGAVVR GTVPAYAVVT GNPGQVIRFR FDPDTVATLQ
181 TLAWWDWPTD RIARAEPALL SGDIDHLARL SP
SEQDB ID: 3101377FCV
Reference:
3101377
Name: sulfate transporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRAFLASVA NRLAIPDLRW MPDEPLTASR LRIELLSGLT VALALVPEAV AFAFVAGVHP
61 LVGLYAAFLV GLITALIGGR PGMISGATGA LAVVMVALVA QHGVEYLFAT VVLMGLLQLV
121 AGVMQWGKFI RLVPHPVMLG FVNGLAIVIF LAQMGQFKVP GSMENTGHGL GGGQWLSGGP
181 LMLMLALVAL TMVVIWIMPR VTRAIPAPLA GIAVVAALVI GAGLEVPRVG DMASIEGGLP
241 QFHIPMVPLN WETLEIILPY SVILAAIGLI ESLLTLNLVG DITGKRGGAS QECIAQGAAN
301 VVTGFFGGMG GCAMIGQSMI NVKSGGRTRV AGIAAALFLL VFILVGAPLI EQIPLAALVG
361 VMFMVVIGTF AWNSLMILRK VPLTDAFVTV LVTVVTVMED LAVAVVVGVI VSALAYAWNN
421 AKRIHAVTRE SHTAKGAKVY EIQGPLFFGS TDGFVELFEV EKDPDTVIVD FKESRVVDQS
481 ALQAIEAVAL KYEDAGKQVM LRHLSRDCHQ LLNKAGHLMV DSDDDPDYGL AVDYSVRTGI
541 LGGH
SEQDB ID: 3101377FCW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSLIPLLLS ALIALPAHAQ DMQGNDTAGN WRVTHHRLIG IWDSMCDERV EQGQLVQRCY
61 LRHVDVFSPH PEFAAQYLFV TPEDTGFAVE IGIEPGTLFA PGGIRIERAG ERLWHSNWPG
121 CLTGLGCAFS EGSAETLIEA MRQGESFRFT FRDRHGKAQD RTWPLGQFEA AWQDFLDQSR
181 QRGLTGADAR QGG
SEQDB ID: 3101377FCX
Reference:
3101377
Name: methylthioadenosine phosphorylase, Class: EC2.4.2.28
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mtaP
Sequence:
1 MRNTKIAVIG GSGIYDIDGL DAAEWVTVET PWGAPSDQIL TGRLGGVDMA FLPRHGRGHV
61 HSPTEVPYRA NIDALKRLGV TDVISVSACG SFREAMAPGH FVIVDQFIDR TFAREKSFFG
121 TGCVAHVSVA HPTCPRLSDA CETSARAAGV TVHRGGTYLA MEGPQFSTLA ESKMYREHWG
181 SDVIGMTNMP EAKLAREAEL CYASVAMVTD YDSWHPDHGE VDVTRIIATL MGNADKGRAM
241 VKGLPALLGA ERAPCPHGCD RALEHAILTA PEARDPALLS RLDAVAGRVL
SEQDB ID: 3101377FCY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDPYLLARWL HILSSTVLFG TGIGTAFQMV WAMRTGKAET VHSVASGVAW ADWLFTTPAG
61 IAQPLTGLWL IHLAGYSLLE SWLLLTYGLY LLAFACWAPV VHLQIRIRDL AGAAQVTGAA
121 LPAEAHRLYR IWFALGWPAF VALIGIFWLM VWRPALW
SEQDB ID: 3101377FD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVLGGIGFT APWLLLALVA LPILWLILRA VPPAPIRRLF PAVSLLLGLR DDESVSDRTP
61 WWLLLLRVLA VAAVILGLAG PVLNPRQQAE GDQPLLMVME ASWAGAARWT QQIDLLEARL
121 TEAGRASRPV AVLRLGAPED LVFQSAAAWR SRLPGLSPMP WQPGAAELAA ATQAIAAQTG
181 GFDTLWLSDG LDYAGRAELL DTLGARGAVT VYQSPNPVLG LRPASFADGA VQLTLLRAEA
241 GEERIQPVLA LGPDPAGTVR VLNRSEARFA SGETEAQLAL ALPSELRARI TRFELEGQRA
301 AGAVALTDDS LARHEVALYA GRQDREGLEL LSPLHYLTQV LAPNSDFIDG ALLDVLPANP
361 DIVVLADVVT LATLERSALT EWVEQGGILV RFAGPRMAAS DIGRDNADPL LPVRLRSGGR
421 TVGGAMSWGE AKTLAPFGDT SPFYGLTIPD DVTVSTQVMA QPDPDLADRV IAALSDGTPL
481 VTRKALGLGQ VVLFHVTADA EWSSLPLSGL YVEMLDRLAV SSAAKSADAI NMEGTVWSPL
541 RVMDGFGQLD DAGNLPGIDG TALATAPIGP EMRPGVYAND SRRLARNVLG ADSVLTPATW
601 PASVPVLGLS IAAEQPLGGW LLSLALVLLA LDVAASLALS GRLGPLGRAA ALLALLLHAP
661 VAEAQLTEAD MFARDATREM VLAHVLTGNR AVDDLALAGL RGLSDTLFFR TSVEPAAPFS
721 VDLERDELAF FPLLYWPVTP DQPQPSDAAY ARLNTYLRLG GMILFDTRDA DIARFGASSP
781 NGRKLQQLAA PLDIPPLEPV PGDHVLTRTF YLLQDFPGRH ASADIWVEAA PLDAEQIEGM
841 PFRNLNDGVT PVVIGGNDWA AAWAVDDNGR AMLPVGRGYG GERQRELAYR FGVNLVMHVL
901 TGNYKSDQVH VPALLDRLGQ
SEQDB ID: 3101377FDA
Reference:
3101377
Name: transmembrane efflux protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRRLGQETP MPLDLWLAFV AASTALLLIP GPTVLLVLSY ALSKGRGVAV ASATGVALGD
61 LIAMSASLAG LGALVLASAT LFAVLKWVGA AYLLWLGYRL FRSAGGAGLA QMRVSQDVSA
121 RSVLAHTAAV TALNPKSIAF FIAFVPQFLR PEAPLLPQFA ILIATFVGLA ALNALAYALL
181 ADRLRRWVDR PSVIAGLTRT GGVTLMGMGL ATALLRRPA
SEQDB ID: 3101377FDB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFYALYIQCI CEIFNRADGF VGKKDGKNAA TKDAQLVLRL DKKERDAFVE TCKALDTSAA
61 REIRRFIREF MKAHQDS
SEQDB ID: 3101377FDC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVHPHRNNK TEAIAMNLHT AQSLLIQDRR DWVKPHLSWL PATLYRSFAS LKTRR
SEQDB ID: 3101377FDD
Reference:
3101377
Name: adenine phosphoribosyltransferase, Class: EC2.4.2.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: apt
Sequence:
1 MSRTKSVQDY IRTIVDFPHE GILFRDVTTL FADPRGFRIA IDQMLHPYAG ERIDKVVGLE
61 ARGFILGGAI AHQLSVGFVP IRKKGKLPGT TISQDYKLEY GEAIVEIHDD AIQPGEKILL
121 VDDLLATGGT AAAGIKLVER LGGEIVSCAF IIDLPDLGGR KVLESMGMDV HALCAFDGL
SEQDB ID: 3101377FDE
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLHPADESF ANHLRSLLPA EVLRPVEPRY LSEPRGRWTG QAGVLALPRS TEEVARLIRA
61 AGTKRVPVLP YGGGTGLVGG QVMPEGPAPL LISLERMNRI RGIYPQENVV VAEAGCILAD
121 VQSAAGDAGR LFPLSLASEG SCRIGGNLAT NAGGVGVLRY GNARDLCLGL EAVLPNGEIW
181 SGLTRLRKDN TGYDLRNLLI GSEGTLGIIT AAALKLFPQP GSQGTALLTV RDPQAALDLL
241 ALARGQVGEG VSAFELIHRQ SFDFLAETLP HLRQPLDPVP EWSVLVELGL SGGLDAVTAL
301 EALFEAAVEA ELVIDGVVAQ SEAQRGALWS LREHIPEANR RIGSISSHDV SLPLSELPAF
361 IQRGQEAVSA MGPFRINCFG HLGDGNLHYN LFPPKGRDRS DYAVQATELK RLVHDLVHDF
421 GGSVSAEHGI GRFKTGDLQR YGDPAKLAAM RAIKTALDPA GIMNPGAVLA
SEQDB ID: 3101377FDF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPACATIGV MWRLLLALTV LAGSASAQER RPSHCIAIAD AAPGIAYLHK AGWQDPVPDY
61 SVRISYIAHA SFLIQTPGGL NAVTDFTGFI GSADLIPDVV TMNHAHETHW TQFPDPAIPH
121 VLQGWGPFGK GIEHHLDLGE MLIRNVSTDI RSVYGGVEER GNSIFVFEVE GMCIGHLGHL
181 HHVPDDAQFA ALGRLDVVMA AVDGGTTMPL PEMIAVLRRL KSSVIIPMHW FSGHSLDRFL
241 AGVRNDFDIR RDGVSEIDIS LRTLPDRPTV VVLEQRYLVD LD
SEQDB ID: 3101377FDG
Reference:
3101377
Name: ribosomal protein-Ala acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLGRRKLKL ETERLSLRLP AHSDYADWAA LRRASRDYLV PWEPSWAHDH LSRKSFTNRV
61 YWAQRSVASG SAVPLFLFRR SDDVLVGAIT LDNIRRGPAQ AGTLGYWTGQ NHARQGYMRE
121 AIGAVVHHAF AQLDLSRLEA ACLPENMASR GLLESSGFKY EGVAQSYLQI NGRWRTHVLY
181 ACLRSDRRGK TDVG
SEQDB ID: 3101377FDH
Reference:
3101377
Name: peptidase, Isotype: M16 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVRQDQLAN GFRIVSENMP GLQSAAIGIW VTAGGRHERI DQNGIAHFLE HMAFKGTERR
61 SALQIAEAIE DVGGYINAYT SREVTAYYAR VLKEDVALAL DVIGDIVLNP VFDPREIEVE
121 RGVILQEIGQ AHDTPDDVIF DWLQEESYRD QPLGRTILGP VERVSAFSRA DLSAFVADNY
181 GPEQMILSAT GAVDHDLLVR LAEEMFGHLT PRKGALAVPA LFTGGEARRE KALEQAHFAL
241 ALEGPGYRDD AIYTAQIYSS ALGGGMSSRL FQEVREVRGL CYTIFAQTGA YADTGTTTIY
301 AGTSAGQVAE LAGITIDEMK RAAEDMSEAE VARARAQMKA GMLMGLESPS NRAERLARLV
361 QIWGKVPSLE DTVARIDAVT TADVRAFAEQ MAVEAPAALA LYGPVSAAPN LAELQERRAA
SEQDB ID: 3101377FDJ
Reference:
3101377
Name: Thr synthase, Class: EC4.2.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: thrC
Sequence:
1 MKYISTRGQA PELTFEEAML TGLARDGGLY LPAEIPVMGQ DEIAALAGLP YEEIAFRVMW
61 PYVSGSFGED EFRGIIARAY QGFGHAARAP LKQLNENHFL LELFHGPTLA FKDFAMQLIG
121 QLFQAALARR GETVTIVGAT SGDTGSAAIE AFRGLDAVNV FILFPHGRVS EVQRRQMTTP
181 ADSNVHALAV DGDFDDCQAR VKDMFNDFAF RDGVRLAGVN SINFARVLAQ VVYYFSAATS
241 LGAPHRKVSF TVPTGNFGDI FAGYIAKRMG LPIEQLVVAT NQNDILHRCL SGEGYFKGET
301 IPSISPSMDI QVSSNFERAL YYAYGQDGAA VSQLMDELQQ GGFHVSQGAM QALRDSFTSG
361 RASEEETLAT IKATLAASGE LLCPHSAVGV KVAEEARRAD EAPMITLATA HPAKFPAAVE
421 QASGVFPPLP PRMSDLYERP ERVTRIANDL AALQDHIRRH IPA
SEQDB ID: 3101377FDK
Reference:
3101377
Name: SURF1 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRVLFLLFI GLAGLAVLIA LGSWQLRRLS WKEALLADID SRIADAPQAL PEHPDPERDR
61 YLPVAVSGEI EGEELHVLVS VKMVGPGYRV IAPFVTDEGR RILVDRGFIP TTAKQDSRET
121 GPMRVEGNLH WPDEIDGYTP SPDLNGNIWF ARDVPAMAAR LGTEPVLLIA RAPTGPGITP
181 LPVDSAGIPN THLQYAITWF GLALVWAAMT SLFLWRGRAR KKG
SEQDB ID: 3101377FDL
Reference:
3101377
Name: cytochrome c oxidase, Subunit: III, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ctaE
Sequence:
1 MAHAKNHDYH ILAPSIWPLI GSIGGFVMLF GAVLWMHGIT PYMFWAGFIA VLYVMYAWWA
61 EVVAESRVGD HTPVVRIGLR YGMILFITSE VMFFFAWFWS FFKHRMYPMQ EYVGTEYVAP
121 SIHAVDPFHL PLINTLVLLL SGCAVTWAHH ALVHNNDRKA LIQGLSIGIF LGMIFTLLQA
181 YEYAELLLHE DWTFGGDQFY SNFFMATGFH GMHVIIGTIF LAVCLLRALK GDFTPEKHIG
241 FEAAAWYWHF VDVVWLFLFF AVYIWGQWPL L
SEQDB ID: 3101377FDM
Reference:
3101377
Name: cytochrome c oxidase assembly protein, Isotype: CtaG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ctaG
Sequence:
1 MALNGPQKTV VQLVSVVVVM GGLAWASVPF YDWFCRVTGF GGATGVAEAG SDTILDKTIK
61 VRFDASKERG MPWEFRPVQT EMELRIGETG LAFYEAYNPT DRPVAGQASY NVAPYSAGGY
121 FDKIACFCFE EQVLQPGERV QMPVTFFVDP EIVNDRDAKY VHTITLSYTF YEIDLPEGYA
181 ALDAGEKTNT N
SEQDB ID: 3101377FDN
Reference:
3101377
Name: protoheme IX farnesyltransferase, Class: EC2.5.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cyoE
Sequence:
1 MSDASFNAST ARAAHRPDEA GFGDYFALLK PRVMSLVVFT ALVGLVAAPV SVHPFIGFCA
61 ILFIAIGGGA SGALNMWWDA DIDQVMKRTK KRPIPAGKVE PGEALALGLG LSGLSVMMLA
121 LATNVLAGAF LAFTIFFYVV VYTMWLKRTT PQNIVIGGAA GAFPPVIGWI AATGDMSVEP
181 WLMFALTFMW TPPHFWALAL FMRSDYDDAG VPMLTVTHGR RATRVHILIY TILLALLALG
241 TAFSNIGGPI YLAVALVLNA LFLLGAIRIW RRDEADSEAD NFKTERGFFK LSLLYLFLHF
301 GAILAEALLR PYGLGGWG
SEQDB ID: 3101377FDP
Reference:
3101377
Name: cytochrome c oxidase, Subunit: II, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ctaC
Sequence:
1 MKNALTLSAL LAALSSLPAA AQELEIIGKP VDGGMGFQPA ATELARDLQW LDGMILVIIT
61 AICLLVAALL VWCIVRFNSR ANPTPAKFSH YTPVEILWTV GPIVILLFIG SYSLKELFDQ
121 QEIPEGEINI KVTGYQWYWG YDYTDEGFGF ESFMLGRDAL EEHGYSQDEY LLATDTAVVV
181 PVGKVVVMNV TGADVIHSWT IPAFGVKQDA VPGRLAQLWF KAEKEGIYFG QCSELCGKDH
241 AYMPITVKVV SEAEYAKWLA SAKEEYAGLP TSYQVASN
SEQDB ID: 3101377FDQ
Reference:
3101377
Name: TldD/PmbA family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQDPFRPFE TALPQDEALA VLRAATDGAE DGELFVERRK SEALSFDDGR LRSASYDASE
61 GFGLRAVKGE VAGYAHSTDV SIPSLRRAAE TARLAVGDGG GTLAGAPART NRKLYTEDDP
121 IDSAAFPVKV ETLREIDAFA RDLDSRVVQV SASIMASLQE VEILRPDGVH LRDVRPMTRV
181 NVSVIVERDG RRESGSAGGG GRVGLDGLIA PEAWQAQARE ALRIALVNLD AEPAPAGVME
241 VALGPGWPGI LLHEAIGHGL EGDFNRKGTS AFAGLMGQQV AARGVTVVDD GTLPDRRGSI
301 TVDDEGTPSR RTVLIEDGIL TGYMQDRQNA RLMGVEPTGN GRRQSYAHKP MPRMTNTVML
361 GGNADPADLV AEIKDGIWAV GFGGGQVDIT NGKFVFSCTE AYRVRNGRIG APVKGATLIG
421 DGPSALQRIR GLGNDMALDP GMGTCGKDGQ WVPVGVGQPT VLMDGLTVGG SAA
SEQDB ID: 3101377FDR
Reference:
3101377
Name: DNA processing protein, Isotype: DprA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEEQFSSYH PPLPPTTEED RFSWLRLLRS RRVGPTTFRR LMHEHGTAQN ALAALPEVAR
61 AAGVEGYEIC PPGVVEAELK AAKAAKARLL CLGDADYPSH LAGISDAPPL LWLLGDPALL
121 RRPMIALVGA RNASSLGTRM ARALAQDLGT AGFVVVSGLA RGIDTAAHLA ALPSGTIAVM
181 AGGVDTVYPA ENTHLAADIA QHGLRLSEQP MRLTPQARHF PRRNRIISGL AQAVVVVEAA
241 AKSGSLITAR DALDQGREVL AVPGHPFDAR AAGCNMLIRD GAHLVRNAED VITALPALTA
301 PQPQPDLCDL MQQPAPPAKR SLRETVALHS LILDRLGPSP VAEDQLIRDL AASPGEVAPV
361 LVDLELEGRI NRQAGGLLSR VN
SEQDB ID: 3101377FDT
Reference:
3101377
Name: DNA topoisomerase, Isotype: I, Class: EC5.99.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: topA
Sequence:
1 MPVVVVESPA KAKTINKYLG SDYTVLASYG HVRDLPAKDG SVDPEHDFDM TWEVAADSRK
61 HVKAIADALA EDNELILATD PDREGEAISW HLQEALTKRR SIKKGTAVSR VTFNAITKDA
121 VTKAMQNPRQ VDMPLVEAYL ARRALDYLVG FNLSPVLWRK LPGARSAGRV QSVCLRLIVE
181 REMEIEAFKP VEYWSVKALL ETPRGQVYEA RLVTLAGNKL DKMDISNATQ AELAVQAITS
241 RALSIQSVEA KPAARNPSAP FMTSTLQQEA SRKFGMGARH CMSAAQRLYE AGHITYMRTD
301 GIDMAPEAVM ATRDAIADRF GAEYVPDSPR MYKNKAKNAQ EAHECIRPTD MRKDAAALKL
361 KDEDQRRLYD LIWKRTIACQ MAAARLERTT VEIGSADGQV GLRATGQVVL FDGFLRVYEE
421 GRDDVENDED KRLPQISMGE KAVFAKTSLA DQFARATGDT PLTEGAKIAK EAILSENEAV
481 LALQHHTQPP PRYTEATLVK RMEELGIGRP STYASVITTI QDREYVRKDK NRLIPEEKGR
541 IVTIFLLNFF RQYVGYEFTA NLEEQLDDVS AGSRDYKDLL GRFWRDFSAA ISETSELRIS
601 EVLDKLDEAL APQLYPPRED GSDPRICPKC GTGQLHLKTS RTGGFVGCGN YPECRYTRPI
661 SGDADDSAER LLGEDGGDEI WLKAGRFGPY VQRGEISEEN KKPPRASLPR GWSAEDLDLE
721 KALVLLSLPR QIGQHPEGGM ISSNFGRFGP YLMHQLPDEA KPIYANLKDP SDVFEIGMNR
781 AVELLAEKRA NPRGRGRAAA KPLKELGEHP EHGGAVNVLD GRYGAYIKWD KVNATLPKDV
841 EAADVTMEMA VALIAEKSTK KGTKKKAAPR KKTTKKAAEE
SEQDB ID: 3101377FDU
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQEKNAPVPN ADRRAAMRAR LIAAARALFV DKGYAETSTP EIVRAAEVTR GALYHHFADK
61 ADLFRAVVEA EAEALVSRID AEAVDAGAGG MEAGSAAFFR AMAEPGRARL LLIDGPAVLG
121 PDEMSRIDAG GGRASLRAGL DLVVSGVGEA EMQALTEVVS AAFDRAALAI AQGAEPAPFE
181 QAMARLVAGL GER
SEQDB ID: 3101377FDV
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTTQYYPVI QTGDVQGTAD FYRSHFGFHT AFEADWYVHL QSSADPSVNL AILDGQHETI
61 PAQARGPVRG VILNFEVADA AAEYDRLTAA GLPMLKPLKD EAFGQRHFIT ADPNGVLIDV
121 ITPIPPSAEF AAQYSAEALP Q
SEQDB ID: 3101377FDW
Reference:
3101377
Name: 3-oxoadipate CoA-succinyltransferase, Subunit: alpha, Class: EC2.8.3.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dxnG
Sequence:
1 MKKVYANATE ALDGLLQDGM LIAAGGFGLC GIPELLLQAI KESGAKDLTF ASNNAGVDDF
61 GIGILLQTKQ VKKMISSYVG ENAEFMRQYL SGELELEFNP QGTLAERMRA GGAGIPGFYT
121 KTGVGTVIAD GKEHKEFNGE TYILEEGIFA DLSIIKAWKA DDTGNLVFRK TARNFNVPAA
181 TCGKICIAEV EEIVPRGELD PDCIHLPGIY VHRIIQGEHE KRIEQRTTRK REEA
SEQDB ID: 3101377FDX
Reference:
3101377
Name: 3-oxoadipate CoA-succinyltransferase, Subunit: beta, Class: EC2.8.3.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dxnH
Sequence:
1 MPWDRNQMAA RAAEELEDGM YVNLGIGIPT LVANYVGDKD ITLQSENGML GMGPFPYEGD
61 EDPDLINAGK QTITELARTA YFDSATSFAM IRGGKIAAAI LGAMEVDEKG DLANWMIPGK
121 LVKGMGGAMD LVAGVGRVVV VMDHTNKHGE SKVLKECTLP LTGKGVVDRI ITNLGVLDVV
181 EGGLKIVELA DGVSEAEMRA ATEATLVN
SEQDB ID: 3101377FDY
Reference:
3101377
Name: transglycosylase, Isotype: slt family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKSPHFGWF FSVEGGFCTV ESGKNISRGE QMVLRYITLI ASAAVFAAVA ESRAESPAPL
61 PEVKFKRVRA PVPGARPRVD VQISAEEHAR APVAGRQKPI EAEEVVTAAA APLPDAAAPT
121 GRYAWFWDKI SPALGPDRPR QLEDMLSALS AGGVDAPRLQ ALQDIARAQG ISILRSTVGT
181 EVSPALVLAV IAVESAGRAD AVSGAGAQGL MQLMPATAAR FGVADSLSPD ENIAGGVRYL
241 NWLMEEFGRD PVLVLAGYNA GEGAVRKHEG VPPYAETRDY VPKVLAAYQV ARGLCTTPPE
301 LITDGCVFTA MQ
SEQDB ID: 3101377FE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAAPALRHR AETAAAPLPP LLARAEYLAG TVLLGDHGRR RAGLGDDFWQ YRPAQPGDSR
61 RMIDHRRSAR GDLQYVRERE WQIAQSVMLW VDQGASMRFS SDKRLEAKAD RARLLALAVA
121 ILLVRGGERV GLTGTTLPPR RGNAQVHRLA EAWSRDAEAD YAPPEHRAMI PHARALFVSD
181 FLGDLKEVEL ALSKAADRGV RGVLMQVLDP AEESFPYRGR TLFESVGGTL RHETLKAGEL
241 RERYLVRLAE RRDALMALTR ATGWQLGLHH TGDSAQSALL WLWRALDGRV R
SEQDB ID: 3101377FEA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKFIKNFRK DEDGAVTVDW VVLTAAVVAL AAVAYNGIST GTGTLSTAIN TELGTVTPDT
61 GL
SEQDB ID: 3101377FEB
Reference:
3101377
Name: CpaB-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARMADAGQP ERKRGDKMRA VFGLVLIVGI ALAGGAVMMA RNYISAYQNE LARERQARAQ
61 IVPTKTVYVA SRPLRYGERL TKEDVRAVNW PENAIPEGTF LDAAMLFPER QEENRYVLRA
121 MEKDEAIMAI KVTKPGEDAG LTSQLARGMR AFAIKVDVTS GVSGFLRPGD RVDVYWTGGL
181 SGATGPLEGM QGEITRLIQT NIQIVAIDQI SGGDVTGANI ARTVTVAALP QQVASLAQAQ
241 TTGRLTLALV GADDDTIAAA VEVDQRMLLG LGALEAAPEK AEEKVCTIRT RRGAEVVDIP
301 IPCTN
SEQDB ID: 3101377FEC
Reference:
3101377
Name: II/III secretion system protein, Isotype: bacterial type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGKAGHMKI DGLIKAALTG LALACSPMTG LAQAQDLRVV KQGAAETLDV PMNRAIVVES
61 ETPFAELSIA NAGIADISSL SDRTIYVLGK SPGLTTLSLF DAGGRLITNV NVRVSFDVAE
121 FKERLKQILP NEKIEVRTAN DGIVLSGTAS STARLQRALD LAERYAPERV SNLMSVAGVQ
181 QVMLKVRFAE MQRSVSKSLS ASLGVSGGNI VGGLNTLNSS GSLTNAIGGS IPALNDNAGA
241 ILFGFSAGST QVRLLLEALE RKGVVRTLAE PNLSALSGQE AKFLAGGEYP IPVAQRDGLF
301 TVEYKPFGVE MAFIPRVVDG DLINLELLAA VSSLDPNNSV TVNGFDIAAF QRRETSTTVE
361 LKDGESFAIA GLIEDEFLDN NQQLPWLGDV PVLGALFRSA NYQRSQTELV IIITAHLVSP
421 TRGEALALPT DRVKPPSEAD LFLRGKTART ERARGGAASE VARQDFSGSY GYVLE
SEQDB ID: 3101377FED
Reference:
3101377
Name: OmpA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGPMRNWMMC LGLAGTLSAC GIEAGYQVDS GTFGNATLNN TQMMNGERSY TQVLADRFAR
61 EIPTQINFAF DSAELDATAQ QVLTLQADWI RQFPEVRFRV YGHTDAVGSS GYNKSLGMRR
121 ARAVVSFFAS RGISRSRLEA VVSYGETQPL VPTGERERRN RRTVTQVSGF VDGNQNLLDG
181 KYAQVVYREY IKSAEPKTTV EIDTSSSAFE Q
SEQDB ID: 3101377FEE
Reference:
3101377
Name: ATPase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTCDQIPGRM RVKAERTPFR CPTPVKRKKA MSSAMPQPET TPILACTVSR DVQNFDLLIE
61 DMEAAMGESW GDLGFAEALA FFGQPESESL EFIALAIDTE DEDNLVLMGE IITQAKSRGI
121 KVILIAEDVT PASLHQLLRK GADEFVPYPL PERELQSAID RMSKPEPEQA QTHHNTAHLN
181 KGAAREGALI VVHGLAGGTG STTMAVNLAW ELANIGGEDA PSVCLMDLDL QHGSVSTYLD
241 LPRREAVFEM LSETQSMDEE VFGQALLSFE DKLQVLTAPS DMVPLDILSP EDIQRVIEMA
301 RAHFDYVIVD MPKTLVQWSE TILQAAHVYF AMIELDMRSA QNALRMKRAL QSEDLPFNKL
361 RFALNKAPKF TDLSGKSRVK RMGESLGISI DLQLPDGGKQ VTQGADHGLP LATSAPKNPL
421 RREIAKLAQS LHELGRSDAK AA
SEQDB ID: 3101377FEF
Reference:
3101377
Name: type II/IV secretion system protein, Isotype: TadA-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSRYKKTDK AMPVAAMAAK KAETPAAAVE PVASASLRRP AQKQAAEVVP QDRDRKRKER
61 LSELKIELHR DLLENLNLSA LEHAAEAELR AEITAITSEV LETKGVVLNR EDRMQLNKEL
121 YDEVTGLGPL ETLLQDDTVN DILVNGPQQI FVERAGKLQL TDITFKDERH LLRIIDKIVS
181 AVGRRVDESN PYVDARLADG SRFNAMVPPI AVDGSLVSIR KFKKDKLGID DLVKFGAFTE
241 EMAAYLQAAV ATRLNVIVSG GTGSGKTTTL NALSSFIDNA ERILTIEDTA ELQLQQVHVG
301 RMESRPPNVE GKGEVSPRDC LKNALRMRPD RIIVGETRGE EVIDMLQAMN TGHDGSMTTI
361 HANSARDGVS RLENMIAMAG IEMPIKAVRS QIASAVNLIV QASRLQDGSR RMTSITEITG
421 MEGDVISMQE IFRYQRVGLT PDNKIIGHFT ATGVRSHFSE RFRMWGYDLP PSIYEPTTM
SEQDB ID: 3101377FEG
Reference:
3101377
Name: type II/IV secretion system protein, Isotype: TadC-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLSAEPIIY GLIFVGVLVL VEGLYLVAFG KSISLNSRVN RRLEMLDKGT GREQVLEQLR
61 KEMQQHMKSK SIPLYSLLAE KAQKAAIAFT PRQLIMIMFL LAGIAFVGLS IGTQTEVKLR
121 AAISVAIGIA AVYLWVNQKA KKRLSLIEEQ LPDSVELMVR SLRVGHPLVS AIQIVAKESE
181 DPIATEFGII ADEAAYGREV GEALKEMAER LDMQDLRFLS VAVTIQQQSG GNLAEVLAGL
241 AKVIRARFRL FRRVKAITAE AQWSGKFLSA FPLGALLFIL VKDPNYYDGV MDHELFIPAC
301 FVVGVMLTMN LFVMRMLTNI KV
SEQDB ID: 3101377FEH
Reference:
3101377
Name: type II/IV secretion system protein, Isotype: TadC-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEFLNQINDF LTGHLGEFGP LIAVGVLGLF MVLLAVPLLM SQPEDPLKKL KREMNPNTLA
61 KPKKEQLRQS GRNEQLQRFA NFLEPQDADE LSAMQLKLRQ AGYQSKDAVR FFHFAQMALG
121 LVGLVLGVLY VFVIEADKDL DGQAMLIRVL GPGGAAYFLP RYWITRRVDT RKENITRAFP
181 DALDMLLVCV EAGQSLDQSI VRVSKELRAS YPDLADEFEM VAYEMKAGKE KDKVLRDMGT
241 RCGVVDVSSF VTVMIQSSQF GTSIAEALRV YAGEMRDKRV MRAEEAANKL PTKMTLATMM
301 LTVPPLLIIL VGPSAKGIMD LGNMSN
SEQDB ID: 3101377FEJ
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSSAAPVRR PSLVLAWATV TAVTVASCTK SDDIALPDNP FPPGVDHRKQ AVSGVEVGQR
61 LMSAGEYELA LDAFTRAALD EGMTTEILTG LGTANLGLGR LGQSETMLRR AVEEAPDWPE
121 AWNNLGVLLM EKDEIAEATA VFRKAYALDN GESDSIRNNL RIALAKSENP VINTVQKEEF
181 KLVQRGQGDF LIRKTP
SEQDB ID: 3101377FEK
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHFILIPVM LAGGLTLSAC SDKADETVER AFQDVNVVDE TNLNDVMLTV ADPNEAVDYF
61 QRASKDNPER VDLQRGLAKS LTRAHRNTEA VSAWNRVIGM KGATADDSVD LADALIRNND
121 WERAEQVLDS VPPTHESFKR YRLEAMVADS NKEWKNADTF YEIAVGLTTR PAGVMNNWGY
181 SKLTRGDYAE AERLFGDAIR QDGNLFTAKN NLVLARSAQR NYTLPVVPMT QIERAQLLHT
241 MALSAVKQGD VTTGKALLRE AIDTHPQHFE DAVRSLRALE TG
SEQDB ID: 3101377FEL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALPAYAALW FLPFALPICL YVAYTDLAEL KIRNHAVMAL AGVFLAVGLI AYPPFTGEWA
61 SGRIGPVPMA LPTYVWQLLH LPLILLVGIV LNAAGAMGAG DAKFLAAAAP FVWTADLILA
121 MAILAASLLG AFTTHRIAKH SGLRRFAPNW KSWDSGKKFP MGLALGLWLV TYLALGAARG
181 S
SEQDB ID: 3101377FEM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMPHCSITIR AKRDTRRHVT RTTAGTPMNM QPTAVIAPPA PKGIAEMQLP VVMMRDILLK
61 TVFRKNVETA REVAEAICLP LSVTQELIDM ARTQKLLEAT GTLNANSGTE MGYQLTDAGK
121 SRALDALSQS EYFGAMPVPL EVYREQVKRQ SIRNIQVTRD QLVKAMGHLV LPDSLLGHLG
181 PAVSAGRSIL MYGPPGNGKS SISNGIRDAL GDNVYVPRAI EYSGQVITVF DPIVHTAVEQ
241 EPDDPTQLRR RARFDSRYVM CERPTVITGG ELSLSMLDLV YNPTARTYQA PLQLKSTGGI
301 FIIDDLGRQA EPPQAIINRW IVPLEEGKDI LGLQSGEKFE VPFDTLVIFS TNFHPNEIFD
361 QAALRRIFFK IKIDGPNQEN FLKIFAMVAR KKGVPLDEKA LVHLLKVKYP TIDNIYANYQ
421 PVFLIDQMIA ICEFEGIPYQ MSPDLIDRAW ANMFVRDEKI VK
SEQDB ID: 3101377FEN
Reference:
3101377
Name: 3-hydroxyisobutyrate dehydrogenase, Class: EC1.1.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mmsB-2
Sequence:
1 MIGVAGCGRM GAPMLAALRR AGFQAQGFDI RPSSDFPGTD HGITDGVAVF SQNLCTLITV
61 VRDISQTEQV LFTDQKLIHA KHLDCVIICS TLSPRYVRDL RARVPDHIAL IDAPMSGAQI
121 AAQEARLSFM LGGEPADLDA AQPLFAAMGS HFHRMGPYGS GMQAKVLNNL LAAANTAMTR
181 LVLDWADAAG LDEVALLRLI HTSSGQNWFA SNFDQIEFAR DGLSEDNTIG ILVKDVESAL
241 DAAPPGTDTT LPRSVQAAIR SLRPRPSSV
SEQDB ID: 3101377FEP
Reference:
3101377
Name: ATP-dependent helicase, Isotype: DEAD/DEAH box family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPQLPALLTD WFTAKGWSVH PHQQAMFDRA DRPATLLIAP TGGGKTMAGF LPTLAELAEG
61 QHQGLHTLYV SPLKALAADI KRNLRTPVDE IGLAVRIEDR TGDTSATQKK RQRADPPHIL
121 LTTPESLALL TSYEDAPRMF AGLRRVVVDE IHALAESKRG DQLMLALARL QTLCPDLRRV
181 GLSATVEDPQ AIARFLARHP DPCEILLADP GPDPDIAMLE TEEMPPWSGG GAAYAIPAVL
241 EQIRRHKTTL IFHNTRAQAE IFFHNLWLAN DEGLPIGIHH GSLDRAQRER VEAAMVRGEL
301 RAIVCTGSLD LGIDWGDVDL VIQIGAPKNV KRLVQRIGRA NHRYNAPSKA LLVPANRFEV
361 VECIAALEAV RAHALDGDPR GPGPRDVLCQ HILIAACSGP FDADALFAEM TSAGPYADLA
421 RSEFDACLDF CATGGYALRA YDRWQRLQQR PDGQWQLRDP RSAQRIRQNI GTIQDTDTLK
481 VRLRRNRGGK PLGEVEEGFA ASLTPGDTFL IGGQIVRYEG LREMVVEVSR RADKKPKIAT
541 FMGTKFATST QLSARILDLF AQDHWPQLPR HTAEWLALQR QVSRLPERGR LLVESFPQDG
601 REHLCVYGFA GRNAMQTLGL LLTKRMEETG LNPLGFVATD YAVLIWGLEA TTDPVPLFEI
661 DSLRAGLDQW LAGNAVMKRT FRASATIAGL IERNLGGQRK TGRQATFSSD ILYDTLLKYD
721 PDHLMMQITR AEAMRGLVDF GRIEEMIARV GTRIDLIRLD RVTPLAAPLF LEVGRVPVQG
781 AAEERLLAEE SARLLADAGL TA
SEQDB ID: 3101377FEQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGYDFTFAG ARLTALGSGA LWWRERRLLC VSDLHLGKSE RIARRGGTPL PPYEVADTLD
61 RLSADLERTA PETVICLGDS FDDAEAARAL PEPARLRIAT LQAGLRWVWI EGNHDPGPVN
121 IGGTHLRELT LGPLLFRHIA QDGAEGEISG HYHPKAALRL RGRSLSRPAF LLDQDRIVMP
181 AYGTYTGGLR SDAPVLARLM RPGALAIVTG PSPVAVPMPR
SEQDB ID: 3101377FER
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIATLRSYLS ADKRGLVGPA FLFLSLLASI SDPFGGYGMT FLRRFLFWVL VLGVAGGIAF
61 LSHRMVERHL SGAPLLGKDL LIVLLVTLSF TPSLWVLIFL FAAPSTGTAP DMWSMARYGT
121 IFASGLIVLR RGVFGQSVPE EESLQPRIYK RLPEGFSEQI LRLTVRDHSV DVVTDKGVHT
181 IRSRFGDAID EMVPISGHCT HRSHWVTDTA IESVERSGGK IHLRLSNGDL IPVSRKYRPA
241 LEEAGIV
SEQDB ID: 3101377FET
Reference:
3101377
Name: folD bifunctional protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAATVIDGKA FAARIRGQVA EHVAELKAGH GITPGLAVVL VGEDPASQVY VRSKGKQTVE
61 VGMNSYEHKL DADTSEADLL ALIDRLNGDP DVHGILVQLP LPGHLDEDLV INAIDPAKDV
121 DGFHISNVGL LGTGQKSMVP CTPLGCLMML RDHHGSLSGM DAVVIGRSNI VGKPMAQLLL
181 GDSCTVTIAH SRTKDLADVV RRADIVVAAV GRPEMVPGDW IKPGATVIDV GINRIERDGK
241 TRLVGDVHYD SCAQVAGAIT PVPGGVGPMT IACLLANTLT ACTRANKLTE PDGLTP
SEQDB ID: 3101377FEU
Reference:
3101377
Name: chorismate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTSIPPQDC TDMTSLRAQI DRLDRELISL LAARAGYIDR AVELKQGNGW PARIPERVEE
61 VVMNARAAAE GQGLDPGLIE DLWRQLVDWS IAREARVIRE V
SEQDB ID: 3101377FEV
Reference:
3101377
Name: formate-tetrahydrofolate ligase, Class: EC6.3.4.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fhs-2
Sequence:
1 MAYKSDIEIA REARKLPILE IGAKLGIAAD ELLPYGHDKA KVSQGFIDSV QDRADGRLIL
61 VTAINPTPAG EGKTTTTVGL GDGLNRIGKN AMICIREASL GPNFGMKGGA AGGGYAQIVP
121 MEEMNLHFTG DFHAITSAHS LLSAMIDNHI YWGNEADIDT RRVVWRRVVD MNDRALRQIT
181 CSLGGVSNGF PREAGFDITV ASEVMAILCL ARDLKDLEKR LGDIIVAYRR DKSPVYCRDI
241 KAEGAMTVLL KDAMQPNLVQ TLENNPAFVH GGPFANIAHG CNSVIATKTA LKVADYVVTE
301 AGFGADLGAE KFMNIKCRKA GIAPSAVVLV ATVRAMKMNG GVAKGDLGAE NVAAVNKGCA
361 NLGRHIENVK SFGVPVVVAI NHFVTDTDAE VQAVRDYCAN HGVEAVLSRH WELGSEGSEA
421 LARKVVELAE SGKANFAPIY PDDMSLFEKI ETIAKRIYRA DEVLADAKIR NQLKEWEEAG
481 YRNLPVCMAK TQYSFTTDPN RRGAPTGHSV PVREVRLSAG AGFIVVVCGE IMTMPGLPRK
541 PAAETIRLND AGQIEGLF
SEQDB ID: 3101377FEW
Reference:
3101377
Name: MOSC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMPVLEKSGH IGRVEWLGRV PAGGSLRAEP VDMLDLGFAG VTGERHEGVT RPSCVRVRNL
61 YDRDTEIRNA RQLTVLSAEE MAAIAAEMGL DRLDPAWLGA SIVISGIPDF THVPPSSRLQ
121 SGDGTTLTID MENRPCVFPG REVEADKPGH GAAFKPAAKD RRGVTAWVER PGALRLGDEL
181 TLFIPDQRPW AP
SEQDB ID: 3101377FEX
Reference:
3101377
Name: ATP-dependent metalloprotease, Isotype: FtsH, Class: EC3.4.24.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ftsH
Sequence:
1 MSLGNARNIA FWVVLFLLIL ALFNLFSGSG GTLQSQEKTY SEFVSAVDEG NVTKVILDGE
61 QIRYRTSDGR DFVTIKPGDA EVTTLLIDKN IPVRAEKQQQ SGFQSFIITL LPFLLLIGVW
121 VYFMNRMQGG GRGGAMGFGK SKAKMLTEKH GRVTFDDVAG IDEAKEELEE IVEFLRNPQK
181 FSRLGGKIPK GALLVGPPGT GKTLLARAIA GEAGVPFFTI SGSDFVEMFV GVGASRVRDM
241 FEQAKKNAPC IVFIDEIDAV GRHRGAGYGG GNDEREQTLN QLLVEMDGFE ANEGVIILAA
301 TNRKDVLDPA LLRPGRFDRN VTVGNPDIKG REKILGVHAR KTPLGPDVDL RIIARGTPGF
361 SGADLANLVN EAALMAARVG RRFVTMEDFE NAKDKVMMGA ERRSMVLTQD QKEKTAYHEA
421 GHAVVGLALP MCDPVYKATI IPRGGALGMV VSLPEMDRLN WHRDECQQKL AMTMAGKAAE
481 ILKYGEDHVS NGPAGDIQQA SQLARAMVMR WGMSDKVGNI DYAEAHEGYS GNTAGFSVSA
541 HTKELIEEEV KRFIQQGYDQ AHAILTERRE DWDRLAQGLL EYETLTGEEI KRVMKGEPPH
601 AGDDEDQGTD QGNAASVTAI PKTKPKAPPA GGMEPEPTA
SEQDB ID: 3101377FEY
Reference:
3101377
Name: PP-loop family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLTIGAQDL VNHLRAQFSA QPPRRLGVAV SGGGDSVALM HLLARCFPRG EVKLCVATVD
61 HGLRSESASE AALVARQAAG LGLPHETLLW TGWTGEGNLQ DQARRARYGL LTDWALRNRV
121 TTVALAHTAD DQAETLLMRL GRSAGVSGLA AMAPRRMQDG VVLVRPLLGI TRDALRDFLR
181 AEGIAWAEDP SNEDIRYDRI KARQALAGLA PMGIDAQRLA EVAANMARAR EALDWYTFLA
241 ARDLTRIDGG DVLLEPRGFR TLPDEIARRL LLHIVGWIGG GEYPPRRVAV AEALSALRHE
301 RSSQLGGCLI LGQGRRIRFC REWKAVETLT VPQGALWDGR WVLRGPVVKD GELRALGAAG
361 LKLCPDWRQT GRPYAALIAS PSVWSGADLV AAPLAGLANG WTAELESGEE DFYASLLSH
SEQDB ID: 3101377FF
Reference:
3101377
Name: ATPase, Isotype: MoxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEPADLIGE IDALGIKLQE ARASITRRFI GQERVVDLTL TALLCGGHAL LIGLPGLGKT
61 RLVETLSTVM GLHGNRIQFT PDLMPADILG SEVLDTAEDG SRRFRFIPGP IFCQLLMADE
121 INRASPRTQS ALLQAMQEKT VTVAGENRPL GTPFHVLATQ NPIEQEGTYP LPEAQLDRFL
181 VQIDVDYPDR ATEREILLAT TGVEEAEAHQ VMSQADLLGA QVLLRRMPVG ESVVEMILDL
241 VRAFRPDEPG VSDRVRDTVA WGPGPRAAQA LMLTVRARAL LQGRLAPSPE DVLDMARPVL
301 SHRMALNFAA RARGDTLAGL IDETAASLTR TEAAA
SEQDB ID: 3101377FFA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVAGVVLAV SLTFAGQAPA QDQQTLADIR QELTVLHVEV QRLKREFSTT GSPTPSTAGG
61 TVLERVDAIE SELQRLTRLT EQLNARIDRV VADGSNRVGD LEFRLCELEP ACDISKLSQG
121 TTLGGDVPVT PAATPQPSQP QTELAVGERA EFDSATQALE AGDYAKAADL FTQFDASYPG
181 SPLAAEAHLK RGKALDGLGD TREAARAYLA SFTGDGSGPF SAEALYKLGS ALGRLGQTSQ
241 ACVTLGEVSV RFPSAASVAD AHREMASLGC S
SEQDB ID: 3101377FFB
Reference:
3101377
Name: peptidoglycan-associated lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pal
Sequence:
1 MNKQRKSIGE APEMNVLSKL AAMGALVALA ACTNPEDLGD GNSVDLNGAG AGSGLVGDPT
61 SPAYFSQAIG DRVLFAVDQS TLGPEAQATL GAQAQWLLTN TDYTATIEGH ADEQGTREYN
121 LALGARRANA AREFLISRGV AGSRLKTVSY GKERPIEICS DEACYSKNRR AVTVLTTDLT
181 G
SEQDB ID: 3101377FFC
Reference:
3101377
Name: TolB protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRFLTSLVL GAALLAGAAQ AQNQPLRITI DEGIIEPLPY AAPNFVPDSP AAAEYAAEIA
61 RVLAADLTGS GLFREIPSTA YISQVTSFDA PVQFADWKAI NAQALITGAV SVSGNRLTVR
121 FRLWDVFAGA ELGSGLQFAG TTDGWRRMSH KVADAVYSRI TGESGYFDSR VAFVSESGPK
181 DQRRKRLAIM DYDGANVQYL TDSSSIVLAP RFSPTGDRVL YTSYQGGFPR IHILDVGQVQ
241 QRVLQSQDGT MSFAPRFSPD GQTVLFSLAQ GGNTDLYAMN IASGQSTRLT SAPSIETAPS
301 YAPDGSRIVF ESDRSGTPQL YVMSAAGGEA TRISFGQGRY GTPVWSPRGD LIAFTKQSKG
361 RFHIGVMRAD GSEERLLTAS FLDEGPTWSP NGRVIMFTRE TQGASGRAAL YSVDISGRNL
421 RPVRTPDGGS DPSWSPLQK
SEQDB ID: 3101377FFD
Reference:
3101377
Name: tonB domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTGTKISAL AHVTLVTWAF LGGAFRSDPL PFEVQEVSVI SAEEFAALSA PREAPEITPQ
61 PVEPEQPTAP IEQPAPLEPA PEPEPARPEP QPVTQPEPEP APEPVQPTPE PQVPSEAPSL
121 ERPEPETVLL PEPPGKRPKP RPVERVAPEP VAAPPPDARP DPVETPPVSA EEGAEAPQPE
181 QPATAPEEAT DRIEPETDPQ ADVAPSRSPR PKTRPQQPTQ TAETKPEAKP EAKPEAKPAT
241 GGQTDDSRNA VNEALAQALA ASEEPAAAPA PSGPPLTSGE KESLRVAVSQ CWNVGSLSSE
301 ALRTTVVVSV RMNADGTPDI GSIRLTDSSG GSTGAAKQAY EAARRAIIRC GAKGYNLPSE
361 KYDHWRDIEM TFNPERMRIK
SEQDB ID: 3101377FFE
Reference:
3101377
Name: biopolymer transport protein, Isotype: ExbD/TolR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGAALQQTEG GAGGRRRGRR RGRARPMSEI NVTPFVDVML VLLIIFMVAA PLMTVGVPVE
61 LPKTAAGALP SDDEEPLTVT VTAEGEVQIQ TTAVPRDELV ARLRAIAAER SSDRVYLRAD
121 GGIPYAQVMQ VMGALNAGGF SNVGLVTDTG GPRLDSGGE
SEQDB ID: 3101377FFF
Reference:
3101377
Name: H transporter, Isotype: TolQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tolQ
Sequence:
1 METEALALAQ EIDFSMWGLF ARATLTVKLV MLLLVLASFW AWAIIIQKHI LYRATRREAD
61 RFDQSFWSGE PLDELFEQIG AQPEGSSEKI FAAGMVEWRR SHRNDGGLIA GAQARIDRSM
121 DVAIAKEAEG LQRGLPVLAT VGSTAPFVGL FGTVWGIMTA FIEIAEQQNT NLAVVAPGIA
181 EALLATGLGL LAAIPAVIFY NKLSADSDRI VAGYEAFADE FATILSRQLD S
SEQDB ID: 3101377FFG
Reference:
3101377
Name: ORF TIGR00051
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHVFPVRVY YEDTDMGGIV YHANYLRYIE RARSDWVRNL GNDQNAMREA GLVWVVRKIE
61 AEYLAPARFE DDLTVLTEVV ALSGARLTMA QSVRRAEAEI FRATVTAVCM NGEGRPVRLP
121 AEIRALL
SEQDB ID: 3101377FFH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKGALPPRT KFVEFCRLPR NTFRKVKGQG RNSAAAGVDL GAGFDKKRGA FFAEPPAMLT
61 PETIETLFTR DDGSFQFARW GRPVVPIVFG VEDETLSVVK GAFEAVMALA GHKMAETDPE
121 LGANCMVFFF RDWEELLAVP DLDRLIPDLA ALVARLVGAG ANQYRAFRFD EAGAIRAAFV
181 FVRMDAQMAA QPAETLALAQ VVQVMLLWSE AAFRAQSPLA LAGDATILRP EIAGLIRAAY
241 DPILPGAARD ASHALRLYAR MERPQ
SEQDB ID: 3101377FFJ
Reference:
3101377
Name: Holliday junction DNA helicase, Isotype: RuvB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ruvB
Sequence:
1 MTDADPTLRP DPLPEDNDRA LRPQALDEFI GQAEARANLR IFVQSARQRG EAMDHTLFHG
61 PPGLGKTTLA QIMARELGVN FRMTSGPVLA KAGDLAAILT NLEARDVLFI DEIHRLNPAV
121 EEVLYPAMED FELDLVIGDG PAARTVRIEL QPFTLVGATT RMGLLTTPLR DRFGIPTRLL
181 FYTVDELFEI VSRNARKLGA PAEEAGAREI ARRARGTPRI AGRLLRRVVD FAVVEGDGRI
241 TRELADHALT RLGVDQLGLD GADRRYLRLI AENYSGGPVG IETLSAALSE SRDSLEEVIE
301 PYLLQQGLIQ RTPRGRMLAQ KAWTHLGLDA PRPPGQSDLF G
SEQDB ID: 3101377FFK
Reference:
3101377
Name: Holliday junction DNA helicase, Isotype: RuvA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ruvA
Sequence:
1 MIGKLTGRLD YRSTDHVLID VRGVGYIVYC SDRTLAALPG VGEVVALYTD MVVREDLMQL
61 FGFMSLAEKE WHRLLCSVQG VGAKVSLAIL GALGPDGVSR AIALGDWASV KSAKGVGPKT
121 AQRIVLDLKD KAPGVMAMGG TVAQAMEGAV EVVEVIEPAA PAPRKAAPPG GAGAATAGAL
181 SALSNLGYGP SDAAAAVAQA AAEAPEAGET DLIRAALRLL APKT
SEQDB ID: 3101377FFL
Reference:
3101377
Name: crossover junction endo-DNase, Isotype: RuvC, Class: EC3.1.22.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ruvC
Sequence:
1 MRILGIDPGL RTLGWGVIEQ RGSRLSHVAN GLCHSDGDDL GERLLSLHNQ IVEVIEEYRP
61 DQAAIEQTFV NKDGAGTLKL GQARGVALLT LAQAGLPVGE YAPNRVKKTV VGVGHAEKEQ
121 VIHMVKLQLP GCLPKGADAA DALAIAICHA YYGSAQALSQ REVRA
SEQDB ID: 3101377FFM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAALDTTRFA QGSFGLVGRI AALGSIIANA FVAWNDARAT RNALTALSDR ELEDIGMSRA
61 DIDAVVAGKT AY
SEQDB ID: 3101377FFN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEAAMVDNNV DFDQRIRRLN KKHEALSRGY TARMRKDGLI ELKPRRGGGR MPLRALVLLC
61 GAVLAFKAFL LASLGPDSYD ARLSRLAEGT PVEQAGAWVM QADPASLFLA EQIGPILR
SEQDB ID: 3101377FFP
Reference:
3101377
Name: ribosomal protein L11 methyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTFTALTTL TGKSQAEALG EAMETLTPEP TGIGVFELED GSGLWEVGGY FTETPDDTAL
61 ALLAAVHGAQ PFVVSELPET DWVAHVKREL SPVEAGRFFV YGSHDADKVP EGRIPLLIEA
121 SMAFGTGHHG TTLGCLRALD GLIELGFSAA KVADIGCGTA VLAMAAARVW QGDFLASDID
181 AVAVEVAEAN LKANGMAGAV TCLEAAGFDH PDLAAQAPYD LIFANILKGP LVALAPDVAS
241 HLRPGGYAIL SGILNEQADD VIAVYAQAGT NLVDRGVIGD WTTLLLRKID AF
SEQDB ID: 3101377FFQ
Reference:
3101377
Name: MATE efflux family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERRGRFLSG STMGHVVRMT LTGAMGITFV FLVDAANLYW ISRLGEPRLM AAIGFSFAIQ
61 FLSVSVGIGL MIGAVALISR GIGQGRRGLA RRHATSAMMI AFAVQSLAGL LIFLFRHQIV
121 ALSGATGETA ILAARYLALT VPSLGVMAAG MVANGALRAE GDGVRSMSVT LTSGGVAMVI
181 DPFLIYGLGM GLDGAALGVV LSRFVMLAMA LRFATGPHDL LARPRRRDVM GTLRPFMAIA
241 VAAILTQLAA PVGNYILTSV MAQFGDQAMA GWAVVGRLTV VAFGGIFSLA GAIGGIFGQN
301 FGAGEHARLR STYRDAVLFG LGYTLVMWAV LSLAAPGIGA VFDLQGPALD VLHAFTHVGA
361 GGFVFAALLF VSNAAFNAMG KARRATLTNW LRDGALTLPA ALWLAGAYGA EGVIYAQALC
421 SLVVGLGAAF WGWRFVVSLG RRHLPRLDLA PPRPYAHPDR YRRR
SEQDB ID: 3101377FFR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFRPVPLSQA ASLPFWRRPI TLLFVMAIAM PIAFNAWSAL LNNFVIEVAN FDGADIGLLH
61 TVREIPGFLA VGVIAVILVM REQVLGMISL VLLGLATAVT AWFPSLGGLL MVTLFSSIGF
121 HYYETVNQSL QLQWLSKERA PQMLGWLVAT GSASTLVIYG LIVLTWDRFE LSYNTVFMAA
181 GGLTVVIALF CLLAYPQFDA PTPQTKKLIL RRRYWLYYAL QFMAGARRQI FVVFAGFMMV
241 EKFGFDVHEL TGLYLINLVI NMGVAPLLGR AVARFGERRT LVFEYSGLAL VFAAYGGIYW
301 FGWGVTLAAI LYVIDHILFA LALALKTYFQ KIADPADIAP TAAVAFTINH IAAVFLPVLL
361 GLLWVVSPSA VFALAACMAL ISLGLSLLIP RHPEPGNETV LSKYMPAPAE
SEQDB ID: 3101377FFT
Reference:
3101377
Name: YeeE/YedE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLVSLVERI GEAPTAALFG LITGITFGVA AQRSRFCLRA ATVEFARGRM EDKVAVWLLT
61 FSTALVWVQA AQLMGLMNGA DARMMAVPGS WSGAIIGGLM FGAGMVLARG CSGRLLVLAA
121 TGNLRSVVSG LIFAVVAQMS LSGLLSPLRD KLAALWITEG GRNMNLLSTF GLPEYGGLVL
181 GLVCAVLALV LARRHRIGAA RLVFASGVGF AVALGWVLTY ALSQVAFEPV QIESATFTGP
241 SAHTLMFFLD RNAVLEFDVG LVPGVFIGAM IAAALAGEMK IQAFDGPVTM RKAMIGAALM
301 GFGGMLAGGC AIGAGVTGGS IFVGTAWAAL FFMWVGAMAT DFLIDQRAAS PRAA
SEQDB ID: 3101377FFU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRRLHEIRR TPDMTLKPSL ALAALSLAIA TSALAGAAIQ TGDTAKGAVL TDGNGLSLYT
61 FDKDTPAVSN CYDDCAAKWP PLEAANTARP QGEFGIVLRA DGSRQWTHKG MPLYTWIKDA
121 KAGDISGDGV KGVWHLARP
SEQDB ID: 3101377FFV
Reference:
3101377
Name: RNA polymerase sigma70 factor, Isotype: ECF family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAILDQIEAL IPDLRRYAHA LMRDREAGDD LVQDCLERAV AGLGGRRPDG ALRAWLFRIL
61 INRHRDLRRR AARAGHLVAV EDLVVEPARP AGQDSHMALR ETEAAIARLP EDQRRALLLV
121 ALEGASFDEA AAALDIPKGT LMSRLARARA NLRTMTGRGD PATGPAQRGK GA
SEQDB ID: 3101377FFW
Reference:
3101377
Name: sigma factor regulator, Isotype: PrtR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQDPLSDEE LIAYFEDALP PAERAALEAR LAQDPRAQAL LLDWARQNED IRALYGDMQE
61 DVVPARLRDA LCAPRAPLLR QALAASAVLM LGLVVGWAGH ARLGDPSPAP ALADAALTAH
121 RTFVVEVVHP VEVPASQRDH MNSWMSKRIG APVSPPDLSA SGFALMGGRI LPAGKWVAGL
181 YMYENSEGQR ITLYVAPQEE GNSTLRFAGD RQTESLHWAK GGLGFVLTGA LAREDLRQMA
241 TSAYEQLL
SEQDB ID: 3101377FFX
Reference:
3101377
Name: primosomal protein N'
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: priA
Sequence:
1 MDTGGLDSGG FFEEGALVSV LTTQPLDRTL DYKAPEGGCF VGAFVEVPLG PRKVLGVVWG
61 PGRGDFDRSR IRSVLRVLDV APMREEMRSF LGRTADYTLT PMPAMLRLAT RAPGLGDPPS
121 MRKVYRLGGV DPDRMTDARA RVLEVLRDYG GLAFTLKELA EMAGVTASVV KGLVKQGAVR
181 EEDSPRDLPY PHLDPDLPGK ALTEDQVRAA DSLRAGLRSG RYGTTLLKGV TGAGKTEVYL
241 EAVAEALRMG RQALVLLPEI ALTAEFLSRV EARFGARPAE WHSGATMTER RRVWRMVGQG
301 AAQLVVGARS ALFLPFRDLG LIIVDEEHDT SYKQEDGVLY NARDMAVLRA AICGARVVLA
361 SATPSLESWA NADAGKYERV ELTSRFGPAV LPQMQAIDMR AETMQPSSWI SPNLRRAVSD
421 RLAKGEQSLL FLNRRGYAPV TLCRACGQQI GCDHCDARMV EHRFLKRLMC HQCGETKPIP
481 ETCPHCGAEG RLAPVGPGIE RLAEEATASF PEARIAVLSS DMFGTARALK ERIEAIAAGE
541 ADIVIGTQLV AKGHNFPLLT LVGVIDADLG LQGSDLRAAE RTFQLMRQVA GRAGRAEKPG
601 QALLQTYQPE HPVIRAILAG DEERFWRAEA AERQAAGVPP YGRMAGIILS GPEAGPVFDL
661 GTAMARNDAA LRQIGAQVFG PAPAPIARVR GRHRVRLLVK APKGAPLQEA IARWIAPLRL
721 KGDLRLSVDI DPQSFL
SEQDB ID: 3101377FFY
Reference:
3101377
Name: fructose 6-phosphate aldolase, Isotype: 2, Class: EC4.1.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fsaB
Sequence:
1 MKFFVDTAEI DAIAELNDLG MVDGVTTNPS LIKKSGRDII EVTREICAMV DGPVSAEVTA
61 TDAETMIAEG RKLVEIAGNI AVKVPLTWDG LKACKVLSDD GHMVNVTLCF SANQALLAAK
121 AGATFISPFI GRLDDINLDG MELIEDIRTI YDNYGFETQI LAASIRSVNH ILDSARIGAD
181 VITAPPAVIK AMVNHPLTDK GLDAFLADIK AADIKIL
SEQDB ID: 3101377FG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGQKPVKPS ADGLLASARA IKSKGPAPVH LWNPPFNGDI DMRIARDGTW FYQGTPINRP
61 AMVRLFSSIL KREEDRFYLV TPVEKVGIRV DDAPFVAVDV EVAGQGRKQV LTFTTHVGDS
121 AVAGEGNPIR MAQDPATGEP APYVHVRAGL EALIDRKSFY RLMDLGEIED GWFGLWSSGS
181 FFPLMTVEEL ERG
SEQDB ID: 3101377FGA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSSPKLDET LREAIIAKPQ AVLDDKDIMH ALVAANERAM GGNVVDLRGI AMERLEARLD
61 RLEDTHRSVI AAAYENLAGT NQVQRAVLRL LDPVDFETFL RDLGTEVAEV LRVDAIRLVL
121 ESSQAERGAS LERLDDVLTV AQPGFVDSYL TAGRNAMPRQ VTLRQLQQAT PQVYGRRADW
181 IRSEACLKLD LGPGRLPGML AMGAEDPHQF TPQLGTDLLA FFAGVFERTM RRWLS
SEQDB ID: 3101377FGB
Reference:
3101377
Name: Tyr recombinase, Isotype: XerC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xerC
Sequence:
1 MSLISPACRD ALQLWLDTQR ALAGRAENTI TAYRTDVVEF MSFMTLHFGA TQGLAPLARI
61 GVPDMRAWMA QMRADGIGAR SLARKLSAVK SFYRWLAERE GFEPTAVLST RAPKFQRKLP
121 RPLAEDAARA MIDTVELQSS KPWIAARDMA VVTLLYGCGL RISEALSLTG RAAPLPATLR
181 IRGKGGKERL VPVIPVARAA VDTYLRLCPW PVEPETPLFR GARGGPLNAR SIQAVMAKAR
241 MQLGLPATAT PHAMRHSFAT HLLEAGGDLR AIQELLGHAS LSTTQAYTAV DTAHLMDVYN
301 RSHPKA
SEQDB ID: 3101377FGC
Reference:
3101377
Name: phosphatidylcholine synthase, Class: EC2.7.8.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcs
Sequence:
1 MTPQFRALLV HLFTATGAVF AMLAMLAAVD AKWDLMFLWL VVAFFVDGLD GPMARRYHVK
61 TYAPEFDGVL LDLIIDYLTY VFIPAFALFK SGLMDGWTGW LAIIIITFAS AMYFADTRMK
121 TKDNSFSGFP GCWNMVVLVI FALEPNFWVS LVLVTVLAVS MFLPLKFVHP VRTERWRAIT
181 LPMALAWTFF AGWAAWVGFH PESWAHWGLV VTSLYLIFAG IAQMVIPEKD TASPF
SEQDB ID: 3101377FGD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETRDCPVL RGYAAAAEAL YAVWEGLSSE AVLAPVLADL PAEPGRCLDL GAGSGRDAAW
61 LSGRAHRVWA AEPVAEFRAA GRRLHAAAAI TWVDDSLPDL ARVRALGLRF DLILAIGVFH
121 HLTPTAQQQG LSAALALLSA RGRMILSLRH GPTPPTRPGH PVDTDALVAT ALEQGVQVRR
181 LIRDHPSLLP DNRAAGVRRD WLCLSRE
SEQDB ID: 3101377FGE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRAAQKQA VQDKLMSLEA AELAAAKAHY EAFLKEAQLG DREVHDKDDL VASRESRDLA
61 AAFDAPVQAH HAKIDVIENT DFALTDTVGP GAVVSFGGRN FVVCVSTTRF EVDGKTYMGI
121 SMQSPIYLAM KDLRAGESFA HNGQDFEIED IM
SEQDB ID: 3101377FGF
Reference:
3101377
Name: methylated DNA-protein-Cys methyltransferase, Class: EC2.1.1.63
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ogt
Sequence:
1 MPSLTVDTPT GAFVLTEEEG AITRATWGRG GSDHTPLLDR AAEQLTEYFR GEREVFDLPL
61 RVRGSVLQRA VCDAIAAIPF GYTRTYGEIA RDLGSSAQAV GQCCGGNPIP VIIPCHRVMG
121 ARGLTGFSGQ GGVETKVALL RLEGAAGLLI
SEQDB ID: 3101377FGG
Reference:
3101377
Name: peptidase, Isotype: T4 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRARDLGLA IGRFPPGPLN AITDVGQVAV GHVTLIEGDR TRTGVTAILP HPGNVFADRP
61 RAGLSVLNGF GKFAGATQVQ ELGEIETPIL LTNTLAVGRA VEALVRYTLA QPGNGHVTSI
121 NAVVGETNDG RLNDIRAARP TVAEMLAALA NARPGPVAEG AVGAGTGTIS FGLKGGIGTA
181 SRRVGDYMLG VLVQSNFGGT LRVDGRPVAG VPEADADGSI VLVIATDAPL SSRNLTRLAT
241 RSFAGLARIG SSLSNGSGDY ALAFSVGPGE VLGNDACSPL FEAVIEAAEE AILNALLMAG
301 DMEGYDARHD RPYRVAGLVL
SEQDB ID: 3101377FGH
Reference:
3101377
Name: Ile-tRNA synthetase, Class: EC6.1.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ileS
Sequence:
1 MCADTTAETP EYKDTLNLPK TDFPMRAGLP AREPQWLERW EKIGVYDRLR EKQGRAPFTL
61 HDGPPYANGH LHIGHALNKT IKDMIVRSHQ MMGFDARYVP GWDCHGLPIE WKIEEQYRKK
121 GKSKDDVNVV EFRQECRRFA EGWIDIQREE FKRLGITGNW ADPYVTMDYH AEAVIADEFM
181 KFLMNGTLYQ GSKPVMWSPI EQTALAEAEV EYHDKESFTI WVKFRAVNSG DLDGAQVVIW
241 TTTPWTIPSN KAVVYGKDIA YGLYEITGTP EECWASVGDK YILADKLADD VMRRARLDPD
301 MYRRVGDVDP SQIGGLTHPL HGAEGGNGEW DDIRDFRAAE FVTDTEGTGF VHCAPSHGME
361 EFELYRDLGM LEQVITYNVM DDGSFRADLP FFGGKYILSR KGGEGDANKT VIDKLVEVGG
421 LLARGKIKHS YPHSWRSKAP IIYRNTPQWF ASVDRPVNDG QDSYGKTIRE RALTSIDQLV
481 KFTPQTGRNR LYSMIEARPD WVLSRQRAWG VPLTCFTRKG ALPTDADFLL RDPAVNARIF
541 AAFEAEGADC WYAEGAKERF LGNDYKADEW DQVFDVLDVW FDSGSTHAFV LRDREDGTAD
601 GIADVYMEGT DQHRGWFHSS LLQACGTLGR APYRNVVTHG FTLDEKGMKM SKSLGNTIVP
661 DEVVKQYGAD ILRLWVAQTD YTADQRIGPE ILKGVADSYR RLRNTMRFML GSLSDFTEAD
721 RIEDPAEMPP LERWVLSRMA ELDEQVRKGY AGFDFQGVYS AVFNFATVDL SAFYFDIRKD
781 VLYCDGDTTR RRAARTVLDL LFHRLTTWLA PILVFTMEEV WLERYPGEGS SVHLVDFPET
841 PASWRNPQNE SNVARVRRVR RVVTAALEIQ RRDKVIGSSL EAAPVVHVED AETRALLAQI
901 DIDDLCITSG LTVSADPAPA EAFRLPEIEG VGVVFEMAEG EKCQRCWKIL PDVGRHAHAG
961 VCGRCDAALG
SEQDB ID: 3101377FGJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSHSRLRIP RGNQLSKTSS IMNKPLLSLS ALALMTTLAA CNEPATPVGH TTLSLSDTVQ
61 LSAAGKTPAP ETITPVRITF PDSRSYSAVP PAFHPKTCQL SSSHFTAEVQ VPSEVNLPSY
121 GTKTPPMRVR CTSDQFEFDE TVKPVNLTQQ AYSTAAAAHI LVGYGLIGAA VTASQASQRD
181 KSQDVYGYPL KIELQ
SEQDB ID: 3101377FGK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEHGHSPQE VSQRIGAPPG RGVLRDVVYG GIDGSVTTFA IVAGVAGAGL SPFVIVALGL
61 ANVLADGFSM AAGNYSGTKA DLDNLHRLRA IEERHIAHYP EGERLEVREI LSQKGLSGEV
121 LDQATDAITA DRENWIALMI DGEYGLGGVD PHPMRAAIAT FLAFLVAGMI PLVPFLLGLA
181 EAFTVSAWMT GAVFFAIGAL KSRWSLAPWW RSGLETLAIG GTAAAIAYGV GTLFQG
SEQDB ID: 3101377FGL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSPLPLFQI TPAQIDHVVR VFYARIRTHA ELGPVFAAHV RDWPAHEARI AAFWRNAILK
61 ERCYDGNPMR VHVSRPDIRP DHFPLWLALF HEVLTQELAA ETAARWGALA DRIGHGLKMG
121 LTSMRQKPDE VPLFL
SEQDB ID: 3101377FGM
Reference:
3101377
Name: ORF TIGR01620
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 METVMTQGPV LFDLKDEKTP PPAVVEAPPV PDTDRPQGAA MLAAARVAAR RPSRLARWFW
61 GLAAALLGAV ISVAAWDFVT GLMERVPVLG WVMTALLAGF VLVALLIALR ELAAIGRLGR
121 VDGLRRAADA ALAENDLAQA RAVCRKLDTF YRGREETRWG RERLAERAGE QFEAHDLLAL
181 AEDSLLAPLD AEAQREVEAA ARRVATVTAL VPLALADVVA ALASSLRMIR RVAEIYGGRS
241 GVLGSWRLTR AVMAHLVATG AVAVGDDLLE TVLGGSVLSK LSRRFGEGLI NGALTARVGV
301 AAMEVCRPLP FSARRRPSVR GVVRRALTGI VGKTSG
SEQDB ID: 3101377FGN
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAALRPARP GDAEPTGDIL YRFAQDTPWM PKLYQRDETV GFCGVMIARG WVTVVVLGGQ
61 VAGFIARDGQ EICSLYLANA AQGQGLGTAL LADAMGQSDR LELWTFQRNT GAQRFYARHG
121 FVEAARTDGA GNEERLPDIR YEWRRS
SEQDB ID: 3101377FGP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVITTIADRV MRGVETVSDT LSEALFEPVI RLGVTGLARS GKTVFITSLV ANLLDRGRMP
61 GLVAAQEGRI EAAFLQPQPD DTVPRFDYEA HLAALTGPAP HWPDSTRAVS ELRLSLRVRP
121 GGLLGGLQGP RTVHLDIVDY PGEWLLDLGL MDKSFEDWSA GVLARIGPRP QAAAYLAALE
181 PVDPTTRHDE PQAQELARAF TAYLEAARGA GFSDCTPGRF LLPGDLAGSP VLTFAPLPVT
241 GAAPRRSLHR EMARRFEAYK AQVVRPFFRD HFARIDRQVV LVDALGAIHK GPQAVEDMRL
301 AMADILGAFR PGRNAWLNRL LLGRRVDRIL FAATKADHLH HKQHPQLTAI IEALTREARD
361 RAQFAGAETA ALALAALRVT TEEMRAHDGR DLPCVRGSLL EDGRQAAFYP GALPEEPGQL
421 LSPARAGAET WLGAGFKAMS FAPAPLQLKP GDGPPHIRLD RAAQFLFGDR L
SEQDB ID: 3101377FGQ
Reference:
3101377
Name: tRNA pseudouridine synthase, Isotype: A, Class: EC4.2.1.70
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: truA
Sequence:
1 MPRYALKVEY LGTPFAGWQR QKDLPSVQGA IETALARLEP GPHTIAAAGR TDAGVHGLGQ
61 VAHCDLTRDW DPFRLSEALN YHLKPQPVAI TAAARVAEDW HARFSATERQ YLFRLLMRRA
121 PATHDAGLVW QVGHRLDARA MQAAADLLLG RHDFTTFRSS ICQAASPVKT LDELRVEAVE
181 SFSGPEIRFH VRARSFLHNQ VRSFVGTLER VGAGAWAPED VRSALEARDR AACGPVCPPQ
241 GLYLARVGYP EPVFAADRSA AS
SEQDB ID: 3101377FGR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQREQDLYPP LKAMFERQGY VVKGEVGAAD LVARRGDEPP VIVEMKLRFS LSLFHQAVAR
61 LALSDSVYIA VPRPSGRTAR RALRDNLALC RRLGLGLITL RADGRVEVQC DPGPYRPRKS
121 KAREGRLLRE FDRLEGDPNA GGATRHGIVT AYRQDALRCA AWLAEQGASR GAVVARATGV
181 AAATRLMRDN HYGWFERAEK GVYTLTEAGR AGLVHWAYSW DQEAADLSAA KTGSG
SEQDB ID: 3101377FGT
Reference:
3101377
Name: GumN-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTAGNCRSL VMFRVFVICL CLLAAGGAAA RCTGTDMRDR LTPEAEARLT REIKQVPFAY
61 GNHWVATKGN RRIHVIGTQH TGDSRMRAAM RNLTPVIRSA DAVLLEVTQQ KLATLDTVLR
121 STPGLLTIPK GPGLDTMMRA EDWRLLSVRM AMHGVDERVL ARMQPWFISM SLSTSGCGGR
181 GLFAYRGLDD RIEKIAIRAK VPIGSLENVG DGMRALSAIP IRDQIQLLLL DLKSEVNYDD
241 QVVTMANAYF EQRLAEAMLI ESWTLYRDLK ISRSEVTRLL RQFDAHILDR RNRAWMPVIL
301 ASDAPVLVVA VGAAHLPGKT GILNLLKRQG YSLSRADF
SEQDB ID: 3101377FGU
Reference:
3101377
Name: GumN-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVPMLRFLP ALLLVLTPFT AQAACEGRDL RDDLSPEMRT EMEQAAAAIP FPEGNHWTAT
61 RDDTVLHLIG TLHVNDARME ATAARLEPVI AGADAVWFEL NTPDLAAFER EVMGNPKVAL
121 ITEGPTLIEL MSEEGWNRVA RALAERNVPA WIGAKMQPWV LGSILSLPPC LLRDPKAKQG
181 MDRRLAALAD SHGLPQHSLE TGAELLALFT ATPIEQQARE MDMFSAMLGA DADQLATLSA
241 IYFEEQNGAF MEFSRHDAMT RSGLTPEAFD PLWDSFMLEL VEGRNRNWMR HILEIRDQTA
301 VIAVGAAHLP GDQGLLNLLS EAGYSLSRAE F
SEQDB ID: 3101377FGV
Reference:
3101377
Name: Mn-dependent inorganic pyrophosphatase, Class: EC3.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ppaC
Sequence:
1 MTIQVFGHKS PDTDSTGSPI VWAWYLTEVA GQAAKPVLLG EPNTEAAFML SRWGLDKPAI
61 IADVEAGAPV VIVDTNNPAE LPASVNDADI RQIIDHHALI GGLKTKGPID ITLRPLACTA
121 TIMVDLMGDD AARMPEAIKG AALTCILSDT LEFRSPTTTD HDRAVAEKLA ADLGIDIPAY
181 AAEMFAAKSD VSSFSDAELL RMDSKEYNVD GKEFRVSVLE TTAPKVLLDR KDSLMASMVD
241 VAKEDGADQV LLFVIDILNE EATLLVPNDL VKTVAEKSFG ASVSGDTVVL PGIMSRKKQI
301 IPNLKV
SEQDB ID: 3101377FGW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQILESSIIG LRSACYVLSS PDYQPTVTLF PMVHVGDESF FETVYRDALA HDFLLAEGVN
61 SPVVKQLTRS YRWMAFDRLG LVLQPSIKGR SGRAQIIHAD LSAREFEEAW ARLPLWLRLV
121 APAHSTGVGL HRFLTMSRDR LVENRGMDEL SSRDDLLGWS PDQEALMRVI LDIRDERLCS
181 VLLGLLEANR EQDGTIAIVY GARHMRAVLR LLVQQGSFRV RKADWMPVIS L
SEQDB ID: 3101377FGX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPASILCCD TDNRRPQMKL TGGCYCGALR YEAEGEPMLK AQCHCRACQS YSGGAPNLFM
61 VMPAAGFRYV KGTPKSFRLE DRPDRVTRDF CATCGTGVAS HRPGLPAVIL KIGTLDDPAL
121 FKGPRAAVFA AEKQAFHIIP EGVHAFDGLP PT
SEQDB ID: 3101377FGY
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDVLLLHPTP CQRSSLAIAE DMLDSANRVA ALRGEAAPFR WRTLRPEAVG PGTPAPGLVV
61 LPGLGLASAH DLRAAMDSPA FATLSAALRH LAQPGTRIAG ACTGVFALAA AGLLDGRRAT
121 TTWWLAPLLR AWFPKVRVEM GEVLYSDGAL VTAGASFAQI DLMLHLIETQ AGYALAEDCR
181 RFLLADSRPS QLPYLSVATL VAGDPALQRA ELHLRRHIAR QVPLAELAEA AGLGARTFAR
241 RLARVAGMTP GEFAQTLRVT EAIRLYRAGG LSLEQIAHRV GYGDATALRR VMTRRTGRRL
301 ESFRT
SEQDB ID: 3101377FH
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTENSDDILN RLPARLKEAR RAQGLSLEAV ANLSGVSRSM VSQIERGESS PTIATLWNLT
61 RALQVDFAGL LEAAEAADRI DTLRASEVPS IDNMGQGCRI RILSPPEDAG GHEVYDISFK
121 PGGTLNSQPH ARGTREQLTV LDGAVRVTSG AAAQDLGPGD TARYAADIPH KISASGDGPA
181 RVFLIVKTA
SEQDB ID: 3101377FHA
Reference:
3101377
Name: hydrolase, Isotype: HAD-superfamily subfamily IIA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Comment: TIGR01459
Sequence:
1 MPGACGIYAL ATVSKPDPDM TQIITALAEI SERYRALFVD LWGCVHNGVT AYPEAVAALQ
61 AYRAAGGIVV LVTNSPKPRA GVATQLSQFK VPQDAYDTIA TSGDSARSAM FRGAVGQKVY
121 FMGEWERDAG FFEPLKLLDS PVEITRVPLQ EAEGIVCCGP FDPMADPAVN RPDFLYAKTK
181 GMKLLCANPD IVVDRGEIRE WCAGALARLY TEMGGESLYF GKPHPPIYDL ARRRLLSLGA
241 DIADSEILAI GDGIQTDIAG GQGEGIDSLF ISGGLAASET KTGHSPDPAA LTAYLDRENR
301 MPTYTIGQLR
SEQDB ID: 3101377FHB
Reference:
3101377
Name: MaoC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGSDAKLLR RMDREGDMLD NLPRGTICIE DIEMGMTRYL RKQVTDEDIE MFAQVSTDRN
61 PVHLDDEYAR DTIFEGRIAH GMLTAGLISA VIGEQLPGHG TVYMGQSLKF LAPVRPGDTV
121 YAEVKVIDID FAKRRVKLDC HCAVDGKKVL VGEAMVLAPS RKFD
SEQDB ID: 3101377FHC
Reference:
3101377
Name: monooxygenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAIVIGAGM GGLMTALALR QSGVFSAIEV YEQTRQPSTA GAGLNIPPNG ARICRWLGVD
61 LDGGDPKGPD GAIDGGRAAI LKSTRQFNTD GSVTERPFDH VTAVGDGAGF HHMHRLDLLM
121 CLYKRVFEFG PDSGTPCPIS VHMDSRLTGL EQSQGGVTAA FANGHTATGD ILVGADGINS
181 ATLSLAWPSP RPRRWTEVTC FRGLIPRETV AALRKPDGSP LDYNPIHSFS MDRHKTDRSG
241 ATTYWVRGGE LLNVWIARYE PDSTAFEQEE GDWFPISREE ITRDVGAAFA ELPNRDDLVA
301 LAGAMVRPTK WGLYDRDALD SWVQGRICLL GDAAHPMLPT FGQGAAQAFE DAAALGCAFA
361 LHRRDVATAL LHYERVRHYR ASRFQLGSKF AFDHLRPKDT EAQKALLEGL DERVTPAFSH
421 DKRGGENDAW IYAFDARNIG PTLPAKKWGP WDYREASKED HAKATQSLWR PEVPADGARR
481 VTRAEVARHN TRDDCWIIVS GKVYDITAWA PHHPGGAGIA RIYAGKEATA EFGDYHSAQA
541 VAHMAHFCIG ELVETSDDIQ PPA
SEQDB ID: 3101377FHD
Reference:
3101377
Name: riboflavin biosynthesis protein, Isotype: RibF, Class: EC2.7.1.26;EC2.7.7.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribF
Sequence:
1 MRIIRDYRFL EPADRGASVA IGNFDGVHIG HRSVIELARQ AAPDVPLGVM TFEPHPREYF
61 APDSPPFRLM RGPARAHRLE KLGVERLYEL PFNAALAGLT PEGFARGVIC DGLGLKHVVI
121 GADFCFGKGR SGNAADMVRF GQQMGFGVTI APLLEQTERV ISSTAIRTAL SEGRPRDAAA
181 MLGHWHRIEG EVIGGEQRGR ELGFPTANMS IDGLHPPRFG VYAVLVDVLD GPHKGSYHGA
241 ASVGVRPMFN GERPNIETFL FDFSGDLYGA TLSVGLVEYL RPEMTFDGLD ALIAQMDADC
301 ARARDILAAP
SEQDB ID: 3101377FHE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPIERNGL RPRFWERKPL ARLNKTEWEA LCDGCGKCCL NKLEDEDTGE VELTRVACRL
61 LDDESCHCTQ YPIRHQFVPD CIVLTPDNLD SHAYWMPRTC AYRLLWEGKP LYDWHPLISG
121 DPESVHRAGV SVRGITVSEF ETPEEDWEDH IIEEPI
SEQDB ID: 3101377FHF
Reference:
3101377
Name: Thr aldolase, Isotype: low-specificity
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFFASDNSGP VHPEILAGLT DANQGYAMAY GADTQMQAVQ EKIRRIFEAP DAAVYLVATG
61 TAANSLALAT LSQPWQTIFC SPVAHIHEDE CNAPEFYSGG AKLTLVPGGD RMTPEALRAS
121 ITGEETRGVH GPQRGPVSIT QVTERGGVYS IAELQALCAV AKAYGLPVHL DGARFANALV
181 ALNASPAEMT WKAGVDAVSF GGTKNGCMGV EAVIFFDPKH AWEFELRRKR GAHLFSKHRY
241 LSAQMLAYLS DDLWLRSARR ANDNCARLAE GLRAAGAEFL HEPQANIVFA SFPRAIHRRL
301 MGAGASYHLW GAELEGANED EMLACRMVCD WSIGTDQIDR FLSLL
SEQDB ID: 3101377FHG
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAAQALPQT AHVSHFGHGP RLVLALHCTI AHSGAWKGLT RILGEEAQFT APDMLSHGRS
61 PDWDGQGCFQ DRILGIARTC LTEAPMDVIG HSFGATVALR LAVEHPERVR SLTLIEPVFF
121 AVARQDAPEL IDSHASDAQP YLDALAAGDH ALAARLFNRM WSTADSPRWP DLPEATRAAM
181 IRGIHVVPTM DAALFDDTAG LLAPGRLDRA AMPVLLLRGA LTHPVMQAIS MGLQRRLPDA
241 VEMVIEGAGH MLPITHPDET AAHIRALWSR TG
SEQDB ID: 3101377FHH
Reference:
3101377
Name: 2-hydroxychromene 2-carboxylate isomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nahD
Sequence:
1 MADIDYFFAT LSPFSYLAGQ RLEEIATRHG ATIAYKPVDI MALFARTGGV PPKDRHPSRI
61 EYRAQELQRQ TRKTGLPLNM KPAFWPTNAA PSSYAIIAAG RAGGGDLGAL CHGILRACWA
121 EERDIAQDEV IRDCLAQAGF DPGLADSGLL AGAETYSANL EEAVERGVFG APFYITADGQ
181 RFWGQDRLDD LDAHLAEMKG
SEQDB ID: 3101377FHJ
Reference:
3101377
Name: ribose phosphate pyrophosphokinase, Class: EC2.7.6.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: prs
Sequence:
1 MPSLTEPKLI AGNANLPLAR SIARRMSLYR GVDQGLVDAR VERFNDGEIF VEVFENVRGE
61 DMFIIQPTSN PANDNLMELL IIADALRRSS ASRITAVIPY FGYARQDRRT KARTPISAKL
121 VANMLTGAGI ERILTMDLHA AQIQGFFDIP VDNLYASPIF ALDVQTQFKQ QMSDLMVVSP
181 DVGGVARARE LAKRINAPLS IVDKRREKPG EVAEMTVIGD VTDKICLIVD DICDTAGTLC
241 KAAQVLLDNG AREVHSYISH GVMSGPAVER VSNSVMKSLV ITDSIQPTPE ILAAPNIRVV
301 PTAPIFTQAI LNIWNGTSVS SLFEDKTLRP IYESLYHMD
SEQDB ID: 3101377FHK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCGFRAMKLF SSHPVAIQQG DEAMFSDFEN GGDMWTGSGS RERRKPVLFE QTFRSTPVVM
61 VTISLWDVDT SAAVRAEVKA ENVTPEGFEL VFRTWADTRV ARLRLGWTAI GDMRNEDDWD
121 VI
SEQDB ID: 3101377FHL
Reference:
3101377
Name: ATP synthase, Subunit: F1 epsilon, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpC
Sequence:
1 MANTMQFDLV SPERLLASLQ VSAVQIPGAD GDMTAMPDHA PTITTLRPGV LKVEGPEGTS
61 EYLVTGGFAQ IGADSLSVLA EKAIPVTEVT RAHLDELIAE ARSSHEAAKG QEHTSVVDDA
121 AKLLADMEAL GTHMGL
SEQDB ID: 3101377FHM
Reference:
3101377
Name: ATP synthase, Subunit: F1 beta, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpD
Sequence:
1 MANAKGKVTQ IIGAVVDVQF DDALPEILNA LETENNGKRL VLEVAQHLGE NTVRTIAMDA
61 TEGLVRGAVV TDTGGPISVP VGAATLGRIL NVIGEPVDEK GPVNATETRA IHQPAPSFDE
121 QSTSSDILVT GIKVIDLLAP YSKGGKIGLF GGAGVGKTVL IMELINNIAK VHSGYSVFAG
181 VGERTREGND LYHEMIESNV IKLENLEESQ VALVYGQMNE PPGARARVAL TGLTLAEQFR
241 DQSGTDVLFF VDNIFRFTQA GSEVSALLGR IPSAVGYQPT LATDMGAMQE RITSTKAGSI
301 TSIQAVYVPA DDLTDPAPAT TFAHLDATTV LSRAISELGI YPAVDPLDSS SRILDPQVVG
361 EEHYQVARDV QGILQRYKSL QDIIAILGMD ELSEEDKLTV ARARKIQRFL SQPFDVAKVF
421 TGSDGVQVPL EDTISSFKAV VAGEYDHLPE GAFYMVGGID EVIAKAERMA AEAA
SEQDB ID: 3101377FHN
Reference:
3101377
Name: ATP synthase, Subunit: F1 gamma, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpG
Sequence:
1 MPNLKDLKNR IASVKSTRKI TKAMQMVAAA KLRRAQESAE AARPYAERFN AVMAGLAASV
61 GGSDSAPLLL RGTGSDQVHL LVVMTAERGL CGGFNSNIAK LARVRANELL AKGKTVKILT
121 VGKKGRDAMK RDFAANMVGH VDLSGIKALG YANAQDIARD VLGRFDAGEF DVATIFYAKF
181 QNVVTQLPTA QQIIPAAFEA EGESDEVALF DYEPSEEAIL ADLLPRGVAT QIFSALLENG
241 ASEQGARMSA MDNATRNAGE MIDKLTIEFN RSRQAVITNE LIEIISGAEA L
SEQDB ID: 3101377FHP
Reference:
3101377
Name: ATP synthase, Subunit: F1 alpha, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpA
Sequence:
1 MGIQAAEISA ILKDQIKNFG QEAEVAEIGR VLSVGDGIAR VYGLDNVQAG EMVEFPGGIM
61 GMALNLENDN VGVVIFGSDR DIKEGDTVKR TNSIVDVPQG DELLGRVVDG LGNPIDGKGP
121 INAKLRGVAD VKAPGIIPRK SVHEPMATGL KAVDSMIPIG RGQRELIIGD RQTGKTAIAL
181 DTILNQKSYN DAAGDDESKK LYCVYVAIGQ KRSTVAQLVK KLEENGAMEY SIVVAATASD
241 PAPMQFLAPY AATAMAEYFR DNGRHALIIY DDLSKQAVAY RQMSLLLRRP PGREAYPGDV
301 FYLHSRLLER SAKLNEDFGA GSLTALPVIE TQGGDVSAFI PTNVISITDG QIFLETELFY
361 QGIRPAVNTG LSVSRVGSSA QTKAMSSVAG PVKLSLAQYR EMAAFAQFGS DLDAATQQLL
421 NRGARLTELM KQPQYSPLTN AEIVCVIFAG TNGYLDKVAL ADVGRWEAGL LQHLRGKHAE
481 LLAWITNEDP KIKDDAAGRV KAALDEYAAT FA
SEQDB ID: 3101377FHQ
Reference:
3101377
Name: ATP synthase, Subunit: delta chain, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpH
Sequence:
1 MSEPASISAG IAQRYATAIF AIAQDNNDLK GLETGINDLT AALGESADLR SLIASPLVSR
61 AEQEAAITAV AKKMKLNPVL ANALSLMAQK RRLFVLPQLL TALRDALAEA RGEVTAEVAS
121 AKALTKTQIE KLTKTLSEKV GKSVTINATV DESLIGGLVV KVGSKMIDSS IRSKLNSLQN
181 AMKEVG
SEQDB ID: 3101377FHR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAAVRLQLL PHMDSIYFFC NLTACYYLLL NRGTLVLGTI LFAALGVAAI ATVISSDDDS
61 HEEIADGDVP PPIEEEDGTP SLIQENGLTV VTGNEEPVQI DVEALDEDGD ARVYQGSEAD
121 ETVYIDPDTT SEFSILMGSG GADTVVTGLG QNISTTDGAD ADAEEADTVR LIYTPGASEE
181 LFEDGSVRGS FSMDKNDVLD VQFPEGESGT LLPVYSTFVS YPRDACCSFE EEHELTLVYI
241 PDEVEYSLEE LESSYYHDWE ALGMVPIADF HLGQRGEIDF THEGESGEFR EWDYVREPPT
301 VTSNLAIERQ ILIRY
SEQDB ID: 3101377FHT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHLDVQDLRN FYYRSTLGRA AQAAVRGRLL EIWPEAKGQT VAGFGFAVPL LRPYLTQARR
61 VIGLMPGPQG VMHWPAGMAN VSVLCEETLW PIETGHVDRL VVMHGLETSE HPTQVLDECW
121 RVLGPGGRAI FVVPNRAGLW SRSDKTPFGF GRPYTLGQLE TQLRKHQFLP EFHCSALYQP
181 PSFKRFWLKS GALIERTGTR LPTIMAGGVF MVEVSKQTNP QKGNMIRAKT PGRIRVLEGL
241 SNPMPEPASP
SEQDB ID: 3101377FHU
Reference:
3101377
Name: hydroxyacylglutathione hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLEIVTVPC LSDNYAYLIH DADAGKTALV DAPEAAPIQS ELDRRGWSLD QVWLTHHHWD
61 HVDGLAALRD RYKPTVIGAE ADAHRLPPLD LAVSEGDRFD LGGAPVEVLD VSGHTVGHIA
121 FHLPTGKAVF TADSLMALGC GRLFEGTPDQ MWASLSKLAA LPDDTLVCSG HEYTQSNARF
181 ALSVDPDNAA LKTRAAEIDQ ARAEGRPTVP SLLSLEKSTN PFLRAADPGI QSLLGMQGAD
241 PARVFAEIRA RKDHF
SEQDB ID: 3101377FHV
Reference:
3101377
Name: ATP-dependent clp protease, Isotype: ClpA, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: clpA
Sequence:
1 MPSFSSTLEQ AIHAALAAAN ERRHEFATLE HLLLALLDEP DAVRVMQACS VDLKELRDTL
61 VEFVDEDLSN LVTDIDGSEA VPTAAFQRVI QRAAIHVQSS GRTEVTGANV LVAIFAERES
121 NAAYFLQEQD MTRYDAVNFI AHGVAKDPAF GENRPVTGAE HGEEETSSAP SGDGEQKESA
181 LSKYCVNLNA KSRAGDIDPL IGRDHEVERC IQVLCRRRKN NPLLVGDPGV GKTAIAEGLA
241 RKIVAGEIPE VLSKTTIYSL DMGALLAGTR YRGDFEERLK AVVNELEDHP DAVLFIDEIH
301 TVIGAGATSG GAMDASNLLK PALQGGKLRT MGSTTYKEFR QHFEKDRALS RRFQKIDVNE
361 PTVEDSVKIL KGLKPYFEEH HEVRYTADAI KSAVELSARY INDRKLPDKA IDVIDEAGAA
421 QHLVAESKRR KTIGVKEIEA VVAKIARIPP KNVTKDDAEV LKDLEASLKR VVFGQDKAIE
481 ALSSAIKLAR AGLREPEKPI GNYLFAGPTG VGKTEVAKQL AETLGVELLR FDMSEYMEKH
541 AVSRLIGAPP GYVGFDQGGL LTDGVDQHPH CVLLLDEMEK AHPDVYNILL QVMDHGQLTD
601 HNGRTVNFRN VVLIMTSNAG AAEQAKSAIG FGRDRREGED TAAIERTFTP EFRNRLDAVI
661 SFAPLPKEVI LQVVEKFVLQ LEAQLMDRHV HIELTPQAAE WLADKGYDDK MGARPLGRVI
721 QEHIKKPLAE ELLFGKLAKG GVVRVSVKAG ELVLQIDGPD RPRISGDRPP LLTAD
SEQDB ID: 3101377FHW
Reference:
3101377
Name: peptidase, Isotype: M23/M37 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAGVDVLAS APGIVTGMRD GVVDRIYGPE NAAEVKGREC GNGVVVRHED GWETQYCHLK
61 QGSVRVRKGD RVQSGTVLGQ VGISGKAQFP HVHLSVRHNG AVIDPFDTGE TAQCGADAGS
121 LWRAAPDYDP GGMIDAGFAD AVPDYVQVQD GTAARASLPA DAGALVFFIL AFGGQAGDIL
181 RLSIEGPKGQ LLQQDMELER TQARFFRAAG RRLKGASWPG GTYEGSAILM RGGVEIDRTN
241 ATVTVD
SEQDB ID: 3101377FHX
Reference:
3101377
Name: OmpA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALSRRTGHR FQGSVWPGFV DAMTGLLMVL TFVLTIFMVV QFVLRETISG QEDELDALAG
61 EVGRLAQALG LEERANSQLQ ARLGALNATL NDTQDDLSQA QALIAALTVE RDRSRAALDE
121 AATRITAFEA QVAALLADRD RALGDVAALE DERGRLLSQQ EALNLALAQA RDEIDDRAEA
181 ARLAAARREA LEAMIADLRR SGEENAAQIG TLKQQLSEEE AARLAEAAAA QALREKLENA
241 DAELTAMTLA LEAQRREAED TLTLLAAADA AREQLNAKLA EALDQIEAAR AQARERDELA
301 ERLTRVLGQM EVARSEDAAR VSALEAELDR IRAEGGETRA ALAAARAHAE ETQSALEAAL
361 AQQRAATVAT RSQYQDELDR LQSEHAAARA ALEAELAKAR AEADTTRTDL EARLARGEAE
421 AASVRAGLEA ELARARADLS AARAAADSTA EDRASVEARL LMALESLERA QAAASDNEVL
481 QRRLLAALDA QTEAESSAAR QRSLAEERAA LLAQARAALS EEQAVSTEAQ RQTALLNQQV
541 AALRNQLGSL QALLDDYKAR NASAEVQLQS LGQDLNAALA RAASEERKRR LLEEAERKRL
601 EEEARVLAEQ AKDLERYRSE FFGRLRDVLG NQEGVRIEGD RFVFSSEVLF DPGSADLSPE
661 GQFEIAKVAR ILRAIAADIP PEINWVIRVD GHTDNVPLLG TGKYADNWEL SQGRALSVVR
721 YMVESLGLPP DRLSANGFGE YQPVNPADTA EARAQNRRIE LKLTEK
SEQDB ID: 3101377FHY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQPDREARP QFSHPTRQIL TMLIVIGLSG FGVFVAMPRV LPVFQANPYL NGFILLVFII
61 GVLACFWQVV QLIGSVRWIE DFAAGQERED TTPPSMLAPL ASLLRSRAAR MQISSSSTRS
121 ILDSVAERIE EEREITRYIT NVLIYLGLLG TFFGLATTIP AVVDTIRSLN PQEGEEGLAV
181 FNRLMTGLEA QLGGMGTAFG SSLLGLAGSL IVGLLELFTG HGQNRFYREL EEWLSTITRV
241 GFSSGEEGHS ESGAIAGVID TMVEQMDALH AMFAASEEGR AEISGKLGAL VETIAEMNQR
301 QAETEDVTAA LDRVAAGQET LIDFLREQGA HDGIDAESRM RLRSIDVQML RILEEISAGR
361 QESMAELRKD IELLAKALSV PRRPLRGVTR DEG
SEQDB ID: 3101377FJ
Reference:
3101377
Name: beta-ketothiolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bktB
Sequence:
1 MTDIVILDGA RTAIGTFGGA LASTAPIDLA TVVTEAALER SGVEGGQIGH VVFGHVINTE
61 PRDMYLSRVA AMQAGIPNGT PAMNVNRLCG SGAQAIVSAV QSLMLGDAEF AVAGGAESMS
121 RSPFIMTQAR WGAKMGDVKS LDMMLGALNC PFGTGHMGVT AENVADEHQI SREQMDQFAM
181 TSQERAAAAI AAGHFDGQIT PVQVKVKRDM VDFKVDEHPK ATSVEVLAGL KPVFKKDGRV
241 TAGNASGIND GAAAMVLATA DAAEKAGLKP KARILGYAHA GVRPEVMGIG PVPAVQNLLA
301 RTGLSIGDFD VIESNEAFAA QALAVNKELG LDAAKVNPNG GAIALGHPVG ATGAIITLKT
361 LYELERTGGS KGLITMCIGG GQGIAIAIEL L
SEQDB ID: 3101377FJA
Reference:
3101377
Name: cation transport protein, Isotype: ChaC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTMWVFGYG SLMWNPGFPV ARRELATLSG WSRSFCMSSI HHRGTEEKPG LVLALDAVHN
61 ARCRGIAFAV EPGHEARTLD ELRERELISS AYLERELEID LDIGERVCAV TYVIDPHHEQ
121 YCGGMPLERQ AQIIATAIGG RGPNTEYLYN TAAHLAEIGL GDPDLDWLSA RVREITS
SEQDB ID: 3101377FJB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVSAYKQEN EQRQKGQAML NLVRVALLAA VIWSGYWAVA GFGLRGSVVT WFETQAARGW
61 QADFTEAGLS GYPLRHRIEI EAPALADPDT GTAWRADRLV LQSPAIWPGR QSLLFPDTPQ
121 RLSYFDRTLV IKAEAMRADL DLAPGVALEL RTMGLSAGEW SVTRDGAVLA DADALTLSMT
181 QQDQPETYLF HAELSDLAPG RDLRRAMGGA EGLPRSFERA EISMAMTFDR PWDRAALEER
241 RPQPVEIDLS LAEAAWGELR LFAAGKVSVD EYGIPTGSVA LKAENWREMV AMAQQAGALP
301 DQAAEPLTRV LNMLAGLGGN PDALDLELGF RKGYVTLGPI PLGPAPRIIL R
SEQDB ID: 3101377FJC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGRGRILSA LVLAIWALPL AANAPARSLR PLLRPVAADP VVEAAIAAAT EEAAASVAVT
61 RMRPNLRPPS EQEILAAATP PVPGDTGLGL SPRPELRPKE VEERALFGRK KRMKGAVCGN
121 PDIQGASAGN VPGKIKGCGI KDAVRITSVS GVRLSTPAVM DCRTAEALNH WVARSVKPTF
181 RRRGPVVELQ VAAHYACRTR NNQRGAKISE HGKGRAIDIS AFVMNDGERI TVLEGWKRGA
241 TRKMLRQVWK EACGPFGTVL GPEADRFHKD HLHMDTARHR GGPYCR
SEQDB ID: 3101377FJD
Reference:
3101377
Name: prephenate dehydrogenase, Class: EC1.3.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPVYDRVAL IGLGLIASSM FWAIKRAGLA GEVTGFARSE ATRDTARRIG LCDRVCESAA
61 EAAEGADLVV LCVPVGAMGQ VAAEIGPVLK PGATVSDVGS VKRAVIDAVG PHIPEGVHFV
121 PAHPLAGTEH SGPESGFAEL YDNRWCLLVP TEGSDPQAVA RLRALWEGMG ANVEEMEADH
181 HDLVLAVTSH VPHAIAYTMV GVADHLRRVT ESEVIKYSAA GFRDFTRIAA SDPTMWRDVF
241 LNNREATLDI LGRFTEELFM LQRAIRMGDE TYLFDYFTRT RAIRRGIIEA GQDTDAPDFG
301 RVKGKPA
SEQDB ID: 3101377FJE
Reference:
3101377
Name: His-ol phosphate aminotransferase, Class: EC2.6.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisC
Sequence:
1 MRGYSSGAPR MNQFTPQPGI MDIALYQGGK AHVDGVANVI KLSSNENPLG PSPAAVEAIR
61 ATAAQAHRYP STDHAELRAA IGAVHGLDPD RIICGVGSDE VLQFVAQAYT GPGDEVIHTE
121 HGFSMYPILA RMAGATPVQV PERQRVVDVD AILAAVNDRT RLVFLANPAN PTGTMISEAE
181 VTRLADGLPG HVLLVLDGAY AEFVEGFDGG AALVSARDNV IMTRTFSKIY GLGGLRIGWG
241 YAPREIIDVL NRIRQPFNLS TMQLAAAEAA VRDQDWVARC RDQNTTWRTW LAARLAELGV
301 PSDVSCANFI LARFADQGEA EACDLFLQSR GLIVRRVAGY NLPQALRITV GDEAGCRAVV
361 DAVRAFKEAR A
SEQDB ID: 3101377FJF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSQFRNVI EADVRAGRLA DGLIGEKIMI PGLNGDVPLV YADYVASGRA LRQVEQYVSE
61 YVLPFYANSH TEASYCGAYI TGLRRAARAE IARLVGAAED DAVIFAGSGA TAGLNRLVSL
121 LGIAQAARPV VFIGPYEHHS NILPWRESGA KVVEIPEAPE GGPDLVVLQT ALRAHAGSDL
181 MIGAFSAASN VTGIITDTVP VTRLLKAHGA LSIWDYAGGG PYLPIDMGEG GLRKDAIVVS
241 PHKFPGGPGA SGVLVVNRGA VRRDVPTWPG GGTVSFVSPW GHDYSPDLAA REEAGTPNVI
301 GDIRAALAFV VKDAVGADEI ARREAHYNAM ALEGWAGNPH LILLGTDKGH RLPFFSFQVR
361 DGVGRPVHQQ LFTRMLSDVH GIQARGGCAC AGPYGHRLLG IDRATSEALH ADLAAGREMH
421 KPGWVRLNFS YLMDEATVRF IIDAVNDLSR RTGDYVPLYQ GDPATARFKA A
SEQDB ID: 3101377FJG
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKIDHIDTR LLKELQRDAS LSQRDLADRV GLSQNACWRR LKALTDEGVL KGSSARVARE
61 KLGLDLVVFV MLRTRHHSAE WLQKFRTHVL TIPEVVDFHR IGGDYDYQLK VVTRDMASYD
121 KVYQRLIEKV ELDSVTSYFA MEAIAEGRPL PL
SEQDB ID: 3101377FJH
Reference:
3101377
Name: ribose 5-phosphate isomerase, Isotype: B, Class: EC5.3.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpiB
Sequence:
1 MTASKRIVLS SDHAAIDLRR AVADHISAQG WEVVDIGPQT TESTHYPKHG RAAAERVASG
61 DCSLGIILCG TGQGIMMAAN KVAGIRCGVC FDTFSARMIR MHNDANMLSL GARVVGEGLA
121 LDIVDAFLSA EFEGGRHATR VDMIETPEG
SEQDB ID: 3101377FJJ
Reference:
3101377
Name: ribosomal protein S4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsD
Sequence:
1 MTKRTSAKYK IDRRMGENIW GRPKSPVNRR EYGPGQHGQR RKGKMSDFGL QLRAKQKLKG
61 YYGDLTEKQF RRIYGEAERV KGDTGENLIG LLERRLDAVV YRAKFVPTVF AARQFVNHGH
121 VLVNGKRVNI PSYRVKEGDV IEVRERSKQL ASVLEAVSLA ERDVPDYLEV DHSKMTATFV
181 RTPHLGDVPY AVVMEPNLVV EYYAKN
SEQDB ID: 3101377FJK
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTGFRGTFV ISWSQTDLDG LEGAPLDALT AGAVWSWRGE TVQVDGPTGV LRLDRADGEE
61 ALRKRAARKV RRLVGAAVQH RTDVEAIEVE DPLMDQAFVV TNGAQSYTIT VIETGNGAPP
121 LLMFIDELPP RNTDLWVVHH NLSAADPVPG ARERGGVICF TPGTRIATPT GPRLIEELRE
181 GDKVQTRDSG PQEIQWIGQR RMTGARLFVM PHLRPIRMRV GALGIDRPDA ELLVSPEHRM
241 LLRGPAAQAL FNSNEVLVPA RDLVNDSTIT VDLTLREVTY VHLLLPSHQI LWANGIETES
301 FHPANAALSA LAETDRRRLL QRMPEIEADP YLYGGFARRS LTPTEAALMM HEAA
SEQDB ID: 3101377FJL
Reference:
3101377
Name: molybdopterin-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLALPSVCP LDCPDTCSLS VTVKDGRITQ VRGSDANPFT AGVICNKVAR YYPDFVHGPR
61 RLTRPLRRTG PRGTGAYESI SWETALDLIH EGFTRAIAAH GPQSVLPLNY AGPHGELAGG
121 SMDRRFFYRM GATMLDRGPL CGGVRGTAYT SLFGAAPGMP PEQAEQADLV LVWGNNVTVS
181 NLHLMRVLKR VRAAGGRVVV IDPRRIKLAE QCDLHLQIKP GSDVVLAMAL AAELERRGAL
241 DHAFIDAWVL GADQYLAAAR GYDVQAVVQH CGLTPVAFHM LADWIAEART MATSLGNGIE
301 RGRSGGAGLR AAMALNALTG QHGRPGAGVI AKPGLAFPRT SAKLQGDHLK QPGTRVVNIV
361 DVAAHLLDET LDPPVQALMI YNHNPVATHP DQSSMIRALS RPDLFIAGAD VTMTDSMAFC
421 DVILPAASHF EFDDIYGAYG QTYLQRAEPV IAPVGESLPN TEIFRRLAAR FGYDGPEFRD
481 SDAALMDQAM DGTDPRLRGH APSQLPIDRA LEMTDPAGAP LVMCDTVVPA TPSGRIELFS
541 QDLEDRFGCG LPRHDPVAPD LPFTLITPSS SKRTNATFGS HADSLDPEMV EMHPEDAARL
601 GLDDGVPVVL RNGRGAVELR VKITDATRPG VLYSPKGTWR ESSATGQTVN ALIPSDIRTD
661 IERGACYNET FVEVSRA
SEQDB ID: 3101377FJM
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAIRRNELGQ PIGAALPHWR GCPRPERQRM EGSFARLEPL SAARHGADLW HAFAADTEGH
61 GWTYLPFGPF DDQAGMTAFL EAMSKTEDPL YFAICDRASG RAQGIASYMR IQPEHGVIEV
121 GGIAFAPVLQ RSRMATEAMF LMMAHAFDTL GYRRYEWKCD ALNAPSRRAA ERFGFSYDGR
181 FEQAIVYKGR NRDTAWYSIL NRDWPKLRQR FVDWLAPENF TSDGQQRNKL GVGRA
SEQDB ID: 3101377FJN
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTSWPAIS IDRTGPVPVF EQICAAIRAR ASTGDLPEGT AVPPTRVLAV ELGVSRSTVV
61 IAYEQLVAEG YLRARQGSGH VVCAMGEVEA APAAARPRPA RAEASPPSAR PFVAGTPDMR
121 LFPYRQWART VARLCRSNPQ AMFTTTDAFG NLALRGAIAA HLRDWRGVVA APEQIIITAG
181 ATDALELCMR SLSRTGETIA LEDPGYAPLR SFARAQGLRP VFLPLDEQGA TLPPPVETPR
241 LAVLTPSHQY PLGGAMSPSR RSAWAHWARS GDAWIVEDDY DSEFRYAGRP IPAMAGFDPL
301 SRTIYVGSFS KIFSNALRLG YLIVPEPLLG AFRQTVLRFG VRAGSMPQQA LAEFMSSGEF
361 YRHLRRVRRI YGERRRFLLD RLARDFAEFG SATDHQAGMQ TVLHLRPDLD DAALAERARA
421 AGLTVSALSR YCAVPGRGNG LILGFCAFSE VEMAPALDAL RDLLANA
SEQDB ID: 3101377FJP
Reference:
3101377
Name: Gly betaine transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: opuD
Sequence:
1 MSIKPPFTDI EVKRAASGFY QGHSVEIALF SKAIMVGLVL WALVWPANAN GVLGSLNWRL
61 LEDFNVFYIV IVGFFAVFLF VLAALPQTGK RIMGRPGEGT EFSNFSWFSM MFGAGLGVGL
121 MVFATAEPLG LWGSNPVVVS GAVQGNTEEA LQSAYRYTFA HYGFHAWAIY VVTGLALAYY
181 AYTRDMPLTI RSALTPLFGS LMNGFLGHVV DVLGVLATIL GVSVTIGFGV SQFIDGMYAI
241 TGMEWMMDMT GEAPAPGTVG LIAGLVVIMG LSIVSAVSGV GRGVKYLSNL NLVLSLILLF
301 TFVLFGSFLF AMTTYASALV DYLLNFLSIS FGAYGPQDPA AFVAALPAEA APYADALRGG
361 ATNAWGSFEG FKSGLEGEAA ALSDEVLAAA YAAGEPGRQF GWQAGWTTFY WAWWIAFSPF
421 VGLFLARISR GRTVREFIIG CLFAPALVCF AWMTILGGTA IDLELTGDAN GAIIGASNTA
481 KLFVTLGQML SGGFLSAITI MCVVLIMTFL VTSADSGILV MNTIMSGGDQ NVGNKHKIVW
541 GVILTAVIGT LLIAGKTNGG ADPMEALKSA MIIGALPFTA VMGLMCVSLA KALYRDGKRE
601 KLGLAVGDPA E
SEQDB ID: 3101377FJQ
Reference:
3101377
Name: malate/L-lactate dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTETRTLSLD EIEDLSFRAL VAVGTSEANA RPLAVATAAT EADGIASHGL LYIPIYCEHV
61 QCGKVDGQAE PRLDRPAPSV LTVDAATGFA HAAIDLGFDQ LMPLARSQGV AVLAIRNSYN
121 CGVLGYHTAR LARAGLVGLG FTNAPASIAP SGGSKPVVGT NPFSLAVPGE DGEPAILIDQ
181 SASTIAKSEV MKHAREGKPI PVGWALDGEG NPTTDPEVGL KGSMAPSGGY KGVGVALLVE
241 TMAAALTGAT LGIDASPFSG TAGGPPRTGQ FFIAIDPGAT SGDRFAPLVA RLAAAVHDQD
301 NAHLPGDGRR GRRLRARAQG VAVNSATLER IEKIIAA
SEQDB ID: 3101377FJR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFSLNEIEA TAKRATRGAG YPWGLAEEAA KATRWLAAHD LDACAELAGL LTRIDGVPLA
61 DLAPEPKGTT WVASGGTMCP LAAGAALSDR AAQLRDTGIR LEQLARPALL MPFAALIAQQ
121 IGRPVTLRWE GGSAVTDGVA LDLSGTAPDL AAWVEVSPGG QIDAATPIRS RARPAPEAWV
181 TLNRLAHRTY APATEESRLK GAGAGLSDND
SEQDB ID: 3101377FJT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDTAPNRQIQ RRDPATVMRL SRLGSLHQCR LSFMRILTRR MARENWSFSR PVFRIDAAGV
61 GHAVYTAQGP ERAYSLVAFA HDLPPEMRSD RVIATAWDAT FTLFDGIPTE DDIARLSQNV
121 PLQEAGRVSE CEISVSRANR SVRLWAHVVD ALASGQQPDR AEIDKVGYLM RTTAVYGSGK
181 LGAADREQIA DRPEMQVPFQ AEMLSVYLTR VFVRDLVQHM ARAKGGESAV DLDPALARRM
241 GIGNSTGLGM APYIVNHPVL FNNWVMAREE AIARVRSVAT ASPDAAAQFR RMLRRSEVSL
301 GQWRSEHPIQ LEKLGDLRRD MEVLSRHVAG DDLLNDHPWD RLMRWAEGAL SEEGQELVAS
361 LILEPYPDLV DGLDSCMADG NPGAFRIEGA MAISELRGLI AASYAWAFDL DWSAPENCAR
421 AWYVSEEKLE PRLGERFDEP VAEYEQPLAP ARDAAAAHAA LADWDGARLV AEFLLAHPEH
481 RHTVRRAQMS RLAPYGEIHD NTISASVLPI DMLRAKLAFF GAIHFDPRSD RWVRICMYSG
541 APYPEELSPE TADDWVYPEV PA
SEQDB ID: 3101377FJU
Reference:
3101377
Name: renal dipeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYRIDGLQY ANWSEKIFRQ LRAGNVDAVH VTIAYHESFR ETVLNFEKWN RWFEQYPDLI
61 MKGQWASDID TARETGRTAI FFGFQNPSPI EDDIGLVEIL HTLGARFMQL TYNNQSLLAT
121 GCYEAEDAGI TRMGRQVIKE MNRVGLVVDM SHSADRSTIE AAEISERPIA ITHANPHDWA
181 PALRNKRDDV IRAVTENGGM LGFSVYPHHL KDKSDCTLDS FCEMIARTAE RYGVDHLGIG
241 TDLCQDQPDS VVEWMRTGRW SKEIDFGEGS ASAPGLPPMP HWFEDNRDFG NIENGLRATG
301 LNKDEVAGIM GGNWYRFFAQ NFVPQG
SEQDB ID: 3101377FJV
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTKLNLIA GEWLAGEAEI ENRNPSDLSD LVGMFAQASA DQLDATLHQA RRAQAEWAAY
61 GMERKQAVLM AIGTELMARA EELGTLLSRE EGKPLAEGKG EVYRAGQFFT YYAAECLRQL
121 GENADSVRPG VEVDVRREAV GVVAVISPWN FPTATASWKI APALCYGNAV VWKPANITPA
181 SAVALTEIIA RQDIPKGLFS LAMGSGRSIG QRLVESPLVN AISFTGSVPV GKGIASAAIQ
241 NLTKVQMEMG SKNALAVMDD ADLDLAVTLA LGGAFGGTGQ KCTASSRLVV HAAIHDAFVE
301 KLVAGTQAMK VGHALAEGTQ MGPVVSQQQL SENLAYVDLG KSEGAELACG GQRLEMPQEG
361 YYMSPGVFLN TTNTMRINRE EMFAPLTSVI KVGSYDEALS VVNDTNFGLT SGIVTKSLAR
421 ATHFRRNART GVVTVNLPTA GTDYHVPFGG RGDSSYGPRE QGKAAAEFYT TVKTAYISAG
481 APQ
SEQDB ID: 3101377FJW
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKIEMLRCF STVAQTGNLA DAAMRMGRTQ SALSMTLKQL EEHLGQRLFE NERKNRLTPL
61 GQEVFRFAQQ QLRQFDDTIQ AIEAAARAPQ GLLRVASIPS ASGLALPGAI ETMMQRHPAL
121 ELELRDMDTG RVVDALLQGQ ADLGIVSGQP VLNGVESETL FEDAFGLLCA TGHPLAQQAQ
181 LPDVDAVFAS GFIRNSLCAL IEAPEIRAAL PRARITVHNT HSLLAMVRTG KWVTILPRSV
241 AQVQPKELVF RPIAGLEEQR SVSMLIHTRA QFPQLVAEFA DILRHSPWTG
SEQDB ID: 3101377FJX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDNYVNLIKL SVGSESVDSL AEWQATRRAQ TPDGLPRHVT RMWPKREGEI LNGGSIYWVI
61 KGLIQCRQRV IRMDEVTGQD GTRHCALVLD PELHRTHSTQ KRPFQGWRYL NPADTPPDLP
121 KGRAQDDALP EDLNRALAEI GVI
SEQDB ID: 3101377FJY
Reference:
3101377
Name: ribonucleoside diphosphate reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRFAAPIAE QIWDMKYRFK QADGTPIDQT VEDSWRRIAR DLARVEQDPD RWEREFYTAL
61 EDFKYLPAGR ITAGAGTARQ VTLFNCFVMG TIPDSMGGIF EMLKEAALTM QQGGGIGYDF
121 STIRPRGADV KGVAADASGP LSFMDVWDAM CRTIMSAGSR RGAMMATMRC DHPDIEQFIG
181 AKSDPARLRM FNMSVLVTDA FMEAVKADGS WELQFDGKVY HTVEARTLWN KIMQATYDYA
241 EPGVIFIDRI NAANNLNYVE TIAATNPCGE QPLPPYGACL LGSVNLARLV SNPFEDAAEL
301 DPEALQKLVA TAVRMMDNVV DASRFPLPEQ AAEAQNKRRI GLGVTGLADA LLMLGLRYGS
361 DEAAKQTEDW LHAIARAAYL ASVELAKEKG AFPLFDAEKY LASGTMRAMD EDVREAIRTH
421 GIRNALLTSI APTGTISLYA GNVSSGIEPV FAYAYTRKVL QKDGSRTEEE VVDYAVQMWR
481 DKFADAPLPD YFVNAQTLAP ADHVRMQAAA QKWIDSSISK TINCPEDISF DAFKDVYMQA
541 WDLGCKGCTT YRPNDVTGSV LTVSESADKA PGESASAPHG TEGGDVIYMS EPLDRPQTLE
601 GNTYKLKWPD SEHAIYLTIN DIIINGHRRP FEVFINSKNM EHYAWTLALT RMISAVFRRG
661 GDVSFVVEEL KAVFDPRGGA WVKGKYIPSI LAAIGGVIEQ HLIAIGFLEG EGMGLKSDPQ
721 AQVVNGDMPR GKACPSCGQF DMQMVEGCMT CRSCGHSKCG
SEQDB ID: 3101377FK
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARTNPHRPF VPDPEQAALA PGVSGNDING LGETAFRRPR MVYWAPDPDD IPHGSLQRYF
61 YRQSAKEPDF ASRRAARQAV LDAPLPLLAD TVVIRDPADW TAALTQFVDS GLCDLTGVAE
121 MNPDWVFEGH EIPQSRVIMI GVAHDYNVIA TAPKPSAGLE VMTQYTRAAQ AAKTIAGWLR
181 QQGWQAEPLT GPMTGALAMI PPALACGFGE LGKHGSIINP DLGASFRLSA VLSDAPFAPT
241 PAQDHGIDGF CQNCHICQDA CPPEALFAQK QTVRGARKWY VDFDKCLPFF NQTHGCAICI
301 AECPWSRPGI GPNLAAKLAR KRNRDATG
SEQDB ID: 3101377FKA
Reference:
3101377
Name: histone deacetylase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKTAFISNE KCFWHFGGNY ALLAPVGGLV QPMVAGGLPE APETKRRLKN LIEVTGLHSD
61 LEMVTGGSAT IEDVLRVHPR SYIDEFRRLS DSGGGELGLR TPFGPGAFEI AMLSAGLVID
121 AVEGVVQGRY RNAYALSRPP GHHCLPDWPN GFCLLANIAI AIEAAKAKGL LGKVAVLDWD
181 VHHGNGTEAI YYERDDVLTI SIHQDRCYPH DTGSIDDQGK GAGLGFNMNI PLPPGCGHNA
241 YVEATERLII PKLKAFDADL VIIACGFDAG GFDPLARMMC SAETFREMTR RVMQVSDGKL
301 VAAHEGGYSE LYVPFCGHAM LEEMSGSTIH AADPLAQRVM GQQPGERVQA FHSELIDDMV
361 AKLL
SEQDB ID: 3101377FKB
Reference:
3101377
Name: DNA repair protein, Isotype: RecO
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWRDQGILL AVRRHGETSA IIDTFTASHG RHAGVVRGGT SRRIAPILQP GAQLDLSWRA
61 RLEDHLGSFT VEPLRSRAAA AMSGRLALAG LNAVVSLLSF CLPEREAHPR LYKQSEQLLD
121 LLGQDEIWPL AYLRWELALL DTLGFGLDLS SCAVTGNSDD LVYVSPRSGR AVSAGAAGEW
181 AERLLPLPPC LRGEGPAPDP EIAQALRTTG HFLEHRVAPA LGHAPLPQAR GRLLDLISRL
241 P
SEQDB ID: 3101377FKC
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPARLALLLP ALALGYCGQD ETATAYGAAG QVWQAQSIDA AAFAVGAELR FPEPGRIAGQ
61 GPCNSFTARL DAPYPWFEIA DLVATRAACP ELEAEGAFFA ALLAMEQIEV SGEVLILRNE
121 AGHEMLFRAA D
SEQDB ID: 3101377FKD
Reference:
3101377
Name: RNase, Isotype: III, Class: EC3.1.26.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rnc
Sequence:
1 MKLSAEMKAF EARLGYSFER PELLVRALTH GSISSSTRQD NQRLEFLGDR VLGLVMATAL
61 LEADKDATEG QLAPRFNALV RKETCAEVAR EADLGAVLKL GRSEMMSGGR RKLALLGDAM
121 EAVIAAVYRD GGFAAAEAVI LRLWGARVHQ VEADARDAKT ALQEWAQARG QTPPRYELVK
181 RSGPDHAPVF TILAELADGR RAEATAGAKR QAEQAAARKL LDSLD
SEQDB ID: 3101377FKE
Reference:
3101377
Name: signal peptidase, Isotype: I, Class: EC3.4.21.89
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lepB
Sequence:
1 MASKAAKTGN AFVETIKTIV YALLIAGVFR TLFFQPFWIP SGSMKETLLI GDFLFVNKMA
61 YGYSYASCPS LVLPQFGIDI DAEDVCGWAK GDNDRLFGGT PERGDVVVFR HPVSGRDFIK
121 RLIGVPGDRI QMKDGVLYIN DQAVKLEDDG VFEELAEAQG PQRLRPRCEN GPVGEGGICQ
181 KSRQIETLPN GVSHKIVNIG NQASDHTGVY TVPEGNYFFM GDNRDNSSDS RLPQSAGGVG
241 YVPYENLIGR ADRIMFSSAG RSMLFFWTWR SDRFFKGIE
SEQDB ID: 3101377FKF
Reference:
3101377
Name: holo-acyl carrier protein synthase, Class: EC2.7.8.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acpS
Sequence:
1 MILGIGTDLA NIERIERTLD RFGDRFRNRV FTEIEQRKAE RRSDTAGTYA KRWAAKEACS
61 KALGTGLRMG ISWKDMAVSN LRSGQPVMQV TGWAAERLRE MTPEGYEAII HVTLTDDHPW
121 AQAFVVIEAR PLAEVGEVNL TYPAPPRM
SEQDB ID: 3101377FKG
Reference:
3101377
Name: pyridoxal phosphate biosynthetic protein, Isotype: PdxJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdxJ
Sequence:
1 MSVPHLRLGV NIDHVATVRN ARGGEYPDPI RAAKIAEQAG ADGITAHLRE DRRHITDADI
61 DGLMAALSVP LNFEMAATDE MQKIALRHKP HAVCIVPEKR EERTTEGGLE VAREENRLAH
121 FIAPLREVGC RVSIFIAADR RQVEAAHRIG AQVIELHTGA YCDAHAEGDF ATRDRELEAL
181 REMSAFAHSL GLEVHAGHGL TYDTVQPVAA FPEVMELNIG HFLIGEAIFR GLHPAIAEMR
241 RLMDEARA
SEQDB ID: 3101377FKH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVFKRRDRRS PLQVLWELIW PRGGWTRAFH YVKHRVRRLP DRPERIARGI GAGVFASFTP
61 FYGIHFVIAA ILARLINGNI LAGLSGTFFG NPLTYVPIGV VSLQTGHFLL GTEFHEGAKQ
121 GLMRKFARAA GDLKDNFLAL FTDRDADWQA LGLFFDEVFF PYMIGGIAPG IVAGVVCYYL
181 SLPVISTYQK RRRAKIKAKF EAIKKKAQAD LPNPGNPG
SEQDB ID: 3101377FKJ
Reference:
3101377
Name: guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSWRRRGRA EDAARKDADR MISADDLIAL VRNYNPKTNA ERITRAYEFG QQMHDGQFRH
61 SGEPYFTHPV AVAAILTEQR LDDATIITAL LHDTIEDTKA SYGQVSELFG EEVAMLVDGV
121 TKLTNLQLSS RETKQAENFR KLFMAMSKDL RVILVKLADR LHNMRTIKAM RPEKQAVKAR
181 ETMDIYAPLA GRMGMQWMRE ELEDLAFRVL NPEGRQSIIR RFITLQRETG DVIHRITGDM
241 RHELDKAGIE AEVFGRAKKP YSIWRKMQEK DQGFSRLSDI YGFRIITLSE EDCYRTLGAI
301 HQRWRAVPGR FKDYISQPKS NGYRSIHTTV SGRDGKRVEV QIRTRQMHDV AETGVAAHWS
361 YRDGVRTQNP FAVDPAKWIA GLTEQFDSEE DHEDFLEAVK LEMYSDQVFC FTPKGDVVKL
421 PRGATPIDYA YAIHTRIGHA CVGAKVDGIR VPLWTRLKNG QSVDVITAEG QTPQVSWLEI
481 AVTGKAKTAI RRALREVDRE RFIKLGHELA RSAFDHVGRK ATDKALDTAA KHLRLKDRSE
541 LLARLGSAEL TAHDVVQAVY PELAPDEGDA IPPRRAVIGL EPGQSFDRAP CCQPLPGERI
601 VGITYRGKGV VVHTIDCDRL SEFETQPERW VDLHWHSGTH PAAYGATLDL TIGNDAGVLG
661 RICTLIGEKK ANISNLEFID RKPDFYRLMI SVELRDVEQL HSLMLALEAE GDVASVERYR
721 EKAKAGAAAG
SEQDB ID: 3101377FKK
Reference:
3101377
Name: DNA-directed RNA polymerase, Subunit: omega, Class: EC2.7.7.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoZ
Sequence:
1 MARVTVEDCV DKVPNRFELV LLAAHRAREI SAGAAITVDR DNDKNPVVSL REIADETQSA
61 DDLRERLIEA NQTQIEVDEP EEDQMALLMG AESDRPVEDD MSEERLLRAL MEAQGQG
SEQDB ID: 3101377FKL
Reference:
3101377
Name: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, Class: EC2.7.6.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: folK
Sequence:
1 MVSEQFAVIA LGGNLSFDQT PPEVTLRNAV RMLARRGLVI RDESRFFTTP CFPAGAGPDY
61 INAAISINTN LSPVALLELL HQVEAEFGRA REQRWGMRTL DLDLICHGDS VLPDRAGHDA
121 WRQLDPARQA ELAPDQLILP HPRLQDRGFV LVPMADVAPD WRHPVLGLSV QEMLAALPAG
181 DLAEIRLL
SEQDB ID: 3101377FKM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFYKDERLAL FIDGSNLYAA AKALGFDIDY KLLRQEFMRR GKMLRAFYYT ALLENDEYSP
61 IRPLVDWLHY NGFTMVTKPA KEYTDSMGRR KVKGNMDIEL TVDAMELAPR VDHIVLFSGD
121 GDFRPLVASL QRQGVRVSVV STIRSQPPMI SDELRRQADN FIELEELREV IGRPPREVPA
181 EPRSFAANGN
SEQDB ID: 3101377FKN
Reference:
3101377
Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, Class: EC1.17.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispH
Sequence:
1 MTKSPLTLYL AAPRGFCAGV DRAIKIVEMA IEKWGAPVYV RHEIVHNKFV VDGLRAKGAV
61 FVEELDECPD DRPVIFSAHG VPKAIPAEAE RRQMVYVDAT CPLVSKVHIE AERHAEHGLQ
121 IIMIGHRGHP ETIGTMGQLP EGEVLLVETV ADVARIAVRD PARLAFVTQT TLSVDDTRDI
181 VAALQARFPQ IVGPHKEDIC YATTNRQEAV KAVAPKSDAL LVVGAPNSSN SRRLVEVAAK
241 AGCSYAQLVQ RADDIDWRAL DGIATIAVSA GASAPELLVN EVIDAFRARF DVTVEVVETA
301 VEHVEFKVPR VLRQPA
SEQDB ID: 3101377FKP
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPNRPALTG YRYSVYTRAA RLALIEKAVA YDYHEHDPFA PGAQGAHPFG RVPVLHHTGA
61 RFYETAAITA YVDLAFPGPA LMPERPAAVA RAVQVISIVD AYAYWPLVRQ VYSHAVFRPA
121 MGEPASQQSL REGMERAPAV LAALDEIAAE GLVLSGPVTR ADCHLAPMIA AFVQAPEGAD
181 LLRRYPALAA WWQDMAGRDS LHLTETPLP
SEQDB ID: 3101377FKQ
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MISLQFFITA FVVVLAPGTG VIYTLAIGLG RGRSAAAWAA LGCTLGILPH LAAAILGLAA
61 ILHSSALLFQ LVKAAGVAYL LYLAWQALRS DGALAIRSEH SHQPGWRIAW RGALINILNP
121 KLSVFFLALL PPFLSGNPAS ATAEMSLLGL VFMAMTFAVF LLYGAFASAA RTYLMQSERA
181 LRWMGRGFAL VFAGLAARLA MERA
SEQDB ID: 3101377FKR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAIPRAPLI LGLAGLIPFL WGALTYLSPA AQAWGAAALG PRFVGPYVQI AYGQIILAFM
61 SGVLWGFATK ADDRRAATGY VLAVLPALWA FFMTGGGPTG AAINLIFGFL GLLMLDAAFA
121 SWGLAPVWWM RLRLLLTAVV TICLAVGAFL
SEQDB ID: 3101377FKT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGSRSLLVS DPETIRIYDD RASDYAALTE DHNAADPALE AFVAALPPGG RVLDLGCGPG
61 TSAARMAQTG LTVVAVDASG EMVALAARHP GVTARQARFD EIDETAAYDG IWANFSLLHA
121 PQAEFPGHLA HLFRALKPGG IFHIALKLGT GEGRDSLGRF YSYYQEDALE HLLQQAGFTI
181 TARSFGAGPG LSGKVEDWIA MRAHA
SEQDB ID: 3101377FKU
Reference:
3101377
Name: RNase HI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rnhA
Sequence:
1 MPELFAYTDG ACSGNPGPGG WGVLLRAIEG ETVLKERELC GGEAETTNNR MELLAAINAL
61 ETLERPSKIT VVTDSAYVKN GVTGWIFGWK RNGWKTAGKK PVKNVELWQR LDLAQARHDV
121 TWKWVKGHAG HPENERADEL ARAGMKPFKP KKARA
SEQDB ID: 3101377FKV
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLLALLDYA SVLVFALTGA LVASRAQLDL VGFAFVACLT AVGGGTVRDL LLGRDPVFWV
61 GQPAYILIAS GAAALVFFTA HLVESRYRLL IWLDSFALSI AVAAGTGVAL AQGQPPVIVV
121 LMGMMTGCLG GLMRDVVCNE VPLVLKQGEL YVSCALAGAV AAVIATGLGL ATLPALGLCA
181 LVCWGLRAGS LIFGWRLPVY KSRPPRTRG
SEQDB ID: 3101377FKW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHIVVLIIIG AAAGFLATRL MRVEADIPTT MLIGIVGALI GGLILRALLT MMGWLSGFVG
61 AVLGALLVVW LWQTYLRRR
SEQDB ID: 3101377FKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMFMVLMGT VVIAGIVGYI SEKSGFTHNG YLQSIIICVG GAFLFYFVRI MFGIGFGSAG
61 MNAILSSIGA LIIVPFHWRK
SEQDB ID: 3101377FKY
Reference:
3101377
Name: Met-tRNA formyltransferase, Class: EC2.1.2.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fmt
Sequence:
1 MRVVFMGTPD FSVPVLEALV AAGHEIAAVY CQPPRPAGRG KKDRPTPVHA RALDLGLEVR
61 HPVSLKGAEA QADFAALGAD VAVVVAYGLI LPQAVLDAPR HGCLNIHASL LPRWRGAAPI
121 HRAIMAGDEA TGICIMQMEA GLDTGPVLLR SRTPIRAEET TGALHDRLSA MGADLIVEAL
181 ARLPELTPEP QPEDGVTYAA KIDKAEARVD WTRPAVAIDR QIRGLSPFPG AWTEIAGERV
241 KLLASRLDEG QGTPGEVLDD ALTIACGTGA ISLIRLQRAG KAAQDADIFL RGWPVPKGTR
301 L
SEQDB ID: 3101377FL
Reference:
3101377
Name: 2-polyprenylphenol 6-hydroxylase, Class: EC1.14.13.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ubiB
Sequence:
1 MRGPHNIIRL IRTGATLERN GAMAAVLDAF DAPRPLRILA RALGKPFQWL GFKGDPSLPP
61 ATRALMAMGP AYIKFGQVLS TRPDVVGQDL ADQLRVLQDQ LPPFPRAVAM REVEKELGRP
121 LPEMFSEFSE PIAAASIAQV HRARLADSGE DVAVKVLRPG IERAFRKDVD AFYFAARIVD
181 LFAPGARRLR PMEVIEHFDG VVRGELDLRL ESAAASEFAD NTKEDAGFRL PPVRWSLSAR
241 RVMTLGWADG VPLGDNAALD AAGHNRRDLG ERVLRLFLLH ALRDGFFHAD MHQGNLKVAA
301 DGDIIAYDFG IMGHIDEYTR RVYAEILFGF IRRDYKRVAE VHFEAGYVPA TQDVDEFARA
361 LRAVGEPIFG MDATHISMGR LLSYLFEVTE RFGMETRTEL ILLQRTMVVV EGVARSLDPH
421 INIWQVARPV VEDYIKQSIG PRAVLADLGK TALVVARFGP RLPDLVERAL VAQSQPGLVE
481 KPGRSAAFWP ALGGALIGGG VVLLASLFI
SEQDB ID: 3101377FLA
Reference:
3101377
Name: peptide deformylase, Class: EC3.5.1.88
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: def-1
Sequence:
1 MTVRRCLPWP DKHLRTRAAE VSEITDEIRA IWTDMIDTME AMPGVGLAAP QIGVMLRLAV
61 VDGSSERGRA VRLANPEILH ASIELREHDE ASPNLPGVSA KLKRPRAVTV RFLNEQGQVD
121 RRDFVGIEAT SVQHQIDHLN GRMYFDNLSK VKRDMLLRKA RKLGG
SEQDB ID: 3101377FLB
Reference:
3101377
Name: peptide deformylase, Class: EC3.5.1.88
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: def-2
Sequence:
1 MSVLPILTWP DARLSWRCDP VEGIVPDDLI RDMFDTMYAA KGRGLAAPQV GVMQRFFVMD
61 VGWKEGPPSP MAMINPVIMA AERVPVEMEE VCLSIPGLSV PVTRPKAVTV QWTAPEGDIH
121 MADFDGFEAR CIQHEFDHLN GVVTLDHLDP RARAAMLSAY EGNHS
SEQDB ID: 3101377FLC
Reference:
3101377
Name: peptide deformylase, Class: EC3.5.1.88
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: def-3
Sequence:
1 MKRAILIHPD PRLKKVCAPV ADISDELRAL ADDMLETMYD APGIGLAAPQ IGVLDRLIVL
61 DCVKEESAPA RPLVMFNPRV VAASDETNIY EEGCLSIPEQ YAEVTRPKVV DVEWIDRDGK
121 LQSETFDGLW ATCVQHEIDH LDGKLFIDYL KPLKRQMITR KMQKLKRERA RA
SEQDB ID: 3101377FLD
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPETQMSFD DLIDRHGTFC SKWDMMEPIY GVPAQDGLAM WVADMDFRAP DHVLARLREM
61 TDHGVLGYVD YSKPYTDAIR WWMRNRHDWD VAPEAIFTTT GLVNGVGMCL DTFTQPGDGI
121 VLFTPVYHAF AKVIRNAGRQ VVECQLVNTD GRYEMDFAAY DAQMTGNERM VILCSPHNPG
181 GRVWTQEELR AVADFAKRHD LLLVSDEIHH DLVYPGHTHI PMPNAAPDII DRLLMLTAPS
241 KTFNIAGLHT GQVIIPDPEL RGRFAKRMAA LSLAPNSTGQ MATLAAYSPE GAEWVDGLLA
301 YLDENRRLFD SAIAAIPGLR SMPLEATYLA WVDFSGTGME RAEFTERVEQ QAKIAVNHGT
361 SFGTGGENFL RFNLGTQRAR IEEAIDRLNR AFGDLQ
SEQDB ID: 3101377FLE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTYISKEVS EDLARARIAG LKKMSRLRVE HGGVFYTVLR LWRDGFAVEA ETTPALRGLV
61 DIYEGPNLLY QCLIVASGGE GGEMVYEFKR HTLAQDRAPL DFERAADAPV GLLGKG
SEQDB ID: 3101377FLF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLLIEGIWH DTWYDTKSSG GAFRRSAAQF RNWVTPDGAP GPTGKGGFAA ASGRYHLYVS
61 YACPWAHRTL IFREIKGLSA HIPVSAVHPD MLDQGWTFAP EPQGRTGDRL YGLNYAHQVY
121 TRADPTYSGR VTVPILWDSE RQTVVSNESS EIIRMFNSAF DGLTGNRDDF WPEALREAIE
181 PVNARIYDTV NNGVYKCGFA TTQEAYDAAI EPLFDTLDWL DSHLAQNRYL MGDRLTEADW
241 RLFTTLIRFD PVYHLHFKCN RRRLVDYPNL WAYTRELYQW PGVAGTVHMD HIIRHYHYSH
301 DSINPHRIIP VGPALDLLEP HRRDQRTVA
SEQDB ID: 3101377FLG
Reference:
3101377
Name: response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVLIVESNP ELGTLWQRHL QRQGQQVTLV TSQEDAILAL YRAEFEIIVL DLVLEQGSAL
61 AVADFASYRR PDARIIFVTN TTFFSDGSIF AHSPNACAYV HGDTPPEDLA AMVEHYATVR
SEQDB ID: 3101377FLH
Reference:
3101377
Name: cobalamin biosynthetic protein, Isotype: CobC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobC
Sequence:
1 MNTGFANPSA KPDDPTDPRA RRDHGGGLDG AMRRYGGQRA DWIDLSTGIN PLPYPVGTLL
61 PEDWTALPDH GAFGELIRAA RAFWHLPEAA AVLPAPGASA LIARIPALAD PARVRITQPT
121 YNEHAAAFTA HGWQVVADGP AEARVIVHPN NPDGRIWSEA EAEGALCVID ESFGDVAPET
181 SLAHLAARPG TVVLKSFGKF WGLAGLRLGF AVALPETIAR LNDLTGPWAV SGPALRIGTR
241 ALSDTAWAEE TRIRLAQEAA RLDTLMSAGG VQVLGGTDLF RLYQVDDAAA WQDRLARARI
301 WSRIFPYSDR FLRLGLPPAE GWDRLESAL
SEQDB ID: 3101377FLJ
Reference:
3101377
Name: cobalamin biosynthesis protein, Isotype: CobD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobD
Sequence:
1 MSTALLLGFA MLLDAALGEP EWLWSRLRHP AVLIGDIISV LDDELNEGGH RRLKGVAVTA
61 ILAVGALSVG ALLSLLGPVA EVLICAILLA QKSLAGHVAD VADALRLSLP EARRSVARIV
121 SRDTATMSEP QVARAAIESA AENLSDGVIA PAFWFLVGGL PGLLLYKTIN TADSMVGYMN
181 ERYAQFGWAA ARLDDLLNLI PARLTCGMIV LLSNGWRHWR GIVEDAQRHI SPNAGWPEAA
241 MARALNIALA GPRSYHGEIR HLAWVNEEGR KEIGPREIER AVTLLWQVWA LALGLTLTLV
301 ALAAIF
SEQDB ID: 3101377FLK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRILPQIMAA IVLASPALSQ CGGGFSSFVD GLKAEAVSMG HDAALVDRFF QGAAQDAKVL
61 KADRAQGVFQ KPFVEFSRRL ISQNRLDTGK AMGRKYDAVF DRIEAEYGVS RGVLLAFWAF
121 ETDFGGFQGD FNTRNALITL AHDCRRPELF RPQIFAAIEL YSHGDFDPAR TTGAWAGEIG
181 MVQMLPRDIL ENGVDGDGDG HVTLKTSAPD ALMSGARMLS HLGWRAGEPW LQEVTLPAQM
241 DWSLSGPGKP RSAGEWQAMG VRPRAGDLAD LPASLILPQG HKGPAFLAYP NFDVYFEWNQ
301 SFVYVLTAAY FGTRLEGGQV YDAGNPAPGL DGAGMKALQQ KLQARGHDVG KIDGILGAGT
361 RAAVQAEQAR LGLPADAWPT AELLNRL
SEQDB ID: 3101377FLL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILRIALACT LVATPLMATE WRLKEGDRPL NSSELEALAG RTLTFYDDGR STYSAGGSFS
61 YTYSPANGGG TAFGTYHIAE DGSICTRFRN GLGRCDLYVL NGTRMLLITE TGERYPVRPE
SEQDB ID: 3101377FLM
Reference:
3101377
Name: SMC protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFNRLKLTG FKSFVDPTDL IIADGLTGIV GPNGCGKSNL LEALRWVMGE NRPKAMRGGG
61 MEDVIFAGAS SRPARNFAEV TLLMDNSERL APSGFNDADQ LEIVRRITRD VGSAYKANGK
121 DVRARDVQIL FADASTGAHS PALVRQGQIA ELINAKPTSR RRILEEAAGI SGLYQRRHEA
181 ELKLKGTETN LTRVDDVLEQ LGTQLAQLAR QARQAARYRE IGEQLRLAEG QLLYRRWRDA
241 DEARAKAEEV LRHRTLDASR AEAAARQAEA LRNETEAALP ALREEEAIAG AVLQRMHVQR
301 DTLNDQEQRA RQQIEVLTAR IAQLGRDIER ETGLNRDAGD TIERLEWEAR ELSKAGAGHA
361 DRLAEAAELA REAAAVLQER EDHLSQVTED VARLAARHQS AQRLVEDSRK TLARSEAEET
421 RARGAVEEAH AALDRAGEAY EGAESAAEEA AEAAEAAEEA LAAADELRGE TQAREAEARA
481 QLSEAEGELG AIRAETGALA KLVERDTAEG GHVLDLMRVE PGYEKALGAA LADDLRAPLV
541 EGEGPSGWLD LPDYTQGQPL PEGADPLARH VSGPDRLSRR IAQIGLVDAA TGARLQAALK
601 PGQRLVSLEG DLWRWDGFRA WAQDAPSAAA MRLEQLNRLE ALKQELAQVS ARAEGARAAH
661 GRLSQRLREV TEADRQAREA RRAADQRMAD AARAQSRAEA ERNLAQGRLE TLGLAVTRHK
721 EDAMAARAQL REAEGGLADL GDLDTARASV EDIRHAVEAA RITMLTHRST HDEVRREGEA
781 RTKRSQEVTK DLSGWRHRLE TAGKRIAELE ERKAASEEEL GEAMQVPGEI AEAREDLAEQ
841 TETAEARRAE AADRLASGET KHREAALAER EAARLASEAR EGRAAAEARA EAARETMQAA
901 AERIAEEQQV TPNQLLSKLG VEPDAMPDSD ALEAEVNRHK RQRDAMGAVN LRAEEDAREV
961 QEEFDSLSKE KSDLEEAVKT LRSGIASLNR EGRERLLTAF EQVNSNFAML FRHLFGGGEA
1021 NLVMVESDDP LDAGLEIMCQ PPGKKLSTLS LLSGGEQTLT AMALIFAVFL ANPAPICVLD
1081 EVDAPLDDAN VTRFCDLLDE MCRQTDTRFL IITHHAVTMA RMDRLFGVTM QEKGVSQLVS
1141 VDLKKAEALV A
SEQDB ID: 3101377FLN
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQSGPMLRL LSLIVLLAGC GGPGREFRGL PATRVDVGGS VFDVRVRGNL AEAIRVNPQY
61 APRFGPIRER AGFAMAQVSG CRVVGVLGDQ AVATGVLSCD GRPANWALPA AMLRFDCFEV
121 DSWTSGDTEY TDFECTPY
SEQDB ID: 3101377FLP
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLEEIFATR AGRLKASEIR ELLKLLDQPD ILSFAGGIPD PALFPAEAFA NAFAEVLTPA
61 HQAQALQYSV SEGYLPLRSW LADHMGTLGV PCGANNILIT SGSQQALDYL GKLFLSPGDT
121 ALVGWPTYLG ALAAFNAYEP AYDRLHINTN RLPEDYRAAA EAAGGQVKMA YLSADFANPT
181 GETVDEAGRE RLLDLAETLD CAVIEDAAYQ ALRYDGAPVP PILALEIARK GSIEACRTLY
241 CGSFSKTLSP GLRVGWVVAP QAVIRQLVLM KQAADLHSST INQIAIHRVA ETLFDSHVAS
301 LRATYRRRRD AMLAALARHM PEGVDWTRPE GGMFVWLTLP QGMDGAALLA RSLDTVRVAF
361 VPGRAFFADG SGANTLRLSF SCASEEMIEE GMARLGQLLR AG
SEQDB ID: 3101377FLQ
Reference:
3101377
Name: pyruvate dehydrogenase complex repressor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdhR
Sequence:
1 MPFQKVQPEK LSTSVVRQIE MLILQGILRP GERLPAERDL AERLGVSRPS LRDAVAELQD
61 QGLLTAKAGS GIYVAEVLGS AFSPALIRLF GTHDEAVFDY LSFRRDMEGL AAERAARLGS
121 ESDLKVIQAI YDKMETAHSR QAADDEAQLD AQFHMAIIEA SHNVVMLHMM RSMFELLRQG
181 VFYNRRIMFH QRTTRTAILD QHCAINTALQ ERNPEGARAA VEAHLNYVEQ CLADQQKAER
241 NEAVARQRLE HETGQG
SEQDB ID: 3101377FLR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFVGHLPGAY LIFRVVTPRI ERMAFTAAML GAIAPDLDML RFYFVDGRAF HHHEYLTHRP
61 ILWTGLLLCG VLIGMRSRRI GVPLAFFGAG GLVHMLLDSI AGKIAWAWPV SDFAAPLVVV
121 PATQSHWILS FLSHWTFAVE LGITVLALVL WRWLPRRATA RR
SEQDB ID: 3101377FLT
Reference:
3101377
Name: ATP synthase, Subunit: F0 B, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpF
Sequence:
1 MRNILAPVLS LVLIAGVASP ALAASGPFFS LKNTDFVVTI AFLVFIAVLF YFKVPSMIGG
61 ALDKRAEGIQ SDLDEARKLR EEAQSLLASF ERKQKEMQGQ ADAIVAAAKE EAQRSAEQAK
121 VDLEASIARR LAAAQDQIAS AEAAAVKDVR DRAIAIAVAA AGDVIASSMT AAEANKLIDA
181 GIADAGAKLH
SEQDB ID: 3101377FLU
Reference:
3101377
Name: ATP synthase, Subunit: F0 B', Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATEQTGAVS TCVDSYGSAI GMPQLCFDWF PNQIFWLVIT LVVVFLVLSR VALPRIAAIL
61 AERQGTITND LAAAEDLKAK AAAAEEAYTK ALADARAEAQ RIAAEARAEI QAGLNDAIAK
121 ADAEIAAKAA ESEKVIAGIR AGALESIEAV AKDTAEALVD ALGGKAEAAS VAGAVDQRMK
181 G
SEQDB ID: 3101377FLV
Reference:
3101377
Name: ATP synthase, Subunit: F0 C, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpE
Sequence:
1 MEGDLAHIGA GLAAIGSGAA AIGVGNVAGN FLAGALRNPS AAASQTATLF IGIAFAEALG
61 IFAFLVALLL MFAV
SEQDB ID: 3101377FLW
Reference:
3101377
Name: ATP synthase, Subunit: F0 A, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpB
Sequence:
1 MASEAQAADK AAEGGSLVFH PMDQFIVKPL FGDGAVGMFT ITNSTLWMGL AVLAIIGLLV
61 LSTSKRAIVP GRMQSIAELA YGFIYKMVED ICGKDGVKYF PYVMTLFMFI VTANFLGLLP
121 KSFTTTSHFA VTMVLALAVF LTVTILGFVK NGAGFLSLFW VASAPLALRP ILAIIELISY
181 FVRPVSHSIR LAGNVMAGHA VIKVFAGFAA IAAISPVSVL AITAMYGLEV LVAFIQAYVF
241 TILTCVYLKD ALHPHH
SEQDB ID: 3101377FLX
Reference:
3101377
Name: ATP synthase, Subunit: F0 I, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atpI
Sequence:
1 MPPVTEDDQK QRLTQLEARI EAAKKARETG TKRADASHAQ GELAWRMVIE MVSGLGIGFG
61 IGFGLDSLFG TIPIFLVLFT LLGLAAGVNV MLRSAREIQA KTEADAAKAT ADRDERD
SEQDB ID: 3101377FLY
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPLDDVFS ALADPTRRAI LAMLLEDDMA VTDVAEPFEM SLAAISKHLM TLTRAGLITQ
61 EKRGRVKWCK LEPNALRQAS VWMQGFGQFE PVNLDAFERF LAAELGEDAQ PGG
SEQDB ID: 3101377FM
Reference:
3101377
Name: ubiquinone/menaquinone biosynthesis methyltransferase, Isotype: UbiE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ubiE
Sequence:
1 MRGTARPMSD RSDKTTHFGF ETVPEHEKAG RVQGVFGSVA SKYDVMNDVM SMGIHRVWKD
61 AMMDWLAPRP GQRLLDVAGG TGDISFRFLK RAGHGHATVL DLTEPMLVEG RKRAEAERMA
121 DSLDWVVGDA MALPFEDNTF DVYTISFGIR NVTRPQEALN EAYRVLRPGG RLMVLEFSQL
181 PNDGLQKLYD LYSFNVIPRM GQLIANDSAS YQYLVESIRN FPNQETFLGM VQAAGFGNAK
241 YRNLSMGIAA LHSGWKI
SEQDB ID: 3101377FMA
Reference:
3101377
Name: integral membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGGLSPEGRG HLAMLCFSAL VAGSFSLGSM VANEIAPAAL NAVRFGIAAV VIGVAAAATT
61 GIPRAALRAP WRYLLLGGLF AAYFVLMFEG LKTAPPVSAA AVFTLTPVLS AVAGWLLLRQ
121 VTTPRMALAL AVGAGGALWV IFRADWAALW AFRIGQGEIV YFWGCVAHAI YTPLVRRLNR
181 GEPAVVFTLG MLVAGCLLLT LYGWGDLRAT DWATLPPIVW IGLLYVSICA SAMTFVLLQF
241 ATLRLPSAKV MAYTYLTPTW VIGWEIALGN GAPGGLVLVG IAMTVVALVM LLETPARRR
SEQDB ID: 3101377FMB
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MENWDEVRTA YQVARMGTVS GAAEVLGVHH ATVIRHIDAI EARLGVKLFQ RHARGYTPTE
61 AGLDLLRVAQ ATDDQFSQLV GRLKGVGDDV SGELVVTSLE ALAPLVVPVL GAFQRKHPGL
121 IVRYLTGARL FRLEYGEAHV AIRAGRVPDQ PDNVVQPFID QEVGLYASRG YVARRGMLKG
181 DADLKNHEFV GSDDENSRAP FHIWLRQNVP AEAISFRCSD TYSAGHAVRA GAGIGFVSRW
241 AAARDPDLIE MHPALEEWAG KLWLVTHVDL HRTPKVQTFL KFLKQAAREW AV
SEQDB ID: 3101377FMC
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKIGILGGV GWPSTIDYYR AIAQGAGRFF AARGHGAPLP IPPMTIESVT QAHTRALRGT
61 PGDEASWAAF DAVFRNALLT LQGAGCDFAV IASNTPHVRL HAIRKGVDMT ILSIFDATAR
121 ATAETGATRA LVLGTAVTMQ ARNYADALTA HRVTANQTLP LEDIAEMQAL IDEELNTGVS
181 ANARPRLLAY CDRHAEPGAA ILLACTELPL IFPDHVDDIV FRAGGHLFVN PSAAHVAAAL
241 DMALADES
SEQDB ID: 3101377FMD
Reference:
3101377
Name: YbaK/Pro-tRNA synthetase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGSPTMDAS SAYQDTLPVS SDALLGQLDD WGLAYRLYTH VPLRTVEDAK AVEGELTRPG
61 ERAFRIKNLY LRDKKKRNYL VTLEQDRAVD LKALGVALGA GNLSFGSSDR LMQHLGIRPG
121 AVSPLAMITG VGQEVRLIMD AAAREAEVIY MHPLVNDRTV AMARADLLAF LERIGCEVTW
181 LDGSERA
SEQDB ID: 3101377FME
Reference:
3101377
Name: quinolinate synthetase complex, Subunit: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nadA
Sequence:
1 MFDLPAMRAN LADKYDLAPS PTLAAEMSAE YARMARVVTP ADWAIHAPYV RAINQLKAER
61 GAVILGHNYM TPEIYHGISD FVGDSLQLAI EATRTDADVI VQCGVHFMAE TSKILSPDKT
121 VLMPDMEAGC SLAESITAEG IAQMRAKYPG APVVSYVNTT AEVKAASDIC CTSSNAAQIV
181 AALPEHTIIM TPDQYLAQNV AAQVPQKNVV WWEGSCIVHE QYSARDLRDF REWNPGTRLI
241 AHPECPPDVV AEADFSGSTS GIIDYVTREK PQKALLITEC SMASNIADAL PEVDFVGPCN
301 MCPYMKKITL EKVLYALDTM TGQVEVDPEV ARQARLAVQR MIDLSRQLGV
SEQDB ID: 3101377FMF
Reference:
3101377
Name: Asp oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDLRTDRVV IIGAGLAAIY AALKLAPHPV LMISPDPLGH GASSAWAQGG VAAAMDPADT
61 PEAHARDTLR AGAGTVLQEV ADYVTRAARA HILDLTDLGT AFDRTRDGGY VMSREAAHSA
121 ARVVRVKGDQ AGAEIMRALI AELRQTRSVQ VLEGAQVTRL LVEAGRVSGV CLTSAAPEGS
181 APVTLRAPAV LLAAGGAAGL YAQTTNPARI RGQALGMAAR AGARIADGEF VQFHPTAIAT
241 GADPAPLATE ALRGEGAILI DRHGQRFMPA LHPDAELAPR DVVARAVYLQ TQAGNAPALD
301 TRAAIGAHLP TLFPAVAQAC AEAGIDPLSA PIPVAAAAHY HMGGVAADLD GKCSLPGLWV
361 CGEAASTGLH GANRLASNGL LEALVFARAC ARDIARQVRQ TVAARVDISF APGGDAPDAQ
421 TVAELRRIMT DHVGVVRDVD GLRRALRAIA QIEGAHPPCD ALANMTATAT MIAAAALMRQ
481 ESRGAHYRTD FPQAAPGPGQ RSDLTLEQAL TLRNTL
SEQDB ID: 3101377FMG
Reference:
3101377
Name: nicotinate-nucleotide pyrophosphorylase, Class: EC2.4.2.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nadC
Sequence:
1 MTQGPAMTHA PLPDLILEPL VRAALMEDLG TYGDITTRTV IAPGTRYCAR LNARAAATVS
61 GMQIAALAFR LVDPALRVET LVADGQTCAA GDTLMVIEGE AAAILSAERV ALNFVGRLCG
121 IATLTAALVA ETHGTNARIT CTRKTTPGLR LVEKQAVLHG GGFNHRYSLS DAILIKDNHI
181 AAAGGIRPVL EATRARASHM VKVEIEVDRL DQLEEVLAVG GADAVLLDNM DTETLARAVR
241 MAKGRLITEA SGNVTLDTVA AIAATGVDYI SSGALTHSYR TVDLGLDF
SEQDB ID: 3101377FMH
Reference:
3101377
Name: signal recognition particle protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ffh
Sequence:
1 MFENLSERLS GVFDRLTKQG ALSEEDVKTA LREVRVALLE ADVSLPVARD FVKAVQDKAT
61 GQAVTKSVTP GQQVVKIVHD TLVDVLRGAE DPGKLKIDNP PAPILMVGLQ GGGKTTTTAK
121 LAKRLKEREG KKVLMASLDV YRPAAMDQLA VLGAQIGVDT LPIVPGQKPV DIAKRAKQQA
181 MMGGYDVYML DTAGRLHIDQ VLMQEVEDVR NVVTPRETLL VVDGLTGQVA VEVAEEFDAK
241 IGISGVVLTR MDGDGRGGAA LSMRAVTGKP IRFVGLGEKM DALETFEPER IAGRILGMGD
301 IVALVEKAQE TIEMEQAERM MKRMAKGQFN MNDLKMQLEQ MIQMGGMQGM MGMLPGMGKM
361 AKQMDAAGLD DRVLKQQIAL IQSMTKKERA NPALLQASRK KRIAAGSGME VSDLNKLLKM
421 HRQMADMMKK MGKMGKGGML KQAMKGMFGK GGTPADMAEM AKGMDPKALE AAAKAMGGGK
481 GLGGGLPGGL PGLGGGMGLP PGLSGLGKKK
SEQDB ID: 3101377FMJ
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPIPTISTE RLTLRAPEQR DFPGFAAFFA SERSKFVGGP VPAEQSWRML AVELGHWQLR
61 GYGRWAVEET ATGRFAGIIG LWNPEGWPEP EIGWDLMDGF EGKGYATEAA RAARDYAYDV
121 LGWPTAISLV APGNDGSRRV AQRLGATQDG LFTHERFGTL EIWRHPAPSE LSDGGMEAYA
SEQDB ID: 3101377FMK
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDLQIPTLT TDRLILRAPE ARDFEGVATF FADAERSWGF GGPLSRNEAW RWFASMIGHW
61 VLHGYGFWMV DTREGEPVGF VGIWSPEGWP EPELGWVVYQ GAEGKGYARE AAEEIRRYAY
121 AVLGFETLSS NIIPGNARSV ALAERMGAQY ERSFENVTHG TEMVYRHPGP DDLAEGAA
SEQDB ID: 3101377FML
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIPTLHTER LTLRAPQLAD FEHWAAFFAS PRAVHERGMM DRAAAWRVWA SDVAIWTLRG
61 YGPFGVELRD TGTYVGEVGI YEPDGYPGPE LGWFVIPEAE GKGYAAEAAR AVMIWARRNF
121 GWDQLTNIID PANQRSIALG LRLGGVIDPD GIGEDPGDVV IAHDLRGLA
SEQDB ID: 3101377FMM
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSIPVIET ERLILRGPRE SDFEAFAAFG ASDRSRFVGG PFPRFRSWGG FLATYGHWAL
61 RGYGMWMVEE RATGATAGRI GFIFNDGWDE PELGWHIFDG FEGKGYAYQA ASAARAHGAQ
121 HFGLDGVISY IDPANTRSLR LAERLGAQYE RDGEVAGHPC QVWRHPHQGA AA
SEQDB ID: 3101377FMN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHTIPVIET RRLILRGPEP EDYPDFKSTF TSYRARFMGG PLNPYEAWML YAAEIGHWQI
61 RGYGMWMIHD KVTDETYGMA GGWKPAKWPE AEIAWVIWPD AAGKGYALEA THAARKHFYR
121 YLGWETAVSY IDPKNLDSIR LAERLGAKKD PEAPTIDGND AVYRHPSPAK LDGTQLAHGI
181 DMEIAHYADP LFKPKGWAID
SEQDB ID: 3101377FMP
Reference:
3101377
Name: chorismate mutase, Class: EC5.4.99.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDPVARAAE LLKGHRASID RLDAILVYTL GERFKHTQAV GKLKAEHDLP PSDPVREAQQ
61 IERLEDLAKE ADLDPDFAKA FLNFIIQEVI RHHRKHQE
SEQDB ID: 3101377FMQ
Reference:
3101377
Name: ribosomal protein S16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsP
Sequence:
1 MAMKIRLARG GSKKRPFYRI VAADSRMPRD GRFIEKLGTY NPLLPKDSEE RVKMDVERVQ
61 YWLSQGAQTT DRVARMLEAA GVVGKTERSN PNKAVPGKKA KERAEEKAAK AAAATEAAAE
121 E
SEQDB ID: 3101377FMR
Reference:
3101377
Name: cobalamin biosynthesis protein, Isotype: BluB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bluB
Sequence:
1 MRDQSFSDDF RTQFDLLMRL RRDVRRFRTD PVDEAVLTRC LDTFRLAPSV GLSEPWRVIR
61 VESDAARAAA LENYQSANGE ALKGYSGERA QQYSQLKLSG MQEAPVQLAV FCDDATAKGH
121 GLGAGTMPEM RRYSVVSAIT LFWLMLRAEG LGLGWVSILD PDRLCRDLRA PETWRLIGYF
181 CIGWPQECSD IPELETAGWE VRDRRLTVEI R
SEQDB ID: 3101377FMT
Reference:
3101377
Name: 16S rRNA processing protein, Isotype: RimM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rimM
Sequence:
1 MSDLICVGSV AGSFGVRGEV RLKSFCAVPE DIEMYSPLTD ESGTARYPIV LTRAIKNGFA
61 AHLGGVETKE EADALKGLRL YTQRDRLPSL PDDEFYHTDL IGLEVFDTGG TLLGKVISVQ
121 NHGAADLLEI GGAGLKSPVL LPFTQAAVPT VDLEQRRIVA DPPEGLF
SEQDB ID: 3101377FMU
Reference:
3101377
Name: ribosomal protein L31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmE
Sequence:
1 MKKDIHPDYH MIDVKLTDGT VIQMKSTWGK EGDTLSLEID PSSHPAWTGG SSRLMDTGGR
61 VSKFKKKYEG LGF
SEQDB ID: 3101377FMV
Reference:
3101377
Name: ribosomal protein L19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplS
Sequence:
1 MDLIAQLEAE QIAALGKDIP DFKAGDTIRV GYKVTEGTRS RVQNYEGVCI SRKNGSGIAG
61 SFTVRKISFG EGVERVFPLY STNIDSITVV RRGRVRRAKL YYLRARRGKS ARIAEVANYK
121 PKADAEA
SEQDB ID: 3101377FMW
Reference:
3101377
Name: glycosyl hydrolase, Isotype: family 25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPLILLFVL LSLMAACGRR APEPEPVPAP DPMRAELAQL VTYPKFGDAD PHPWDGRAPQ
61 SYPIHGIDIS RWQGNIDWAT ARAAGVNFAF IKATEGGDVA DPKFAEHRRG AQAAGVPWGA
121 YHYYYFCRPA EEQARWFIRH VPRGADLPHV LDMEWTHRSR TCPLRPEGAK VRAEARKFLD
181 LLEAHYGRRP IIYTTVDFYR DTGIGQLRDT EFWLRSVAGH PRQVYPGAYW TFWQYTGTGL
241 VPGIEGKVDI NVFRSAPDIW LRWKAGQIG
SEQDB ID: 3101377FMX
Reference:
3101377
Name: tRNA (guanine-N1)-methyltransferase, Class: EC2.1.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trmD
Sequence:
1 MTPTPELHGV WQARIITLFP QAFPGVLGES LTGKALQDGL WQLHTTDLRR FGVGKHRNVD
61 DTPAGGGAGM VLRPDVLGAA IEATMQGTSS NWPLIYLSPR GRPMDQALMQ SLARCDGVTL
121 LCGRFEGVDE RVLEHYGIQE VSLGDFVMTG GEIAAQALID ATVRLLPGVL GNQASTEEES
181 FSSGLLEHPQ YTRPAEWMGR PIPEVLMSGH HGKVAEWRRA QSEEITRRRR PDLWQRHQAT
241 KDD
SEQDB ID: 3101377FMY
Reference:
3101377
Name: methyltransferase-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFRERRFYM FYGKLQGENG DRFRAALQTM QELFGSVYAS DNLIGLQRAG GFREDKKFVE
61 TLRRNAQTQQ ELSIAWRLHT LLWAAQNVMH LPGDFVECGV WKGFCFAFLT DYLDFAKSDK
121 TLYLYDTYQG IPEAMNSEKR SNQVYEKDIA QDPNAILKVV QQRFANVPNA RIVQGMVPDS
181 FAEACPERIA LLHIDMNSAA SEIAALEALF DKVVPGGMIV FDDYGWTGYA AQRHAENAFM
241 AARGHTVLEI PTGQGLVIKH
SEQDB ID: 3101377FN
Reference:
3101377
Name: formamidopyrimidine-DNA glycosylase, Class: EC3.2.2.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mutM
Sequence:
1 MPELPEVETV RRGLAPAMEG AVIARAEVNR PDLRWPFPDR MAERLTGQRV ERLRRRSKYI
61 LADLSGGETL LIHLGMSGRM TVSGDPLGQF VHDHPAAQKH DHVVFHMDNG ARITFNDPRR
121 FGAMDLMATA TADEHKLLMV LGPEPLGNDF HEDYLVAALK GRNTPVKSAL LDQGIVAGLG
181 NIYVCEALFR AGVSPRRKAG QIAAARVSAL VPIIRQVLSE AIEAGGSSLK DFRQADGELG
241 YFQHSFDVYG REGEPCRRAG CDGTVQRITQ SGRSSFYCAQ CQR
SEQDB ID: 3101377FNA
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLHLMSHAL CPYVQRAAIS MLEKGVSFER TDIDLAKKPE WFLAISPLGK TPVLLDNQQA
61 IFESTAILEY LEDTQSPPLH SKAAITRAQH RGWIEFGSSI LNDIAGLYNA QTEDAFDQKT
121 AALEAKFAQL ERQLGEGAFF AGNAFTLVDT VFAPIFRYFD TFDEIADFGI LLGKEKVAAW
181 RKELAARPSV KQAVSANYPS LLRVFLLNRN SHLSQLMKRQ LS
SEQDB ID: 3101377FNB
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPSEQTTRA WTSLLSVGQA LLGDIEAELQ THGLPKLSWY DALFEIEKAG ADGIRPYELK
61 ERLLLPQYGT SRLLDRIAKA GLVTREDVIG DGRGQIIRLT PKGIETRKEM WPIYAEMLIK
121 SVQQKLSQPE LDELVRLLGK LASTNKLRSS IP
SEQDB ID: 3101377FNC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKGSYPPID AARENLWLRE SACRLQLYPR SKLPLGWVGD AASRGEISEE LQERLSWIGV
61 SVAVTLIGFS TLMLGTFSRF GLWPQLIAAF AGLIALEGMR STATAFVGSH PGLWWVQHAP
121 ALGGIALSIL FLKLAGRPLR LRRYPDTGSV
SEQDB ID: 3101377FND
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERVNASLRR IPVWLIYMTG ALPPPVWLWM GATGLLGVDP AKAIEHRLGE LALQALILGL
61 AVTPMRRLLG VNLIKFRRAI GVLAFYYVSC HLLIWLVLDV QIPAQIWADI LKRPYITIGM
121 AGFALLLPLA LTSNNWSVRR LGPAWRQLHR LVYAAVLLGA VHFLMLVKGF QIEPLVYLGL
181 VVILLALRLP VARRRLAL
SEQDB ID: 3101377FNE
Reference:
3101377
Name: molybdopterin-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHRWINDLT PADITPRGAW MNRRQVMAGM AGAGLAAFAG SAQAETLEPN SWEEITSYNN
61 FYEFGTGKDD PAAYAHLLKT VPWSIKIDGM VERPGDYDFQ DILSEMTIEE RIYRFRCVEA
121 WSMVIPWNGF ELADLLAMAG VQEGAKYVAF ETLYRPEEMP GTRYPVLEWP YREGLRLDEA
181 MHPLTLMATG IYGKPLPNQN GAPLRLVVPW KYGFKSIKSI VRITLTDREP PASWNMAIPN
241 EYGFYSNVNP EVNHPRWSQA SERRIGGGLF AKRQPTLMFN GYEKEVAGLY QGMDLAKYF
SEQDB ID: 3101377FNF
Reference:
3101377
Name: Glu synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHINIYRSF RMGFAYNAIE VMAFVFVSVI GLMMLTAVVL FIVDRFQTGD AIRRNYPVIG
61 RFRNIFTELG EFFRQYFFAM DREEMPFNRA QRNWVYNASE AKGNTVAFGS TRNLNIPGTP
121 IFMNAPFPPL DDQFGASEPL VIGPTCRQPY SAPSIFNISG MSYGAISKPA VLALSKGAKA
181 AGVWMNTGEG GLSPYHLEGG ADIVFQIGTA KFGVRDAEGN LSDDKLREVA AHPQVKMFEI
241 KLSQGAKPGK GGILPAAKID AEISQIRGVP MGMDAISPNR HREVDDFDGL LDLIAHLREV
301 TGKPVGIKTC MGSADPWFDF FRRIRERGAD SAPDFITVDG GEGGTGAAPM PLIDLVGLPL
361 REALIRMVDL RDLSGLHDRI RIVASGKLVA PGDVAWAICL GADFITSARG FMFSLGCIQA
421 LKCNKNTCPT GITTHIPSLQ KGLVVHEKEK RVAAYARSVI HEVETIAHSV GVPEPRLMRR
481 RHVRIVCDDG TSVQMDDLYP SVKSDAEGLD RARGNRQFED GLRRLGVV
SEQDB ID: 3101377FNG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKLLYILMW RKAAVLFPIQ TEGEPLAVQP TRPLWERAMK QMLLGAVIAL TAGAATAQDA
61 VTYTTTDTFE DVTFGLESAI VGRGLVIDSV SHVGEMLERT RADVGSDVVL FDHAEVFSFC
121 SAALSRKVME ADPMNVVFCP YGIFVMQQPG SDAITIGFRQ FPEGPMQEVQ SLLDNIVREA
181 IGE
SEQDB ID: 3101377FNH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGVFMRIPCT RQECAMTRVP PFIITALLAS MTGAVALAGN ESRSIAYSLP GGLIEVVADF
61 SENSIYWCGA GDHALNKMRK PGNQRLYVWK GPSPSIAQPG GRAVTFGFTP PPQGASPALT
121 NDVGIIGNTL SVSQAKKTCD ERTSSG
SEQDB ID: 3101377FNJ
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCFSATASFV AGAALIAGGT VAIRKSADLG PRFLGFAVFP FFFGVQQLSE GLLWLTLDGP
61 GPVAPGAAAL VFLFFAYWFW PLWVPLSSAL VEPDPFRRRI FWGLSAFGFS LGAVLFLPVL
121 ARPETLDIYL VKHSIQYENP SMFPGETAKI VARLIYAVVI CPPLVGSSHP QIRIFGWLIL
181 ASVVAGFVFA AYAFTSIWCF LAAIISGYIV YMMTAIGRED ALVDPSRRNL S
SEQDB ID: 3101377FNK
Reference:
3101377
Name: ATP-dependent clp protease, Isotype: ClpB, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: clpB
Sequence:
1 MDLSKFTERA RGFVQAAQTI ALREGHQRLA PEHILKALMD DDQGLASNLI ARAGGASKRV
61 VEALDVALSK IPKVSGDAAQ VYLDGQTVKV LDEAEKVAKK AGDSFVPVER VLMALCMVKS
121 KAKEALDAGE VTAQKLNEAI NDIRKGRTAD SASAEEGYDA LKKYARDLTE AAAEGKIDPI
181 IGRDEEIRRS MQVLSRRTKN NPVLIGEPGV GKTAIAEGMA LRIVNGDVPE SLRDKKLLAL
241 DMGALIAGAK YRGEFEERLK AVLTEVTEAA GEIILFIDEM HTLVGAGKSD GAMDAANLIK
301 PALARGELHC IGATTLDEYR KYVEKDAALA RRFQPVLVEE PTVEDTISIL RGIKEKYELH
361 HGVDISDSAL VAAATLSHRY ITDRFLPDKA IDLMDEAASR LRMEVDSKPE ALDQLDRQIL
421 QLQIEEEALK KENDAASQDR LATLQKDLAE LQEKSAEMTA QWQASRDKMN AAQSVKEQLE
481 RARAELEIAK REGNLARAGE LSYGIIPELE KQREEAEAGE DTGLKAEEVV RPEQIAAVVE
541 RWTGIPTSKM LEGEREKLLR MEDELHKRVI GQGTAVTAVA NAVRRARAGL NDENRPLGSF
601 LFLGPTGVGK TELTKAVANY LFDDDNAMVR IDMSEFMEKH AVARLIGAPP GYVGYDEGGV
661 LTEAVRRRPY QVVLFDEVEK AHPDVFNVLL QVLDDGVLTD GQGRTVDFKQ TLIVLTSNLG
721 SQALSQLPEG ADSAQARRDV MDAVRAHFRP EFLNRLDETI IFDRLKRADM DGIVTIQLGR
781 LAKRLAQRKI VLELDEPARK WLADAGYDPV YGARPLKRVI QRDLQNPLAE KLLAGEIKDG
841 DTVAITAREE GLVIGDRVVS SSRPRPDDAV VH
SEQDB ID: 3101377FNL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEAPMQITNV EISQYQVCPN TARHSASVCM TLADRVVTLF CSLELPEGIS AIARAQAFVG
61 DAMRQLRRMP EFRSGKQQLS LDDQALPAVA
SEQDB ID: 3101377FNM
Reference:
3101377
Name: orotidine 5'-phosphate decarboxylase, Class: EC4.1.1.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrF
Sequence:
1 MTDRMLADDR LIVALDVPNA VAGLALAERL GDAVSFYKIG LGMLTGGGLA LANELKQEHG
61 KRIFLDMKLF DIGNTVEAAV RGLSQFDLDF LTVHGDPHVV RAAKEGAAGK DLKILAVTIL
121 TSLNRDDLDA SLIKPGDVHD LVLERAARAF EAGADGVIAS PQEAAAIRAL PEAAGRLIVT
181 PGIRPAGADL GDQKRVATPA NAIADGVDHI VVGRPVVHAP DPRAAALSIL AEMTSPQAVA
241 PNRS
SEQDB ID: 3101377FNN
Reference:
3101377
Name: NUDIX domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTASAFSG AKLALFLGAE LLVIRRDDRP DIPFPDHWDL PGGGREGDES PLDCALRETR
61 EEVGLSVPAD RVGWSLSYLR PMGRMWFFTA HLPAGYVDQI RFGNEGQGWR LMAPTDYVRH
121 ARAVPHFAEH LRLYLGSSDY NQARSGGER
SEQDB ID: 3101377FNP
Reference:
3101377
Name: DNA polymerase, Isotype: IV
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAASGLCRD CFSRTGSARR CPSCGSPRVL RHPELDSLTI AHMDCDAFYA SVEKRDNPDL
61 ADKPVIIGGG KRGVVSTACY VARIRGVRSA MPMFQALKLC PEAVVIKPRM SVYAEVSKQI
121 RALMDELTPV VEPLSLDEAF MDLSGTQRLH GHPPAVMLAR LVKRMKDELG VTGSIGLSHN
181 KFLAKVASDL EKPRGFSVIG RAETAEFLRD KPVRLIWGIG PAAQESLERA GIRTFTDLLR
241 WEQEALVARF GAMGQRLWHL ARGEDRRRVS AHDPIKSISN ETTFFEDTGD ADVLDGHIWR
301 MAEKVADRAK ARGLAGRVVT LKLKRANHRV LSRQQSLRDP TQMADRIYRT ARALFDQLGD
361 QGPYRLLGCG LSHLCPETEA DVSGDLLDPQ AAQRARAERA TDAIRKRFGA DAILKGRGMR
SEQDB ID: 3101377FNQ
Reference:
3101377
Name: DinB-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MISAEFCRVM ARYNSWQNKS LITAAEALTH AARWQERGAF FGSIAATLNH LYWADALILA
61 RLTGNERPQD TIRHSLTDPA DWQDYKTRRQ HRDREIESWA DGLKDADLNG TLAWYQADGA
121 TRITASGALC AAQLFNHQTH HRGQVHAMLT AAGAKPGVTD LTALT
SEQDB ID: 3101377FNR
Reference:
3101377
Name: For-Glu amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNTAYHLTL PAARTSSVVF ASPHSGARYD PPFLAQTVLD DHAIRSSEDA FVDQLFDCAP
61 EFGAPLLRAA APRAYLDLNR SCEELDPALI EGVRKGGHNP RVASGLGVIP RVVAGGRAIY
121 RGKLSRAEAE QRLQAIWHPY HARLQHLLNE AHAAFGQAIL IDCHSMPREA LENSVGKAAG
181 KPDVVLGDRF GASASPEIVD RVEAAFTAAG LHVVRNTPFA GAYVTQAYGR PSRRQHAIQI
241 EIDRGLYMHE ATIRPNGNFS AMRELLRDVV AEICGFASLP LRLAAE
SEQDB ID: 3101377FNT
Reference:
3101377
Name: ribosomal protein L36
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmJ
Sequence:
1 METTMKVRNS LRSLKSRHRD CRVVRRKGRV YVINKTQRKF KARQG
SEQDB ID: 3101377FNU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGWDMVVRF LVFALALICG QSLLAAPSAE TIRASLLAHD FDMLTADLEA SQAAFDAGDI
61 SDEDLRRLFE VFTSSSPDVI EAVAEWERKS PDLPYATTAR GWSLYITASR IRGEDFARDP
121 YPEALRLHRE MLERAFLLAM RAYGMDPSLI PASDLIIALG NSTSRQEQAL VVVERVMSEQ
181 PNAGTLRRAI WLAHPGWGGS SELADALCAF FGPNASPNGA DLTRQCITYA SREIFGHRME
241 EIRTWMKEDP DPWYDYYRVW ATLFDKSPNA EDLAFAHRYF QDSEVRDLRL SKMFDQRYSM
301 RPGLSPVHHL VLERSKDWAR AVLETDPYEL SALDVLLSDT VRVTKGADNN WMFTPSGSPT
361 RDERLDYMRR RLYAAPYNPD FWEDYARFLN NENKQAGYPV EGIFATDTLM INAIVYSKHR
421 PDWLGDFVER KFKQLEFLEW ITGQGKPDWD RFIAETDRNA QIICPLIRAN RLFDAMRLAG
481 LENRRHKDLS VFKQQKLRAE TERAASEGQC ENERLAPIEA LWFTPVEVDL AAMG
SEQDB ID: 3101377FNV
Reference:
3101377
Name: arylsulfatase, Class: EC3.1.6.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: atsA
Sequence:
1 MSRKPNIILI LADDLGFADL GCTGSEIRTP NIDGLARDGA LLTAMYNCAR CCPTRASLLT
61 GLYPHNAGIG HMGADLGTPA YRGFLRNDCA TIAEHLRAAG YRTCMSGKWH VGGDFMAREV
121 DSWRVGDVDH PTPRQRGFDR FYGIVDGVTH FFSPHYMLED DTRVETFPDD FYFTDAITDK
181 AIGMVEEAVE MEQPFFLYLA HTAPHWPLHA HPEDIARYDG VYGRGWDALR SSRHETMNAM
241 GLFQTNWQIS PRDADVCPWE AAPHKDWEAR KMATYAAMVD RMDQSIGTLL AALKRMGQFD
301 NTLILFLSDN GGCAEFMAED GWAKFFPDTT HDGRHIEMGN RPEIMPGSAL TYQSYDKPWA
361 NVSNAPFRKF KHYVHEGGIS TPLIAHWPGR IAAPVPLHAA CHVVDILPTI LEAAGAPPIA
421 ELGGHGMQPL QGESLLGLLR GKKWEREQPI FFEHEGNSAI RLGQFKLVRL HGQDWELYDI
481 EADRTELNDL IRGEPDRAKA LVAEYQDWAD KTGVLDWNIA LPRLLAAWQM DNAEG
SEQDB ID: 3101377FNW
Reference:
3101377
Name: Fe(III) ABC transporter, Subunit: periplasmic Fe(III)-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTISVGLTES RETPMLKTTT AIALALIATS AIAEGELNLY SSRHYDTDER LYTDFEEATG
61 IRINRIEGKA DELIARMQAE GANSPADVLL TVDTSRLARA KEAGLLQAID SAVLEDRIPA
121 NLQDSDNQWF GFSQRARLYF YDKAGVSAPP ATYLDLADPA YKGQVCIRSS TNTYNQTLLA
181 AIITHHGEDV ARDWAESVVA NMAREPQGGD TDQLRGIVSG ECGIAVSNSY YFARALRSDV
241 KGLSGEIDKI GIAFPSQDAE GAHMNLSGGG VAAHAPNRDN AVKFLEYLAS DQAQVYFSNG
301 NDEYPAVTGV DLADNVAALG EFKADEVNLS EVAANIPMAQ KIFNEVGWK
SEQDB ID: 3101377FNX
Reference:
3101377
Name: Fe(III) ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEPQNPPGPA MADTRYAAHG SRRRLSSGTR LLGGLAFAIA AACLLPMVAV ALAALTGGTD
61 TLAHLLETVL PGYAATTLLL VALVAAGTFA VGVGAAWLVT MTRFPGVRLL EIALVLPLAF
121 PAYVLAYAYT FVLDHPGVVQ TTLRQVTGWG PRDYWFPEIR STEGAAVMLI LVLYPYVYLL
181 ARAAFLQQSA SAFLAARALG TGPWVAFWRV SLPMARPAIA GGVLLAVMET IADFGTVAYF
241 GVQTFATGIY TSWFSMADRA AAAQLALCLL GFALLLAVAE RTQRGKARYY QSGRRHAALP
301 AGELKGWQAA GAFTLCAVPV VLGFVLPVVI LVQMGLESEQ NLLSRRYVGF IRNSLTLAGT
361 AAVVTVTAAI CVGFFQRLRP GRRSDGAAYL ARLGYAVPGG VIAVGLIVPF AAFDNALDAW
421 MRAQFGLSTG LLITGSIWLL IAAYMVRFLA AALGAYEGGQ SMVHANMDAA ARSLGQGPLG
481 TLRRIHLPIL TPSLMTALLI VFVDVMKELP ATLIMRPFNF DTLAVQAYRL ASDERLEGAA
541 VPSLVILAMG LLPVILICRQ VGRGR
SEQDB ID: 3101377FNY
Reference:
3101377
Name: phenylacetate-CoA ligase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHFDPLETR TDDQRAADLA SALPQQIARA KTAPGFARLL ADVDPAAITD AAALATLPVL
61 RKSELSRAQG EHPPFGGFTV KPAHGFAHVF QSPGPIYEPG GTDHDWWRMG RFLHAAGIGQ
121 GDIVQNCFGY HLTPAGMIFE NGARAVGAAV LPAGTGQTEL QVTAARDIGC TAYAGTPDYL
181 KVILDKAEEM GVALKFTKAA VGGGALFPSL RKEYADRGIS CLQCYATADL GNIAYESAAM
241 EGMIVDEHVI VEIVTPGTGT PVAPGEVGEV VVTSLNPDYP LIRFATGDMS AVLPGHSPCG
301 RTNMRIKGWM GRADQTTKIK GMFVRPEQVA ALVDKHAEIV KARVIATRVG EMDAMTVQIE
361 SSGGDDAAYA RSVAEVLKLK GAIEVVAPGS LPKDGLVIED QRRYD
SEQDB ID: 3101377FP
Reference:
3101377
Name: enoyl-CoA hydratase, Class: EC4.2.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAFETIIVEV EDHVALIRLN RPDALNALNT QLLGELCTAL EEADGNDKVR CIVITGSDKA
61 FAAGADIREM SQKTYVEVYS ENLFAAANDR VSAIRKPIIA AVAGYALGGG CELAMLCDFI
121 IAADTAKFGQ PEINLGVIAG IGGTQRLTRL VGKSKSMDLN LTGRFMDAEE AERAGLVSRV
181 VPAKKLVEEA LSAAQKIAEK SMISAYAVKE AVNRSYETTL SEGLLFERRV FHSMFATEDQ
241 KEGMAAFLEK RAAQFRDK
SEQDB ID: 3101377FPA
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDAAKTTDT QVETLLEVNN IEVIYNHVIL VLKGVSLTVP KGGITALLGG NGAGKTTTLK
61 AVSNLLHSER GEVTKGSVKY RGETIHELDP AALVTKGVIQ VMEGRHCFEH LTVEENLLTG
121 AYTRKDGSAN IQRDLELVYN YFPRLKERRR SQAGYTSGGE QQMVAMGRAL MSRPETILLD
181 EPSMGLAPQL VEEIFEIVRD LNEKEGVSFL LAEQNTNVAL RYAHYGYILE SGRVVMDGPA
241 KELRENPDVK EFYLGMSDDG RKSFRDVRSY RRRKRWLS
SEQDB ID: 3101377FPB
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain amino ac
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKMKLATVAL GALMAAGPAL ADLTFPSLSY RTGPYAAGGI PFADGYADYF TLLNERDGGI
61 GGVKANVLEC ETGYNTEKGV ECYESTKGQG ALVYQPLSTG ITYQLIPKAT ADGIAIHSMG
121 YGRTSAKNGN VFSHVFNYPA NYWDGASGAV NYLLEINGGD IKGKKIALVY HNSAYGKEPI
181 RTLEELSKKH GFDLSTLPVD HPGQEQKSQW LQIRRDKPDY VLMWGWGVMN QVAVQEAANI
241 RFPMENFIGI WWSGSENDVL PAGDAANGYK ALTFHNVGTA FPLFDDLQKY VIDAGKAAGA
301 GDQVGTVLYN RGLYAAMLAA EAAKKAQEIS GKADITAADM RDGMEALEMT EAKMAELGLP
361 NFGPTFSVSC GNHGGDALVG VTQWDATSKT WSLISDFKPT DGDVIGALIE EDSSAYASEN
421 NISPRCN
SEQDB ID: 3101377FPC
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFYREAGDFK TSYQADSQTF PIKFDRYRYY VVLAVAFGII PFIINDYWAN ALLIPFLIYA
61 IAAIGLNILV GYCGQVSLGT GGFMAVGAYA CYKLMTAFPE VSMFIHVILA GGITAAVGVL
121 FGLPSLRIKG FYLAVATLAA QFFLVWLFNR VPWFYNYSAS GQINAPERDT FGIIITGPNA
181 PAWATYLFCL VFLTACALIA RNLTRGTMGR TWMAIRDMDI AAEIIGVNPL KAKMTAFAVS
241 SFFIGISGAL FFALYLGAVE VGEAFGIQKS FLVLFMVIIG GLGSIFGSFA GAAFLVLLPV
301 VLKVVGADML GWPTDIVAHL QLVIVGGLIV VFLIMEPHGL AQLWRVAKEK LRLWPFPH
SEQDB ID: 3101377FPD
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNKLIAIVNV VAWSGFWAFG YIALTAQDLS ERQLIIASLL AFAGFIMGIV AYLRLVRAAE
61 ASGYAKKTNQ LDAAARNRAQ SEGGM
SEQDB ID: 3101377FPE
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDQLIFGIE VILNGLMAGV LYALVALGFV LIYKASGIFN YAQGVMALFA AMTLVGIMNG
61 QVPFSHLINA VFGGHITHFG WNVPGFVAIL LTMAVMVLLA WAVQQFVMRH LVGQEPIILF
121 MATIGLAYFL EGVADLMWGS EIKTLDVGLP QGLNVWIDDT TYGIFGYGFF IDNLDIVATV
181 IAALLVAALV AFSQYTKQGR AMRAVADDHQ AALSVGISLN FIWVLVWSVA GFVALVAGIM
241 WGTKSGVQFS LSLIALKALP VLMLGGFTSI PGAIVGGLII GVGEKLFEFA IGPMVGGATE
301 NWFAYVLALI FLVFRPQGLF GEKIIERV
SEQDB ID: 3101377FPF
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGASPRPPSR QPGHCRKTRE TPMLDASEGY TTADGRKIGG VVMEMKNITL RFGGVVAIKD
61 ISFDIREGEI RAIIGPNGAG KSSMLNVISG FYVPQEGEVW FHGKKRPGMR PYEVARQGIA
121 RTFQNIALFE GMSVLDNVMT GRLNYMKTGL LSQAIWKGKA EREEVENREA VEKIIDFLEI
181 QHIRKTPVSR LPYGLKKRVE LARALAAEPK LLLLDEPMAG MNVEEKEDMS RFILDVNDEF
241 GTTIALIEHD MGVVMDLSDR VVVMDYGKKI GDGTPEEVRN NQEVIDAYLG VAHD
SEQDB ID: 3101377FPG
Reference:
3101377
Name: AMP-binding enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQTQSGAEG LQSLPALLHR NATQYGNHPA YREKEFGIWQ CWTWAEVAAE IRAMALGFLE
61 LGVAKGDHVA VIGRNRPAHY WSMVAAQMVG AVPVPFYQDA VAEEMAYVME HCGAKFIVCG
121 DQEQVDKVIE IQETVNQVQQ ILYTDKRGMR KYDHSQMNAL EDVMAEGRAG HYRFDAELDR
181 RIAEITYDDT CVMLYTSGTT GKPKGVVLSN RNVIESAKNS AKFDNLTKDE NILSYLPMAW
241 VGDFIFSIGQ AYWCGFCVNC PESPDTMMTD LREIGPTYFF APPRVFETQL TNVMIRMEDA
301 STLKRNMFHH FMAHAKKVGG KILDGEQVSA GDRLKYAIGN ALVYGPLKDT LGFGNVRVGY
361 TAGEAIGPEI FDFYRSLGIN LKQLYGQTEA TVFITVQPDG QVRADTVGVP APDVEIKIAE
421 NGEIFYRSPG TFVEYYKNPE STASTKDAEG WVATGDAGFF EEDTGHLRII DRAKDVGKMA
481 DGSMFAPKYV ENKLKFYPDI LEAVLFGNGK DRCVAFINID LTAVGNWAER NNIAYASYQE
541 LAGHPKVLDT IRSHVEKVNV SVAEDPMLSG CQVHRFVVLH KELDADDGEM TRTRKVRRRI
601 VEEKFADIIA ALYDGSEKVS TVTEVTYEDG RKGAIKATLT ICDAKVMPTA PQQVAAE
SEQDB ID: 3101377FPH
Reference:
3101377
Name: sensory box His kinase/response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRNDQWIKA MTSAGLNLIA QGLSIYDNNL RLAVSNRRFR EMFHLPDRLI RPGARFDDTI
61 RYIAERGDYG PVEDIDALVR SRVEQALAFV PHYFERIRAN GQVISIEGAP LPQGGWVTVY
121 TDITRTKRIE ELLRARSEEL SGQLLAHAEE LGATNRKLAA TISALEEAQR QLTEIEARTR
181 LTTEMMPAHI AHVDRDGHYT YSNRRLSAVM PGRPSDILGL HISDALGPDA FSKIGPHLEA
241 AYGGDSPVFE FNEAHDSRRI RVAFTPDGAG GVYILSMDVT SETQARVALQ QSRRRAMAAQ
301 MTSGLAHDFS NLLTIILGMM SKMEKMGLPE EAAELISATQ ATAQRGGRLL NRIADMTGNR
361 TLRPRATDMH GLLEDLKLLA TPSLPRGIGL SVLDHTPDEA LMLDAGMLQD ALLNLVLNAR
421 DACGANGQIT ISAHAISRIW IEIAVTDTGP GFSKEALGKA LNPFFTTKGS EGSGLGLPMV
481 YDMVKLAGGD MRVANTATGA AVTLRLPYRA APQAQGGLAL LVEDNEDLRA TFRDMLVDLG
541 HTVIEATSAD EASALAADIE DIALVLSDIR LEGDATGIDL LKRLPKSLPC ILMTSLPLSD
601 PLHREALARG PVLRKPFTRA QLAALLRPEE GS
SEQDB ID: 3101377FPJ
Reference:
3101377
Name: DNA-binding response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAPLVTILD DEPEIRLILT EALAEAGFRT QSFSRAREFE ASLKRVTPDV CLVDLSLPDT
61 DGLALVHRLA LEQGAAVIII SGRAQVQDRV TGLELGADDY ITKPFDPAEV VARIRARLRD
121 GQRGPVSSGG DTAEFNGWTA HFDRYALEDD TGAETPFSHA EGEVLRLFLE SPKRLISRAQ
181 MQEALGSGAG DSFDRAMDVR ISRLRTKLRE DPKNPRLIKT IYGAGYIFLG DVSWR
SEQDB ID: 3101377FPK
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTAEDKDK ITRRILESAA KAFRADGYDA VNLDRIMAGA GLTRGAFYAH FKSKDDLFCA
61 VLRFQHPLLR MLKARPGGNG PALADEMRAV LAGYLEPMHL ETVFKGCSLA ALTGDATRAG
121 PEARAAYQAG WQDILIEMAR GQSVPPSAFA PVLTLASGAV RSARAMCDAE ARAELLREVA
181 QAVDQLLDRA LSAS
SEQDB ID: 3101377FPL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTELHVTPIY AALLAILMAV LSTWTGVQRG RSNVALGDGD DAALALAIRR FGNLSEYAAM
61 TALILLLMEM QGIADTWLHL YGGLLVAFRL LHPLVLYAQP EAPLWRKAGR FVSAAGTAAL
121 LLAGGVAILI
SEQDB ID: 3101377FPM
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWDDLKTVL AVVRGGTLAA AAAELDINYT TVSRRILRAE AALGEVLFER LADGYRATDA
61 GRMVAEHAAG MEARQDDLLR RLQSRDQSLS GELVITAPQL LVGPHVAPVM ARFAAAHPQV
121 QIHLRATNDL LDLTRREADL AIRISRSPGD TLTGLRLCAQ HAASFATPEL AERLAEDPEA
181 AVDWIAYEQN PRVPPTILER YPNTRLRMVF DDMAAMVGAA QAGLGAVRMP MFLGRASPGL
241 VQVPLLAPQP YADIWVVAHR DVWRAAKPRA FREVLVPWFK TNRPLFVA
SEQDB ID: 3101377FPN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHATHALPRV FDTHSRDYSW VIATRKEIDM IYAVFKARVT DPAALATYRE QAGAALARHG
61 GKVEAATPAA SALDGTPDIP DVAAVLSFPD AAAARAWIDD PTLADLHALR RSAGKTEILL
121 LG
SEQDB ID: 3101377FPP
Reference:
3101377
Name: GDSL-like lipase/acylhydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRTLLFLVT FTGVLAACQD SVSRNQDARI LAIGDSLLSW NSALGSSIPD VIEKELGQPV
61 VDRSFGGAWM LTRDEGDEGR GLNVPYQYEP GNWDWVVVNG GGNDLLFGCG CGRCGTVMNR
121 LISEDGESGQ IPDLIRRIRG EGARVIYPGY LRSPNLLTPI EHCKNDGDEL EARIARFAET
181 DAGVFYISMQ DIVPPGGLTY FAPDLIHPSR KTSRKVGERL ASAIRQLDAR P
SEQDB ID: 3101377FPQ
Reference:
3101377
Name: amidase, Isotype: hydantoinase/carbamoylase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVNAERFLE DLNTLRSFGA AGVGKGVVRP AYSEADIAAR RWLAGRMEEA GLQVRFDPVG
61 NLFGLAAGPS LLMGSHSDSQ PEGGWLDGAL GVIAALEIAR SSDRPVSVVS FQDEEGRFGV
121 TTGSAIWSGH LPLTEADGLS DHAGVSFATA RAAMADLAGD FVDPAQFTGF VEMHIEQGPT
181 LDIEGEQIGV VSDIVGIRDM KVTFEGQQNH AGTTPMHLRR DAFQALGEFN ARLNDRFRNV
241 VTPRTVWTIG HVNLHPNASS IVPGRARFSM QWRDGDTARL ARMEEIIRAT ALEVAEARGM
301 KLSFGPLLGL EPVEMDRALR AALEQGAEAV APGRWRSMPS GALHDATNVS RLMPVAMLFV
361 PSIGGISHDF AEDTREQELL AGLRVLDHAV RVLV
SEQDB ID: 3101377FPR
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHITLIRHG QANTHARDEA SYDRLSDLGH QQARWLGSHL ADTRAHHPRV YCGTLTRHLE
61 TAASMGLADV VQDPRLNEIE YFTLAELFET QHGVVVPEDR EGFVEHLPMT FTAWAEGRIQ
121 DAPESFEQFE TRVQTALAEI AQGAGPAIVV TSGGLISMVM RQAMGLDIPA MARVALAIMN
181 TSMHRLYPIG THLSPVLFNA VPHLEAPERQ FAQTHL
SEQDB ID: 3101377FPT
Reference:
3101377
Name: glutathione S-transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQLYCAPGTI SVAVAIALHE AGIEHEKVQL DFRAAEQTKP AYQQINPKGR VPALALPGGI
61 LTETGALLEF IADSAPDKGL VPADPLLRAR MREVMYYLAT TMHVNHAHKL RGARWADRAD
121 SWADMTAKVP ETMATSAAYV ERNGLRGPFV LGEVLSIADC YLYVVTGWLE GDGVDLEPFP
181 KIRAFRAAME ARESVRAVKA AGLL
SEQDB ID: 3101377FPU
Reference:
3101377
Name: saccharopine dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHLWVRAEQ RPNEERVGLT PEGAAALIAA GLRVTVEESS VRAIPLDGYR DAGCQIAPEN
61 SWPDAPGDAI IFGLKELPED GTPLPHRHIM FGHAFKGQHS GRRLLERFKA GGGTLYDLEY
121 LVDENGRRVA AFGYWAGYAG AAVTLKAWAA QQQGGICGPV GVYPGKDTLN AALAAELDAT
181 GAPRPRAIVI GALGRVGTGA ADLCTAMGVE VTKWDMAETA SGGPFPEILA HDIFLNCIFA
241 RPGTPVFVPR EALSAPRALT AIGDVACDPD SDYNPVPVYD RATSWDAPVL RVAEAPVLDV
301 MAIDNLPSML PVESSEDYAA QLLPSLLTLT DLDAGVWGRA RATFLGHVEG
SEQDB ID: 3101377FPV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMEIYLGFLA GTLGTICWIP QAWKAWSSRD TAGLSLPSNL LFLLTVTLWL IYGLLVGDLP
61 LIIANACAAV IVLSIITAKL KFG
SEQDB ID: 3101377FPW
Reference:
3101377
Name: saccharopine dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIHWCGTGL SAIPGLRRLI EAGHALTVWN RTVEKARAEL GDLTDDIRAF DIDALGAVLA
61 KGDVVVSMLP GDWHVPLAEL AIAKGTHFVS SSYIAPEMRA LDERAREAGV SLVNEIGLDP
121 GIDHLMAHEL VADYRASDAF DAQNHLSFIS YCGGIPKHPN PFRYKFSWSP LGVLKALRSP
181 SRSIRDYAPL DVARPWDAIS SYTAPLPTPE SFEVYPNRDS LPFMGQYHFK EHWPVKEFVR
241 GTLRLNGWAD AWGDVFREIE TLSGPEGDAR LKEMSDQFWA ENAYDQGEPD RVVLCVGLKA
301 EKDGREVWHK SYVMDAWGDA RGTAMARLVS IPVSLAVEAV LNREIPAGVH AASSDPKLLA
361 RWMAEVATLA QHLQIVDHTA
SEQDB ID: 3101377FPX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLEISARKVA QVAMMARELD RAEGELRAFI DRMGEDEQAE LVAIMWIGRG SFETEELAEA
61 IETAKAEATT PCADYLLGSP HLSDHLENGL DALGISAEDV ENDLM
SEQDB ID: 3101377FPY
Reference:
3101377
Name: ADA regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLFLPDDD TLYAALLARD PAWDGRAYVG VSSTGIFCRL TCPARKPKRE NCHFLPTVAA
61 CLAAGYRACL RCRPLRPEGD GDPVVTRLLA ALEADPARRW TEGGLTAMGL DPSTVRRSFK
121 RQFGQTFLDM ARQARLQAGL TTLAQGGRVI DAQIEAGYDS PAAFRAAFAR HLGLPPGSFR
181 ANARLRADWF DTVLGPMIAV SDRTHLHLLE FADRKALPTE LKRLHASCKG DMGFGRLPPI
241 DEAEAQLTAF LAGRRARFDL DLALHGTPFT CRVWQALQEL PAGSTVSYSE LARRLGRPEA
301 VRAVARANGA NQIAIVIPCH RVLGADGALT GYGGGLWRKQ RLIELERAYA QTERTPA
SEQDB ID: 3101377FQ
Reference:
3101377
Name: ribosomal protein S20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsT
Sequence:
1 MANSPQAAKR ARQNEKRFAI NKARRSRIRT FLRKVEEAIA SGDKDAATAA LRAAQPELMR
61 GVSKGVFHKN TASRKMSRLS SRVKALG
SEQDB ID: 3101377FQA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNQIALAQSF AALHRPGQPL ILYNAWDAGS AQAIAKAGAR AIATGSWSLA AAQGYADGQQ
61 MPLEFALQIL ARMASRVELP VSFDFEAGFA SRPGDLATNT ERVIATGAVG VNFEDRVIGE
121 QGLLPLSEQV ARLTTLRRAG EATGVPLFIN ARSDVFFQGS APEDHPALMG EALTRARAYA
181 EAGADGLFLP GLVTPDLIGE VCAATALPVN IMQTGKAPGH AQLAALGVAR ISHGPAPWIM
241 AMAELTRAAE AALKF
SEQDB ID: 3101377FQB
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQPDETTLKL REVRAAAGLS LAKVAELTGV SKAMLGQIER GESSPTIATL WKIAKGFQMP
61 LSALLGPAAL RDPHDARLFR TVTFPGSIEV KIVFPFDPLL GAETFHVALK PDQSHQSAAH
121 AAGVTEEVFV LQGTLEVLRE GDWVPVASGQ GLRFAADLPH GYRAGPTGAA FLNMHHYPRE
181 ATAPAPIPG
SEQDB ID: 3101377FQC
Reference:
3101377
Name: dihydroxy-acid dehydratase, Class: EC4.2.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvD
Sequence:
1 MPMYRSRTST HGRNMAGARG LWRATGMTDG DFGKPIIAIV NSFTQFVPGH VHLKDLGQMV
61 AREVEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREVI ADSVEYMVNA HCADAMVCIS
121 NCDKITPGML MAAMRLNIPA IFVSGGPMEA GKIDIADLEM TKIDLVDAMV AAANDKFTDE
181 QVQHIEENAC PTCGSCSGMF TANSMNCLAE ALGLALPGNG STLATHSDRK ALFLEAGRRI
241 VEITKRHYEG EEKGLLPREI ATFEAFENAM SLDIAMGGST NTVLHLLAIA HEGEVDFTMT
301 DMDRLSRKVP CLCKVAPNTA NVHMEDVHRA GGIFSILGEL SRAGLLHDDC GTVHSASMGE
361 AIAKWDIKVA NNPEAESLFK AAPGGVRTTQ AFSQSNRYKD LDTDREGGVI RSKEHAFSQD
421 GGLAVLFGNI AEDGCIVKTA GVDASILQFT GTAHVCESQD DAVNNILTGK VKEGDVVVIR
481 YEGPRGGPGM QEMLYPTSYL KSKGLGKACA LLTDGRFSGG TSGLSIGHVS PEAAEGGTIG
541 LVEDGDRIEI DIPNRRIHLA VSDEVLAARR AAQEAKGWHP AKPRKRKVST ALKAYAKLTT
601 SAAKGAVRQV
SEQDB ID: 3101377FQD
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPSLRQLEY IVAVDRLGRF GLAASALNVS QPSLSAQIAE VEAELGLRLF HRSRTGVIPT
61 VQGAELIRRA RRILREMEDL RAAASGGVPF GGRLRLGVLP SIGPYLLPGV VSALHRNHPE
121 LRILVREEST QWLEQGLKAG RFDLIISTPE DHPGTVQTRL FSERLWIAVA RDDVLAQGSG
181 PVRADDLRGR MFLTLDRGHR LSRIVYALAS ECGGVVSEEY EGTSLDGIRL MAASGAGVAI
241 LPEVYVRRQG EAGHETVLRP LVAAQASRDI ALLQLGGGEE MAGTDLIAGA LRQGAEALGI
301 AADSAGEET
SEQDB ID: 3101377FQE
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLILDSLTV NLMTPTILFF ALGLIAAFAR SDLSIPEGAA KLMSIYLLMA IGFKGGASLA
61 EHGIHADLFA AIGAGVALSF ALPFAAYLLL RAMTRLDPMN AAAVAGHYGS ISIVTFVTAT
121 SLLELGGYSY EGYMIAVAAA MEVPAILSAL WLAHRGGART EGSDHLWRDL LANGSIVLLL
181 GAFVIGAATG GDGMKTIAPF IVTPFTGVLC LFLLDMGLSA GRSLLRNRAL LTPGLFAFGL
241 LMPILSSLLA LGLGQMIPLS PGGLFLLMVL AASASYIAVP AAMRIALPRA ESGVYLTLSL
301 GVTFPFNVTL GLPLYLWLAG VN
SEQDB ID: 3101377FQF
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRAARLSAE RWVEIGLETL AQEGYVALKA DQLSRAQGVT RGSFYYHFEN VADFHAAVIA
61 RWKHVATNQV IAGLLDQADP RKALESLFRT AFGHPESLEW PMRFWAENEA LARAAIDEID
121 TRRIGFLEQL LGAIGHAPPI ARRKAQLIYD CYLGSSLRRR LNPAELDGLV AELLQLAGTP
181 ATGDW
SEQDB ID: 3101377FQG
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGFPGTWMTE SESVVYRVVP KCACSTIGQI MYYSDHGEFF EGDIHDAQGG MHKWALEASQ
61 GPITRNVKAH KSYSFTCVRN PYTRILSSFF DKICGIQRNG KRYRGNLVPT LIYKYGIEVG
121 GEDGKQEFDQ IASFRRFLLF ARDTIRWRRP MDPDIHWSAM SGHISTFICN GGRYDKIFWT
181 ESFNDGMQEV LDNIETPHKV RLDKIPRFNE SEGHGPKRLH PVEDYFDDLS KHLVYEIYKR
241 DFDLFKYDFE NPGNKMPIDE IDLDEVHAKL GE
SEQDB ID: 3101377FQH
Reference:
3101377
Name: epsK domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKIAYILLC HKDPDAIIMQ AERLTAAGDY MSIHFDARAR KADFARIRKA LADNPNVTFA
61 RRRIKCGWGE WSLVQATLNA IEAAVDEFPR ATHFYMLSGD CMAIKTAEYA HSFLDAQDKD
121 YIESFDYFES DWIKTGWKEE RLIYRHWFNE RTQKRRFYAM FQAQKRLGLT REIPSDIQVM
181 IGSQWWCLRR RTIEWILDFT RKRRDVMQFF ATTWIPDETF FQTLVRHLIP EDEIDPRTLT
241 FLMFSDYGMP VSFYNDHYDL LLSQDFLFAR KISPEAKELK ARLGRLYAAH GVQFQISNEG
301 RNLYKFLTGR GRIGRRFSMR FWETESTLGR ERELMILVCK KWHVAKRLLD QIRQVTNVPS
361 IEYLFNEEGT PLPDLGGIQA TLEKRTRHRR ALMRMLFEYF DTDRLVICLD PTNLELMHDF
421 FSDRSVTRML EIECQFTDEY LIGHSYRVGL AGERTPKATL ERLLPTIRNE MTYEADRIRD
481 AGFARYGRIH QTSTPEENAD KVAEFLSIPW DQALRITQTD HLFAD
SEQDB ID: 3101377FQJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRYVKWVIIG LFWLCVAAFL HYTLPQRDIV RIVNTYEERQ ELNDWTRIFW SRPDDQSATI
61 INRDVQFIQG VTPEGRPKVY RNEDTSWSWP PYFKFDTANL YTEANDAIST KDTPEWVAIT
121 HYGWRNEFLS IFPNAVAIKP VAGPDVRLIP WFNIIVLTLL AALVWAIWVR WRRFRQRRID
181 PVIEDVEDSL YAAGEAIEER RGRLRRWLDS WKSK
SEQDB ID: 3101377FQK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFGLLRLVVV LLVLQTVTYI GLSLYSRAVR RGKLARWWEE KGKTGDKEAF VARGLKAYDK
61 SFRRKLILGV YFVPWVLIAV LIYIVNFK
SEQDB ID: 3101377FQL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRLIQSGLM FGNLVHISSP ALVERYNRAL QHLAGKTTAL TDFHIDISGF SPEIGDELGD
61 PLYLNPNGVN RQFILLTPEQ KRAPLLNVKF STSRPILRDF IEANEAQLFA LTATDAVAGE
121 LVNSVFRLRS PADLFTLRKI EIEADTVGGT LKNADKLAAM IERFKTENDA WFDDVLIAEM
181 IGISKQTGDI SRNPVHLSHK AHEQRNFWTA HFGGLYLFPD MQHPAMICAG EKPRDEMPVK
241 YVFDLSERNR IAKFLDYNKL AEPIVRARGM DAAAVLRQKM DFIVIDTAAG AGLNPAGLDR
301 GDMRRLARMH ADRLPDEYHG LAELARWAEN GGDWPRISAD HPAYFYGLRA ADTPERDLVN
361 MLLAELAPLD ARQLFICHKE LFYRHYASWS EAKKSFVADF LAREYQVDKA GARAALFGHE
421 PEMESEDSPP GLDERLIERV GPWGAIRRR
SEQDB ID: 3101377FQM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLTSDQMEL REEAIRAHYP AATTLLDGFD HAPRVAQART PARAEERSPG IPTARRFRST
61 TPGLVTRRTT RPDGVHLRER IEAADDGDTL VSPLQATVAQ AIRRALAIAL AMGEGYGDRT
121 PLGDLKRANL AGDLPVARKG EFTELLTAEG LVVTHVFGNA LAYLLSPHLG ATSVEVGEVE
181 EFLTDNAQVA LHGALWDLDQ KLAQFAGDDA QLIATTAGFA EQLMAKAAAR AQGAGHLAPF
241 TGAAWHVEAD DLTLRGFTPS AKARSTKLTM TFKKPNEVVG NHIAKYQAMK LAKMLMAYDF
301 ERRLNPFAEL GGFIFTFMGD GKPGTGKTTL IQMMAGLIDE YCRNAGYPFR YQNFGIDNID
361 SYQGKSGQNA KAFVQNVLDP GVIGFGTIDD IDQIAGKRGD RQSSAGQQEV TAVFMEAFAG
421 ANTVVRGNCT FGMFSNYPEN VDDALRQRAG ARFLVDGPQT RDDYIDILAL LLGKRHDIPL
481 GAHDLYAAQE IKRAVAASFA AHGRPQEAGL AQVWERVGAQ VGPLDTIAKL GTYLKGIQEA
541 DERFTGRAIK NITDAVKVRA MDFELPDEWM ETPDLFLFRD YDTKLAMIEE LRQPITVDMV
601 VQEINRYADS EFRYADKSDE VAIDGMVRDL TRQEEAKRRY LEEKG
SEQDB ID: 3101377FQN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSANPTQDHV GLTDTFASRR YFRKFEGITT HLLRVAANME AEGVISRDEV RIVSRYISGL
61 LFTFRALSMK YLLVGRDTGR FFGSLNMDKR DSGFPVAAEL MTMANDAQQA ASHLANMPSE
121 AALKDEMVQT ILGSREIPTK LQFALSQRLY YEELARGQLF WVRNDPECHW IATEGARRRF
181 LLHWAVYDSQ INLPVIYLMR LEDTGKQALP KDSRRWPEVQ AHLMAQSLAG LKLLTIAKGF
241 DEDFDDLHPK HLRRIHVGPM YSSAFTEQSG PLRAVLEDAQ APAGQDWALA WTSEELESEE
301 VREERAGWFG TVEREVFALD PFGGQGAETG ATRTSRSIIL PQRPFQVLAE RNPAGFADVR
361 KFVVSDSGQV LRY
SEQDB ID: 3101377FQP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDTAFEAMI LETQRKVRES QAQIEGVTSR IEAARAKIGT AEADIDIENA TLEDVHAHTE
61 VMNANIAELI MGLDDVTSAF SKDFDEMRSK TGWESFVGIF SSGKSESMRQ ERMRTANIDD
121 KLQDLIAKSD VIVKLLQGQL TVLEEQREKV ETNLTGTLDD REFTVQELET VRAEILAMDP
181 QIIALENKIS VEQDAAARTK LETELADLNK TYNAKVRDEQ VKLAKSQTLE RYIEKGKTWV
241 DSLQNQAATQ MVLINKLQTD TQQRVVLYDA LTKSLKTAQQ QDVAHRINEI GVQTDQEAQT
301 AMAAIGTATN QKMADMLEAH EDHMVFARDV LEKKAKADER FARRFAAIVE KHDKNLYGG
SEQDB ID: 3101377FQQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSFYAPVTP QGAGESERPA PEKVLSGDPV FTTWNLEERE GLYCGIWRST PGKWRVSYDE
61 WEYCRILSGH SVLTDAEGTE ITLRAGDSFI LRPGFSGTWE VIETTTKDYV IRL
SEQDB ID: 3101377FQR
Reference:
3101377
Name: creatinase, Class: EC3.5.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTADLSRPEF YRYHNGTEAR LPFEAAEYEA RLAGLRARME ALGAEAAVFT SMHNIAYYSG
61 FLYCAFGRPY ALVVTPRESV TISAGIDAGQ PWRRCHGDNI TYTDWQRDNY WRAIRSVTGE
121 GRVIGYESDH LCLLQKGKLD AFLAPSKTVD LFDTTMRQRM MKSAAEIALI RQGAQVADVG
181 GYAIREAVKA GVREIDVAMA GRDAMELEIA KRFPDAEYRD TWVWFQSGIN TDGAHNPVTG
241 RVLERGDILS LNTFPMISGY YTALERTMFV QEVDAASLKI WEANVAAHEY GMSLLKPGAS
301 CAEVTHKIND FFAERDLLQY RTFGYGHSFG VLSHYYGREA GLELREDIDT VLEPGMVISM
361 EPMLTIANDQ PGAGGYREHD ILVITEDGNE NITGYPYGPE FNVVG
SEQDB ID: 3101377FQT
Reference:
3101377
Name: succinic semialdehyde dehydrogenase, Class: EC1.2.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gabD-2
Sequence:
1 MGGPTNSRRR HAMLDAATDL KSLLKTPDLL ATKAYIGGQW VDGDNGTFAV TNPARGDVIA
61 EVADLSRAQV AGAIAQAEAA QKEWAKYTGK ERAVILRRWY DLMMEHAQDL GRILTAEQGK
121 PLAEAVGEVA YGASFIEFFA EEAKRIYGET IPGHQRDKRI TVLKQPIGVA ASITPWNFPN
181 AMITRKAGPA LAAGCAFVAR PAAETPLSAL VLAVLAEKAG IPAGVFNVVP SSRSSEIGKE
241 FCENPGVRKL TFTGSTEVGR ILLKQAADQV MKCSMELGGN APFIVFDDAD LDAAVEGAML
301 CKFRNNGQTC VCANRIYVQA GVYDAFAEKL AAAVAKLNVG DGLSDGVTTG PLINAEAVEK
361 VLEHLGDVTA KGGAVLTGGK PHALGGTFFE PTVVTGVTQE MKVAKEETFG PLAPLFKFDD
421 VDEVIAMAND TIFGLAAYFY AKDLSRVYKV AEALEYGIVG VNTGIISTEV APFGGIKQSG
481 LGREGSHHGI EDYLEMKYIC MSV
SEQDB ID: 3101377FQU
Reference:
3101377
Name: globin domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDEQIRLVQ SSFARVFARK AELAERFYVH LFERLPDAKS LFRGDFFAQK EMFATMLAST
61 VRGMNDVQAF HTMGQALARS HARFNLRRDD LDKAAEALSA AFRDVFGDTL NAQEQEAWDV
121 AMRRLTRMLA TPE
SEQDB ID: 3101377FQV
Reference:
3101377
Name: RNase, Isotype: R, Class: EC3.1.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rnr
Sequence:
1 MTRIPTKQEI LDWISAHPTL TSKRDIAKAF GIKGSDRIDL KRILKELEAE GHLEKRKRSY
61 ADPDRLPPVS VLQVKEPDEN GDLFARPLEW HGEGVEPIVL VLPRASDPAL GAGDRILARL
121 TVVHEEDHNY EARLIRRIGT NPHKILGIFR KSAEGGRILP IDKAGQNEWL VAEGAVHGAK
181 DGELVEAEQA GPKGRLGLPR ARIIERLGDP SAPKAVSLIA IHQHGIPDDF PDKVIEEADS
241 AKPQGLSGRQ DLRDMALVTI DPSDARDHDD ACFAHADDDP KNPGGHVIWV AIADVAAYVR
301 AGSALDREAR KRGNSTYFPD RVVPMLPDRL SGDLCSLHEG VPRACIAVRM QIDAQGNKIG
361 HRFVRGMMRS VASLNYQEVQ DAIDGSPNDK TGPLLDEVLT PLYAAYKALD AERDRRQPLD
421 LDLPERRIVL NDKGHVESVA FRDRLDAHKL IEEFMILANV AAAETLIAKR VPLLFRVHEE
481 PAPEKLEALR ETAQASGLTL AKGQVLQTRH LNALLHQAAG TDEAELINIS TLRSMAQAYY
541 NPENFGHFGL ALKNYAHFTS PIRRYSDLIV HRGLIKAHGW GDDGLTADEI EQLDRIATHI
601 SDTERRSMMA ERDTTDRYLA AYLSERVGNE FSGRISGIAR FGAFVKLDET GADGLVPVRS
661 LGREFFHFDR EAGTLMGSET GLLIAIGQRV TVRLAQASPV TGGLEFEMLS IEDKDMPRGG
721 TPSKGKRVVR RKAAKAKHKT DKLKRKMEGR RK
SEQDB ID: 3101377FQW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRTLVIMVK EPRPGRVKTR LGRDIGMVGA AWWFRHQTRA LIRRLRDPRW RIVLAVSPDV
61 EGLASRVWPA DLARSPQARG DLGQRMARQL RGAPKGPVCL IGADIPGVTR AHIARAFAAL
121 GRAEFVFGPA PDGGYWLVGA ARRGALPPGL FGHVRWSSEH ALEDTLAGLA GRRVALVDGL
181 RDVDRLADLR DASPPGRASS LLR
SEQDB ID: 3101377FQX
Reference:
3101377
Name: succinyl-diaminopimelate desuccinylase, Class: EC3.5.1.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dapE
Sequence:
1 MTLDAARLTA DLIRCASVTP ADDGALDVLE RVLSQAGFSC TRVDRGGICN LFARWGDKGH
61 ARSFGFNGHT DVVPVGDAAA WTVAPFGAEE KDGFLYGRGA TDMKSGVAAF VAAAVDLVTT
121 TPPEGAVIVT ITGDEEGDAL DGTKALLDYM AASGERMSVC LVGEPTCPDR MGEMIKIGRR
181 GSMTAWFTVT GVQGHSAYPH RAKNPLPAMA RLMDRLASHG LDQGTDHFDP STLAVVTIDT
241 GNTATNVIPA QCRGAVNIRF NDLHSGASLT GWMQGEADRV AEEFGVAVEM KVKISGESFL
301 TPPGELSDLV AAAVEAETGV TPVLSTSGGT SDARFVKDHC PVVEFGLVGR TMHQVDERVE
361 IAQIHQLKAI YGRILRDFFA
SEQDB ID: 3101377FQY
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRDMATGAE LNYNQNASAM QMAQTIFGDG VTVVGASYSG WSGSSAIYSN GDALAPGATP
61 GDTGVILSTG RASHFTRGGG DPNRSTNTST NTSGENNNAD FNAAAGTNTY DASYLDVSFI
121 PDSSVMTMQF VFSSEEYPEF QSSIYQDFVG VWVNGQQAQL EVGNGDSDPG NINAVNNQNL
181 FLDNSGDAFN TEMDGLTVTM TLTMNVIPGQ VNTIRIGVAD VSDSNYDSNL LIAANSLQTR
241 LVAVADHSTI YPNGSVTMDI LANDINQSGA TLTITHLNGI PVTAGSTITL ATGQSVTLNA
301 DGTITVTGDG DVEHFNFTYT VTNGSNTDTG IVNVNAIPCF VAGTLIDTPY GERQVERLTP
361 GDQVFTRDNG PQEVRWVGER TVDAEGEFAP ILIRAGTYGA QRDLMVSPQH RILIRDGLSE
421 LLFGEPEVLV AAKDLVDGRR VQIVPGGRIT YVHVMFDSHQ VIYSEGLASE SFLPGPQTTH
481 LFEPETLAEI RAVFPDLDTA TGQGYGPAVR RILRKYETEL LLTSAKVA
SEQDB ID: 3101377FR
Reference:
3101377
Name: chromosomal replication initiator protein, Isotype: DnaA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaA
Sequence:
1 MTQEKWGLLC QKLLKTVGQN NFTTWIEPLE FQALENGVAV FTVPTNFMGN YVSQNFSDLI
61 LYELNNAGEA VQRLAFRVAA NSPMRPARAA RPAAAAAAAA AAVEAPQVSA PRATDTSDVL
121 DGLQAAPLDP RFTFDSFVVG KPNELAHAAA RRVSEGGPVT FNPLVLYGGV GLGKTHLMHA
181 IAWELKVKRP ELNVLYLSAE QFMYRFVQAL RERRMMDFKH LFRSVDVLMV DDVQFIAGKD
241 STQEEFFHTF NALVDQNKQI IISADRAPGE IKDLEDRVKS RLQCGLVVDL HPTDYELRLG
301 ILQTKVQMYR TTYPDLVIAD GVLEFLAHRI STNVRVLEGA LTRLFAFASL VGREIDMELT
361 QDCLADVLRA SERKITVEEI QRKVSDYYNI RLSDIIGPKR LRSYARPRQV AMYLCKQLTS
421 RSLPEIGRRF GGRDHTTVMH GVKRIEELKL TDGQIAEDVE MLRRALEA
SEQDB ID: 3101377FRA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALPYGGSCV NTKPSCCSHL QRWPDMGWIA VSAPETQHFR TAGLDASAGA PALVGDHEDD
61 LMVRGTLVFE TRLPNAQRPR ILLQFERGGA WPFHLSLQAI PGGGLILIVN QGGSVLHQVL
121 NVADTGRIDT LRLSYAWDAP ARAGWLALEH DEREYAHLIE VEAPCPLRIG DLRMLFRDGP
181 HRFAAPELVY FALSSEIEPV GPMPSLHPET PIATPDGYRP LSKIRRGDTV IVASGEAVPV
241 LHRVSRTMPA FGSSRPLTIR RPYFGLRQDI QAAPSQRLLL SGTEVEYLFG RESVLVPARH
301 LTGGHSVLPA RARLTATYAQ LLLPTNEAMI TAGALAESLF IGRLHRKPLH LAASVLAGIE
361 RSRLPDHGRP RHHVLRAFDA RILAEARVA
SEQDB ID: 3101377FRB
Reference:
3101377
Name: Gln ABC transporter, Subunit: periplasmic Gln-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRKTGNRTL MRKFLISASL VLGLWPQFLL AQSLQVTTVT RPPFSFVEDG VETGFSMDLL
61 AALADKLGLG YTLERKEKFS DMLAAVMDGE ADMAIANISI TAARETEMDF SQPIFESGLQ
121 ILVPAETNAG SSLLRALLSR DLFLAIGAAF VILLTGGMLM WYFERRAQPY FDRKLHEAWF
181 PSFWWALNLV VNGGFEERVP RTAFGRLFGV LLVISSLFVV SVFTARITSV MTVEAISGSV
241 NSVNDLYGQE VGTIDGSTAA GFLTRRDIDF AAFSDLQEMI TAFERGALDA IVFDAPILSY
301 YASHQGKGKA VTTGAIFLRE NYGIAFPTGS ARVEEVNQAL LALREDGTYE ELYRKWFGRR
361 N
SEQDB ID: 3101377FRC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADKQKSRQQ VYTLVVQIGR KTGDGLPEGA TGAALMCYAS GVDEAEAVRE TVAILKQADT
61 APLDVTGYGT LEEREAQGHE IDAEERALMQ RALEENSVIV AQMTPFFDDE AAG
SEQDB ID: 3101377FRD
Reference:
3101377
Name: 2,3,4,5-tetrahydropyridine 2,6-dicarboxylate N-succinyltransferase, Class: EC2.3.1.117
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dapD
Sequence:
1 MSNQELEAAI EAAWDARDSI TPATTGATRE AIEETLAALD GGGLRVAEKQ ADGSWHVNQW
61 AKKAVLLGFR IKDMEIQSGG PQGGGWWDKV DSKFAGWGES QWKAAGFRAV PNCVVRKSAY
121 IAPGVVLMPS FVNLGAYVDS GTMVDTWATV GSCAQIGRNV HLSGGVGIGG VLEPMQAGPT
181 IIEDNCFIGA RSEVVEGVIV REGAVLGMGV YIGQSTKIVD RETGEVMYGE VPPYSVVVSG
241 SMPSTGGVSL YCAVIVKRVD ERTRSKTGIN ELLRD
SEQDB ID: 3101377FRE
Reference:
3101377
Name: biotin synthase, Class: EC2.8.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bioB
Sequence:
1 MAEAIRSDWS VDEVEALLRL PLLDLVGRAN GVHRAHHAPD DIQKASLLSI KTGGCPEDCA
61 YCPQSAHHRE VELTREKLMN PDHVVSLARR AQRAGAERFC MGAAWRQVRD GAEFDNVLAM
121 VRGVRALGME ACVTLGMLRP HQAQRLAEAG LTAYNHNLDT SPEFYGQIIG TRTYQDRLDT
181 LAYCRDAGIE LCCGGIIGMG ESLRDRAAML QVLANFAPHP ESVPINALIP IEGTPLAHRE
241 RVGIFDLVRM VATARIIMPL TRVRLSAGRS DFSAAEQALC FLAGANSVFY GDVLLTAPNA
301 GTGADAELFA ALGALETA
SEQDB ID: 3101377FRF
Reference:
3101377
Name: bioY family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQTTEAVVA GARAPALSGQ ILRVAAGIAI LTLSARVQVP FWPVPMTLQV AAVMALAALY
61 GMRLGTATLA GYLAVGALGL PVFAGTPEKG LGLAYMLGGT GGYLVGFLVA SALVGFAADR
121 LHRLALWPAM LLGLAVIYAL GLAWLAQFVP ADKLLAYGMT PFVAGDLVKV TLAALLVTKL
181 PQGWAERLRG GARHG
SEQDB ID: 3101377FRG
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTATIADTIY ARLSQQIITG ALSAGEKLRQ DHIARAFDTS HVPVREALLR LEAHGLAQSE
61 PRRGMRVTAL DPAEIREVIE MRVALEPLAL QHAVQNATPG DLQAIDVARL ACDGAEDMPT
121 WEARNRAFHR AILTPCAMPR LLSAIDDLHI ASSRHLHAHW RQRWRQRTDT DHAAILMAMK
181 RRDAETACDV LRRHLRRAL
SEQDB ID: 3101377FRH
Reference:
3101377
Name: pyridoxal phosphate-dependent enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWKADIAAA ADRIAGHVQV TPVMETRGFG LSDPLSLKLE QMQHTGSFKA RGAFNTLLSS
61 DVPAAGVVAA SGGNHGAAVA YAARALGHRA KIFVPEMAGP AKIALIRDTG ADLEVVPGEY
121 ANALALAQAH EAATGAMQIH AYDAPATVAG QGTCFAEWDA QGLEADTVVI AVGGGGLVAG
181 ALAWWQGARK VVAVEPETSC ALNAALTNGG PVDVEVSGIA ANALGARRIG EICFGLAQGG
241 ARSVLVPDAA IAAAQRALWA ERRVLVEPAG ATALAALMCG AYRPEPDERV AVLVCGGNIA
301 PDPFAG
SEQDB ID: 3101377FRJ
Reference:
3101377
Name: decarboxylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQRRKQGSP QMRDDRQSPF RDAHTDRSTA SHVPDTPQTR SPAYKLAFAD EDFLCRDELR
61 PVRLQLELLK PEMMMAERGI TSTVVMFGGA RIPEPAQKHT ARTQTLADLS EYYDEAREFA
121 RLITEKSKET GCKEMVIVTG GGPGVMEAGN RGAKDAGGCS IGLNIVLPHE QAPNLFVTPE
181 LSFNFHYFAI RKMHFLMRAR AITIFPGGFG TLDELFESLT LIQTGRMERV PFLLFGREFW
241 ERVINWRALA DAGTISAEDL DLFRFVDTAQ EAVEIIDNWE PAPPRDAIPG R
SEQDB ID: 3101377FRK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFRPDQQSV SKSATKPWRT EMAQADIGGT MIEAGVLDLL QRERAKALSA REWKFRLMGY
61 GYAIKDVQGA QVVTRLPQGV ELGVLPAEFA
SEQDB ID: 3101377FRL
Reference:
3101377
Name: Cys/Met metabolism PLP-dependent enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGNDGHETPR MGAFLHLRGA GLDKGEPVAL PLVQSSMYHL PGTPDGSNSY GRADNPTWVA
61 LEHALEHLEG ASCRVFPSGM GAISAALFAT LQAGQRLLIP ADGYYVTRLL ADRYLRPLGV
121 NVEERPTAGF AEGGFGGFDV VFLETPSNPG LDLIDLAAVA RAVRAAGGIT ICDNTTMTPL
181 GQRPLDLGID IVVASDTKAM GGHSDLLLGH VASRDAGLVQ AIEDWRRISG AIPGPHEAWL
241 LHRGLETLEV RFDRMCRNAE ALAPRLARHR AVSALRFPGL PGDPAHNLAR AQMQRFGFLL
301 SLDLGSEEKA EQFINGCPLL RPATSFGGVH SSAERRARWG DAVTPGFVRL SIGCEPLEEL
361 WQALREALDA L
SEQDB ID: 3101377FRM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRYSRANRS KRCAMSRRLL SIAALLAGNA IGLLLAALLL DGFSIAPLSL IVVVIVFSLI
61 QALAEPLIRR LSQRNLPALQ GGIALVVIFV GLLVTELVTS GLVVGGISNL LAATLLVWLG
121 ALAAGILLPR YVFKSLRAPK A
SEQDB ID: 3101377FRN
Reference:
3101377
Name: radical SAM enzyme, Isotype: cfr family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVKAPITQD VVTIPRKLPE GRINLVGLTR DRMREVLIDH GTPEKQAKMR VGQIWQWIYQ
61 WGVRDFEAMT NLAKAYRAQL AEHFTIEIPE VITRLVSEDG TRKYLVRIAG GHEVEVVYIP
121 EEDRGTLCIS SQVGCTLTCS FCHTGTQKLV RNLTAAEIVG QVMMARDDLG EWPVPGAPKD
181 ETRLLSNIVL MGMGEPLYNF DNVRDAMKIA MDPEGIQLSR RRITLSTSGV VPEIARTAEE
241 IGCLLAISFH ATTDEVRDVL VPINKRWNIE ELLSALAAYP KVSNSERITF EYVMLDGVND
301 SDADAHRLLD HIRRYKIPAK INLIPFNEWP GAPYKRSSNN RIRAFANIIY QAGYAAPIRK
361 TRGDDIMAAC GQLKSATERA RKSKKQIEAE TGL
SEQDB ID: 3101377FRP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVLRYAVAL ALAPVLTAAD PALECSDAAS QVETGACVSE MSARVEGALA IALEIARGSA
61 AELDEVTGRK MALPALDSAQ SAWTAYRAAH CEAVGAGFGG GSGTGIAITS CQIELGRARI
121 DELMAMAQ
SEQDB ID: 3101377FRQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSKLVRAIA GLCLAATAAT TSVSAQQSES TNRVASKTDW SVFVEDNPTE CWSVSAPKET
61 VNTRGGSVVS VRRSDILLMV FFRPKAGVKG QVTFTGGYPF APGSTVNLNV GGTEFELITE
121 GEWAWPATAA DDAKIVAVLK RGTDAVLTAR SARGTQTKDT FSLLGFTAAV EDAEKRCGG
SEQDB ID: 3101377FRR
Reference:
3101377
Name: L-asparaginase, Isotype: thermolabile family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRPVPMAEL WRGALLESVH MGHAVVCDSS GQVVRSWGDP GLVMYPRSSS KMIQALPLLS
61 SGAAAKYGLG TEQMALACAS HNGAAIHTHR VNDWLEQLGL DDHDLRCGPQ DPDDRPEHER
121 LIRAFESPCQ VHNNCSGKHA GFLTLGRHLE AGAEYHEIDH PVQQAALAAF EEVTGEASAG
181 YGIDGCSAPN FATSLTGLAR AMAWFASARD RSDRQSQAAA QLTEAMMKHP ELVAGEGRAC
241 TELMRAMNGR AAIKTGAEAV FVAILPEQRL GVALKIVDGA TRASECAIAA ILVGLGVLDP
301 ADPATRKRLD APILNRRGID CGRIRATAEM RF
SEQDB ID: 3101377FRT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMFIFAYHG GKTPETPEEG AEVMAAWQAW FGTMGDAVVN PGNPVGPSKT VSAAGVADDG
61 GANPLSGYTV VRATDFDAAI NMAKGCPMVE TGNGTVEVAE IIEM
SEQDB ID: 3101377FRU
Reference:
3101377
Name: Aha1 domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADLRLEREF AVAPEALFAW VSDGAKLLQW WGPEGLHVPA DQHDLDFTRL GPWFSVMVNG
61 EGQRYKVSGQ VTHVKPPQSV GFTWGWHDDD DRRGAESHVM FIVEPCAKGA RLILDHRELG
121 DDEMSLRHEE GWTSSLRKLA AELA
SEQDB ID: 3101377FRV
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNNAAMTQL LAAFSALSDP TRFAIVEQLM AEGELPAGDL VEGKGMSGAA VSRHLKLLRQ
61 AGLVHQRING TQRLYSVAPE GLRAIADWTI SKRIFWEGSL DRLAAAIESD KTWPT
SEQDB ID: 3101377FRW
Reference:
3101377
Name: Ser(phospho) phosphatase, Class: EC3.1.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: serB-2
Sequence:
1 MAVSTQRRCP MYVATLLTNP AIARLDPALV ESLRNAWGGG DAVWLSPDEA AEFSLATLPD
61 NRWQVWDDLQ ALGVDLVVQP AEGRKKRMLL ADMDSTMIQQ ECIDELADEA GVGDRVKDIT
121 ARAMNGELDF EGALLERVGL LRGLDEAVIG HVLDTRITLM PGGQALVATM RANGGYAALV
181 SGGFTAFTAQ VAAQLGFDEN RANTLLAADG KLTGDVARPI LGRQAKVDAL EQITARLGLS
241 EQDVIAVGDG ANDLGMLGRA GTGVALHAKP SVAAQCEVRI NHGDLTALLF VQGYARADFV
301 TG
SEQDB ID: 3101377FRX
Reference:
3101377
Name: Ser(phospho) aminotransferase, Class: EC2.6.1.52
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAIAQTASRD DARKPLTRPA NPRFSSGPCA KPPVFDVSKL ADAALGRSHR AAIGKDKLKA
61 AIEGTREILG IPADYRIGIV PASDTGAVEM ALWSLLGARK VEMLAWESFG AGWVTDVVKQ
121 LKLDAEVKTA DYGQIVDLAS VDFDNDVVFT WNGTTSGVRV PNGDWIATDR QGLTICDATS
181 AAFAMDLPWD KLDVTTFSWQ KVLGGEAAHG MIVLSPRAVE RLESYTPAWP LPKIFRMTKG
241 GKLIEGIFKG ETINTPSMLA VEDYLLALDW ARSVGGLNGL IARADANAQA IFDFCDTHDW
301 VANLAEDAAT RSNTSVCLKF TDARIQDGAG FAKAVAKRLE AEGVALDIGA YRDAPAGLRI
361 WCGGTVETSD VAALLPWLAW AYQAEIDAQS QAA
SEQDB ID: 3101377FRY
Reference:
3101377
Name: D-3-phosphoglycerate dehydrogenase, Class: EC1.1.1.95
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: serA
Sequence:
1 MAPKVLISDK LSDAAVQIFR DRGIDVDFQP DLGKDKDKLA EVIGQYDGLA IRSATKVTEK
61 ILENATNLKV IGRAGIGTDN VDKDAASKKG VIVMNTPFGN MITTAEHAIA MMFAVARQIP
121 EASASTHAGK WEKSKFMGVE LTNKTLGVIG AGNIGGIVCD RARGLKMKVI AYDPFLGEEK
181 ANKMGVEKVE LDDLLKRADF ITLHVPLTDQ TRNILGRENL AKTKKGVRII NCARGGLVDE
241 EALAEMLQSG HVAGAAFDVF SVEPAKENPL FGLPNVVCTP HLGAATTEAQ ENVALQVAEQ
301 MSNYLLTGAV ENALNMPSVT AEEAKVMGPW IALAGHLGSF VGQMTDEPIK AINILYDGTA
361 STMNLAALNC ATVAGIMKKA NPEVNMVSAP VVAKERGIQI STTNQDKSGA FDGYVKVTVV
421 TAKRERSVAG TVFSDGKPRF IQIKGINVDA EIGAHMLYTT NEDVPGIIGT LGQTMGENGV
481 NIANFTLGRA AAGGEAIALL YVDEPVPAEA RAKLAETGLF NQIKPLEFDV A
SEQDB ID: 3101377FT
Reference:
3101377
Name: DNA polymerase III, Subunit: beta, Class: EC2.7.7.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaN
Sequence:
1 MKISIERGAL LKAVAQAQSV VERRNTIPIL ANVLIEAEGE GAQFRATDLD IEVVDKAPAM
61 IERAGATTVS ATTLHEIVRK LPDGALVTLT ADAAAGRLTV EAGRSNFSLA TLPREDFPVM
121 ASSEYQSNFT ANAAVLRRLF DKSKFAISTE ETRYYLNGVY MHVADGDGGK VLRCVATDGH
181 RLARIDADLP AGATDMPGVI VPRKTVGELR KLLDDDEMDI AVSVSETKVR FATPDITLTS
241 KVIDGTFPDY TRVIPQANTR RLEVDASEFA KAVDRVATVS SERSRAVKLQ LDEDKLVLSV
301 NAPDSGAAEE ELAVAYSDER LEIGFNAKYL LEIASQVDRE NAVFLFNSSG DPTLMREGND
361 QSAVYVVMPM RV
SEQDB ID: 3101377FTA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGVARAFFL VAIVAGLCGM VWGIQMSASQ DHTLSPAHGH LNLLGWVSCS IFAFYYHLVP
61 SAAANPLARL HFGLVVVAVV LLAPGVALAI QGKTELLAKL GSVIMLGSML LFGWIVLKVP
121 GRVTATA
SEQDB ID: 3101377FTB
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFRTFDLNL LRVLDALLST RSTTRAGQQL GMSQPAVSAA LSRLRHALGD PLFIRQGRQL
61 VPTDYAGGLH APLRDLLGQT EALLAGQPDF DPGAATDSLT LSGSDFYAEL LMPRLARHLS
121 HVAPGMRVQL VDLVPDNYVQ SVGQSAVDMA ILPATPTPDW VEERRLHSSH FLAVARADHP
181 EIASAAIAPG AVLPLDLFCS LQHALFSPEG KLHGLGDAAL ARIGRARQVT MTLPVFSGVL
241 NAVSQSDLIA LIPHQLAESV APRLGLSLYH PPIPVGPVEI MMVWHKRAST APAHRWLRDQ
301 IAMLMAELDT PPSIGCGVAA EPGQHTAEQA S
SEQDB ID: 3101377FTC
Reference:
3101377
Name: Ser/Thr protein phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTPIYAVGD IHGQAEQLET ALARIEADGG PDARVVFLGD YTDRGPDSRA VLDRLIAGQA
61 QGRDWITLKG NHDRMFEMFL RDHPAQDDRL LVGYHWLHEQ LGGVETLASY GVPVPEGART
121 YQVHAQARAA VPAEHRKFLA GLSNYHQEGA LLFVHAGIRP GLPLERQVEN DLIWIRHEFL
181 DDPRPHPWLV VHGHTPDKQA AHYGNRINLD AGAGYGRPLA AAVFEGDRCW QLTGTGRQPL
241 TPRA
SEQDB ID: 3101377FTD
Reference:
3101377
Name: Thr 3-dehydrogenase, Class: EC1.1.1.103
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tdh
Sequence:
1 MRSNTMKALE KSKPEEGLWM VQAPVPEIGP DDVLIKIKKT GICGTDIHIW NWDEWAAHTV
61 PVPMITGHEF AGEIVELGRD VTGLSIGQRV SGEGHLIGTE SRQSRAGKFH LDPGTRGIGV
121 NVQGAFAQYL RLPAFNVVPL PEDIPDEIGA ILDPLGNAVH TALSFDLLGE DVLITGAGPI
181 GIMAAAVAKH AGARHVVITD INADRLKLAQ HVVPRARTVD VTREDLGDVV HELGLKQGFD
241 VGLEMSGSQA ALDQMVEALV MGGKIALLGI PPGKSPVDWS RIVFKAITIK GVYGREMFET
301 WYKMIAMLQN GLDVSRVITH RFGVDEFREG FAAMKSGLSG KVVLDWT
SEQDB ID: 3101377FTE
Reference:
3101377
Name: 2-amino-3-ketobutyrate CoA ligase, Class: EC2.3.1.29
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: kbl
Sequence:
1 MSQSFLSHIT DTLAQIEAEG LYKRERLITS PQGGEITVGD RQVINLCANN YLGLADHPAL
61 IAAARDALEP KGFGMASVRF ICGTQDIHRE LEQRLARFLN KDDAILFAAC FDANGGLFEP
121 LLGPEDAIVS DALNHASIID GIRLCKAKRY RYANSDMGDL EAQLKQARAD GARHVMIATD
181 GVFSMDGYLA NLPEITRLAH QYDAVVMVDD CHATGFMGPH GAGTPDHFGL DVDILTGTLG
241 KALGGAIGGY IAGPQPVIDL LRQRARPYLF SNSLPPAIVA AGIEAIRLVE EGADLRARLF
301 ENARYWRAGL TDLGFDLLPG EHPIIPVMLG EAKLAQDMAA RLFDEGVYVS GFFFPVVPRG
361 QARIRTQMNA ALTRDELDRA LAAFATAGKA LGVI
SEQDB ID: 3101377FTF
Reference:
3101377
Name: RmuC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIQIGDQSYS LQDPMVMAVL GGGAALLLIL LMLFLSLRAA NRSARTTEPM AQQLAWLGQN
61 VQQLSMGQEQ LRGGLAHVSD AQANAQVQVI QTVEARLSAV QQHMNDRLAD NAMRAQRAMT
121 EMQEKMSTTL HGNSKQTATS LTQLQERLAA IDKAQDNITK LSGDVLSLQD ILSNKQTRGA
181 FGEIQLNDIV SKALPTDSYS LQHTLSNGRR ADCLIHLPNP PGPIVIDSKF PLEAYEALRR
241 AETPPQLAEA ARQMKAAVRA HIKAISEKYI IEGETADGAL LFLPSEAVYA ELHANFADIV
301 REGFAARVWI VSPTTCMATL NTMRAILKDA RMREQAGAIR KELSLLHKDV ERLGDRVQNL
361 DRHFGQAAKD LSEIKISADK AGRRAQRLDN FDFEELAPDP VPNVVPLGKQ ER
SEQDB ID: 3101377FTG
Reference:
3101377
Name: DNA mismatch repair protein, Isotype: MutL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mutL
Sequence:
1 MVSTDPNIIP AQPEIRQLDE TAINRIAAGE VVERPASAVK ELVENAIDAG ATRIAIDLAD
61 GGKTLIRVSD DGCGMTPDQL PLALARHATS KIDGSDLLNI HTFGFRGEAL PSLGSVGRLT
121 ITSRARGAEA ANIRVSGGRV DPVKPAALRA GTVVELRDLF FATPARLKFM RTDRAEAQAV
181 ADTVKRLAMA EPSVSFTLRD VSGGGEGRLV FRADAETGDL FDALRDRLAQ VMGREFTDNA
241 LRIDTMREGL RLYGYAALPT YSRGAAVAQY LFVNGRPVRD KMLTGALRAA YFDFLSRDRH
301 PAAALFIDCD PTLVDVNVHP AKSEVRFRDP GVARGLIVSA LRHALAEAGH RASTTVAGAT
361 LGAMRPEQTG ARIYQMDRPS PAARMASHQA QAPGFAELSS SYSGRMVEPE PGEDARRAEE
421 PPAETPPESL PLGAARGQVH ENYIIAQTAD GMVIVDQHAA HERLVYEKLK RQMAETGVAA
481 QALLIPEIVE LSTADCARLL DLSDDLARLG LTIEPFGGGA VAVRETPAIL GPVDAGAMLR
541 DILDELADQG ESATLQARIE AILSRVACHG SIRSGRRMRG EEMNALLREM EATPHSGQCN
601 HGRPTYVELK LSDIERLFGR S
SEQDB ID: 3101377FTH
Reference:
3101377
Name: Zn/Mn/Fe ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGSEFVPLS LTPLLIGVLA AVACALPGNF LVLRRQALIG DAISHVVLPG IVVAFLLTGA
61 IAAWPMMLGA AGAAVVAVVL IEAIRRLGRI EPGAAMGVVF TTMFAAGVLL LEQTDTSTVH
121 LDVEHALYGN LESLIWLDAT GWASLLDPVA LAGLPVELSR ILVTLVGVVG FIWLFWRPLK
181 LSTFDEGFAR TLGIRTNLLG LALVIVAAVA AVAAFDAVGS IIVIAMFICP PAAARMMTNT
241 LEGQVGWSVV FAILSAVLGY VLAGYGPLWL GARDAVSAAG MIATMSGLIL ALTARFGPCR
301 SRTGAPVQA
SEQDB ID: 3101377FTJ
Reference:
3101377
Name: Zn/Mn/Fe ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRDALLLQL GYNATLVAVG ATLLGISAGV TGTFLFLRKR ALVSDAISHA TLPGICLAFL
61 LMVALGGDGR SLPGLLVGSA MSAWVGLLCL NWLTRNTRLA EDAAIGAVLS VFFGLGIVLL
121 TVIQTLGAGR QAGLEGFLLG STAGMLWSDA LVIALGGAGT LALILLIRRP MTLVAFDPEY
181 AAARGVPVNR VDLAMMGLVM AVTVVGLKIV GLILIVALLI IPPVTARFWT ERSDRVVLLS
241 GLTGGLAGYL GAAISASAPN LPTGPIIVLV AFAFFALSLL VAPGRGVLAA LLRHGRFQRR
301 VHLRQGLLAL AQGQPIYEPL TLRLLRRAEL VRADGVATDK GRARAAKALR DEKRWQIVRA
361 DLTQEAAAAL YDGLRDIETV LTRDQIAEID SRIGGPQEVP A
SEQDB ID: 3101377FTK
Reference:
3101377
Name: Zn/Mn/Fe ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIELAADKGI RLADETIASS PLAVRGLTVS YGQKPAVFSV DMTVQPGAMT AIIGPNGAGK
61 STLLKAALGI VKPLSGQVTV FGRPLEEQRA RIAYVPQRAS VDWDFPTRVI DVVLMGLYRE
121 LGLLGRLRAR HKAQALDCLA RVGMRDFADR QIGQLSGGQQ QRVFLARALA QDADLYLLDE
181 PFAGVDAATE KAIISVLKSL KQAGRTVVVV HHDLATVSDY FDHVFLINTR RVAEGPVAEA
241 FTADNLQAAY GGRLATAQVD QLARVLG
SEQDB ID: 3101377FTL
Reference:
3101377
Name: Zn/Mn/Fe ABC transporter, Subunit: periplasmic
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRRGFLAAL ALTCSLPLAA WAEAPLRVVA TTGMIADAAR QVGGDLVEVT GLMGPGVDPH
61 AYRQTRSDIV AMTRADLVLW HGLYLEAQME SFFQDLGRKR QVVAVAEGIE PSRLRAHDDY
121 ADKFDPHVWM TPELWREVVA EVERALTETR PEAAETFAAN AARHIADLDR LSGYAETVLA
181 TVPESKRVLV TAHDAFGYFG QSYGFEVLGV QGISTQSEAG LNRIAELVDT LVSRKITAVF
241 VESSVSDRSV RALIEGAAAQ GHQVHVGGEL FSDAMGPDGS YEGTYLGMLD HNITTIAAAL
301 GGQVPTRGMD GKLSAGF
SEQDB ID: 3101377FTM
Reference:
3101377
Name: deoxyribose phosphate aldolase, Class: EC4.1.2.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: deoC
Sequence:
1 MKKDHQAAWL LKAITLIDLT TLSGDDTVGR VRRLCAKARQ PVAPALLEAL GMGPITTGAV
61 CVYHDMIETA VEALKGTGIP VAAVSTGFPA GLSPFHLRVA EIGESVAAGA EEIDIVISRR
121 HVLTGDWQAL YDEMKAFRAA CGHAHVKAIL ATGELGSLRN VARASLVCMM AGADFIKTST
181 GKESVNATLP VSLVMIRAIR EYYDRTGYRV GYKPAGGISK AKDALVYLAL IKDELGDRWL
241 QPDLFRFGAS SLLGDIERQL EHHVTGAYSA GYRHPMG
SEQDB ID: 3101377FTN
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIKELFDTM EYGPAPESAA EALAWLVDQG DRFGHFIDGA FTAPGDGFDS RNPATGEVLA
61 TLTQATQADV EAAVAAARKA QPKWAALGGA GRARYLYAIA RLMQKHSRLF AVLETLDNGK
121 PIRESRDIDI PLAQRHFYYH AGMAQLMESE LPDAEPLGVC GQIIPWNFPL LMLAWKVAPA
181 LAMGNTVVLK PAEFTSLTAL LFADICQQAG LPKGVVNIVT GDGAVGEMIV AADVDKIAFT
241 GSTAVGRHIR EATAGRGLEL TLELGGKSAY VVFDDADIDS AIEGLVDAIW FNQGQVCCAG
301 SRLLVQEGIA DRFYTKLRAR MDGLRLGNPL DKCIDVGAVV DPVQLQTIER MVASNTAGQV
361 HHAACALPEN GCYYPPTLIT GLSTSDPLMQ EEIFGPVLVS TTFRTPAEAV ELANNTRYGL
421 AATVWTENVN LALDIAPKLV AGVVWVNATN LFDAAAGFGG VRESGFGREG GWEGLAAYTR
481 PKGKRKALAR IEPTMGHGAP VDPIDRTAKL YVGGKQARPD GGYSRPVWGK SGLLGHVGLA
541 NRKDVRNAVE AAAGASGWAK TTGHLRAQIL YYIGENLSAR AAEFTHRIDA MTGKRSGAKE
601 VEASIQRLFT AAAWADKYDG QVHGVPIRGV ALAMKEPVGV IGALCADEAP LLGLVSVMAP
661 AIAMGNRVVL AASEPYPLAA TDFYQILDTS DVPAGVVNIL TGSHAELARP LASHLNVDAV
721 WSFSSTDLSA EIETAAAGNL KRSWVNNATS LDWSVDHSKR FLQAATEIKN IWVPYGE
SEQDB ID: 3101377FTP
Reference:
3101377
Name: short-chain oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDFTGKTVVV IGGTSGINRG IALAFARAGA RLAVASRSQD KVNDTVAELR AAGAQEALGA
61 SFDVRDAEAV AAGLQGFRDR LGEFDVLVSG AAGNFPALTA EMSINAFKTV IDIDLMGTVH
121 VMKGAYPHLK RPGASIINIS APQSWLPYEG QAHVCAAKAG VDQITRTLSL EWGPEGIRVN
181 SVVPGFIEGT EGAKRLAPSP EAEKSFKKDV PLGRWGQPQD VANACLFLGS DMASYVSGTV
241 LSVDGALYQR GSGRAGQMIG QMLRAMPKPG
SEQDB ID: 3101377FTQ
Reference:
3101377
Name: peptidase, Isotype: M16 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRAFVAALTA LVLALPAWAE VRIQEVTSPQ GHNAWLVEDH SIPFTALEIW FQGGTSLDAP
61 GKRGATYLMA GLIEEGAGDL DARAYARKLE ELAASFDYDV TDDTLSVSAR FLTENRDEVI
121 DLLGTTLHAP RFDQDAIDRV RAQVLSGLRS DETDPHSIAG AALSEAVYGE HPYATEGKGT
181 IDSVSALTRE DIVAAFKGAL ARDRVYVGAV GDITAEELGV LLDRLLSQLP ETGAPIPERA
241 QVSVPGPVRV VDFDTPQSVA LFVQPGIDRD DPDFFTAYIL NHIIGGGGFE SRLMQEVREK
301 RGLTYGVYSY LLPKDLASIY MGSVASANDK IAEAVNVIRD VWRDVAANGV TAKELEDAKT
361 YLTGAYPLRF DGNGRIANIL AGMQIQGLPI DYIATRNDQV NAVTLEEINT FAAGFLDPEG
421 LSFTVVGKPV GLEGTN
SEQDB ID: 3101377FTR
Reference:
3101377
Name: peptidase, Isotype: M16 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMIRAFALI TALVTAAPLW AAPDGHEAVT TFTLQNGMEV VVIEDHRAPV VQQMVWYRAG
61 SADEPVGSSG VAHFLEHLLF KATDTMEAGE LSATVAANGG ADNAFTSYDY TAYFQRVAAD
121 RLELMMRMEA DRMRNIRLTE RDIETERDVI LEERNQRTEN NPRALFGEQM DAAQFLNHRY
181 GVPVIGWKHE METLDMEDAL SFYRTYYAPN NAILIVTGDV EPEAVRVLAE TYYGVIPANP
241 DLPERFRSQE PPQTAARRLT FKDARVAQPY VHRSYLAPER DAGAQETAAA LYLLAELLGG
301 GTTSYMNEKL QFDSQTAIYT GAFYGGLSLD DTTFDMIVVP AQGVSLSEAE AAMDKVLADF
361 IAEGVDAEDL ERIKMQLRAA LIYERDNVDG IGNRYGAALA SGLTIADVQA WPDVLQAVTG
421 EDIIAAARAV LRPEVSVTGW LTNVEEVTQ
SEQDB ID: 3101377FTT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGARICDKT RRNRQEMTMR APLALIVITT ALAVSGCSSK GLRDIRSQGT GPDEFAIMPV
61 KPLTQPQDFN VLPAPTPGGA NLTDPTPAAD AVVALGGRET ALQAGGGIPA SDQALVNASS
121 RYGVPANTRT ALAEEDAGFR KRQARWTRVR LFPVDRYEQA YRKDAINPFN QNERFRRAGA
181 ATPSAPPESE
SEQDB ID: 3101377FTU
Reference:
3101377
Name: lipoprotein signal peptidase, Class: EC3.4.23.36
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lspA
Sequence:
1 MRARLLFWSA FWAFLIDQIS KYLVVHVMDV AHRGSIEVLP PFLTFRYGEN RGINFGLFQG
61 ESDAARWILI GLSLVICAVV VVWLSRGRPS RWMLIGGGLL IGGALGNVID RLIYGYVLDF
121 LNMSCCGINN PFVFNVADIF IFGGAAALIL LDGKKPS
SEQDB ID: 3101377FTV
Reference:
3101377
Name: bifunctional purine biosynthesis protein, Isotype: PurH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: purH
Sequence:
1 MTDLSPVRRA LLSVSDKTGL IELGQALAAR GVELLSTGGT AKALRDAGLT VRDVAEVTGF
61 PEMMDGRVKT LHPMVHGGLL ALRDNADHVA AMEQHGIAGI DLLVVNLYPF EATVAKGADY
121 DDCIENIDIG GPAMIRAASK NHAFVNVVVD VADYDALLAE MAANDGQTSY AFRQRLAQTA
181 YARTAAYDAA VSNWMADQLA LEAPRRRAFA GELKQTLRYG ENSHQQAAFY TDGSNRPGVA
241 TARQLQGKEL SYNNINDTDA AFELVAEFAP ENGPACAIIK HANPCGVALG ATLSEAYQKA
301 FDCDRTSAFG GIVALNQPLD AETAGKIVEI FTEVVIAPGA SDEAIAIFAT KKNLRLLLTD
361 GLPDPRQPIV AMKQVAGGLL VQDKDVGHVD LTDLKVVTRK APTEAQMADL LFAWKVGKHV
421 KSNAIVYVKD GATVGVGAGQ MSRLDSANVA AAKAQRMATE LGLPESPAKG CAVASDAFFP
481 FADGLLEAAA AGGACVIQPG GSMRDDEVIK AADEAGLAMV FTGMRHFRH
SEQDB ID: 3101377FTW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASRWARFQN RLYARLSQRH KSVRAFVSQP EPRTIGSYAR GRQLVAGNLL FAGYLVESQS
61 SGLWEVEAPN GAFDDERQGF AWLDDLAAVG DVRAREKAQR WLWGWIAEHG RGRGPGWTPE
121 LTGRRVIRWI NHAPFLLRGV EPEQSHAFFR SLGQQTWFLS RRWPGAKPGL GRFEALTGVI
181 YAGLALEGLE ELADPAVRAL ARDCDSQIDK EGGLPTRNPE ELLEVFTLLS WATAALHEAG
241 RGAPHAQTAA IERIAPTLRA LRHADGQLGR FHGGGRGLEG RLDHALAASG VKPVHAEGLS
301 MGYARLSGGR TSVIVDASVP PRGAASYNAH ASTLAFELTS GRRPLIVNCG SGVSFGVEWR
361 RAGRATPSHS TLCLDGFSSA RLAEPERGTG LEALIEGPAR VPVEISEMTD GIRFQGGHDG
421 YAKVFGLTHA RTLELSHDGR GLVGEDMLLA MDDAAKRRFD KAMDASVLAG VGFDLRLHLH
481 PEVDAAVDLG GAAVSMALKS GEIWVFRHDG KYKLSLEPSV YLEKTRLKPR ATKQIVLSGR
541 AMEYATRIRW TLSKAQDTAI AIRDLNRDEP EFD
SEQDB ID: 3101377FTX
Reference:
3101377
Name: ribosomal RNA small subunit methyltransferase, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADSATQARQ SAIDLLDQIL GEGRLLSECL GAGALDRLPP EERARAQRLT LDTLRGLERA
61 DRLLKPHLQK APPLSVRNAL RLGTVELAHG EAAHGVVHSM VEIVGRSRRH GRLKGLVNAV
121 LRKVAADAPS AWGRLRVPRL PRWLRDPLVQ AWGAPAVAAM EAAHFVGAPL DLTLKSGASA
181 PGGEVLPTGS VRLHDAGQVS ALPGFAAGDW WVQDAAAALP VQLLDPQPGE SVLDLCAAPG
241 GKTMQLAAAG ARVTALDISE GRMARVRENL ARTGLSAETV VGDALEQGGQ YDAVLLDAPC
301 SATGTIRRHP DLPLAKDGSE FGALIELQAQ MIAHAWTLVR PGGRMVFCTC SLLPDEGEVQ
361 VEEALTLYPD MSTDRAALGL PGIDPAWITE EGGLRLRPDY WSERGGMDGF YMAVLRKAAD
421 GPE
SEQDB ID: 3101377FTY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEPRPDLPP AAQRALAEAE ERRRKAEAET KPLPKELGGR DGPDPARYGD WEKKGIAIDF
SEQDB ID: 3101377FU
Reference:
3101377
Name: DNA replication/repair protein, Isotype: RecF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recF
Sequence:
1 MALALTAITI SHFRSHRLLR LSLDERPVAI HGPNGAGKTN ILEAVSMFSP GRGMRRASAA
61 EMTRRPEVLG WKLSAELVAG HQRHEIETWS EGGAARQVRI DDKAASQVAL GRLVRMVWLV
121 PSMDRLWIEG PEGRRRFLDR MTMSFEPDHA EAVLVYEKAM RERNRLLREQ VRDAHWYLAL
181 ETQMAAAGHR IHAARQSTLT ALAAAQTQAE TSFPTAELEL IQTEGALPES EGDLREALAE
241 SRFRDLAAGR TLVGPHRSDL YGVYAAKGVP ASDCSTGEQK ALLVSLILAN ARALARQVGA
301 PPVLLLDEIA AHLDAGRRAA LYDEICALGA QAWMTGTGPE LFSELGARAQ TIALCERDGQ
361 SEVVET
SEQDB ID: 3101377FUA
Reference:
3101377
Name: benzoate transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVRPPLQTV STGLVVAIVG FFGSFPIVLQ GLTGVGADAA QAASGLMFAA LSMGISGILL
61 SLWTKAPVSV AWSTPGAALL AVSTLPQDGF GGAVAGFIMA GALTVIAAWW RPLSRLTAAI
121 PGPIAQAMLA GVLFALCLRP FQALAEIPLL ALPILLTWFI ASQISRPFAV PAAVIAGALV
181 VTVNAGFDIP APEAIFAAPV WVTPVFSLEA LTNIALPLFI VTMATQNVPG LAVLRAYGYQ
241 PRPAPLVAGV GAASVLSAPF GSPATCLAAI TAAMCANEES HPDPTQRYWS AVMGGLFYCL
301 LGLFAGVITG FAALAPALVL GTVAGVALLG VFAGSALAAL EDPDCRQAAA VTFLITASGV
361 TILGLSAAVW GLVIGGLMQM ISSRIRRART
SEQDB ID: 3101377FUB
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPLDWLRVF EAAGRLGGFS AAAREFGLTQ AAVSQRIGNL EAWLGRALFV RGPRGVTLTV
61 EGESYLPLVQ ESLSALARST EDLFGTAPTE LRVAGLASHI EALVMPRAAA FLAAHPGVRL
121 MSDSAARRAG LDEERTWLQI RFGRGVWPGR EALLIAPEIL TPMAAPGLGW SAGIIDLRGE
181 RPGWRDWARL AGAMPEGQAR LSVDSMGHAL TAAEQGGGVV LGSLPLARAA MVEGRLCRLQ
241 APEMATRDGY WLTWPTDRLT ARRQRALVEG FHAALIREDL
SEQDB ID: 3101377FUC
Reference:
3101377
Name: gamma-butyrobetaine hydroxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRQVTHTDQ IVTLEFADGT ITRFHAVWLR DNALDPETRA PGNGQRLITI SDIPADLSIG
61 AAALAGDALS LTFLPENKTV TFPADWLAAH AYDRDQEHPI GWTAPGITTW QSGIAAPGAD
121 WTAVHANPAV KRDWLAAVAE FGFARLTGGP TEPGALLRVA DLFGYVRETN YGRYFEVRTE
181 VNPTNLAYTG LGLQAHTDNP YRDPVPTLQI LYCLENSATG GDSIVVDGFR AAERLRDANP
241 EGFALLCGYP ARFEYKGSDG VCLRARRPMI ELSPDGQLVA IRFNNRSSAP FVDIPFDRME
301 AYYAAYRQLA ELIDDPAMGV AFKLEPGESF IVDNTRVLHA RTGYSGAGSR WLQGCYADKD
361 GLLSTLAAME AAGLEAAE
SEQDB ID: 3101377FUD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVDFTTLDR GNIVAFLADI FARRGGEEYL GEPVTMAQHM LQGATIAEQN GLPEEIIVGA
61 LLHDIGHFTS EFGTYHPDDT EDRHHEDAGE AVLAPFFPPV ITDCVKYHVA AKRYLCATRP
121 AYFARLSPAS VHTLELQGGP MSTEEVADFE RNPNLEAIIQ VRYLDEAGKR ADMETPGFDH
181 FAPMVQRMVD RHLLEV
SEQDB ID: 3101377FUE
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIEKRDFYIN GAWVAPAVSN DFQVINPSTE EPCAVISLGS EADTNAAVAA AKAALPGWMA
61 TPVAERIALV EKLIEIYHTR GEDLAQAMSL EMGAPIDMSR SQQVGAGTWH LKNFIRAAKA
121 FQFERPLGDH APNDRIIYEA VGVAALITPW NWPMNQVTLK VGAAAIAGCT MVLKPSEQSP
181 LNAMIFAEMM DEAGFPPGVF NLVNGDGAGV GSQLSTHPDI DMVSFTGSTR AGTAISKAAA
241 DTLKKVHLEL GGKGANVIFA DADDKAVKRG VLHMMNNTGQ SCNAPSRMLV QRPIYDQAVE
301 TAAEVASKVT VGNALDEGRH IGPVVNELQW SKIQDLIQKG IDEGARLVAG GTGRPEGLNK
361 GYYVRPTVFA DANNQMTIAR EEIFGPVLTM IPFDTEEEAI EIANDTPYGL TNYVQTQDAT
421 RANRMARALR SGMVEMNGQS RSAGSPFGGM KQSGNGREGG VWGLEDFLEV KAVGGWAAE
SEQDB ID: 3101377FUF
Reference:
3101377
Name: thiol-specific antioxidant protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLRINDIVP NFEADTDKGR IAFHDWIGDS WAILFSHPKD FTPVCTTEFG AVAQLADEWA
61 KRNTKVIGVS VDGVEDHKKW KGDIESFAGT SAGFPIIADE GLAVSKAFDM LPADAYLPDG
121 RTPADSATVR SVFIISPDKK LQLSMTYPMS VGRNFAEVLR ALDGLQRTYQ QPLATPANWQ
181 TGQDVIVALA LDNAAAEEKY GALDIKLPYL RFAKNPG
SEQDB ID: 3101377FUG
Reference:
3101377
Name: methyltransferase, Isotype: FkbM-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASLKRWLDL RRNPWKAEHY AGLKAWRADD ALKTRFYTYD DLAPGAVVLD VGGFEGGWAD
61 RVLTVQAEAR VHVFEPHPRF ADALRSKFAH RPNVSVHDFA IGGAEGTLTL SDDGDASSAF
121 GGQGGALTAP VRPVGAVFAE LGLDRVDLMK VNIEGGEYDL LPALLDSGLM PRIARLQVQF
181 HLFEPALIET RAAICARLAK THDCAWCYPF IWEEWRLR
SEQDB ID: 3101377FUH
Reference:
3101377
Name: glycosyltransferase, Isotype: family 25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCRIAGQRFR SDLWSGTGPF CFRTVGCPLQ EAERSAEMNL MGLVIHLERA TDRRAQANAL
61 VSQLPFAALL PAVDGAAMGA DARARAVQPG LLKPAYPFEL RPGEIGCFLS HRAAWARLVE
121 SEAEAALIIE DDMALEAGFA DALALAQRNV AQMGYIQFQT RPVTAPAIDQ QGQSVLMQPG
181 LTPLRTSGQL VARWAAERLL ALTEPFDRPV DTFLQMHWHT GLRLGVISPS GLSDRTEVIG
241 GSTIGAKKSL VERLTREWHR ARYRAAVRRL SRG
SEQDB ID: 3101377FUJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPEIDERRAA IVARYAESKN RRDIDAALML CSDRMILHSA SLDMVSTFRG HKAIQAGMLR
61 FYKLFSEYSG ETHTRWQAGI ALVSKGEVTL RVNPDLLADP STSISVVAPF LAVFEFDGDM
121 IAGERYYPGF EYAGILKRLK PAVRMAIAAN RLTSGVFNRA
SEQDB ID: 3101377FUK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQPYEFLPEG FWRKDSPPNA RVKRTVDGQI RRDVVVVGGG YTGLSSALAL AQQGYSVAVL
61 ERGVIGSGAS AYNCGHVGIQ LGKNPYLTLN KLGLERTRMY ADVLTQAIAN VGTIVSQSGI
121 DCHYRAIGNL TAGVSEPQRR DVENTFEACD KVGLPVKMLD RRDLSQMDAP AFVDSAFHEL
181 IGGDIQPALY VQALAKLAED AGVEIYEDCS VTRVNTSGHV RADTANGAVL ADMAVIATNA
241 YSGEIGLLRR SIMPWSVSVM VTEPLTPHQR ACIGWRNGEP IHTPHQMIEN IRLTHDGRIL
301 IGTKRARLGW GDRHPPANDP VTFQLLFEVL RDRFPEIPDL RPAYTWSGRV AISSDLLPFF
361 DHFEGRKNVV IAAGYGGHGL PMASYSGTII ADMLLGNNTD RAALFVNRKR RLPIPPEPLR
421 WVVGHAMKRK MVEADSIIDA AARRELSARR ALPRIVRTTY AGD
SEQDB ID: 3101377FUL
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTQNRREES AAATRQLLLD AAARMFSQQG FAKTSLSDIA ARAGATKGAL YHHFSGKEAL
61 YASCYEQQAA KVAAIVRAAG TSGDPWQDTL EKCRAFLGCA RLRHLNAVPI QEAIIVLGWQ
121 RWRELDSAHT MGELELALAR LSDAGLLGSF DRRLLADSLF AVLVSAMMTL SESRDRAATE
181 AELMRQLSAF LSGVMSASNR PIESEGT
SEQDB ID: 3101377FUM
Reference:
3101377
Name: polyribonucleotide nucleotidyltransferase, Class: EC2.7.7.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pnp
Sequence:
1 MFDVTTKSMQ WGEETLTLES GKIARQADGS VVATLGETRV MANVTFAREQ KPGQDFFPLT
61 VHYQEKYYAA GKVPGGFFKR EARPTEKETL TARLIDRPIR PLFVPGFKNE VLVMCTVLSH
121 DLVNDPDIVA MIAASAALTI SGVPFMGPIA GCRVGYVDGE YVLNPTVDDM QDLRLNPEQR
181 LDLVVAGTKD AVMMVESEAY ELTEAEMLGA VTFAHAQIQP VVDLIVSFAE QCAKEPFDFT
241 PPDYSDLYAA VKAAGEEQMR AAFAITDKQE RTAAVAAARE AIKAALTEEQ LADGNLGSAL
301 KKLEAGILRG DVVKGGKRID GRDTTTVRPI VAETGLLPRT HGSALFTRGE TQGLVVTTLG
361 TGDDEQFIDA LHGNFKSNFL LHYNFPPYSV GEVGRVGSPG RREIGHGKLA WRALQAVLPA
421 PTDFPYTIRV VSEITESNGS SSMASVCGGS LSMMDAGVPL KSAVAGVAMG LILEDDGSYA
481 VLTDILGDED HLGDMDFKVA GTENGITSLQ MDIKVAGITP EIMEKALSQA KDGRMHILAE
541 MNKALSGAAD FSVHAPRIET MQIPTDKIRE VIGSGGKVIR EIVEVSGAKV DINDDGIIKI
601 ASPNGDSIKK AYDMIWSIVA EPEEGQVYTG KVVKIVDFGA FVNFFGKRDG LVHVSQIENR
661 RLNHPSDVLK EGQEVKVKLL GFDDRGKVRL SMKVVDQETG EEIVPEKKEA SEAE
SEQDB ID: 3101377FUN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTILALSRR MDGNASPVRS DAPVLENEAM MTHVIPTAPI EAYKTQARRL RDDLHAAGTP
61 VSHSRALELV AHQHGARDWN TLVAGAGNRL RFSVGDRVSG TYLGQPFTAE IRGLTLLGDG
121 SHRRITLHFD QPVDVVRFDS FSALRQRVSG VIGWDGRSSH CTSDGQPQLI VRPV
SEQDB ID: 3101377FUP
Reference:
3101377
Name: alpha-1,2-fucosyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITTRLHGRL GNQMFQYAAA RGLAARLGTQ VALDTRLAES RGEGVLTRVF DLDLAQPDQL
61 PPLKGDGLLR HGAWRLLGLA PRFRREHGLG YNAAIETWDD GTYLHGYWQS ERYFAHIAAR
121 IRADFAFPAF SNSQNAEMAA RIGDTDAISL HVRRGDYVAL AAHTLCDQRY YAAALTRLLE
181 GVAGDPVVYL FSDDPAWARD NLALPVQKVV VDFNGPETDF EDMRLMSLCR HNIIGNSSFS
241 WWAAWLNAHP GKRIAAPASW FGDAKLHNPD LLPPDWLKIE V
SEQDB ID: 3101377FUQ
Reference:
3101377
Name: ribosomal large subunit pseudouridine synthase, Isotype: A, Class: EC4.2.1.70
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rluA
Sequence:
1 MSDDYNPPQD PLDVLHEDAE LIVLNKPAGL LSVPGRGAHL ADCLLSRVQA AFPGALLVHR
61 LDRDTSGVMV FAQTPHAQRN LGRQFEERKT RKTYVARLWG RLEPKTGTVD LPLIVDWPNR
121 PRQMVCHETG KPAVTDWRVL RYEGDTTRVR LLPRTGRSHQ LRVHCQALGH PILGDPFYAT
181 GAAQAFPRLM LHSEELRLKH PESGRSMTFR APAPF
SEQDB ID: 3101377FUR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPTIARMQE VVAKGDESLI HALLAEDVRF MPPTYYKTWT GRDPVAAVLG HVGQVFSEFR
61 YRRIMGEGKD WALEFQCKVG ELDAVGVDLI TLNEGGLIQD FEVVMRPYKT VGALRDAMNA
121 RVMTDARFLK YREALS
SEQDB ID: 3101377FUT
Reference:
3101377
Name: GDSL-like lipase/acylhydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVLAAQGLA VRRKAQLLPE PAGPRTGRAG SGPQLRLLIA GDSSAAGVGA ATQDEALSGR
61 LVARLAEEFT LDWRLEATTG HTTRDTLDRL TRLGGPFDIA ITALGVNDTT RATSARGFAR
121 RQAALLDHLT GPLGARMVIV TAVPDMALFP ALPQPLAWVL GAQARRLDHA LQRVVQRYPS
181 ALHHHPIIPP DPAMAARDGY HPSPLAYDRW AEGLAALIRA QAVRRICRSI GTE
SEQDB ID: 3101377FUU
Reference:
3101377
Name: RarD protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rarD-2
Sequence:
1 MSDQRPENVD TPKGLALAIT AYLLWGFLPL YMKLLAHVPS IEVVAHRVIW SVPVAGALLV
61 ALGRTRDLRA ALRNPRMLGM ACLTAALISV NWAIYVWSIN NGRALDAALG YYINPLFSIA
121 LAGLFLGERL SRAQIGAILL AAAGVAVLIV QAGELPWAAL GLTFSWGFYA LFKRSLPIGP
181 NQGFLLEVLI LTPFALAYVL WLMAQGQGHF GGFGADSLLL AGAGVVTAVP LLFYANGAKL
241 VRLSTMGILQ YIAPTMIFIS AVALFGEEID RGRMIAFPMI WAALVIYSVP MLRQMRRTA
SEQDB ID: 3101377FUV
Reference:
3101377
Name: FAD-dependent oxidoreductase/aminomethyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADLPTQARV VIIGGGVVGC SVAYHLTKLG WKDVVLLERK QLTSGTTWHA AGLIGQLRAS
61 SNMTKLARYS AELYMGLEAE TGVATGMRQV GSVSVALTGE RLEELYRNAA MARAFGVPVE
121 ELSPAEVKER YQHINLDGVT GGVWLPTDGQ ADPANIALAL AKGARQRGAV VKERIKVTGI
181 AKQGRRVTGV DWISDDGSEQ GHIACEMIVN CAGMWGHQVG RMAGINVPLQ ACEHFYIVSE
241 PIQGLTQMPV LRVPDECAYY KEDAGKMMLG AFEPKSKPWG MDGIPDTFEF DQLPEDFDHF
301 EPILEAAVNR MPMLGSAGIH TFFNGPESFT PDDAYHLGLA PEMDNVWVAA GFNSIGIQSA
361 GGAGHALSQW MDSGEKPFDL GDVDIARMQP FQGNKRYLVE RSTETLGLLY ADHFPYRQKA
421 TSRGVRRTPF HEHLKANGAV FGELAGWERA NWYARPDQER EYRYSWRRQN FFDNVAEEHK
481 AIRTGLGMYD MSSFGKIRVE GPDATAYLNH IAGGQFDVPV GRIVYTQFLN VNGGIEADVT
541 VTRLSETAYL VVTPAATRYA DQTRMMRLVG DFRVVITDVT AGEGVLAVMG PKARELMARV
601 SPNDFSNDVN PFGTAQEIEL GMGLARVHRV TYVGELGWEI YVSSDMAGHA FETLFEAGQD
661 LGMKLCGMHV MDCCRIEKAF RHFGHDITPE DHVLEAGLGF AVKTDKPDFI GRDAVLRKKD
721 EGLKTRMVQF RLTDPEPLLY HNEPLLRDGQ IVGYLSSGAY GHHLGSAIGM GYVPCEGESA
781 ADVLASTYEI DVMGTRVRAE ASLAPMYDPK SERVKV
SEQDB ID: 3101377FUW
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKLVKAETR QKQFDIIVAP GFVLTELAAL VDVLRIANRV CPNPPFAYTY RSLRGGLIES
61 SSGAVVATER VPTPPRADYL FVIGNSDPDQ PELSLGRVVK DYTFRGAQVF LLAEAASRYI
121 NERGTADLAT HWENAAFLRE RGARFDATFS LATQQGPVVT CAGMGATVDV VLSVIGRHIS
181 GPAKMTVADI MLHEHIRDFA TMQPFSGVKT TSTGDEALDQ CIKMMQANIE DPLPIGEIVA
241 ALGLSNRSLE RKFKTYLGTT PNNFYREMRL AKANTLLLNT AMSVREVGLA CGFPNGFSAV
301 YKSFYGITPF VLRRQKRAAA QR
SEQDB ID: 3101377FUX
Reference:
3101377
Name: Hcy S-methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDITLLDGS IGQELVKRAG KRPTPLWSTS VMLEAPYHVG AVHRDYFDAG ATIATTNTYA
61 VLRDRLEPAG IGDRFEALID TALDQAESAR AAHGSGRIAG ALGPLGASYR PDICPPPEEA
121 EALYADSVRA MNDRVDLFLI ETAASVAQAE GALRGASLGT KPVWLSVTVM DDDGSRLRSG
181 EGVGELAAIV KQYQPQAVLV NCSRPEAVAA ALDIIAGFGL PFGAYANGFT RITEAFLESR
241 PTVEALTARV DLTPEAYADF ALGWVDQSAT IVGGCCEVGP DHIAHLARRL RAAGHRIV
SEQDB ID: 3101377FUY
Reference:
3101377
Name: Zn alcohol dehydrogenase, Class: EC1.1.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIPATMSGV YLTRHGGPEA LAWRDDIPVP APGPGQVLVR VQAAGVNNTD VNTRIGWYSS
61 DVTGATDSGE TGEAGGWAGA LSFPRIQGGD LCGRIVALGA GVTGWATGQR VTCQINLPRP
121 TPDNPFGFVA LGSELDGAFA EYCLLYADDL FDVTASPLSD IEIAAMPCAY GTAWNLLARC
181 GVGPGDAVLI TGASGGVGLA AVQLAAHLGA TVTAMTAPAK AEAVTAAGAT TILGRDDTPP
241 PAQFDRVIDV VGGPLWPDLI RALKPGGHYA VSGAIAGPMV SADLRQIYLP DITIHGATYQ
301 PREIFADLIA LINAGAIRPL VSATFPLDQI AQAQAEFMTK RLPGKIVLIP PQEHP
SEQDB ID: 3101377FV
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSAVDLAL YAGAVFVLFL TPGPVWLALT ARTLSGGFQA AWPLTLGVVV GDSLWPVLAV
61 LGIGWITAAS TQIALALKVV AVLVFVTLGI VTIRNADRTI ASDSRLTRPG IWAGFLAGLV
121 VILGNPKAVL FYMGILPGFF DLSDITTIDL VAIVAVSQVV PLVGNLMLAA FVDRVRRVLS
181 SPRALRRMNL TAGGMLIVVG LILPFT
SEQDB ID: 3101377FVA
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDFPNKARV VIIGGGVVGV SSLYHLAKRG WTDCVLLEKN ELTAGSTWHA AGNVPTFSTS
61 WSIMNMQRYS TELYSRLGEE VDYPMNYHQT GSIRLAHTRE RMQEFERACA MGRYQGIKME
121 MLTPDEAKAR YPFLETHDMA GALYDPTDGD IDPAQLTQAL AKGARDMGAK IIRFCPATGV
181 TQQDDGSWIV HTDKGDIACD YVVNAAGYYA QRVGEWFKPY GGRTVPMMVM SHQYLLTEQI
241 PELEAWSKEN GRKLPLLRDV DVSYYLRQEK NGINIGPYEP NCRAHWDVDS DPMPDDFSFQ
301 LWSDDLDRIA DIVADAMERV PVTATAGVSR IINGPIPYAP DGLPLIGPMP GVKNAFEACV
361 FTFGIAQGGG AGKVLAEWIV DGQTEWDMWS CDPRRYTDYT DHDYCVQKGM EVYGNEYAMH
421 FPWHRWPAAP DRKLSPVHDR VKAQGGVMGV YNGWERANWF AQPGDDTSEE STHTWGRSGP
481 WEQRIKEECQ AVRDHCGVLD LPGFSRFLVK GAGAAEALRG LITGGLPKVG RMNLVYISES
541 RGRILTEMSC IRLGEDEFVM ITAATAQWHD RDILLGAMPA GVTVEDVTTT RDTLIVTGPK
601 SREILAGLSD ADLSQGWLTH QAATVAGQPA FLIRVSFAGE LGWEVHALNE HMPAIYDALL
661 GAGAKPFGMW ALNSLRLEKG YRAWKGDLST DYSMLEGGLE RFVKLDKPQD FPGKAAILAE
721 KQRGVKKSFV TLLVEAGDCD APYMSCLWHD GQIVGETTSG AWGYRINASV ALGMVRADLA
781 VPGTELEVEI YGQKCRAVVQ PDAPLWDPEN ERLRA
SEQDB ID: 3101377FVB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKGSCLCGD IRYTTEAAPQ GASMCHCGQC RRQSGGVWSS AFVPEADLTI TGPVSWFAAS
61 DTAKRGFCAR CGSFLFWKAN DEDTISFSLG SVDGPTGLRL TKHIFVAGKG DYYDIADDAP
121 HKD
SEQDB ID: 3101377FVC
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFEAWTIFA LFWILFAATP GPNAVNCISN GMSLPFGKAL LGVLAILTQA SVFLLLSALG
61 VTALITASPT LFLVAKLAGA GFLIWLGIRG WRNAAKPVPT AVRPARHVYL HALAVATLNP
121 KSVAGYLAAF SQFVQPDVPI WQQMGVIMPT ALIITALCYT TFTLLGALMG RAALGAVFST
181 WLRRGMALCF IIYGVLLGTS AAPATRG
SEQDB ID: 3101377FVD
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTQAPSSAT LGADLRALRK ARGLTLSEIA ARLGRSVGWL SQVERDMSEP SISDLRQIAG
61 CLGVPMSMLF AHAAAPAEEQ GYVVRAGARR PMGSGEEGLI EELLSPDLTD DFEMVHSTFA
121 PQSRMQTPAN RPTQEVGYML SGRLELTIGG RQFSVGPGDS FRIRHEPYQW ANPHDEPAVA
181 VWVIAPPVY
SEQDB ID: 3101377FVE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWNAILYLWV LNGLTVALFA WDKLCARWNR GRVPEHLLLW LSALGGSPAA LLSRWLFRHK
61 TRKQPFGRWL WSIVLFQITA LVILLGKDLL
SEQDB ID: 3101377FVF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVDYPSLAK TIAALTEGET DPVALMATVT CEVHHSDDRF NWTGFYRVTE PGVLKIGPYQ
61 GGHGCLRIPF DKGVCGAAAS TGEVQLVPDV DAFPGHIACA SSTRSELVLP VFGRTGALIA
121 VFDIDSDLPD AFTVADAEAL GAILEQVFAQ
SEQDB ID: 3101377FVG
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDDSRAERQ QQIEEAAYTL LEQKGYAGTS MQGIARLARA SNETLYSWYG DKQGLFRALV
61 IRNAAEVRAQ LEADLAAARP PRDTLTALGP RLLSLLLGDR AVALNRAAAA DPSGELGGLI
121 AQSGRDSVMP LIVQVLEAAR AEGLLHFDDA GAAAGLYLDL LVGDQQIRRV IGRLPAPSEA
181 ACQARGAAAV THLCRLLG
SEQDB ID: 3101377FVH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQTDRPCLA ALVILILLQL IMLFSLFAGV PPHPPIATPL FGIGPFIGAS VSAAIAAIVL
61 GESRAARVLA LLAVLGALVS FGPQKYLDPQ FPLIWPAVIA AQLAAITVLV RLLPALSRQD
121 A
SEQDB ID: 3101377FVJ
Reference:
3101377
Name: Ac-CoA C-acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKEVVIAGAA RTPMGGFQGM YDGVSAAELG GAAIRAALAG AGAATVDEVL MGCVLPAGQG
61 QAPARQAGFA GGLGEEVPAT TLNKMCGSGM KAAMIAFDQI ALGQTGTMIA GGMDSMSNAP
121 YLLPKMRGGA RIGHGQVIDH MFLDGLEDAY DKGRLMGTFA EDCAEHYQFT REAQDEYALR
181 SLQNALEAQA SGAFDGEIAA VTVKTRKGEV VTDADEQPKS ARPDKIPTLK PAFRKDGTVT
241 AANASSISDG AAALVLASAE AAAAQGLTVR ARILGHASHA QAPGWFTTAP VPAAKKLLAN
301 IGWSVEDVDL WEVNEAFAVV PMAFMHEMGL SRDKVNVNGG ACALGHPIGA SGARIMVTLL
361 NALEKRGLKR GVAAICIGGG EGTAIAIERV
SEQDB ID: 3101377FVK
Reference:
3101377
Name: anti-anti-sigma factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLTSTVDGD TRVITVNVER IDAAMAIQFK EDMRSETEEG PDRVVLDLSQ VTFIDSSGLG
61 AIVASMKQLG GNRRLDLAGL TPVVDKVFRL TRMDTVFNLF TTLDDALAAS PK
SEQDB ID: 3101377FVL
Reference:
3101377
Name: anti-sigma-B factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFNANRQGF ALNFRATEME AREGIRAVAT QLRQRGLSED RAGDVEIALA EAINNVVEHA
61 YADIEPGQVR IRCQMRDDKL LIRISDQGRP LPDGQLPKGE PANVETDPAD LPEGGFGWFL
121 IRQLVSEIRY ERRQNSNLLS LRFDLPKVS
SEQDB ID: 3101377FVM
Reference:
3101377
Name: gamma-Glu transpeptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRDFHLPGRS PTYATEGMCA TSHPLAAQVA LDLLKRGGNA MDAALAAGLV LGICEPQMTG
61 IGGDCFVLYS RAGEDQIRAL NGSGRAAAGA SAAALREQGL DRVPLGSPHA VTIPGAIDAF
121 CHLAETEGRL GLDTLLQPAI HYAERGVPVA PRVAFDWARE AGTLQGAARH HYLLDGRAPV
181 TGQVFAAPGQ AEVLRRIARL GRDGFYTGEV AEDMLAALNA LGGPHRAEDF GATACTPTEP
241 ISGTYKSTEL VEHPPNGQGA TAILLLNILS QFDIAAMDPL GAARIHIEAE AAKLAYDARN
301 RFLADPDHTD RLDHMLAPET AARLAALIDP KRAMAAAAPL TEAVHKDTIY ITVVDRDRMA
361 VSLIYSIFHG FGSGIASEKF GILLQNRGAG FTLQAGHPNE MAGGKRPMHT IIPGMLREGP
421 GTLTPFGVMG GAYQPVGHAR FASNLVDFGM DPQTAIDAPR AFADAGVLKL ERGYPDAVRQ
481 TLADMGHKVV TPEVPLGGAQ AIRIRADGVL EAASDARKDG CALGY
SEQDB ID: 3101377FVN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMMKSHAKY HLGQVVRHRK HPFRGVVFDV DPQFANTEEW YQAIPEDSRP LKEQPFYHLL
61 AENDQSYYVA YVSEQNLIAD YSGEPVDHPD IPDMFGPFQD GTYPLHFQLN
SEQDB ID: 3101377FVP
Reference:
3101377
Name: auxin efflux carrier family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLAVTVLEI VAPVFLLAAV GFGWVRMGFE YRLQFVTRLG TMLAVPCLIF VALMKTEIPG
61 GDLSRFTLAS ALAILALTVV FGLIVRFSGL DRRTYLPPLL FGNTGNLGLP LCMFAFGIEG
121 LSYAVVFFSL SALWSFSYGI HVVAGQGSLS KVVREPMVWA TLLGALFLSQ DWQTPRFLTN
181 ALELIGQMAV PLMLITLGVA MARLSIRRIG QALGLSLLKL AICFPVGWLV AQGFGLSGPA
241 LGVLVVQMSV PAAVSAYLLA ERFGADADAV AGMVMVSTLL AVGALPLVLA AVL
SEQDB ID: 3101377FVQ
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRSLCALVA VLLLVSCSGG SKNPPRNLDD ACSIAGERPE YIKAFKQTER KWGVPVHVQM
61 STIYYESRYR ADARTPHQFV LGVIPVGRQS SAYGYSQALD GTWDQYRKET GRRGAKRDRI
121 KDASDFIGWY MNKTRERNGI ALGDARNQYL AYHEGHTGYA RGSHNGKSWL LRTADDVAAR
181 ANMYQRQLSS CRRYRG
SEQDB ID: 3101377FVR
Reference:
3101377
Name: outer membrane lipoprotein carrier protein, Isotype: LolA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRIALALAL TLVAPAAWAA DKLPLAEIST YLNGLKTVQT TFTQINDDGS LSTGKLWLHR
61 PGRMRFEYDP PDRSVVLAKG GTVIIHDPKS NQPPEQYPLN RTPLSIVLAR TVDLDRANMV
121 VGHAFDGTAT VVTAQDPENP DYGRIELSFT GDPVELRKWV IHDGAGSRTT VILGQLTKGN
181 SLNQNLFIDG QPGVSVNR
SEQDB ID: 3101377FVT
Reference:
3101377
Name: FtsK/SpoIIIE family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MASYHARSRD PLLDSNMQAA IERRGKELLG LALIVLGLLA AAMVGTYTPD DPNWMVSTDA
61 PVQNWTGRIG ASIAAPLFMI VGGGAWGIPL VLIAWGLRFA LHSGEDRAIG RLVFMPIWIA
121 VVSVYAATLV PGETWRATHS FGLGGLFGDT VMGALLTLVP LGSHLMVKLT SLAMAVVMLT
181 MAAFVLGFTW PEIRRGLRHA MVGAILVYGG VMTLLGRGAS AGVAAARARQ ALRAERREAS
241 RRAAEEARMA EEAAYAEALV EEDDFPEPAP QPKPGLLARM PALIRRSEPM PQPELIEPEP
301 VQGYDVMPGT ERIASKIAAV VRSRKEAAGV VAPPPDPQRP LTKGRGRGPD PLLLDTRRRG
361 DLPAEPPVTA ARAPQATQVQ APVQAAPEQH APVTTVPSAF PDMSQAAGFR AMPTEEFDQD
421 WELEERFEPD PLPTDDAEPY QAAPTPQPQP MPNIPAAQPR KPVVAQPVRR NPVPSRRAQA
481 EAQPTLAFEE SSVAFELPPL NLLSNPTSIQ RHHLSDEALE ENARMLENVL DDYGVKGEIV
541 SVRPGPVVTM YELEPAPGLK ASRVIGLADD IARSMSALSA RVSTVPGRSV IGIELPNEHR
601 EKVVLREILA SRDFGDSNMS LPLALGKDIG GDSVVANLAK MPHLLIAGTT GSGKSVAINT
661 MILSLLYKLT PAECRLIMID PKMLELSVYD GIPHLLSPVV TDPKKAVVAL KWVVGEMEDR
721 YRKMSKMGVR NIEGFNGRVR EALAKGEMFS RTVQTGFDDD TGEPVFETEE FAPEVLPFIV
781 VIVDEMADLM MVAGKEIEAC IQRLAQMARA SGIHLIMATQ RPSVDVITGT IKANFPTRIS
841 FQVTSKIDSR TILGEMGAEQ LLGQGDMLYM AGGAKITRCH GPFVSDEEVE EIVNHLKQFG
901 PPDYIGGVVE GPDDDKADNI DAVLGLNTGG NTDGEDALYD AAVAIVIKDR KCSTSYIQRK
961 LAIGYNKAAR LVEQMEDEGV VSSANHVGKR EILVPEQG
SEQDB ID: 3101377FVU
Reference:
3101377
Name: aminotransferase, Isotype: classes I/II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFPERFSNL PAYAFPRLRA LLDHHPAGGE VVHMTIGEPK HAFPAWVTDV IVENAHLFQS
61 YPPNEGSPEL RGAITDWIAR RYGVTLDPEK NVMALNGTRE GLYNAAMALC PEQKNGQRPI
121 VLCPNPFYQV YMVAAISVGA EPHFVPATAA TGHLPDYASL PVEVLNRTAV AYICSPANPQ
181 GAVASREYWA ELIGLAEQYD FRIFADECYS EIYREEAPAG ALSVAQEMGA DPERVVLFNS
241 LSKRSNLAGL RSGLIAGGPE TLKHVKQLRN YSGAPLPGPL QAAAARVWAD EAHVAENRAL
301 YQEKYALADQ VFAGVQGYQP PEAGFFLWLP VDDGEAASLK AWRETGVRVL PGAYLAQGKP
361 GQNPGETYIR VAMVAPKQDL QRGLIALRDC IYR
SEQDB ID: 3101377FVV
Reference:
3101377
Name: amidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDWLTMTAS DLGRGIAAGR IDPVALTDCY LDAIEAHPDS ERIYARVTAR RARAEAHAAA
61 ERARLGLRRS LFDGVPISWK DLFDSAGVAT ESGSALLAGR VPEADALVLR NATAAGAVCL
121 GKTHMSELAF SGLGLNPITA TPPNPHDPAW VPGGSSSGAA ASVSFGLAAC GIGSDTGGSV
181 RIPSAWHDLV GLKTTSGRLS LEGVVPLCLK FDTVGPLARS VEDAAEALAL LEGGRAADLR
241 GASLKGCRLA VLQTVALDDL REEPGSAFDD ALSRLSAAGA EIVPLEVPEL VDAMALSGVL
301 YTAEAYGLWR DVIEANPDAM YDQILERFRA GAGFSGPDYV AAWARLETCR AAWDGAVAGF
361 DAVLMPTAPI LPPDRDRLLS DHDYYVSENL LALRNTRIGN LMGLSGLSLP TGTPACGLTL
421 LGRPDGEEAL LRVGAAAEHA LT
SEQDB ID: 3101377FVW
Reference:
3101377
Name: ubiquinone biosynthesis hydroxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDNPEPARIV RLMEHRADIA IVGGGLNGPA LALALAQSGQ SVVLVDALPD PLRTDAEFDG
61 RAYALALASQ RLLAAVGVWD HVAEAAQPML EIKVSDGHAG AGPSPFFLHF DHAEIEEGPM
121 GYMVEDRYLR RALLAAMEDA PRITRLNGAA VTAQQTDGTG VVLTLADGSH LRAGLVVGCD
181 GRKSGTATRA GIKRTGWDYG QTALVCAIAH ERPHHGIAHQ FFMPPGPLAI LPLPGNRSSI
241 VWSERTEAAA RINALPEAEY LEILRPRFGD FLGEIRLEGA RFTYPLNLTV ANAFVAERLA
301 LVGDAAHGMH PIAGQGLNAG LRDVGALAEV LILAARRGED IGAAPVLERY QQWRRFDTAT
361 LALATDAFNR LFSNDNPLLR LGRDVGMGVI GAFPGLRRGF VREATGLTGD LPKLMQGRAI
SEQDB ID: 3101377FVX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDRPAAYII CGTPRSGSTL LCGYLAATGA AGDPDSFFRT QSIDWWARYW GLPETLRPGV
61 VGFDRAYLEA ALREGRGETP VFGLRLMREN LGDMLGMLDH LYPGLPGDTA LIEAAFGPTR
121 YLHLRRRDKV AQAVSRVRAE QSGLWHIAPD GREIERLAPH RDPVYDFDAI DSHVRALETY
181 EAGWTDWFLA QGITPLGIDY EDLANTPIEV VSAILAHLGQ DPERAQGLTP AVAKLSGEES
241 RDWARRYRAQ REGRA
SEQDB ID: 3101377FVY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETPAAFDR RMLEALVCPV THATLEYDAG AQELVSKGAK LAFPIRNGIP VMLVDEARPL
61 DD
SEQDB ID: 3101377FW
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRPPQKRRL ETRARLLAEA ARLVEAQGYA GLRVEDVVEA AGVAKGTLFS HFTDKDGLLA
61 VLIGAEVMRL IDGMETAGPP DDLPQLMHRL APLLDFIASD RVIFDLLLRY SGSTGAERNE
121 VVADGFYRQI DLWAGWIAGM QAAGTVRGDH PPALLAEGIQ AFLNQIIAIR FCQGGQATGT
181 PAGALYPFLA AWLIT
SEQDB ID: 3101377FWA
Reference:
3101377
Name: ATP-dependent protease La domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSADLPDTL AVFPLPGALL LPRSRLPLHV FEPRYLQMLD DALRTPQRLI GMVQPNPCRQ
61 DGSKLHQIGC AGRVTQFSET EDGRYMITLT GVSRFRIKSE VDGFAPYRRC TVCWKSFDHD
121 LAAACAPDPR FDRDAFLRLL QRFFEARDMC TDWDSLTQAD DELLVNSLSM LLDFTPEDKQ
181 ALLEAPCLKT RRETLVTLIE FALCGNSGKD PLQ
SEQDB ID: 3101377FWB
Reference:
3101377
Name: thioredoxin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLELGQKAAP AADLIKDTNE ATFMADVVEA SQTVPVIVDF WAPWCGPCKT LGPALEAAVT
61 AAKGAVKMVK VNVDENQMIA GQMRIQSIPT VYAFYQGQPV DGFQGALPAS EISAFVDRVI
121 AAAGGEAPGA QLEEAVVAAE EMLEQGAAAD AAETFAAILG EDPNHAAAYG GLVRAHIALG
181 DLDQAEAILN GAPAEISTKP ELEAAHAQLE LARQASNAGP VAELAAAVEA DPDNHQARFD
241 LAQALHAAGQ TEQAVAELLD LFRRDREWNE GAAKAQLFTI FDALKPNDPI VLNGRRKLSS
301 MIFA
SEQDB ID: 3101377FWC
Reference:
3101377
Name: Leu-rich repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDADKAYAA AERRIEEAKR EGDDSLSFDQ EETHALDHLP PSIAELTELR DLDLNNTQVS
61 DIAPLAALTR LNALSLNDTQ VSDIAPLAAL TRLTMLSLNN TQVSDIAPLA ALTRLTGLWL
121 HNTQVSDIAP LAALTRLTGL SLNKTQVSDI AALAALTRLT TLSLNNTQVS DIAPLASLTR
181 LTTLSLENMQ ASDIAPLAAL TRLIMLSLNN TQARDLRPLR RLTRLVTDPG PIGLTFTNCT
241 AAQQDPEIAR IAKIEDNKTR ARILFDYLED WQPPRNTGPT PAPDPLFPVA EQEGRLEVTA
301 SCPTAEEQED ALKRAMHRSL PALLERLAQM AGNQFPRLAD LARHLVPMLQ DEFEALDMAM
361 IHLALNELRA AERAGAEEGM PFPGPLAALL SSVCDAGGGL TVDHPTVTLL MERARKARDN
421 PDPEQDTAAQ DALSHQIIAG QQAMGDRLRA LESAIVENPS AQAREAQKAV NRNVLWRIAV
481 ISSSMTMVVD AVTGKVLGDL LGQPVVDFVL ANLPTLQNAA LTYGAPFAEW FLSALSKVPE
541 FAALIVNVPD RPDRRQ
SEQDB ID: 3101377FWD
Reference:
3101377
Name: exo-DNase, Isotype: III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPFTLATWNI NSVRLREPIV CKLLAEEGPD ILCLQEIKSP VDKMPVEGFA DLGYRHVVAH
61 GQKGYNGVAI LSRLPIEEVG REDFATLGHA RHVAARLENG VTIHNFYVPA GGDVPDREVN
121 EKFGQKLDYL TEMRDWFHAN APEKSILVGD LNIAPREDDV WNHKQLLKIV SHTPIEVDHL
181 GQVMDSGKWV DITRQDIPQG LLYSWWSYRA KDWSAADKGR RLDHVWATPD ISNAGHSSRI
241 LRDARGWEQP SDHAPVFASF DL
SEQDB ID: 3101377FWE
Reference:
3101377
Name: DNA-binding response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQLKKILLV DDDDDLREAL SEQLVMTEDF DVFEAETGHA ASERTKEAIY DLVILDVGLP
61 DTDGRELCRL MRKQGVKSPI IMLTGHDSDA DTILGLDAGA NDYVSKPFKF PVLLARIRSQ
121 LRQHEQSEDA VFQLGPYTFK PAMKMLITED DRKIRLTEKE TNILKYLYRS TDGVVPRDVL
181 LHEVWGYNAG VTTHTLETHI YRLRQKIEPD PSNARLLVTE SGGYRLVA
SEQDB ID: 3101377FWF
Reference:
3101377
Name: 3,4-dihydroxy-2-butanone 4-phosphate synthase, Class: EC3.5.4.25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribBA
Sequence:
1 MSLIPDITEL LARARADLRM GVPVVLRDEG GDSALALAAE TLTAARLADL RQLGDPVIAI
61 TGRRAETLKA RAYDGDLARV ILPTGADLRW VQAVADPSDD LNTPMKGPLG TMRQGKAGLH
121 RLAISLTKSA RLLPAAVLVA LPEGRTFAAD HGLTTIDHAQ AAPHLSERSP LHVVSAARLP
181 MEVSEAGRLH VFRPEDGGEE HYAVEIGRPD RDKPVLARLH SACFTGDLMG SLKCDCGPQL
241 RGALAQMGAE GAGVLLYLNQ EGRGIGLANK MRAYFLQDQG FDTVEANHRL GFEDDERDFR
301 LGSDILKSLG FKSVRLLTNN PAKIAMMERT GIAVTERVPL KVGETAHNRG YLATKAAKSG
361 HML
SEQDB ID: 3101377FWG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPWDVVLTP RGVRFWGRYL PCSIGKGGIR TDKREGDGAT PVGIHRIVGM LYRADRIAPP
61 APWARPIGPG DLWSDDMGDA AYNHLVSAPY GHSHERLRRS DPLYDLVLVT DWNWPEAEPG
121 RGSAIFVHQW RRPGYPTEGC VAFSRPHLHW LTRRVRPGTR LIIPPL
SEQDB ID: 3101377FWH
Reference:
3101377
Name: Ala racemase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVFFCGKPDR GDDMSLQEIK NRIARAEQAA NRPDGSVKLI AVSKVQPNER VEAVLEQGHR
61 IFGENRVQEA AGKWPAFMER YDGVELHLIG PLQTNKARQA MELVHAIHSV DRPKLATTLA
121 RLAQELGRCP DLFIQVNTGE EDQKAGIMPA EADGFIAECR ALDLPVQGLM CIPPVEEEPA
181 LHFALLAKIA ARNGLSGLSM GMSGDFESAI ALGATHVRVG SAIFGDRVKA AG
SEQDB ID: 3101377FWJ
Reference:
3101377
Name: outer membrane porin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTEGNTMKK VLFATTALIA TASVAAADVR ISGYGRFGLD YNDANDRAVN GVSKTTITSR
61 LRLQFDMSAE TDAGVAFDAR FRAQAESRDN TPGGATFNGA RFGVSYQGFR VNVGNIIGAV
121 ENMPGTYLET RTAGIGIDGA SFYSHVGNVN NEFFNWDAYS SAGTGVNGIE AIYSTGGFTG
181 HLSYSTRNGA VASDRIGVML SYNFGDWTVA AAHQSSDAMW EDKTLVSVAW DGGQFGARVA
241 YADNDGISKF GIYGNMDIGA SSNILLFYTD EEAVSASDVL AGRGDNRDAV AGSNMNEGGS
301 YGIHYSYDLG GGASFEAGYR RASNDNDTFQ AGVYFSF
SEQDB ID: 3101377FWK
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLQNAFKAT LVLALCLGVA ACGNRRAGVR ITDAPPADDS YITNNRESAP TNYEKSSIWD
61 VFGPSKAEQT VQVNRYLWAA SLDVLSFLPI QSVDPFTGVI VTGYGTPPGG GRSYRATVHI
121 KDPALEARSL KVSLQTSGGS PVSAATARAV EDAILSRARQ LRIGDDKL
SEQDB ID: 3101377FWL
Reference:
3101377
Name: Leu-tRNA synthetase, Class: EC6.1.1.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuS
Sequence:
1 MSRYSATEIE AKWQEAWDKA GIFRAARTAD KPKYYVLEMF PYPSGRIHIG HVRNYTMGDV
61 IARYKLSNGF NVLHPMGFDA FGMPAENAAM ASGGHPKDWT YKNIETMVAQ MKPLGFGLDW
121 SRMFATCDPE YYGQQQALFL DFLEKGLVYR KNAVVNWDPV DMTVLANEQV EDGRGWRSGA
181 LVERRELTQW FFKISDMSGE LLDALDTLDD WPAKVKLMQA NWIGKSRGLQ FSWALTEPAH
241 GIEALDVYTT RPDTLMGASF LGISPDHPLT KALEAENPDL AAKVAEMRKG GTTEEAIEKA
301 EKLGADTGLR VRHPLNPDWE LPVWVANFIL MDYGTGAIFA CPAHDQRDLD FCRKYDLPVI
361 DTFVALDDPK PIATEAFVPL KTEKVKWIDH FAGLDVATGQ EAIDTTIDWM EAKGLGTGVT
421 KFRLRDWGLS RQRYWGCPIP VVHCDACGVV PEKKENLPIR LPDDVTFDVP GNPLDRHPTW
481 RDCACPSCGK PARRETDTMD TFVDSSWYFA RFTAPRAETP TDMAEAEYWM NVDQYIGGIE
541 HAILHLLYSR FFARAMHICG HLPEKSKEPF NALFTQGMVT HAIYKTTGAD DRPVYHYPEA
601 VRLEGGKGYL EDGTEVEIIP SAKMSKSKNN VVDPVAIIDR FGADTARWFV LSDSPPERDV
661 EWTDAGAEAA HKHLNRVWNL CDRIAAMDSA APGEGDDDLL REMHKCIRDV TNGIESFGFN
721 ASIAKLYAFT NTLAKSKAGA AAQKQAIMTL AQLMSPMTPH LAEDIWAHQG GEGLIAAAPW
781 PVADEAMLVD ALVTLPVQIN GKRRAEISVP ADMDKTQVEK LALSTDAVQK ALDGAAPKKV
841 IVVPGRIVNV VV
SEQDB ID: 3101377FWM
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWSCNRRTLL MLPVALAACG LQPVYGPGGA GDALRGRVEV SAPDDAESYW LVQNLEQNLG
61 RTAAAGTDYL LDVKVRTASQ GQAITASNDT TRYSIVGTAT YTLTGKESGA VMASGEVRSF
121 TGYSATGSTV DTLAAERDAR HRLMVILSDQ LVTQLYATLD PPA
SEQDB ID: 3101377FWN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLSPREADG YFARPDAGKT GILIHGADAM RIALKRQQII AALLGPGGEE EMRLTRMPGA
61 ELRKDAAQLL DAVKAVGFFP GPRVVFVEDC PETSAPAVLT ALEDWQPGDA QIVVTAGQLK
121 PSSKIRKAFE THPNAYAAGI YDDPPSRAEI ERMLSAAGIR DVPPEPMTVL SDLARDLGPG
181 DFAQTMEKLA LYKLGDTAPL VLEDIAACAP RSTEAALDDV LNVVAEGKEG EIGPLIRRLQ
241 AQGTTPVSLC IGATRHFRTL YTCASAPGGP SQGIGALRPP VFGPRRDRIL NQAQRWGARR
301 LEAALTVLTD TDLALRSAGQ SAPQMALVER AMIRLAWLSR SR
SEQDB ID: 3101377FWP
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYKVYGRVKS RASRVLWLLE ELGQPYEFVD VGPHDPQVKA LNGSGKIPVL VDGDHVITDS
61 SAIMTYLADK HGQLTYPAGT PERAKQDALL HTILDEIDGV LWVAARHGFV LPEDKRVPAV
121 IDCAKWEFER NLARLESRLG APFAMGDKVT IVDILLVHCL NWAFGAGFPI TSDRIKAYGK
181 EMRARPAFQR MGALTPA
SEQDB ID: 3101377FWQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPALVIGAG PAGLMAAGEL ARAGLPVLVA EAKPSVARKF LMAGKSGLNL TKDEPLERLL
61 AAYGDAADWL RPMLAAFDAQ AVQDWARDLG QELFTGSTGR VFPTAMKASP LLRAWLAELA
121 GLGVEIRTRW RWTGWQGDAF CFDTPEGAQK IEPLVTVLAL GGASWARLGS DGAWAGVLGA
181 RGVGLTAFAP ANVGVLVDWS AHMAPLAGQP VKGVAWQAGA LNSRGEAVIS TRGLEGGGIY
241 AVSAAVRQGA PLFVDLLPDL PLEQVTARLA RPRGKASLSS HLRKALKLAP ESRALLMEFA
301 RPLPQAPGAL AALIKRLPVQ HAGLRPMDEA ISTAGGVARA ALDDGLMLNA LPGTFCAGEM
361 LDWEAPTGGY LLTGCLATGR WAGRAAAAWA QAGVNAPMR
SEQDB ID: 3101377FWR
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTVQVERPM ELGTQTQTEL LNNLLVQVER LWDIALGWVS SPAAWSQFAL LVVAYLAALY
61 AARRLRGPLS RLLTPPVEQM DPLSRTRRFV LIFVPLLLPL LAYVFTGIGE SVTRSLFGSG
121 AVIAFGKRVF LFLAARILVR EILDDPLMKL LGRYVLIPVA ALYALGLLEP AMAKLDQTVV
181 PLGNLSFSLL FALRFLVVGG AIFWLGRWSN DQSVNFIKQQ REMRPAMREL TAKAVEIGIF
241 GIAFLLVMNI MGISLTSLAV LGGVIGVGLG FGLQKIASNF ISGVILLLEG QATVGDYVEL
301 DGGEAGTIIK MTARATILET FDGRWIVVPN EDFITTRVVN FSDQGSANRY EAPFSVSYDT
361 DINRVPAIIE AVVATHPGVL AKPFPPDCEL RGFGDSGVDF AVEFWVEGID DGKNKFMSDV
421 LFLIWNALKE NGIEIPYPHR VVELSGSIET RQA
SEQDB ID: 3101377FWT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPMTDKENKC LEFPLPGRLC PLCGRPIPDG DGSQHHLIPR LKGGKGGPTV LLHVICHKEI
61 HATLTEAELA RSFHTIEALR SHPRLAKFLA WVRKRPPGFR SKVPGGRRKR
SEQDB ID: 3101377FWU
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIELEKEGGL WTVTLNRPDK ANSLTVAMLE RLVEIAETAG EARALILTGR GKVFSAGADL
61 EAARAGLATS DLWERLSGAI AALPCLTVAA LNGTLAGGAN GMALACDLRI AVPEAKLFYP
121 VMKLGFLPQP SDPVRMAALI GPARTRLILM AGQKITAQEA YEFGLVDRIV PADQLLETAR
181 ALVADSLAAD PGIAAGIARL CP
SEQDB ID: 3101377FWV
Reference:
3101377
Name: 20-beta-hydroxysteroid dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAVKGKTVL ITGASRGIGA EAGRVFAQAG ANVVLLARSA EALAAQAAEI GDRALALACD
61 VADAAQVAGA VNAAVSRFGG LDVLINNAGV IEPISHLASS DPVGWGHAID INLKGVYYGM
121 RAALPVMRKA GGGTILTVSS GAAHNPVEAW SHYCASKAGA AMLTACLHLE EGHHGIRAMG
181 LSPGTVATQM QREIKGSGIN PVSQLDWSAH IPADWPARTL LWMCGAEADP FLGTEISLRD
241 EDIRKRVGLA
SEQDB ID: 3101377FWW
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVFLRRTSG AVLVYAISTQ IAWADLTADQ VWADWNAYLG GMGYDVAGTE SRSGDTLTIA
61 DFAMSMNMPE QDSAMSFSMP QITLTDQGDG TVRIGLPEEF PLSFTMSVED EAPVTGTVTY
121 ANRNMSMVAS GDPDNITYDY NADQISVRLA SLMADGEAMP ADAISFLMEM TSVSGTSQMS
181 LGEMRDLVQS FTAAGLTYAL SFDDPDSDDA GNFSGTLSDV SYSGSGSLPT SFDATNFSDM
241 LKSGFAFDAL MSYGAGSGNV AAKGDGEEFA WTSSSQGGDF RIAMDAGHVV YDLKGRQSQI
301 SMTTQDLPFP IDLAMAESGF KLDIPTQAGD DPQPFSFGMN LTDFTMSDMI WGMFDPAGAL
361 PRDPATVVLD LSGLATVLVD FLDPTVAETL EATGGAPGEL NELTINQLLV SLVGAKLTGT
421 GAFTFDNSDY ESFGGMPAPS GVANLTLTGA NALLDKLIAM GFVSEDDAMG ARMMMGMLAV
481 PGDAPDTLNS KIEINEQGHV LANGQRIK
SEQDB ID: 3101377FWX
Reference:
3101377
Name: PmbA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGLAAGGGGG YLPDNSKGQP MPHKAEDLSH ALLHAARQAG AEAADALVVQ GTSVSVEVRG
61 GALEHAERSE GTDLGLRVFV GKRQAIVSSS DSRPEALAAM AERAVAMARE APEDPYAGLA
121 EPDQLARGWD LAALNLRDPA AEPDPQALMQ DALAAETAAA AVSGVTQVSD AAAAYGQHHV
181 HLAATNGFSG GYGRSVRSLS CVAISGSGTG MERDADGDSR TYQSDLRSPE EIGRSAGERA
241 VALQGARKPA TGSYPVLFDE RISASLIGHL LAAANGASVA RGSSWLKDNL GEQVLPAALS
301 LIEDPHRPRV SGSRPFDAEG LPTQARAIVE DGVLTGWTLD LASARKLGLA STGNATRGVS
361 GPPSPSNWNL TLTPGTASRD DLIRDMGTGL LVTSLIGSTI NPNTGDYSRG ASGFWVEKGQ
421 IAYPVNECTI AGNLRDMLLG MIPANDARPW LTRVVPSILI EGMTLAGN
SEQDB ID: 3101377FWY
Reference:
3101377
Name: inositol monophosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPETDVDLLI RAAREAGQIA TRYSGRDARR WDKPDGAGPV TEADLAVNAM LAQMLPAARP
61 GYGWLSEETE DTAARLDHDR VFIIDPIDGT RSFAEGSRTW AHALAVADRG VVTAAAVYLP
121 QRDLLFSASA GGGAFLNGAP IRVSAPAHLA QAHILAARPN LQPEHWTGGQ VPAFHRDYRP
181 SLAYRLALVA QGRFDGMLTL RPSWEWDIAA GELILREAGG LCTDRSGAAL RFNNPKPRLD
241 GVIAGGHTVH RGLFGALDPA SAGIAAH
SEQDB ID: 3101377FX
Reference:
3101377
Name: NAD(P)H dehydrogenase, Isotype: quinone family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSTRKIIVLN GHPGQMSLSK SLSEAYAGAA RESGHQVRYH DLSQMRFDMD YGEGGYKNTK
61 PLEPELEAFL ADLEWAEHVV LATPLWWGAI PAKLKGLFDR ALLPGRAFDS RNTNFLGLPA
121 PLLKGRTARV LMTSDTPAML LGLFYSNAIK KVLARQILGF VGIKPARFST FAPATGAEGD
181 RVRKWLRKAA QMGAKAA
SEQDB ID: 3101377FXA
Reference:
3101377
Name: 3-deoxy-D-manno-octulosonic acid transferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARSLSLAAY RVLSWRGVHP PGKDMPARPK GELVWIHVNN RGRFPALCDL SERLVAQRPD
61 LSLLFTIPAD TRVDDWMAPC GLVSVLPEDH PGPARRFLDH WRPDLCLWSG GALKPNLIDE
121 TDSAGIPMLL IDVSERELQA RRHRWLPDLT RTMLDCFDLI LTDGEATARY VRRAGIPPAK
181 VRVSSPLQVS ANPPPWPEEE LVETNATLGG RPVWLSAWTQ PKEFISVLTA HRHALRLLHR
241 LLLIVHVADP AEAEPLRARL EAMDLRCADW DAGDRIEDST QVVISAHAED LGLWYRISPL
301 TFMGSSLEFG TGGRDPLTAV ALGSALLYGP NVRAHMETYV RLASAGAARS VRDAEALGRE
361 VVDLLAPDAA ARMALAGWQV ATETAHLTDS LIEMVQDRLD RRKAVHAST
SEQDB ID: 3101377FXB
Reference:
3101377
Name: tetraacyldisaccharide 4'-kinase, Class: EC2.7.1.130
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpxK
Sequence:
1 MRAPEFWQND PAHPGWQSRL LAPLGALYAR ATARRLAKGD PVSVPVPVIC IGNLNAGGTG
61 KTPSAIWVAE RLRDAGHEPH VVTRGYGGTL EGPVQVDPRR HRAEQVGDEP LLLAAFAEVW
121 VAKDRAAGTR AAAAAGASVI ILDDGFQNPS VAKDLSIVVV DAAQGFGNGR CIPAGPLREP
181 VATGLARADL VLALGDAQAQ EQFRDTWGAA LSVPLVTAEL KPLRTGMDWA ATPVLAFAGI
241 GNPAKFFRTL RAEGADLRRA EALDDHQPLT PALMTRLENE ARLLGAQLVT TEKDAVRLPP
301 AFRSKVITLP VRLEVAEEDR LRAILLAAAP PPP
SEQDB ID: 3101377FXC
Reference:
3101377
Name: thiol/disulfide interchange protein, Isotype: DsbA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRLGTLVFA GVAIAAGAYW LTLPSQGNLP ANPLVGSAEA QQAEIDTSSI VEMVQGAEDA
61 PVEVIEYASY TCPHCAAFHE GPYKKLKADF IDTGKVRFIY REVYFDRYGL WASMVARCAG
121 PEKFFGISDL IYKGQAEWSR AGGPAEIAEE LRKIGRLAGI ENDKLEACLG DATKAQTLVA
181 WYQEHATRDD INSTPSFMIN GKKVENQAYD GFKALIEAEL GN
SEQDB ID: 3101377FXD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGRRSSTRG FKRTASVLGD QIRRTGETRG FAVGRVLTHW AEIVGQDLAA IARPVNIGYG
61 KGGFGATLTV LTTGAQAPML EMQKEQLRER VNAAYGYNAI SRVRITQTAP TGFAEGQATF
121 EHRPKAATSA PRPEIVAEAA RVADGAKDED LRAALERLAQ NVLSRQKS
SEQDB ID: 3101377FXE
Reference:
3101377
Name: A/G-specific adenine glycosylase, Class: EC3.2.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mutY
Sequence:
1 MRDLQHFDVS GALLDWYDRH AREMPWRVGP TDRAAGVRPD PYRVWLSEVM LQQTTVAAVR
61 DYFHRFTARW PTVAALAAAP DEAVMGEWAG LGYYARARNL LKCARAVSEE HGGQFPDSYE
121 GLIALPGIGP YTAAAIAAIA FDRAETVLDG NVERVMARLY DVQEPLPGVK PVLKEHAAAL
181 TPTARPGDHA QAVMDLGATI CTPRAPACGI CPLRAPCLAR QRGTAPDLPR KSPKKPKPTR
241 HGHVYLAQRA DGAWLLERRP DKGLLGGMLG WPGSDWSEAP APSPPFEAQW RELPAEVRHT
301 FTHFHLILRI HTAQLPETMA PDGLVIVDKH AFRPSDLPTV MRKAFDLWRG Q
SEQDB ID: 3101377FXF
Reference:
3101377
Name: fatty acid desaturase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIPTETLARW QSAAPFWLSF LLIPLVWLVA SQGGWWLLAV PLSTWWAFAI YDQVTGLNEE
61 NADPQTGDGA LGWYILLPKL WVPLQFVTLY GLIWYATRAD HLSTLEKIAL FFGVGVITGT
121 IGINYSHELM HQKNRFERWL GDILLAMVLY SHFRSEHLLV HHRHVGTPRD PVTARYNEGF
181 HRFYPRVLVQ CLRSAFRAER EMLARKDRPW TDPANPFWRY WALQGGMLAL AGLLGGWAGI
241 GLFLVQAGIA IWQLELVNYV EHYGLTRKHL GEGKYEHVMP RHSWNAAQKA SNWLLINLQR
301 HSDHHYKPDR RFPLLQNHTE ADAPQLPYGY PVMTVAAMIP PLWRRVMNPR VRAWRKRYYP
361 EITDWKPYNK ALNPAPR
SEQDB ID: 3101377FXG
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDSTVAPPR RERFFFTQPD EFDFDNRFTQ AALTKHKREG LELAVRARWI AMAVIAVLLV
61 FVNPHWDVVY YHAILALLAV NGWFIRRAGR VGQSRLELLL ILIDLLIMTL GMVLPNPLSD
121 DVRPLAMQYR FDNFQYFFVI LAAGTLAYSW RTVITIGTWT AMLWTLGWVI ARWQSEPIAE
181 LSARAQAAFA GFPDVAEQLD PNSFMLQLRV QEVVVFLIVA VTLGVTVRRF NRLLTTNAGL
241 ERERANLSRY FSPNVVDALS QNDEPLKQVR QEDIAVLFID IIGFTRFAAG RDPYEVIEVL
301 RGFHARMEGE VFRHHGTLDK YLGDGLMATF GTPVAGQSDG SNALACARAM AKTIGDWNRE
361 RRRAGEPEIR AGIGVHYGPA VLGDIGANRL EFAVIGNTVN VAAKLETQTR VYDASIVISD
421 DLRRKVLAEG GAILTDGFDE RRDEAIPGMA APMTVWVL
SEQDB ID: 3101377FXH
Reference:
3101377
Name: modification methylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTTKTKGAT ALPLNTIVSG DCIDVMNAMP EASVDLIFAD PPYNLQLKGQ LHRPDNSQVD
61 AVDDHWDQFS SFAAYDQFTR AWLKAARRLL KPNGAIWVIG SYHNIFRVGS ALQDAGYWIL
121 NDVVWRKSNP MPNFRGKRFT NAHETMIWAS KSEGGKYTFN YEALKALNEG VQMRSDWVMP
181 ICTGHERIKD ENGDKAHPTQ KPEALLHRVL VSSTNPGDVV LDPFFGTGTT GAVAKMLGRE
241 FIGIEREEAY RKVAEKRIAK VRKFDREALE VSASKRAEPR IPFGQLVERG MLRPGEELYS
301 MNQRHKAKVR ADGTLIGQNI KGSIHQVGAH LENAPSCNGW TYWCFKRDGK TVPIDVLRQQ
361 IRAELEN
SEQDB ID: 3101377FXJ
Reference:
3101377
Name: RNase HII, Class: EC3.1.26.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rnhB
Sequence:
1 MARNGPPGRG RSSLPFCLSR GVNCGQSRGM TQPDYQLEAA LAAQGHIRIA GVDEVGRGPL
61 AGPVVAAAVV LDPGAIPEGL NDSKKLTAAR RERLYDILHA NAQVSIAEAS VEEIDALNIL
121 RASHLAMERA VAALNPAPDF LLIDGNLIPA GLSCPAEAVI KGDGRSVSIA AASIVAKTWR
181 DRLMVDLAQQ HPGYGWERNA GYPTKEHRSA LQNLGVTPHH RRSFKTVHKI LYQE
SEQDB ID: 3101377FXK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVLWPASSR AVVMGQTCAH PARTSNIAPL LSDIRPAIAL RLLNILGSGR RMQSMRQLSK
61 TLAVLALIAA PASAGAAECY ADYKAKQEQP LRLHYGVMQV SSCSAGQAAP EVAARLQAAG
121 WTLLNVLSVF GPEGLDQRKA DAGPYFLRF
SEQDB ID: 3101377FXL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPDPIFSVSD ARRSGTRLIG FGIGAIVVIL ATAATFLLLT LPDANAFNAR VERVFIENDL
61 TTQAEIRLLE ILAQSGTAFA DTLSSYRMVI FVLLVFASAM MIAALAFLVM LVLLNRRMAQ
121 IERTGIQVTS LLISREENTV YLNNMEFQLT PAAIETLAVL AEARMDDDVL SGAQIEAVIS
181 GRDASDCEEA AGATRIKRLR DTLGNQMISA LLVKNIAKRG YMLAIEKSVI QMV
SEQDB ID: 3101377FXM
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNVHATPRAQ SYEISIEPLE GKVEVYRNDV LLAATTRAKV MYETRLAPTV YIPREDLLVP
61 LGEPSELQTF CPFKGTASYR DLFIGDERIA NAVWSYDTPL PESAGIRGYV GFMPQAHTRI
121 ELGDNTLQEA AGGHVSGPLV DWLLRGAASF RTAEEFTRAL AEKMLDHGIA VSRLSVLAWS
181 LHPLIAGKHY IWEKGKAEIS TYAPTYEIHD HPAFTNSPLR HVSNGLGGVR QRLADGPTET
241 EFPIMQELRA QGATDYVAMP MPFSDGRINV LTLSCDHPDG FTTANLGLIF ECSAVIGRFY
301 EVFMQRENAQ SLLETYVGKR SGARVLGGEI RRGDGDEIDA AIMFCDLRGS TRLEEELGRG
361 PYIGTLNRFF ETVSEIVHAH DGEVLKFIGD AVLAVFPAGV DAQSAHRQAM ASATEIVTAL
421 GQPSEGALAL ECSIGLAYGR VTYGNVGSKE RLDFTVIGQA ANIAARLGDY GKAVGHRIVV
481 SEDIESACSN CLPLGEVALH NVSHPVTCYA VEVDRAKLPA KQPEC
SEQDB ID: 3101377FXN
Reference:
3101377
Name: flagellar protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSYQPVLISG GIAGWRFLQR TYDAQAQSFS NSTVRNRESS YFMEKIGQVK TAEDLVSDRR
61 LLQVALGAFG LEDDLNNTYF VRKILEDGTT SSDALANKLS DKRYREFSKA FGLGPGEIRT
121 TGLVTFMEDI VAKNEAAGFE QAVGAQDETM RIALYAQHEL KALADDRSSD NAKWFSLMGI
181 PPLRKMMETA LGLPSGLGSV DIDKQLEIFQ DKLQRLTGSP QVSQFTDPEM VEKVTIAYLA
241 RSQINSQFAG SSAAQNALTL LGNLR
SEQDB ID: 3101377FXP
Reference:
3101377
Name: flagellin synthesis repressor protein, Isotype: FlbT
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGLVLKLAP KERVLINGAV IENGDRRGRL SIMTPDANIL RLRDAIHPEE ATTPVRRVCY
61 AAQLVLSGDS DPDQAKMSLL RRIEELSQVF TDPDSRKALA QATEALVADH PYKCLKALRT
121 LLPREERILA LRPQ
SEQDB ID: 3101377FXQ
Reference:
3101377
Name: flagellar protein, Isotype: FlaF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNALLQARQA YSAASAPTRT PRNMEYEVLS RITHRMHSAA KRGRAGFGEL VEALHENNRL
61 WGVLAANVAE GENALPPDLR ARLFYLAEFT QVHTSKVLRR EASPRPLLEI NTAVLRGLRQ
121 GGARE
SEQDB ID: 3101377FXR
Reference:
3101377
Name: flagellin protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSILTNNGA MVALQTLKSV NMNLGQTQNA ISTGKNVATA KDNSAVWAIS KVMESDVKGF
61 KAIKDSLSLG ESTVAVARNA AETVTDLLTQ MKGKIVAAQE DNVDRNKINA DVTALKDQIS
121 AVVGAAQFNG LNLVDGTAAS ASVLSSLDRD NAGNVTASSI TVTGQNLSTG GYTAKAVFDA
181 TNTDGVSADG QDTFGFSLDA NGGTDDNGQI EFEPQGTAAY AAGDSFTIRL GDTEVNYTVT
241 AEDIASTSQA DVIAVGMKAA IEASGANVTV DYNAANSGRL VITNDGTDSL QVSGQFSNAN
301 SGGLGALAAI DVSNSAGAAA ALGSIETLID TSIDAAAAFG SVQGRIETQK TFISNLTDSL
361 KSGIGSMVDA DMEEVSARLQ ALQVQQQLAV QSLSIANQAP QSILSLFR
SEQDB ID: 3101377FXT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDNEDLDDLI TSLDELLELE RGALVRGELD QLGRMTDEKE RLVERINAAP ELRRDQLSPL
61 HQKVTRNQAL LNSALEGIRA VANRMSELRR VRQGLETYDS AGQKHRFATP AKTRLEKRA
SEQDB ID: 3101377FXU
Reference:
3101377
Name: flagellar protein, Isotype: FlgJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDISTTVPIE PRSGKATSPD SALRAVAVEL EATFLAEMLK ASGLGKARDA FGGGAGEEQF
61 SSFLVRQQAD QLAKSGGIGL AESLFNALKE SQNGQ
SEQDB ID: 3101377FXV
Reference:
3101377
Name: flagellar hook-length control protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRLATKEIR MTGLTSSNIL PLAGQTAKPG APAPQADPRS GRTHGDFAAV FQEGITAAPP
61 QENAVTKESD TAVAEEETLT GEQTESLKDG AKVKDRGAPM ALAPQQEPPR ASRSQSSDRK
121 ENAHRGDTRS AERLNTAPNV ADQAAQTRQT ERPRSTRVSN ENSVSTTLVR PDQPGHSAAR
181 RELPADPWLR FRFSSVSEAA PQERVVSKVY DRSEKPHPAG TPQELPVGDG QMRLAPSQAQ
241 GAGPSTAPGT IHFAAPQSKN APADSDRERM HEGGETARKI SIQTRDPSQF NPVPTAEEIS
301 LAVATSSEAV ANASARSESA SASPAAKGMA RAYPGESELT GPLANQRSQP GRRDHAAEAV
361 PVGPARSTSQ EQRISSLPPQ RGQSRPPRAG HTDSAPMAPA ATGAASPATP DRKTEPLGEM
421 LPVQAKVRDG APRLQQEQAI GGKEARQPIR VFAQSKGAPD QRMTQFQAAP TPVAVGISDR
481 LVPAQSAASQ TGAPVAQPAS GGVDEREMPR PSAQDDIQTR PLVIAERKAG APNTNPDQLP
541 TTPESSGPKD RTVRVSDTAL SPREPAPPLR ETALQPREVA PLLRVAAPLP HEVAPPLREA
601 ETPPREAISP RGEAPMPLRE VASPPLQPGV RTSQAAQPAV FGTVAPHQAS VVQVGVRSGP
661 AMEHRPDQPL DIALAAPTTS GISPAAAPPA TPAEAARQIA GQLATAVTNQ PDSGSIEIAL
721 DPEELGRVQM NLKTRGDILT LTIATDRPET LDLMRRHIDQ LATEFREMGY KDIAFNFGGS
781 QTDARGGGHG QPGDDAHAGQ PLDIEHTGTT PDRPRISAGG LDMRL
SEQDB ID: 3101377FXW
Reference:
3101377
Name: basal-body rod modification protein, Isotype: FlgD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgD
Sequence:
1 MVETVHSTRP GATSQAPQTT TPEKRSLSSD FDTFIRMLTT QAKYQNPLEP LDSSEYAAQL
61 AQFSMVEQQT KTNDTLTALV EKLGATDMAK LSNWIGKEVR AVAPANFDGT PVTISPAPLA
121 AADKAFLVVR DAKGETVERY QVPVSADPIS WSGLNDDGEP RDNGLYSFAV QSYKADELLL
181 EEAAAVYHPV SEAQIENGEV ILILEGGQAI LANMVTGVRA NG
SEQDB ID: 3101377FXX
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEQTEHIPPP GLVAQLRERS LLQTGDRFET LYGGRTNRVW RLHGPADDLV VKLYRRDFDN
61 PLFGNDAQLE ALCLDRLEGT GLAPQLRASG ALGQEAWVVY DHAPGAPWRT DPAIAARMLA
121 NLHRRALDIP APAGCNGSAA IRTHAEAILS RCDQPDRELL LKARPHTATI APGPACLIHG
181 DPVAGNLLVS GDQAILIDWQ CPAIGDPAED LAMFLSPAMQ QVYRGAPLTA AEEQQFLSAY
241 DNAGTVARYL SLKPWFHWRM AAYCRWRARN GAPDYAPAFE LEHAALAAC
SEQDB ID: 3101377FXY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRIFSDYAY GNGPRAGCWW DETIAAPDWP VAAGDIRADV AIVGGGFTGM SAALHLAENG
61 VSVAVFEAEA PGWGASGRNG GFCCLGGSKL SDAQKRRRYG AEGTRAFDEA EKEAVQLAAS
121 LIERYGIVAD THSRGETQLA HNARAMDALR RQADAGHGRL HEKHDLASEG LNGEFHGGLT
181 SDVGFALNPR KYLFGLAAAA TGSGARMFRN SPVIRIEQGA RGHVLDTPLA RVEADTVLIC
241 TNGYSSEDMP PWLAGRYMPA QSSVMVTRPL TEAELQAQGW TSDQMAYDTR NLLHYFRLMP
301 DRRFLFGMRG GLLSSPRSEA GIRVRLRRHF DTMFPAWTGV EATNLWSGMV CLSRALMPYV
361 GPVPGSPGLF AGLAYHGNGV AMGTYSGRAL ARLALGADPG LPQAMQAPLT RFPLGRFRRA
421 IMPPVYLVLG LGDL
SEQDB ID: 3101377FY
Reference:
3101377
Name: DNA gyrase, Subunit: B, Class: EC5.99.1.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gyrB
Sequence:
1 MSEIEQPGNE YGADSIKVLK GLEAVRKRPG MYIGDTDDGS GLHHMVYEVV DNGIDEALAG
61 HADHVTVKIH ADSSVSVADN GRGIPVDIHA EEGVSAAEVI MTQLHAGGKF DSNSYKVSGG
121 LHGVGVSVVN ALSDWLELRI WRHGKEHVAR FERGDTVEHL RVVGECGDRT GTEVRFLAST
181 TTFSNLDYVF ETLEKRLREL AFLNSGVRII LIDERPAERI ETELFYEGGV REFVKYLDRS
241 KSPVMPAPIY FKGERDDIGV EIAMWWNDSY HETVLPFTNN IPQRDGGTHV AGFRGALTRT
301 INNYAQSSGI AKREKINFTG DDAREGLTCV LSVKVPDPKF SSQTKDKLVS SEVRPAVENL
361 VNEKLAEWFE ENPNVAKQIV GKIIEAALAR EAARKARELT RRKTAMDVNY LAGKLKDCSE
421 KDPSKTEVFL VEGDSAGGSA QTGRDRRTQA VLPLRGKILN VERARFDRML GSQEIGNLVM
481 ALGTGIGRDE FNISKLRYHK IVIMTDADVD GAHIRTLLLT FFYRQMPELI EGGYLYIAQP
541 PLYKVARGKS EVYLKDQAAL DDYLIHQGVE GAVLKLGNGE EIVGQDLTRV VEEARQLKRV
601 LDAFPTHYPR HIMEQAAVAG AFVAGAVDAD LQGVADKVAA RLDLIALEYE RGWLGRITQD
661 HGIRLARILR GVEEVRTLDG PMLRSGEARK TGSFTRSLQE IYTQPAMLVR RDRTQAIHGP
721 LTLLKAILDE GEKGLTLQRY KGLGEMNPEQ LWETTLDPDA RTLLQVRVND MVEADDIFTK
781 LMGDSVEPRR EFIQQNALSV ENLDF
SEQDB ID: 3101377FYA
Reference:
3101377
Name: putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potI
Sequence:
1 MNRMSWFNTV SLTLGFAFLY IPMLILIVYS FNESKLVTVW AGFSTKWYGE LFQNDAFLNA
61 AWVTLKVAVM SSTLATILGT MAALVLVRAG RFMGRTLFSG MIYAPLVMPE VITGLSLLLL
121 FIGIGLDRGV MTIVLAHTTF AMCYVSVVVS SRLVTFDRSL EEAALDLGCS AAEAFRLVTL
181 PIIAPAVISG WLLAFTLSLD DLVIASFTSG PAATTLPIKI FSAVRLGVSP EINALSTIMI
241 GIVTVGVISA SLISKQALVR QKRDEQAAAR G
SEQDB ID: 3101377FYB
Reference:
3101377
Name: putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potH
Sequence:
1 MDSHGGCAAG KLMRRFLLIA IPYAWLLVLF LVPFVIVLKI SLSDAAIARP PYFPQFDWAE
61 GVMAFVRELD FENFIFLTQD DLYWKAYLSS LRIATTATLL TLVAGYPIAY AMARAPEEWR
121 PTLMMLVILP FWTSFLIRVY AWMGILSNEG YLNQILLWTG IINEPLTILN TNTAVYIGIV
181 YTYLPFMILP VYSALDRMDG SLIEAAEDLG CSRAQAFWLV TIPLSRPGII AGCFLVFIPV
241 LGEFVIPSLL GGSGTLMIGK VLWEEFFSNR DWPVASAVAV VLLLILVVPI VLFQRNQQKQ
301 AEAEK
SEQDB ID: 3101377FYC
Reference:
3101377
Name: putrescine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potG
Sequence:
1 MQSSTFAPWE DPNAKPLIRF KNVTKRFGEF TAIDNLTLDI FEREFFALLG PSGCGKTTMM
61 RMLAGFETAT EGVIELAGQD IAPVPPNKRA VNMMFQSYAL FPHLSVWDNI AFGLRRDRKS
121 KAEIEARVEE MLRLVRLEKF AQRKPHQISG GQRQRVALAR SLAKAPKLLL LDEPLGALDK
181 KLRQDTQFEL MDIQEKTGTT FVIVTHDQEE AMTVASRVAV MDQGQLMQVA TPDRIYETPN
241 SVYVADFIGD VNIIEGRATP EGEDGYRIDW AEGQPALTAK SATRFDKGQK CHLAIRPEKV
301 AISAERPADA ANAVQGRVHD IAYLGNLSTY YVELADGTII KAQTSNTRRI SRRSFTWEDT
361 VWLSWTATAG VLLAN
SEQDB ID: 3101377FYD
Reference:
3101377
Name: putrescine ABC transporter, Subunit: periplasmic putrescine-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: potF
Sequence:
1 MTFKSLTLTA VVALASSTAF AEEVRVYNWS DYIDEELLAK FEAETGITLI YDVFDSNEVL
61 ETKMLAGGSG YDVVVPTGTF LQRQIQAGAF QKLDLSKLPN HANMWDQIES RTAQYDPGNE
121 YSINYMWGTT GLGVNVGKVR EVLGEDAPMN SMDLVFNPEN MEKLASCGVH FLDAPTELIP
181 ATLKYLGENP DSHDADVIAK AEPVLMAVRP YIQKFHSSEY INALANGDIC VAIGWSGDIL
241 QARDRAAEAD NGVEIEYHAF KQGSLMWFDQ MAIPVDAPNP DAAHVFLNFI MDAQNMAAAS
301 NYVYYANGNK ASQEHLVEDV IGDTAIYPDA ETMDNLYTTT PYPAKIQRTV TRLWTKVKSG
361 T
SEQDB ID: 3101377FYE
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKKGASVSA QSEAKQPVHE QVYQMLRARI LFGELAPGQA VTIQGLTDSL GVGMTPVREA
61 IRRLMSEGAL SFQGNRRVSV PVLTQNDLQQ VIFVRKSIEA ELARRAAERM TPKAVAQLVT
121 LDEALDMAID SGDVGGYLRS NYDFHALLYQ VADAPILTEM AERLWLRFGP SLRVVCGRFG
181 TQNLPDRHKE MLDALRAGDV DGVARAMEQD VEQGMEQMAG VLAENA
SEQDB ID: 3101377FYF
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATITNHMPT AELQALDAAH HLHPFSANNA LGEEGTRVIT RARGVWLNDS EGEEILDAMA
61 GLWCVNIGYG RDELAEVAAR QMRELPYYNT FFKTTHVPAI ALAQKLAELA PGDLNHVFFA
121 GGGSEANDTN IRMVRTYWQN KGQPEKTVII SRKNAYHGST VASSALGGMA GMHAQSGLIP
181 DVHHINQPNW WAEGGDMDPE EFGLARAREL EEAILELGEN RVAAFIAEPV QGAGGVIVAP
241 DSYWPEIQRI CDKYDILLIA DEVICGFGRT GNWFGTQTMG IRPHIMTIAK GLSSGYAPIG
301 GSIVCDEVAH VIGKDEFNHG YTYSGHPVAA AVALENLRIL EEENILDHVR NVAAPYLKEK
361 WEALTDHPLV GEAKIVGMMA SIALTPNKAS RAKFASEPGT IGYICRERCF ANNLIMRHVG
421 DRMIISPPLV ITPAEIDEMF VRIRKSLDEA QAEIEKQGLM KSAA
SEQDB ID: 3101377FYG
Reference:
3101377
Name: polyamine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYGELALTTR TSSDTFVEFE RVQKSYDGET LVVKDLNLTM PKGEFLTMLG PSGSGKTTCL
61 MMLAGFETAT HGEIKLDGRP INNIPPHKRG IGMVFQNYAL FPHMTIAENL SFPLEVRKIG
121 KSDREAKIKR ALDMVEMGAF GGRRPAQLSG GQQQRVALAR ALVFEPELVL MDEPLGALDK
181 QLREKMQFEI TRLAHELGIT VVYVTHDQTE ALTMSDRVAV FNDGVIQQLA PPDELYEQPA
241 NSFVAQFIGE NNTLEGEVQE IRDGIAVVRL DDGGLIDCKP VNVSRPGERT RVSIRPERVE
301 FNKSRLQKGV HTLKAEVMEF IYMGDIFRTR VRVAGNDEFI IKTRNAPDQV RLEPGAQIEI
361 GWLPEDCRAL DA
SEQDB ID: 3101377FYH
Reference:
3101377
Name: polyamine ABC transporter, Subunit: periplasmic polyamine-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLKTALLAT ALTSAAFAVS AQEVTVMSWG GAYTKSQVEA YHKPFTAETG IKVNSVDADN
61 PATPIKAQVE AGNVSIDVAD VEFSDAVRLC DEGLLEEIDP AILSAAPDGT AATDDFIDGA
121 LQDCAVANIV WSTSVAYNTA NVSMAPSSIA DFFDTGKIPG KRGLRKSAKA TLEMALMGDG
181 VPANEVYDVL DTDEGVDRAF AVLDRIKSDI VWWEAGAQPP QLLADGEVVM STAYNGRIFN
241 AAVAEGQPFE IMWDGQILDF DLFVVPKGAP NKDAAMQFIA FSTSTQALAD QAKWISYGPA
301 RKSSGALVGL YQDGKTEMAP HMPTSEAALK NALVNNFEFW VDKDAELNER FNAWLAN
SEQDB ID: 3101377FYJ
Reference:
3101377
Name: polyamine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDIAQPLTT ADGKPLKGAL LRAQARARRR AFLLVLPLLA FILITFVFPI GQMLYRSVYN
61 EGFTWHEDVT SGDRTPLMTN LADWFDANPP GTVPDEAAFA ALAADLVTLR DLKAPGQAGT
121 RINYELSGSR SMFTKAARSA KKLEPPYKEA ILELDKDWGN PELWQAMRGA SSSYTTNFYL
181 AAIDRERDAS GAVTMVPENR QVYVKLFMRT LTLSLLITFL TFILAYPIAH LLATLPLRHS
241 NLLMILVLLP FWTSLLVRTT SWMVLLQSQG VLNDTLVGLG ILGDDGRLQL MYNRAGTVIS
301 MTHILLPFMV LPLYSVMRMI NPSYVRAARS LGATSWTAFR RIYFPQTVPG IGAGALLVFI
361 LAVGYYITPA LVGGADGQLI SNLIAFHMQK SLNWSLAAAL AALLLAGVLL LYWLYDRLIG
421 IDNLKLG
SEQDB ID: 3101377FYK
Reference:
3101377
Name: polyamine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALPKHASPL ERVWHYTYLV ICALIFLFLI APILVIIPLS FNAEPYFTFT EKMLSFDAEG
61 FSTRWYDLLL TFGMLEPEAP RDGSWWADAW ANAQWIQATK NSIIIGFFST ILATTLGTIA
121 ALGLSRPEMP GRRAVMAILI SPMIVPIIIT ATGLFFFYSS IGIQDWGIPY LGIILAHATL
181 GIPFVIITVT ATLVGFDHSL TRAAANMGAD PVTTFFKVQM PLILPGVISG ALFAFVTSFD
241 EVVVVLFVGG LDEQTIPRQM WNGIREQISP AILSVATILV VISIALLTVV ELLRRRSEKL
301 RGLSPG
SEQDB ID: 3101377FYL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFLIPFLLL AAPVLADPPA IEKVTAHQSG DGWRFDVTLR HPDTGWDHYA DGWRVLDMQG
61 RELGMRTLFH PHETEQPFTR SLGGVVIPEG TAQVQIEARC NVDGWAPLRL VVDLP
SEQDB ID: 3101377FYM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWIDRALAF APLDYLAVAV LLAGWMWIGW RIENPAPGRP SVSALMADFR RDWMRQMVTR
61 QPRVFDAQLI SIMRQGTSFF ASTAVIAVGG GLALIGNTDR LSDIAQDLAI TSAPALVWEV
121 KILIVLLFLS NAFLKFVWAN RLFGYCAVLM AAVPNEPEDA RCLPRAAQAA EICITAARSF
181 NKGLRSTYFA LASVAWLIGP LALIGAGVLT VAVLYRREFA SHSRAVLLTL PAEGRLDTAS
SEQDB ID: 3101377FYN
Reference:
3101377
Name: glycolate oxidase, Subunit: GlcD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glcD
Sequence:
1 MDMPTPNPTV LAKKPRLVQR LRQVLPDDGV IDDLSETRAY ECDALTAYRC PPLLAVLPAS
61 TQEVSDVLRI CHEEGVPVVP RGSGTSLAGG ALPTADSVIL GVARMNEVLE TDYDNRVIRV
121 QSGRTNLSVT GAVEAEDFFY APDPSSQLAC AIAGNIAMNS GGAHCLKYGV TTNNLLGVTM
181 VLMDGTVVEI GGAHLDAGGL DLLGVICGSE GQLGVVTEAT LRILRKPEGA RPVLMAFDSN
241 EVAGACVSDI IKAGVLPVAI EFMDRLCIEA CEAFAKAGYP QCEALLIVEV EGSEAEIDDQ
301 LTRIIEIARR HNPLELRESQ SAEESARIWL GRKSAFGAMG QINDYMCLDG TIPVSALPMV
361 LRRIGELSQE YGLKVGNVFH AGDGNMHPLI LFDANKPGDL EKCEAFGADI LKLCVDAGGC
421 LTGEHGVGIE KRDLMLHQYA AEDLEAQMAV KDVFDPHWLL NPAKVFPLSV SESRRAVQVA
481 AE
SEQDB ID: 3101377FYP
Reference:
3101377
Name: glycolate oxidase, Subunit: GlcE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glcE
Sequence:
1 MLRPESEAEL AQIVAGLTAP VRIRGGGTRG VPGPKAELDI SGLSGITLYE PGALTLVAKA
61 GTPVAEIEAA LAAEGQRLAF EPVDHRGLMG TGGTPTIGGV VAGNISGPRR IQAGAARDFL
121 LGVRYVDGLG QVISNGGRVM KNVTGYDLVK LMAGSWGTLG VLSEVSLKVL PKAETQTTLA
181 ISVPDAASAV RALSAGLGSP YEVTGAAYDP ALGQALVRIE GFEASVAYRA EALSRLFAPF
241 GTVARLEDDP WPGIRDVAPF HGREGDVWRI SVKPGDAPEL AARCKAEALL FDWGGGLIWA
301 LMPEGADLRG RLGEFAGHAT LIRGDRRQHA MFQPESAPLA ALTRGLRQRF DPKGHFNPGL
361 MG
SEQDB ID: 3101377FYQ
Reference:
3101377
Name: glycolate oxidase, Subunit: Fe-S
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glcF
Sequence:
1 MQTNFTAEQL TDPGIQRANE ILRSCVHCGF CTATCPTYQV LGDELDSPRG RIYLIKDMLE
61 NSRIPDAKTV KHIDRCLSCL ACMTTCPSGV HYMHLVDHAR EYIEQNYRRP FSDRALRWIL
121 SRILPYPTRF RLALLGAKIG RPFRGLLPDA RLRAMLDMAP KHIPPVSRND DPQSFAPAGA
181 RKKRVALMTG CAQKALNTDI NDATIRLLTR LGCEVVVAEG AGCCGALTHH MGRTDESHAT
241 AAKNIRAWVR EMDGAGLDAI VINTSGCGTT VKDYGHMFRN EPLADEAARV SSIAMDISEL
301 LIKLDLPEGT DKGLTVAYHA ACSLQHGQKI KTYPKDLLKR AGFKVVEPAD SHLCCGSAGT
361 YNLMQPEISG KLKARKIRTL EAKKPDLIAA GNIGCMMQIG SGTELPIMHT VELLDWATGG
421 PQPPAMTAPG KRAPEVPILR
SEQDB ID: 3101377FYR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHVSASIGH AMTLSATRSW LVLAGLALGV TVTNGFARFA YGLLLPAMKS EMQWNYAQAG
61 WLNTANALGY IAGAVLTMMA IRRVGPVRLF ITGLIATTLA LLATGANAEL WWQTSWRILA
121 GFFGAMSFST AGTLTAGLFR NDPRRNALAI AILFGSGGGL GIVLAGAALP LFLEAYGPAA
181 WPLAWYLIGG ASLTFLPLAL WAAVQQRAPV QSQAGHAPLP LRRMLPELAG YAGFGLGYIV
241 YLTFLSAWMT EQAASAPFIA LVWVILGLCI SVSPLVWRPV LARYASGLPL AMILTGIAVG
301 SALPVVLPNG PALLLSAVVF GLSVFMAPGA VTNFARQNLP PESWGRAISL FTVVFAVAQT
361 LGPYGAGLVG DLVGDIGISL LVAAGLLLAG AAIASRQKPL
SEQDB ID: 3101377FYT
Reference:
3101377
Name: trypsin domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRISAKKPRP RPIFALCAPY PEAQPQEAEV RVRTSILAFV LAAVSTIAGA QDSGLTSLET
61 TDAGRSWLAV GRLDIDGTGF CTGALIAPDL VLTAAHCLYD KTTGQRIDPA RIEFLAGWRR
121 GRASAYRRVA RAVHHPDYLY EGAVTAERVR NDLALLKLSQ PIRNTTVVPF ETGNRPMRGD
181 AVQVVSYAHD RAEAPSLQEA CAVMARQQGV LVMSCDVDFG ASGSPVFSLS DSTPRIVSVV
241 SAKAEVDGAR VALGTSLDDT LTFLMGELDS HKRAEIPTVP RVNRLSASGQ GSASGAKFVR
301 P
SEQDB ID: 3101377FYU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGLIALALA ALLVTPALAQ NSGLRRLTDR DDLFGWEAVG RLDIAEQGFC TGTLIAPDLV
61 LTAAHCAFDG RTGAHYRAGE ITFRAGFRDG TSVADRRVVQ IVTPSEFRAS GAVSAERIRV
121 DVALMRLDDP VPTALADPFA LHSGDVSGSE ISVSSYGRGR AEAISRQRAC QMLWRQQGLI
181 AFDCDVTFGS SGAAILAREG SRGRVLSLVS AGGVVDGRSI GYGMELADTV ATLKQKLRAN
241 APAPAANIRR LQVGGSLSSG TSGAKFLRPG GS
SEQDB ID: 3101377FYV
Reference:
3101377
Name: heat shock protein, Isotype: Hsp20 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSFDFAPLH RASIGFDQIA DLMDRVMSSD VGQPSYPPYN IEKTAADAYR ISIAVAGFAE
61 TDLSVEVKEN ALVISARKAA DEAERTFLHR GIATRAFERR FTLADHVRVT GASHENGMLH
121 IDLKREIPEA LKPRRIEIAS VKSADTPERI EAKAVN
SEQDB ID: 3101377FYW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEICDPKLA EAFAAFPAGP RAGLLKLRAL ILRSAAELPQ AQPLQETLKW GQPAYLAPRG
61 STLRLGCPRQ GGFALYVHCQ SRLIPDYLEQ FEGLDRIEGT RAILFRSADE IDPIRHGWLI
121 RRALTYRVRR
SEQDB ID: 3101377FYX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTLITFPKA FGLYSASPFC VKAAYLLTLA GEPWQRQDQT DPRRMPHGKL PVLRTPERLV
61 PDSDGIRAWL ESRGAEFDRG LTDAQRASAR ALIHMAEDHF YPYLVLDRWG NDAVWAIIRD
121 TFFGEIPRLL RKPVTNRIRA QVLRGLDFQG MARFSEAERR DRVERSFEAV TALLWQKPFL
181 FGDAPTGADL SVAPMLAAMR ATPVATPLQR RVAGDRVLSD YIDRMDATLP LT
SEQDB ID: 3101377FYY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKTARLFQL MQALRSGPAP HTSTALAQDL GVSPRTIHRD IDALRGLGAV IDGEAGFGFT
61 LIEDATLPPL GFTDDELEAL VLGLREAELI GDPALSQAAS AALRKLQGRL PPRQSHRLSH
121 AVLTATRFDR PQPPTIPVAE LRAAAWDEMA VSFDYTDMHG AATSRTVYPL SIVYMDRSSV
181 LIAWCLLRKD VRVFRLDRMR DLVITGQSFR PRRVPMLRDA LAQIRAQQA
SEQDB ID: 3101377G
Reference:
3101377
Name: non-canonical purine NTP pyrophosphatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRAFDGDTL LIATHNKGKL EEMAHLLQPF GVKVVGAAEM NLPEPEETED TFVGNARIKA
61 HAAARATGLP ALSDDSGITI DALDGAPGVY TADWAETGNG RDFLMAMTRA HDALEAKSAP
121 HPRLAQFRCT LVLAWPDGHD EVFEGVAPGH LVWPIRGAAG FGYDPMFVPE GYDVTFAEMD
181 RWEKNKISHR ARAVEKFVKG CFGG
SEQDB ID: 3101377GA
Reference:
3101377
Name: transcriptional regulator, Isotype: RtcR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rtcR
Sequence:
1 MRNVVIGFLG TQLDSGKRKR WKPSVSLCNQ PDFPVDRLEL LYDQKFLRLA ENVRREIEVT
61 SPKTEVLLRQ LNLSDPWDFQ EVYGKLFDLA RDYGFDEDRE RYFVHLTTGT HVAQICWFLL
121 TESRHVPAKL AQTGPPRDEK DGPGKLDIID LDLSRYNALQ QRFDLLAREY SDLLKGGIET
181 KSAAYNAVID RIELVASSSD APILLLGDSG TGKTELAQRI YELKLQRRRV KGRLVQINCA
241 TLRGSSALAT LFGQRRSHTG QAGSERSGLL HEASGGVLFL DEVDELGLDE QAALLHAIET
301 GRYYPLGSDH EVTSRFQVIA GTSRDPVHLT AEGRFRPDLL ARLNMWSFRL PALRDRREDI
361 EANLIFELAR AERELGTQVG FNTDARDLFL RFARDPATLW PGNFRDFGSA IRRLCTLAPR
421 GRITRAMVEE EIKGLRTGWQ RAAGDGDHRL LIGILGNQAA EIDPFDRVQL AEVIRVCRTS
481 ASLSEAGRRL FAVSRTQRRT TNDADRLRKY LQRFGLEWAM IAE
SEQDB ID: 3101377GAA
Reference:
3101377
Name: peptidoglycan-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRFLTSLAL CLGGSVAAET PATLIPAVAQ SLRPVLRPDL LTPVSQDIEA QFQTWLIEFR
61 ARALTLGITP ATLNAALPGL SYDAEVVRRD RNQAEFTKTI WDYLDTAVSE ARIANGRKAV
121 ARHRDLLARI EARWGVDRHV VAAIWGLESA YGAVRGGDST LRSLASLAFD TRRAEFFEGQ
181 LIAALRILDS GDARLRDLRG SWAGAMGHTQ FMPTSYQEHA VDFTGDGRRD IWSDDPSDAL
241 ASTAAYLKAN GWVSGQPWGI EVLLPKGFDL TTARRELTRM PSDWAAAGVR DLEGRAVPDH
301 GPASILLPAG HSGAAFMIFD NFAVIETYNT ADAYVIGVGH LADRIAGGGP IRGNWPRADR
361 ALTLDERIEL QERLTAAGFN TQKIDGKIGP LTINAVRDYQ LDQGLAPDGY ASLRVLERLR
421 SAS
SEQDB ID: 3101377GAB
Reference:
3101377
Name: Phe-tRNA synthetase, Subunit: beta, Class: EC6.1.1.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pheT
Sequence:
1 MKFTLSWLKD HLDTTASVDE IAEALTDLGL EVEGIENPAA RLAGFTLAHV KSASQHPDAD
61 RLRVCVVETN EGEKQIVCGA PNAREGITVV LAKPGDYVPG IDVTLSVGNI RGVESHGMMC
121 SERELELSDE HDGIIELPSG EVGERFIDWL AENDPAKVDP VIEIAITPNR PDALGVAGIA
181 RDLAARGIGT LKTRAYAPVP GDFDCPIKVT IDEDTRDGCP LFTGRLIRDV RNGPSPQWLQ
241 DQLRAIGLRP ISALVDITNY MTYDHNRPLH VFDADKVKGN LRVHRAAGGE TLKALDEKEY
301 TFQPGMMVIS DDEGAESIAG IMGGDATGCT EETVNVFLES AYWDNVQIAL AGRALKINSD
361 ARYRFERGVD PAYTLEGLEH ATQMILDICG GEASTVVIAG AVPDHSRAYK LDAERVRSLV
421 GMDIPESEQR QTLTRLGFRL EGNMAHVPSW RPDVQGEADL VEEVARIASL TKLVGRPLPR
481 LTDGVPKPVM TPQQRRLSMA RRTAASLGYN ECVSYTFIDQ ASAALFGGGT DATMLENPIS
541 SEMSHMRPDL LPGLLAAAAR NQARGFADLA LFEAGPVFHG GEPGEQRAQI AGLLVGRTGP
601 KDVHGAARAV DLYDAKADAE AVLAAMGAPA KVQILRDGDG WWHPGRHGRI CLGPKKVLGV
661 FGELHPRVLQ AMDVKGPAVA FVLWPEEVPL PRKSGTTRAA LALRDLQAVE RDFAFVVDAG
721 VEALTLVNAA AGADKALIED VRVFDEFIGG SLGEGKKSLA ITVRLQPTET TLKEKDIEAV
781 SAKIVEKVAK ATGGTLRG
SEQDB ID: 3101377GAC
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDLTKLDWN HIRAFLKTAE TGSLSAAARR LDLTQPTLSR QVAALEQDLG VMLFERIGRT
61 LVLTDAGADL LEHTRAMGAA ADRVALAASG QAQSIEGRVR ITASDVMSAY VLPEALRRIR
121 AQAPRLEIEV IAANDIRDLM RREADIAIRH VRPEQPDLIA RLVREATAHF YAASGYLDRR
181 GRPVTKDDLA THDFIAFGDV TEMLGHLTPL GLPLTRANFR LGSQSGVVAW DYVRQGFGIA
241 PMDDGVAAAT PGVERVLPQM EPLLFPVWLT AHRELHTSRR IRLVFDILAE YLTG
SEQDB ID: 3101377GAD
Reference:
3101377
Name: methyltransferase, Isotype: UbiE/COQ5 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVDSTTFWNK VAEKYARTPI ADMTSYDYTL ERTAAHLKPG DRVLELGCGT GSTALRLAPD
61 VAAIVATDIA PAMLAVGRRK AREQGVENVD FVEAPAKTPP EGPFDAALAF NLLHLVDDLD
121 ASLAAIHDRL KPGGLFISKT FCIGTGRNSF KLYAIRLALP VMQLLGKAPP VTFLTEAELD
181 NAITRAGFDL VEQESFPAKD PRRFLVARRR
SEQDB ID: 3101377GAE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPAAPHPRL APKRMKESGM TLNVYLSGEI HTDWREQIVA GAKGLDLAFS GPVTDHAASD
61 DCGVAILGAE PDKYWHDHKG AMVNAIRTRR GISDADVVVV RFGDKYKQWN AAFDAGYAAA
121 LGKSIIVLSP PEHQHALKEV HAAALAVAET PAQVIAVLRY VLTGALPA
SEQDB ID: 3101377GAF
Reference:
3101377
Name: transporter protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALHWRILIL LFLVRCTMAF QFATIGGIGP VLSDTYTLDI AGLGWIVGLY FLPGVVIALP
61 GGGIARWFGD ERVILFGLAL MTAGSLIMAL QPSLSVFSAA RLMAGIGGIL MNVLMSKLVL
121 DWFANRQIAT AMVIFINSWP AGIGLSLVVQ PWLAAQGGVA LPFAVETGLI ATALVAFFLF
181 YRRPDTAPAT SGAPARAMPQ GAVLGAVLVA GFSWGAFNAS LAALLSFGPT SLVDRGMSLE
241 LAGLSISIVS WTVVVTGTFG GWLTDRTGRP AMVLLTGLSL FGLALFLFPR VPPMLITMAL
301 IGLLSGVPVA GLISLPARVL KPEQRAIGMG LFYTVYYACF AILPGLGGKW AESAGTVSAA
361 FEFAAFVIVL AILGVFVFLP LSRRV
SEQDB ID: 3101377GAG
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFDLAEFPVS QRWPATNPDI LQFYSFPTPN GVKVSIMLEE IGLPYEAHRV TLSDADVKSP
61 EFLSLNPNNK IPAIIDPDGP DGQPLALFES GAILLYLAEK SGKLIGEIAA DRARITQWLM
121 FQMGGVGPMF GQLGFFYKFA GAEIEDPRPR ARYVAEVKRL LAVIDAQLEG RDWIAGDYSI
181 ADIAIAPWLN TLAFYGAQDL VGWQNHPNAV AYLERFLARP AVQRGLTIPA REG
SEQDB ID: 3101377GAH
Reference:
3101377
Name: large-conductance mechanosensitive channel
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mscL
Sequence:
1 MLQEFKTFIA KGNVMDMAVG IIIGAAFTAI VKSLVDDLIN PIIGLFTGGV DFTNNFVVLG
61 GDGTAYASLA AAREAGASVF AYGAFFMAVF NFLIIAWVVF MLVKAVNRAK EAAAKEEAAA
121 EPAAPAGPSE LDVLLEIRDS LKR
SEQDB ID: 3101377GAJ
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDYLNQAEV IWPLLVSAAK ALVVLILGWT LAGTIAGLVR RRINATPQID PTLGNFTASL
61 VKWAILAMVL VAVLGIFGIE ATSIVAVLGA ASLAIGLALQ GTLSDLAAGV MLVVFRPYKL
121 GQFVDIGGTS GTVRDLNLFT TELVTPDNVQ IIVPNGQAWG AIITNYSAHD TRRVDLVFGI
181 DYDDDAGKAM EIIERTASAD SRVLADPAPW VRVTNLGDSS VDLTARIWCR AEDYWELKFE
241 LTRRVKEAFD AGGISIPYPH SVEIHKEA
SEQDB ID: 3101377GAK
Reference:
3101377
Name: translation elongation factor Tu
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tuf-2
Sequence:
1 MAKEKFERSK PHVNIGTIGH VDHGKTTLTA AITKYFGDFK AYDQIDGAPE EKARGITIST
61 AHVEYETDSR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VNAADGPMPQ TREHILLGRQ
121 VGIPFMVVYM NKVDQVDDEE LLELVEMEIR ELLSSYDYPG DDIPIIRGSA LHAMNGTEPS
181 MGEESIRALM AAVDEYIPTP ARAVDQPFLM PIEDVFSISG RGTVVTGRVE RGVINVGDSI
241 EIVGIRDTKT TTCTGVEMFR KLLDRGEAGD NIGALLRGID REGVERGQVL CKPGSVTPHT
301 KFEAEAYILT KEEGGRHTPF FANYRPQFYF RTTDVTGTVT LAEGTEMVMP GDNVGFTVEL
361 IAPIAMEDGL RFAIREGGRT VGAGVVSKII E
SEQDB ID: 3101377GAL
Reference:
3101377
Name: translation elongation factor, Isotype: G
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fusA
Sequence:
1 MAREYPLNLY RNFGIMAHID AGKTTCSERI LYYTGKSHNI GEVHDGAATM DWMEQEQERG
61 ITITSAATTT FWERTEDGAT ADTPKHRLNI IDTPGHVDFT IEVERSLAVL DGAVCVLDAN
121 AGVEPQTETV WRQADRYKVP RMVFVNKMDK IGADFFNCVR MIEDRTGARA VPVGIPIGAE
181 TELEGLVDLV TMEEWLWQGE DLGASWVKAP IRDSLKDMAE EWRGKMIEAA VEEDDDAMME
241 YLEGNEPDVP TLRKLLRKGT LALHFVPVLG GSAFKNKGVQ PLLNAVIDYL PSPLDVVDYM
301 GFKPGDEEEV RNIARRADDN MAFSGLAFKI MNDPFVGSLT FTRVYSGVLK KGDTMLNSTK
361 GKKERVGRMM MMHSNNREEI DEAFAGDIIA LAGLKDTTTG DTLCDAKDPV VLETMTFPDP
421 VIEIAVEPKT KGDQEKMSQG LARLAAEDPS FRVETDIESG QTIMKGMGEL HLDILVDRLK
481 REFKVEANIG APQVAYRETI SKEVEHTYTH KKQSGGSGQF AEVKLVITPT EPGEGYSFES
541 RIVGGAVPKE YIPGVEKGIK SVMDSGPLAG FPVIDFKVAL IDGKFHDVDS SVLAFEIAAR
601 MGMREGMKKA GAKLLEPIMK VEVITPEEYT GGIIGDLTSR RGQVSGQESR GNAIAINAFV
661 PLANMFGYIN TLRSMSSGRA QFTMLFDHYD PVPQNISDEI QAKYA
SEQDB ID: 3101377GAM
Reference:
3101377
Name: ribosomal protein S7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsG
Sequence:
1 MSRRHAAEKR EVLPDAKFGD KVLTKFMNNL MIDGKKSVAE RIVYNAFDRV ENKIKRAPVE
61 VFHEALDNIK PSVEVRSRRV GGATYQVPVE VRPERREALA IRWLIAAARN RNENTMEERL
121 AGELLDAVQS RGTAVKKRED THKMAEANKA FSHYRW
SEQDB ID: 3101377GAN
Reference:
3101377
Name: ribosomal protein S12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsL
Sequence:
1 MPTIQQLIRK PRQPKVKRSK SQHLEQCPQK RGVCTRVYTT TPKKPNSAMR KVAKVRLTNG
61 YEVISYIPGE SHNLQEHSVV LIRGGRVKDL PGVRYHILRG VLDTQGVKDR KQRRSKYGAK
121 RPK
SEQDB ID: 3101377GAP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDSRDMQAIG LCRFSYPAIG GFQVEHETIE ERISYLYAED RLEERFQLLE TVALPCLREQ
61 TDQNFELIVV IGDTLPKRHG DRLHDLTSDM PQVRIVVEPP RPQRELMKEL LNSARTDPSK
121 PCLQFRYDDD DAVSVDFIER FRNALNDCRG LVTTNRTVAV DFNRGYVAEL GADGIAATET
181 VRTLYVASLG MYVKGGCRLT IMNFAHEKIG RFMPVISISD VPMWVRSHNG FNDSRQKKVK
241 PVPVVPLTED QKAEFAARFA IREDHVKRVF SGG
SEQDB ID: 3101377GAQ
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQVLGLCRFS YLGLGGFKVM HETLEERRAY LYAPARMEDR FRQFEAVTLP SVTGQTDPDF
61 EFLVVIGECF PDSYRARLED LVRGVPQVRI RAYPPLRHRT AMAQALDDHR RDMDAPCLQF
121 RLDDDDGMAR DFVARYREVA ADTEALWRKH PAVAVDFNTG YVFRCGKRGI EISPFQFAYS
181 AIALGVIVAP GHREGIMHFG HHKLWTVMPT ITVPGEDMML RGHNEFNDSR AKPGAKQFSY
241 QPLDADEEAY FKARFNVDNA RVREIFSAPM P
SEQDB ID: 3101377GAR
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGSQCAASE PVPAHSLWRG QDMSPNMRGA LLMTGSMAAF TCNDTVVKLL GSEMPLFQIL
61 VLRSGLSAVW IYFLARRLGA LHLRFGRRDR MLVALRCLSE IGATYFFLTA LLNMPLANVT
121 AVLQMLPLTV TLGAALFFGE QVGWRRMLAI GLGFCGMLLI VRPGPDGFTL HAIYAMAAVI
181 CVTARDLVTR RMSSHVPSLT VTLATALSVM SFGLVGSLTV DWVPLTTDLG LGLLAASLLV
241 LGGYLFSVMV MRIGEVGFVA PFRYSSLLWA LVLGWLVFGD WPDPLTMAGV ALVVATGLFT
301 LFRERASRHR G
SEQDB ID: 3101377GAT
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARAAGAGYR GIMRLKSNLP PLPLILLLWL AGLGAAGQFA KIAVPFDMVR QLYPDAGAGQ
61 GWLLSVISVF GILFGMMAGV LVGRYGSRRL LVAGLALGAL MSFWQSAQPG FGAMLASRMI
121 EGLSHLAIVV AAPTLIAQIA PDPLRNFAMT LWSTFFGVAF ALVAWIGLPW AQVHGVTGLF
181 LFHGATMAAL AVAVWFLLPA DTVAAGGETS LRPHALLARH LSAYGSPRIA APAAGWLFYT
241 LTFVSLVAIL PPLLPMHLQA TIVGVMPLTS IAVALLVVTP LLRRWPAPGV VMAGFGLSAL
301 VLSGFWLGVP TPVLCVLLFA TLGLVQGASF AAIPALNASA QDRALANGAL AQMGNLGNTL
361 GTPVLLLVLA GWGTGGLLAV VILIYLAGIA LHLWLWRRRL RE
SEQDB ID: 3101377GAU
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDSRPRELP GFGPRLRRLR RARLMKQSTL AEALDTSQAT VSRWEAGAQL PDPKTRHRAL
61 DLLTRNVCDD AVLRRLVEHS RDCVHLVDEA NHVCLAYSPA RARQWGQSQR ALLGQSLWPF
121 ATVEIQAAEA ALDGSDWWDS QVPRPRLFHT SRRVYDALTV VEGGLLWERL YLADGTPVRL
181 CSHAPSPHN
SEQDB ID: 3101377GAV
Reference:
3101377
Name: DNA-directed RNA polymerase, Subunit: beta', Class: EC2.7.7.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoC
Sequence:
1 MNQELTNNPF NPLTPPKVFD EIKVSLASPE RILSWSYGEI KKPETINYRT FKPERDGLFC
61 ARIFGPIKDY ECLCGKYKRM KYRGVVCEKC GVEVTLQKVR RERMGHIELA APVAHIWFLK
121 SLPSRIGLML DMTLRDLERI LYFENYVVTE PGLTDLTYGQ LMTEEEFMDA QDQYGMDAFT
181 ANIGAEAIRE MLSQIDLEAE AEQLRADLAE ATGELKPKKI IKRLKVVESF LESGNRPEWM
241 VLTVIPVIPP ELRPLVPLDG GRFATSDLND LYRRVINRNN RLKRLIELRA PDIIVRNEKR
301 MLQESVDALF DNGRRGRVIT GANKRPLKSL SDMLKGKQGR FRQNLLGKRV DFSGRSVIVT
361 GPELKLHQCG LPKKMALELF KPFIYSRLEA KGLSSTVKQA KKLVEKERPE VWDILDEVIR
421 EHPVLLNRAP TLHRLGIQAF EPILIEGKAI QLHPLVCSAF NADFDGDQMA VHVPLSLEAQ
481 LEARVLMMST NNVLSPANGA PIIVPSQDMI LGLYYLTLER EGMVGEGKIF GSIDEVQHAL
541 DAGEVHLHTK ITARIAQIDD EGNEVLKRVE TTPGRVRLGA LLPMNNKAPF ELVNRLLRKK
601 EVQQVIDTVY RYCGQKESVI FCDQIMTMGF REAFKAGISF GKDDMVIPDD KWGIVDETRD
661 QVKDFEQQYM DGLITQGEKY NKVVDAWSKC NDRVTEAMMS TISADKRDEN GAVMEPNSVY
721 MMAHSGARGS VTQMKQLGGM RGLMAKPNGD IIETPIISNF KEGLTVLEYF NSTHGARKGL
781 SDTALKTANS GYLTRRLVDV AQDCIVREHD CGTDRGVTAE AAVNDGEVVA SLAERVLGRV
841 AADDILRPGT EEVLVAAGQL IDERMADAIH EAGVQTSRVR SPLTCESEEG VCAMCYGRDL
901 ARGTMVNQGE AVGIIAAQSI GEPGTQLTMR TFHIGGVAQG GQQSFQEANQ DGTITFENPQ
961 LLLNASGESL VMGRNMKLLI KDAQGEERAS FKLGYGSKLF VKDGAQIKRG DKLFEWDPYT
1021 LPIIAEKAGT AKYVDLVSGI AVRDETDEAT GMTQKIVIDW RAAPKGSDLK PEIILVDSDG
1081 EPVRNDAGNP VHYPMSVDAI LSIEDGQVIE AGDVIARIPR EGAKTKDITG GLPRVAELFE
1141 ARRPKDHAII AEIDGYVRFG RDYKNKRRIS IEPSNEAMEP VEYMVPKGKH IPVQEGDFVQ
1201 KGDYIMDGNP APHDILSILG VEALANYMVK EVQEVYRLQG VKINDKHIEV IVRQMLQKWE
1261 ISDSGDTTLL KGEHVDKQEF DAANEKTIAR GGRPASGEPI LLGITKASLQ TRSFISAASF
1321 QETTRVLTEA SVQGKKDKLV GLKENVIVGR LIPAGTGGAT QQMRHIATQR DNVVIAARRE
1381 EAEAAAALAA PIMDADIVDD DFDTLVDTPE SRD
SEQDB ID: 3101377GAW
Reference:
3101377
Name: DNA-directed RNA polymerase, Subunit: beta, Class: EC2.7.7.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoB
Sequence:
1 MAQTFLGQKR LRKYYGKIRE VLEMPNLIEV QKSSYDLFLN SGDAPQPLDG EGIMGVFQSV
61 FPIKDFNETS VLEFVKYELE KPKYDVEECM QRDMTYSAPL KVTLRLIVFD VDEDTGAKSV
121 KDIKEQDVFM GDMPLMTPNG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAC
181 RIIPYRGSWL DFEFDAKDIV FARIDRRRKL PVTTLLYALG LDQEGIMDAY FKTVSYRLEK
241 KRGWVTPFFP ERVRGTRPTY DLIDAASGEV IAEAGKKVTP RAVKKLIEEG SVTDLLVPFD
301 HIVGKFAAKD IINEETGAIY VEAGDELTLE YDKDGDLIGG TVKELIDNGV TNIPVLDIDN
361 INVGPYIRNT MAQDKNMNRE TALMDIYRVM RPGEPPTVEA ASALFDTLFF DSERYDLSAV
421 GRVKMNMRLD LDAADTQRTL RREDIIACIK ALVELRDGKG DIDDIDHLGN RRVRSVGELM
481 ENQYRVGLLR MERAIKERMS SVEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQTNP
541 LSEVTHKRRL SALGPGGLTR ERAGFEVRDV HPTHYGRMCP IETPEGPNIG LINSLATFAR
601 VNKYGFIETP YRVVKGGQVT DEVHYMSATE EMRHTVAQAN ATLDENGKFV NELVNTRQAG
661 DYTLAPMESV DLIDVSPKQL VSVAASLIPF LENDDANRAL MGSNMQRQAV PLLRAEAPLV
721 GTGIEEKVAI DSGAAIQAKR AGIIDQIDAQ RIVIRATEDL ELGDAGVDIY RMRKFQRSNQ
781 NTCINQRPLV KVGQQVSKGE VIADGPSTDM GELALGKNVV VAFMPWNGYN YEDSILISER
841 IARDDVFTSI HIEEFEVAAR DTKLGPEEIT RDIPNVGEEA LRNLDEAGIV YIGAEVQPGD
901 ILVGKITPKG ESPMTPEEKL LRAIFGEKAS DVRDTSLRVK PGDYGTVVEV RVFNRHGVDK
961 DERALQIERE EVERLARDRD DELAILDRNI YARLKSLILG KTAVKGPKGI KPGSEITEEL
1021 LETLTRGQWW MLALEGEQDA QIVEALNEQY ELQKRALDAR FEDKVEKVRR GDDLPPGVMK
1081 MVKVFIAVKR KLQPGDKMAG RHGNKGVISK VVPMEDMPFL ADGTPVDFCL NPLGVPSRMN
1141 VGQILETHMG WAARGLGLNV DEALQEYRRS GDLTPVRDAM KHAYGEDVYA EGISGMDEDT
1201 LVEAAGNVTR GVPIATPVFD GAKEADVNDA LTRAGFDTSG QSVLFDGRTG EQFARPVTVG
1261 IKYLLKLHHL VDDKIHARST GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ
1321 EMLTVKSDDV AGRTKVYESI VKGEDNFEAG IPESFNVLVK EVRGLGLNME LLDAEVEE
SEQDB ID: 3101377GAX
Reference:
3101377
Name: ribosomal protein L7/L12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplL
Sequence:
1 MADLKALAES IVGLTLLEAQ ELKNILKDEY GIEPAAGGAV MVAAAGGDAG AAAEEEKTEF
61 DVVLKNAGAS KINVIKEVRG ITGLGLKEAK DLVEAGGKIK EGVAKAEAEE IKAKLEAAGA
121 EVELA
SEQDB ID: 3101377GAY
Reference:
3101377
Name: ribosomal protein L10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplJ
Sequence:
1 MFTIPNLERT VDRAQKEKVV EELGQIFESS GVVVVAHYAG LTVAEMQDLR ARAREAGGSV
61 RVAKNRLAKI ALEGKPCASM ADLLTGMTVL TYSEDPVAAA KVAEGFAKDN KKFEILGGAM
121 GENALDRAGV EAVSKMPSRE ELIAQIVSCI GAPASNIAGA IGAPASNIAG ILSTIIEKAE
181 AA
SEQDB ID: 3101377GB
Reference:
3101377
Name: TROVE domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNSAISVIY AQKQHTRLIS CFSRRFPNPM SQSPRTKEDE REMANKSVFA SIKGRLLPKA
61 TTRNAEGAPA YAYSDAHALA QVAVTGTFGG MFYTDPRDEL EYVVDLAEAV EPCFLAQAAI
121 YARQSGYMKD MPAVLLAVLA RRDPALFRRV FGRVVDNGKM LRTFVQVMRS GQTGRKSLGS
181 APKAMVQNWL NTASDRALLA ANIGNDPSLA DVIRMVHPKP ETKEREALFA WIVGRPCNLA
241 LLPQALQDWL AFKAGAKGPV PDVPFQMLTQ LDLTPQHWAR IARKGSWQMV RQNLNTFQRH
301 GVFNVAKNVA HVAALLRDPE AIGKARAFPY QLMVAAQNLS ADMPREIVEA LHDAMEIAVR
361 NVPKIDGQVV VCPDVSGSMT CAVTGYRPGA TSVVRHVDVA ALVAAAFSRV NRGCQVLPFD
421 FEVRDVRLEP RDTILTNAER LAALGGGGTT CSAPLKWLND RGRSPDLVVF VSDNQSWVDA
481 RAGGQGTAML AEWEKVKRRN PKARLVCIDI APYGTSQVQT REDVLNIGGF SDAVFDQIAG
541 FAAGRTGPDH WVGEIEKIEL
SEQDB ID: 3101377GBA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVPWQVGAI LNEPLADTLR FAAWYLEAGA EAVTLLFDNP QDPAIAILDG HPRVTCVPCT
61 PEFWADLGLT PETRFTKRQN VALTWVYRQQ AEGWLLNVDA DEFMWAPGDG IGAFLAAQPV
121 EAEAIRVETA EIVAVHDGAA GPVYRLPMER DAARRVYGES AALFGPRRKG LIGHPQGKSF
181 IRCGLKDVAL RQHWAQRQGG AEMAETFVPV RGGRAALLHH IGLDYDIWRA KLDWRLVSSG
241 FTVPLTERIR ALMDEPDAES RLRALHSDLH AVERARLDRL RAEGACLEPP VDVDGVAARV
301 FGATFAVT
SEQDB ID: 3101377GBB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQRKRRRPMT EASGFSLLTF VLQPAHCVVL RDWMEFFDQP PDRLVVHVGQ NPAIADQLRS
61 LASEFGAELV IAGQTDPAQT TENETGLLWQ QFDLIGDDLA CIVRLDTLPY RESNLPWQAE
121 AMEAMARHGA AFLTGSTLPF RADTTLPETG LMQTQRFSNC FAILPAPVWR KAQQAQQSGA
181 DAFGRFGSEA AVELYCAESG AFGLRLPNSP ELRIFHCQEW GPRMAEVRAA FHAGRGIAPF
241 LRGYQDDFMG ARARFYMERR PPLSRRVRIL LGRWKRNLLG QTG
SEQDB ID: 3101377GBC
Reference:
3101377
Name: ribosomal protein L1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplA
Sequence:
1 MAKLGKRTRA AREAFAGKEE LSVEQAVALI KSAASAKFDE TVEIAMNLGV DPRHADQMVR
61 GVVGLPNGTG KTVRVAVFAR GPKAEEAQAA GADIVGAEDL METIQSGKIE FDRCIATPDM
121 MPVVGRLGKI LGPRNLMPNP KVGTVTMDVA QAVQNAKGGE VQFKVEKAGV IHAGVGKVSF
181 DEAKLVENVR AFVDAVAKAK PAGAKGTYLK KIALSSTMGP GVSVDVASAS GN
SEQDB ID: 3101377GBD
Reference:
3101377
Name: ribosomal protein L11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplK
Sequence:
1 MAKKLIGTLK LQVPAGKANP SPPVGPALGQ RGINIMEFCK AFNAKTADME VGAPCPTVIS
61 YYQDKSFTMD IKTPPASYFL KKAAKIQSGA NKPSRETAGT VTVAQIREIA EAKMKDLNAN
121 DIDGAMQIIL GSARSMGIEV K
SEQDB ID: 3101377GBE
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIYSWNALY LGNAGDIDSY EGDLYAEGAS NILGSYGSPG DPLYDHIVDV VVNDADDDTD
61 INSDNYDFWS PDAMTVDGVA HTLDSGVVYN ATLTYADGST ANITAVVIQT TDGDLYLAPE
121 MTANDDWVAM EAKAIVSVSL DSVSVDTTYI AANRQQTNFI CFAAGTRIAT PKGARPVETL
181 AVGDLVQTLD HGPQPIRWIG TRRVGLATQL LSHGVAPVVI PAHSFAPSIP THPLLLSQQH
241 RVLLRSRIAR RMYGSDEILI AARRLTGLHG IALRPATGPV RYIHFALDRH EIVFANGLPA
301 ETLLLGAEVE RVLGTDVFTQ IEQSQNRGAI ALAMRPARPI VEGRRARSFV ERLRNRACRH
361 ALANPIKVPQ NRVTGLISLV SPPG
SEQDB ID: 3101377GBF
Reference:
3101377
Name: transcription termination/antitermination factor, Isotype: NusG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nusG
Sequence:
1 MAKRWYSVSV LSNFEKKVAE QIRASVAENG LEDQIDEVLV PTEEVIEVRR GKKVSTERRF
61 MPGYVLVHME MSDQGYHLIN TINRVTGFLG PQGRPMPMRD AEVNQILNRV QEGEEAPRTL
121 ISFEIGERVK VNDGPFEGFD GMVEGVDDDS QKLRVSVSIF GRETPVELDF TQVAKQG
SEQDB ID: 3101377GBG
Reference:
3101377
Name: pre-protein translocase, Subunit: SecE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secE
Sequence:
1 MPIVRKQREV RHMATINPIQ FIQQVRAEVS KVVWPTRREV LLTTVMVFIM AALTAIFFAL
61 VDLSIRGGLQ LLFGMFN
SEQDB ID: 3101377GBH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIYENGSRP TRKANSDWFT GTVWQDPVIE APAPARVRAL RVGFEPGART AWHTHPLGQT
61 LYVLSGTGLV GLRDTAPRVI RAGDTVWIPP GEEHWHGAGP ETGMVHLAIQ EAEDGQVANW
121 LEKVGDSDYL TPPQSAANRP
SEQDB ID: 3101377GBJ
Reference:
3101377
Name: cytochrome oxidase maturation protein, Isotype: cbb3-type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoS
Sequence:
1 MEVLAILIPI SLILGAVGLL AFVYTVRSDQ YDDPEGDARR ILSGDWDDKP KP
SEQDB ID: 3101377GBK
Reference:
3101377
Name: Cu-translocating P-type ATPase, Class: EC3.6.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAQLRPSPA ACPACVAVPA QPARPVPEDV QIALSLPGIH CSACISTVER ALQAHPGVED
61 ARVNLTLKRA LIKAAPELRA ADLIPVLERA GYEAHELDPG TLNATRTDRA GRDLLMRLAV
121 AGFASMNVML LSVSVWSGAS DATRDMFHWI SAAIAMPAIA FSGQPFFVRA WGALKARRLN
181 MDVPIVLAIV LALVTSLWET SLSGEHAYFD AALTLTFFLL AGRYLDYRTR AVARSAAEEL
241 AALEVPRAIR LQDGVETEVA VAQLAVGDLI LVRPGGRMPV DGEIVEGRSE LDRSLLTGET
301 LPVFAEPGLV VSAGEVNLTG PLVIRANAVG QDTSLHRMAD LVAIAESGRS RYTSLADSAA
361 KLYAPGVHIL SALSFVGWYL YSWDVRTALN IAAAVLIITC PCALGLAVPA VTTAASGRLF
421 KRGMLIKHAT ALERLAEVDT VVFDKTGTLT AGTPELTNLG DHRRADMEIA LALAEASSHP
481 LSVAITRAAR AAGLHPARID DVTEVPGFGT EGAWQGQRVR LGRAAWVGAE QAAQTSAWLA
541 VGDRAPVAFL FSDALRPGAE ETVAGLKAAG KEVLLISGDT TGAVESLARR LGIESWMAEA
601 LPQDKADRVQ ALADAGKRVL MVGDGLNDTA ALAAAHVSIS PASALDAARV ASDIVLLGND
661 LSPIAGACDT AIRATKRIRE NFRIATVYNV IAVPLAVAGL CSPLIAALAM STSSITVSLN
721 ALRLR
SEQDB ID: 3101377GBL
Reference:
3101377
Name: fixH protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAERTFTGKH AAMVFVGAFG IIIGVNILLA YSAIKTFPGL EVKNSYVASQ EFDTRRDAQE
61 ALGWHVRADA TGGLVVLSIT DRAGKPVEVS ELKAVLGRAT HVQEDFAPDF AFDGTAYVAK
121 AELGDGNWNI RMVARAEDGT EFVQRVVLHV KG
SEQDB ID: 3101377GBM
Reference:
3101377
Name: Fe-S-binding protein, Isotype: RdxA/RdxB/FixG-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSESTPEPSL YAAREPIFPR RVSGTFRNLK WVIMAVTLGI YYLTPWIRWD RGPSLPDQAV
61 LLDMANRRFY FFWIEIWPHE FYFVAGLLIM AGLGLFLFTS ALGRVWCGYA CPQTVWTDLF
121 ILVERWIEGD RNARLRLHRQ EKLDFRKARL RITKWAAWLL IGLATGGAWI FYFADAPTLL
181 SDLVTGNAHP IAYTTMAVLT FTTFFFGGFA REQICIYACP WPRIQAAMMD EDTLVVGYRE
241 WRGEPRGKGK RTEDSELGDC IDCMACVNVC PVGIDIRDGQ QLECITCALC IDACDDMMEK
301 IGKPRGLIDY MALKDEEAER AGHPPKNIWK HILRPRTIMY TSLWSLVGFG LLFALFIRSD
361 IDLTVAPVRN PTFVTLSDGS IRNTYDVRLR NKHGEERPFQ LSVVGDPSMR IELEGLPDEN
421 VSVPADTAFL QRVYIVTPKD AAPSQAASTD VRIWVEDQSN GERAYKDTTF NGRGN
SEQDB ID: 3101377GBN
Reference:
3101377
Name: cytochrome c oxidase, Isotype: III, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoP-1
Sequence:
1 MSKKPVQKQE VETTGHSWDG IEEYNNPLPR WWLWTFYLCI IWAIGYTIAY PAWPMINSAT
61 AGVMGWSTRA NVAADIAAVD EANAPINAKL ESVELTAIAA DADLNSYAVS AGSAVFKTWC
121 AQCHGSGAAG AVGYPNLLDD DWLWGGSIED IHQTVTAGIR NTENDDARYS EMPAFGRDEL
181 LEAAEIDQVV NYVMSLSGEP QDAAQVAAGA VVFADNCSSC HAEDATGDRT QGAPNLADAI
241 WLFGGDYAAI SDSVNNARFG VMPAWDSRLT EAQIRAVSAY VHQLGGGE
SEQDB ID: 3101377GBP
Reference:
3101377
Name: cytochrome c oxidase, Isotype: IV, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoQ-1
Sequence:
1 MEEYTLLRQF ADSWMLLALF AFFIGVVIWV FRPGSTRTYD DTANIPFRHA DAPAPVQGDA
61 AAPLRGDDKP ATFKEARQ
SEQDB ID: 3101377GBQ
Reference:
3101377
Name: cytochrome c oxidase, Isotype: II, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoO-1
Sequence:
1 MAILDKHKIL ETNATLLLIF SFLVVTIGGI VQIAPLFWLE NTIEKVEGMR PYTPLEMAGR
61 EVYIREGCYV CHSQMIRPMR DEVERYGHYS LAAESMYDHP FQWGSKRTGP DLARVGGRYS
121 DDWHVDHMRD PQSVVPESVM PKYGYLERTM IDGKYIGDLM AANAIVGVPY TDEMIEAAQA
181 DFAAQADPDS DYDGLLERYG DKVNVRNFDG QPGVSEADAL IAYLQMLGTL VDFSTFTPDA
241 SR
SEQDB ID: 3101377GBR
Reference:
3101377
Name: cytochrome c oxidase, Isotype: I, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoN-1
Sequence:
1 MSNYIKLIAL GLIALFAAMG INYARDVAYM VHAVIVLLVS GGLFIWTLRK TDEARGLLDL
61 SGEYMDDVVR YGVIATAFWG VVGFLAGTFI AFQLAFPGLN FEWAQGYANF GRLRPLHTSA
121 VIFAFGGNAL IATSFYVVQR TSAARLWGGN LAWFVFWGYQ LFIVLAATGY LLGGTQSKEY
181 AEPEWYVDLW LTVVWVAYLA VFLGTIIKRK EPHIYVANWF YLSFIVTVAM LHVVNNLTIP
241 VSIWGSKSVI VWPGVQDAMV QWWYGHNAVG FFLTAGFLGM MYYFIPKQAE RPVFSYKLSI
301 IHFWALIFIY IWAGPHHLHY TALPDWASTL GMVFSVVLWM PSWGGMINGL MTLSGAWDKL
361 RTDPIIRMMV ISVGFYGMST FEGPMMSIRA VNSLSHYTDW TIGHVHSGAL GWNGMITFGA
421 LYFLVPVLWK RDRLYSLKLV NYHFWLATIG IVLYAASMWV TGIMEGLMWR EVDANGFLVN
481 SFADTVAAKF PMYVVRGLGG VLYLTGAIIM CYNLWMTVRK APAKEASLSV AVPAE
SEQDB ID: 3101377GBT
Reference:
3101377
Name: universal stress protein family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMAYKSLLTV LTDPKIAPAT LAQLVALAEA QDAHAEALCL GVDRSQTGYY YAGANALILQ
61 ETLNRANAEA EEVLTLAQDT LGKSGVRWSA ESGVAQIADL GRHVAHRARF SDLVVLSRPY
121 GEDRGSEAEP IVEAAMFEGH APVLVVPDNA PPLKQPRTVL LGWNESVEAM RAIRLAMPFL
181 RAADLVRIVV IDPPRHGPDR SDPGGLLSQM LARHGVKVEI DVLSKTMTRV SDILNRHATD
241 TSADMLVMGA YGHSRFREAI LGGATRNMLE QATVPVFMAH
SEQDB ID: 3101377GBU
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQFDSLLILL LVGALAGWLS GKIMAGRGFG LLGNILVGIV GAFLAGTIFP ALGFAVGGGF
61 LASVIHATIG SVILLFVIGL IRKA
SEQDB ID: 3101377GBV
Reference:
3101377
Name: Ser hydroxymethyltransferase, Class: EC2.1.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glyA-3
Sequence:
1 MPAHCETRVQ QIAETTARAD SDAIDAHLEA LIEENRTIHD AECFNLNPAT NVMNPRAEAV
61 LARGLGSRPS LGYPGDKYEM GLEAIEEIEV IAAELAAKVF NARYAEIRVG SGALANLYGF
121 MALTRPGDTI IAPPASIGGH VTHHKAGCAG LYGLKTIEAP VDADGYSLDL SALAELAERH
181 RPRLITVGGS LNLFPHPVAA VREIADRVGA KVLFDAAHQC GIIAGGAWAN PLDEGAHLMT
241 MSTYKSLGGP AGGLIVTNEA EIAERLDAIA FPGMTANFDA AKSAALAISL LDWVDHGAAY
301 AQAMVDLAQA LAAELEALGL PVFHGAGGAT ASHQFAVEAA RFGGGQAASK TLRRAGFLAC
361 GIGLPIAPVA GDMNGLRIGT PELVRRGVTP EHAAELAWLI TQGLTGNDPE AVALRTREMR
421 ARFQGMHHIR S
SEQDB ID: 3101377GBW
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVAPPRPRP LPLNALRAFE AAARLGGFAA AAEELGVSPG AVSAQIKQLE DVLGAPLFER
61 GVRGVNLTAL AVDVLPDLTG AFDRLATVSH GLRTGAKPQV VHVAALPSVA QLWLSPRLPG
121 LRAAASEIEI SVTAMEQPPD LKRAPFDLCL FFGESPGEAL AADTITPVCA PALADRLHRP
181 EDLRHLPCLI DTTWHADWSH WMATALPGQT FVPRGPEFSL YALAVEETVN GAGVLMGHEA
241 LIAPFLARGQ LVAPFATRVT LPRALRLWAP RPLPPGSAAQ RVADWLRRQS
SEQDB ID: 3101377GBX
Reference:
3101377
Name: transcriptional activator protein, Isotype: FnrL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fnrL
Sequence:
1 MSTQPQLCHT SCDDCPIRHR AVCAHCDADE LEKLEEIKYY RSFEAGQTVI WSGDQMSFVG
61 SVVSGIATLT QTMEDGRTQM VGLLLPSDFV GRPGRDGAPY DVVATTDLVM CCFRKKPFEE
121 LMARTPHIAH RLLEMTLDEL DAAREWMLVL GRKTAREKIA SLLSIIARRD ASLSMRGVSG
181 PMVFDLPLTR EAMADYLGLT LETVSRQISA LKKDGVIHLE GKRHVTIPDM GRLMEEAGDD
241 TDGGFLV
SEQDB ID: 3101377GBY
Reference:
3101377
Name: oxygen-independent coproporphyrinogen III oxidase, Class: EC1.-.-.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemN
Sequence:
1 MIAKSQLARL GLFDAKVPRY TSYPTAPHFS NDVGPDRFGD WISGIAPGSA ISLYVHVPFC
61 RRLCWFCACR TQGTQTDNPV IAYVDTLKAE LALLAERLPE GVHLSRLHWG GGTPTLLNPE
121 LMRGLARSIF DTVPLGPEAE FSVEIDPNEI DPARLDALAE AGMNRASIGV QDFDDEIQKT
181 IGRIQGYDVT RDAVEMIRAR GIYSLNADIL YGLPHQTRAR MTESVQKLLS LNPDRVALYG
241 YAHVPWMAKR QQLIPSDALP TPEQRLDLFD TARRLFMWDN YAEIGIDHFA TQEDGLTRAL
301 KTGKLRRNFQ GYTDDQAEVL IGVGASSISR FPQGYAQNAP ATSAHTAAIR AGRFSTARGH
361 LFKGQDVMRA RLIEALMCDF RIDRAEILRD HEITAEELDQ MFRNADEAFD GLLRVTADGL
421 FIPQEARALT RMVARLFDAY DLSKAGHSSA I
SEQDB ID: 3101377GC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEESKTYDP VTGEHLKDWG HRPGKQFPAL LARANEMRAA GLGLVRIRME LEVEIPPAPV
61 THDLRAPGEV PFHENIDIAG PDEEDNVQKV RETMTALMRT PTIEAGAIMP DACPAGPVGT
121 IPVGGVAAAR NAIHPGMHSA DICCSVMITD LGHADPKTVL DAAQSVTHFG PGGRPQGNRF
181 TVSLDLLDAF RANAFLSNPK ALRMAQEHLG TQGDGNHFLF VGRSRKTGRT AIVTHHGSRG
241 PGAVLYKLGM EVAERFRREL SPGTAKQNAW IPADTDEGRD YWAALQLIRK WTKANHNAIH
301 QATVEAARAE AGDRFWNEHN FVFRRGDIYL HGKGATPAWG DYAADATGLT LIPLNMSEPV
361 LVVRGKDAAR GLGFSPHGAG RNFSRSEHKR RMGKMTPEAM LKAETEGLDI RFHAGGVDAS
421 ELPSSYKKAG SVVDQIRSYD LAEIEDYIDP YGCIMAGEVP PFWAKKKTRR
SEQDB ID: 3101377GCA
Reference:
3101377
Name: translation elongation factor, Isotype: G
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRCDRIRATP DCAADDRITA RKGIASMRVF TVLGPSQSGK STLVEAISRL DSRPTTFDLS
61 ETVHLHGFSY LEEPWCAIDV DGGSDALAFA GPAMAISDAA VIVVPPDPEA AVLCAPYLRL
121 VEEARIPAFL FINRMDNPNG RIRDIVAALQ AYCSHHIALR QVPIREGDQV VGAVDLISER
181 AWKYREGEPS ALIELPAAAV EREQEARAEL LEALSDFDDH LLEQLIEDRQ PPSAEVYDLA
241 ARVSQNHQLI PAYLGAANHG NGLTRMMKAL RHEAPEFDIA AGRDAASEQA RAIAGFGDMR
301 KHMGKIVVLR GLGDGVKAHE ALGGDTVGSL LELDARSQIG ALAAGQIGLA VKSDHLRPGH
361 IYDSAGASDL PDWARSHPPG HRQLVSPAHE RDDARLSSAL ARMNEIDPGL HLGVDEGTGH
421 AVLGCQGPQH LRRIATKLAE DFGVEITSEP VATAYRETIQ KPVEHHHRHR KQSGGAGQFA
481 DVLLTVEPLP RGAGFQFDEV VKGGAVPKTY IPSVAQGAEE ALARGPEGFP VVDVKVTLKD
541 GKHHAVDSSD YAFRTAGKAA VREALPQAKP VVLQPIMRAE IHLPSMFVGD LVPAISGLQG
601 QVLGFEAHPS AAGWEIFNAL LPAVAEDELH RMLASSSRGT GWVRLSFDHY EELRGPVPKP
661 SRETAAAG
SEQDB ID: 3101377GCB
Reference:
3101377
Name: oligopeptide/2-peptide uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: yejF
Sequence:
1 MSALLEVKGL NVSFRQDGRI SQAVRGVSFT VNRGETVALV GESGSGKSVS ALSTVSLLGD
61 SAIVEGSVTY DGQEMIGASE QRLMDVRGND ISFIFQEPMT SLNPLHTIRK QMAESLALHQ
121 GLVGAAALER ILELLVKVGI RDPETRLDAY PHQLSGGQRQ RVMIAMALAN KPDILIADEP
181 TTALDVTIQA QILELLADLQ REENMGMLFI THDLGIVRRI ADRVCVMKAG EIVESGSTEE
241 IFANPRHPYT RKLLAAEPKG RPDPVPAGAE EVARTDHLRV WFPIQRGFLR RTVGHVKAVN
301 DASISVRAGE TLGIVGESGS GKTTLALAIM RLIGSEGGIT FRGEDVRSWS TRELRRLRKD
361 MQIVFQDPFG SLSPRMTCAQ IISEGLAIHK VDPHRAPREL VAEVMQEVGL DPATMDRYPH
421 EFSGGQRQRI AIARAMVLRP RLLVLDEPTS ALDMTVQVQI VALLRDLQRK YGLAYLFISH
481 DLKVVRAMSH KVIVMRQGDV IEMGETEALF TNAQTDYTRS LIAAAG
SEQDB ID: 3101377GCC
Reference:
3101377
Name: oligopeptide/2-peptide uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: yejE
Sequence:
1 MRLSPLNQRR WNNFRRNRRA FWSLILFSIL FGVSLFAEFL ANDKPILVSY RGELRMPIFS
61 FYPETAFGGD FRTEAIYRDP EVKCLIASGG VEDCFDDPEG VIEQIEAGTY QADGFEQGWA
121 IWPPIPYSYR TSVDRPGAAP LPPNEQNLLG TDDTKRDVLA RVIYGFRLSI LFALIVTFAA
181 SIIGVIAGAI QGFFGGRTDL IMQRVIEIWG ATPGLYVIII MFSIFQRSFW MLVIISILFG
241 WTALVGVVRA EFLRARNLEY VRAARALGVS DWTIMFRHML PNAMVATVTI LPFLVTGSIG
301 GLASLDFLGF GLPSSAPSLG ELTLQAKQNL QAPWLAFTAF FTFAIMLSLL VFIFEGVRDA
361 FDPRKTFS
SEQDB ID: 3101377GCD
Reference:
3101377
Name: oligopeptide/2-peptide uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: yejB
Sequence:
1 MGAYILRRLL LVIPTLLGIM LVNFVLVQFV PGGPVDQAIA QLQGGGDVFE SFAGQGNDAQ
61 LNSQTNAVND SYIGARGLPP EFIKELEELY GLDKPAHERF LMMLWNYMTL DFGESYFRKI
121 DVVDLVLEKM PVSITLGLWS TLIAYAISIP LGIRKAVRDG SRFDTWTSGL IIAAYAIPGF
181 LFAILLLVLF AGGSYWQIFP LRGLTSDNFS DLSLLGKVLD YFWHIALPLT AYTIGAFTTL
241 TLLTKNSFLD EIKKQYVITA RAKGLSESRV LYGHVFRNAM LIVISGFPGV FLSVFLGGSL
301 IIETIFSLDG LGRLGFEATV ARDYPVMFGT LFVFGLIGLL VGILSDLTYV LVDPRIDFER
361 REG
SEQDB ID: 3101377GCE
Reference:
3101377
Name: oligopeptide/2-peptide uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: yejA
Sequence:
1 MAHMPTQPGG RALTTRPRAA TRARALDIRP GVMLLFAGLL LMALAGIARA EETIIKSHGF
61 SEFGDLKYPE GFAHFDYVNP DAPKGGELSY AAVGTFDNLN PFTRKGRAAA RSADQYESLL
121 FPSYDEPASY YGLVAESLEY PESQDWVIFN IRPEARFSDG TPITAEDVVF SHELLLEQGL
181 KSYAEAVRKR IPKAEALDSH RVKFHFAPDI PRRALITQVG GTPIFSKAWF MADPEKRRLD
241 EPRLEQGIGS APYVLDSFDI NRRITYRRNP DYWGADLNVN VGRNNYDSIR VEYYTDTIAA
301 MEGFKAGNYT LRQENNSKSW ATAYDFPAIE KGHVIKAELR DGDVPSASGF VINMDRPQFQ
361 DIRVRAAVQL AFNFEWTNES LQYGLFQQRH SFWQGTPLEA TGLPEGRERE VLEALGDALD
421 PAVLSEEPVS AHTSSPDRQN DRKNLRRAMK LLDEAGWAVD GDGIRRNGAG ETLRIEFLSD
481 EPTLDRIIQP FVDNLKVMGI DARYNRVDDA QFTLRRRDRD FDMIMGGYPM SLQPSTGLYQ
541 QFGSEAAAYS LFNPSGVHGP DIEPLIDGVV AASTTEELQA NVRALDRVLR AKRIMVPTWY
601 LGKYWVAYWD KYSYPENLPP YALGLEDLWW VDADRAAALK SSGALR
SEQDB ID: 3101377GCF
Reference:
3101377
Name: cytochrome c552
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycM
Sequence:
1 MFDTMTVTKA AAGLFGAFLA LLLAKWAAET VYHVGGHGDE PAYAIEVAEA EEASGTEETV
61 SFEELMASAD AAKGEKVFKK CAACHKVNGE DATGPHLDGV VGRAVASVAG FGYSGAMQGH
121 GGDWTPEALD EFLTKPSAAV PGTSMSFSGL KKQGDRVDLI AYLQSVSN
SEQDB ID: 3101377GCG
Reference:
3101377
Name: prephenate dehydratase, Class: EC4.2.1.51
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLHGNDPMTH RIAFQGEPGA YSHEACRNAR PDMEALPCRT FEDVIEAVRR GEAELAMLPV
61 ENTTYGRVAD IHRLLPHSGL HIIDEAFVRV HINLLGVPGA TLDDIRDAYS HLVLLPQCAG
121 FLKQHGITGR VSPDNARAAR EVAERGDKSH AALASELAGE IYGLNVLARH IEDTDNNTTR
181 FLVMSRETDD SRRGDFGMIT SFVFEVRSIP AALYKALGGF ATNGVNMTKL ESYMLDGSFS
241 ATQFYADIVG HPEDANVRLA MDELNHFTTN VEILGVYPAA QPRG
SEQDB ID: 3101377GCH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPAQRAQRL SISLANSAIR SLNRRVMFLR ASFSDCRNRR ADSVFAFNST EKLILVRRGD
61 SASNSITTSP LMPLL
SEQDB ID: 3101377GCJ
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTAEQVTFG GSGLDRAAHL RGDGEAQKRM SADPRARCLL LWRGKLLVEG ERLERLAWVG
61 PTHPLVTEGP GGEAETPIFL GLDENGAPLF AQDISAWGAE GQDLTGLGGF VDRSEQQHPD
121 LPQGQVFAEL RRIMTRLSPR DAELAATAKA VIGWHASHRF CARCGARSEI AQAGWQRGCP
181 DCGGQHFPRT DPVVIMLITH GDQVLMGRSP GWPEGMYSLL AGFVEPGETL EAAVRREVLE
241 EAGVPVGAVT YLSSQPWPFP ASLMFGCAGE ALSRNLTIDP VEIEDAIWVS RSDMMLAFAG
301 EHPRLLPARK GAIAHFLLQN WLADTLD
SEQDB ID: 3101377GCK
Reference:
3101377
Name: 2',3'-cyclic nucleotide 2'-phosphodiesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQPSKQALSS APHAQDAATL RVRLLATTDL HMQLTGYDYY SDRPEKTGGL ARLAPLIAAA
61 RAETGVDLSL LFDNGDSIQG TQMGDIAARH PSAPHPLMRA FSYLGYDALG LGNHDFNFGL
121 EVLDQVLEQA PCPVVCANAH RLDRATPWQQ EVILEREVRT GADVTLLRIG VLATLPPQTV
181 DWDAHLLSGR MRVDGIVEAA RHAVTRLRAA GCDLIIALAH SGLAEADAAP DQENAVIPLA
241 ALDGIDAVIA GHTHLRLPSQ DAAPLPHTDR ANGLVHGKPV VMPGHHGSHL GIIDLDLRQT
301 PGGRWRVARA QAVLRPAEGP ADTALMQLLA ADHAATCAAA NQPAGHADDA MHSYFTFVAP
361 DRGLAKVAAA QAAALRPFLA GTPLADLPLL SSVSPLKAGG RAGPDHYTDV PAGPLSMRHV
421 ADLHMFPNEL RALVLTGADL REWLEMAAGV FLSPAPAGAC DMLLDTSVPG HNFDSLYGLT
481 YEIDPRAPPR YDIGGRLIAD ENRRIGSLCH NGTPVDDRQK FVVALNNYRA NGGGHFLMLD
541 RGEPVPLPSL RIQSALHDYL SGRLPADPLE QAPHPWRLAP LPGQSAILRT GPRARDHLDE
601 LAGRDISDLG LDAEGFLRLR VGL
SEQDB ID: 3101377GCL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVRHPPVLR CFATSKPVSL ALPDLGWSPF FATQAAALSG AYVARAEALV PFLTVLAVNA
61 CGPTDLGPIL AWCHSDRTGA LVDSSGVCKT TLMISQTDAG EATVGIREGA RNSESVAEAR
121 APDKAFDKMV RAVRREMIGR NKR
SEQDB ID: 3101377GCM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDMQASVVV EDFHFPSGSA QLSARLYLPA GTPQVAVVIN GATGVPREYY QHFATWLAAE
61 RGIACLTYDY RDFGHSLRGP LAASTATMSD WALIDMPAAY AEMQRRYPDL PLWVIGHSVG
121 GMLGPLQPGI EPIARMICVC SGLVHHSDHP WPYQALARLF WFGHAPLLVK TLGYLPGRRI
181 GFGSDLPPGV YWEWRRWCTT PGAYLPEMGD RLPQADWSRS GAPVDMFAFE DDTTIPPNCV
241 WRLADVYGET VRRHLLHPRA FGLREIGHLG AFARRNAALW PRLIAP
SEQDB ID: 3101377GCN
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQRPLPTKD RLIRAAAQLF QRSGYHGVGL SELLAEAEAP KGSLYHHFPN GKSDLALASA
61 TWASDEMLRL IAASFEPADS FHAGMEVLCG KVAKLFDKSG QWDGCPISST LFEGPDNAAF
121 RAHAHHLFEG WITEGAHHAS RFGLADPQKT AETMFILLQG GWMLARARQS SDVLRRLPEM
181 LPGAD
SEQDB ID: 3101377GCP
Reference:
3101377
Name: Zn metallopeptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLKGVRGSR NVEDRRGQRG GGGKGIGGRG LGIGGVLLLL VIGAFTGIDV TPFLTEQPQA
61 PQSAPTELSE EERQAGEFVS RVLTTTEEVW TGVFRDQLGR EYTPPTLVLF SQVTSSPCGG
121 ASGATGPFYC PADQKAYLDT DFFATLARRL QAGGDFAAAY VIAHEVAHHV QNQLGILGKV
181 DQARRRSSQV EANALTVRLE LQADCLSGVW ARSVWGLMEQ GDLEEALNAA RMIGDDRLQR
241 QAGRVPQPHT FTHGTSAQRA AWFERGFESG QVATCDTFNT NRL
SEQDB ID: 3101377GCQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGPRHPVPP RGGRRMIWTT QTHEFAATLC RRTGRPCPAL SGLAENLTRA LRRAEPMTDA
61 SFEIEGHCEM PPCGAGCLAR YAASHSRVRV FCGVDEDTAL PHLHRFADAL LGSEGGGFAA
121 GSGPVPCAMV EARAHAAQVS APVQPTA
SEQDB ID: 3101377GCR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQLVLYALK VGGGTLAICQ LPGISGDYAG DVDLIGSWAP GLVISMTTEV EMLQHGARNF
61 GADVQSRGCR WAHLPVEDFG TPGREAQAKW SAISASARHA LRGGGRVLIH CKGGCGRSGM
121 AALRLMIETG EAPKAALAHL RSVRSCAVET DAQMDWALAG RAIRE
SEQDB ID: 3101377GCT
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFQGWNRIGP QMAGAFPSLE IDADAYRGIR ICSVVSLPVG GNAVRDDDTS ASGAGDDANS
61 DNFGSNLING QQGDDFIVAV DDRSDLGKVD TVKGGVGRDT LVVDEGDLVT TRGGADQDIL
121 ETYSGVADGY DVVTITDFDT ARDVLTLQGE ASLLRPGNGD ETPVSVQELD DQTGTMVLIN
181 GIRVAHLIGA QGVSPDQIRV YIDNR
SEQDB ID: 3101377GCU
Reference:
3101377
Name: DNA polymerase III, Subunit: gamma/tau, Class: EC2.7.7.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaX
Sequence:
1 MSDAPSTPYQ VLARKYRPET FADLVGQDAM VRTLKNAFAA DRIAQAFIMT GIRGTGKTTT
61 ARIIAKGMNC IGPDGNGGPT TEPCGKCEHC VAIMEGRHVD VMEMDAASRT GVNDIREIID
121 SVRYRAASAR YKIYIIDEVH MLSTSAFNAL LKTLEEPPAH VKFIFATTEI RKVPVTVLSR
181 CQRFDLRRIE PEDMIALMRR IADAEGAQIA EDALALIVRA AEGSARDATS LLDQAISHGA
241 GETSAEQVRA MLGLADRGRV LDLMDMILRG DAGAALTELG AQYAEGADPM AVLRDLAEIT
301 HWVSVVKITP DAAEDPTVSP DERARGQQMA DALAMRVLTR MWQMLLKALE EVAAAPNAMM
361 AAEMAVIRLT HVADLPSPEE LIKRLQDAPP PPNPGGGPRV GQGASAPAQN GVSASYAPAP
421 RGGGGGPVAA LAQDPQTALA RFPTFEHLVE LIRANRDGKL LADIEMDLRL VSYQPGRIEF
481 QPTERAPTDL AQRLGSALQR WTGNRWAVSV VAQGGGKTID EIRNAEKYAL EEKAREHPLV
541 QAVLAQFPKA RITHIETPEQ RAAKVVTEAL PEVEDEWDPF EDG
SEQDB ID: 3101377GCV
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPVAPYRIA PDSPQIGAIL ALIRDSFAFM DGRIDPPSSM HRLTEQAVAA QAAAGEVWAL
61 GAPPVAVVFL TVKPGRLYLG KLAVDASMRG QGLARRLVAQ AETRARILGL PVVELETRVE
121 LVENHATFAR LGFAKTGETA HPGYDRPTSI TMQKRLF
SEQDB ID: 3101377GCW
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAMADVTIRG AGIFGLSIAW ACVLRGARVQ VVDPFGPGAG SSGGLVGALA PHVPENWNAK
61 KAFQFDSLIM AEGFWAGVEA AGGVSPGYGR TGRIQPLADE RAVDLADERA ENARTLWQGQ
121 AEWRVCPVDE MGSWCPPSPT GLVVHDTLSA RMHPRRACAA LVGALAVRGV EVLAEAPDRG
181 QVIHATGIAG LEELNRARGR LVGTGVKGQA ALLRFDAGRQ APQLFADTVH IVPHADGTLA
241 IGSTSERDYD DPTSTDAALD TVLDRAMQAV PLLHGAEVIE RWAGVRPRSR SRAPMLGAHP
301 LYPDQFIANG GFKIGFGMAP KVAHVMAELV LEGQDNIPQD FRPEASL
SEQDB ID: 3101377GCX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVDQQAKLSW TEDRIPVSDR FDDPYFSLEN GLAETRHVFL AGNGLPGRFT PGFHIAELGF
61 GTGLNMLTAW AAWEGAGIET PLRFTSFEAY PMAPADMARA LAAFPELGPW AERFLSAWAG
121 TPCDLGTLQL DVVQGDARQT LPEWTGRADA WFLDGFSPAK NPELWQEDLL AHVANRTAPG
181 GTVATYTAAG FVRRGLEAAG FTVTRLPGYG RKRHMTQGVL R
SEQDB ID: 3101377GCY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQGTARAQQ NNIPVGIALM LAATVVFALQ DGISRHLASS YNTYMVVMIR YWFFAAFVIA
61 LAARSRGGLR AATRTAQPGL QIFRGLLLAS EICVAVFAFT VLGLIESMAV FICYPLLVAA
121 LSGPVLGEKV GWRRWAAIGV GLVGVLIILQ PGMGVFNPWA VVPLISALMF ALYGLLTRYA
181 ARQDSTATSF FWTGVTGAVA MTAVGLWFWE PMSAPDWRWM ALLCVSGALG HWLLIKCYEM
241 AEASAVQPFA YFHLMWTAIL GITVFGETLR SAVIIGAALI VAAGLFTLWR ERAQSRSR
SEQDB ID: 3101377GD
Reference:
3101377
Name: DNA-binding response regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRILLADDHA LVRDTISVYL QSEGDAEVVA VPDLGAAMRA ADTEGPFDLI LLDFNMPGMN
61 GLDGLRAAIR HAPDTPVALL SGSAPNRVAQ EAVDAGAAGF VPKTLAAKSL LHAVRFMIAG
121 EVFVPSTVLQ APEAPSDGGL TATLSRREKQ VLGGLCRGLP NKEIARELDL QEVTIKLHVR
181 TLCKKLNAKN RTQAAMIARD AGFE
SEQDB ID: 3101377GDA
Reference:
3101377
Name: transglycosylase, Isotype: slt family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRQEMQGMS RVLIASLAAI FWCFAAIGPV WADAAANLRA ALREMRAENW TEALRVAGAR
61 GSVSRDIIVW HWLRKSYGTD GDALVFLNRR GDWPGLDYLR RQSEPQFTLS PPERVLEFYS
121 GAPPQTAEGV LNYAVALLAT GQRGDAEAEL VKAWRTLPMG AGLQRDYVEN YGKLLAPHHV
181 ARLDRMLWEG YTISAKQMLS LVDEGQRKLA QARIGLQDRV PGIDALIAAV PVALAQSPGL
241 AHDRFVWRDR KELDDSAIDL MLERSTSADA LGEPDKWGQA RARLTRLTMR QDRNDRAYQM
301 AARHFMTPGM GYAYADLEWL AGYLALAKLD DPAAAVAHFQ RFDAAVNSPI SKGRAGYWLG
361 RAYAALGDAD KAHAAYAMGA EHQTSFYGLL AAERIGRPFD PTLANPPATP PWREAAFMSS
421 SVLEAGLLLL RAGELDLAER FLTHLAESLD PVQATQLAEM ALEMQEPHLS VMIAKRKAQE
481 GVVLTGAYYP LHPVGRLNLP MAPEMTLAIA RRESEFDPVV ISGAGARGLM QVMPATARLV
541 ADALGILGGH STDSLTADWE YNAKLGANYL AELAGEFDGN VVMMAAGYNA GPNRPISWME
601 RFGDPRSGTP DIVDWIEHIP FEETRNYIMR VTESLPVYRA RLGKEPLPLP FSAELAGSTL
661 RAFAPQGE
SEQDB ID: 3101377GDB
Reference:
3101377
Name: dihydrodipicolinate synthase, Class: EC4.2.1.52
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dapA
Sequence:
1 MFKGSMPALV TPFRNGELDL EALKRLVEWQ IGEGSTGLVP VGTTGESPTL SHEEHETVVA
61 EVVKAAAGRV PVIAGAGSNN TTEAIRFVQF AQRIGADAAL VVTPYYNRPT QRGLIAHFTA
121 LHDCAEIPIV IYNIPGRSVV DMTPATMGAL AKLPRIVGVK DATGDLARVS QQRASCGADF
181 IQLSGEDATA LGFNAHGGVG CISVTANVAP RLCAEFQQAT LAGDYAKALD YQDRLMPLHE
241 AIFIEPGLVG AKYALSKLGL CSEEVRSPLT GLEDSTKAAI DAAMKHAGLL
SEQDB ID: 3101377GDC
Reference:
3101377
Name: dimethyl sulfoxide reductase, Subunit: C
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPAPSVILF TTLSGLGFGL LFFLGLGLPS VSGWVAFVFF VIAYAMAVGG LLASTFHLGH
61 PERAWKAFSQ WRTSWLSREG CAAVAALLVM GLYALGLVFL DQRWSLLGGL GALLSLGTVF
121 TTSMIYAQLR TVPRWHSPLT PVLFLAFSLA GGALLAGQVR LALILLVSAA LVQLVWWRQG
181 DGALARSGTD LASATGLGQG GVVRAFEPPH TGSNYLLREF VHVVGRKHAA KLRVIALVLA
241 FVLPVLLLLL PFGHALALLA VLSHLAGVAV SRWLFFAQAE HVVGLYYGKR
SEQDB ID: 3101377GDD
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRKFVEFSC VCPWLLERDM TELPQKTDRK LGLVIDLDTC VGCHACVISC KGWNTENYGA
61 PLSDQDPYGA DPSGTFLNRV HSYEVQPPEG HAQLVHFPKS CLHCEDAPCV TVCPTGASYK
121 RSEDGIVLVN ESDCIGCGLC AWACPYGARE LDLAEGVMKK CTLCVDRIYN ENLPEEDRVP
181 SCVRTCPAGA RHFGDLGDPD SAVSHLVAER GGMDLMPEMG TRPVNKYLPP RPKDQIEAQI
241 DILAPLLAPV ADEPKGFMAW LDKALEKL
SEQDB ID: 3101377GDE
Reference:
3101377
Name: molybdopterin-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHHQPKIET SPHVSDEVRK TTCYMCACRC GINVHMKDGP DGKKRVAYIE GNREHPVNKG
61 VLCAKGSAGI MQVNAPSRLR APLKRVGPRG SGEFQEITWD EALEIATGWL KPIRENDPSK
121 LAFFTGRDQS QSFTSFWAQN FGTPNYAAHG GFCSVNMAAA GIYTMGGAFW EFGQPDWDHT
181 KLFILLGVAE DHDSNPIKMG IGKIKARGAR VVGVNPIRTG YNAVADDWYG ITPGTDGLLI
241 LSLIHVLMKA GKVDLDYLAR YTNAPCLVID NPGGADHGLL LRDADDKVLV IDRASGELTP
301 FDRPGVRPDL SGSTEVNGRI CRTVMQAMAE RYLSAEYAPE AVAERCGIPA PRIRALAAEI
361 ARVAFDEAFE IDQEWTDFRG ETHNVMTGRP VSFHSMRGVS AHANGFQTCR ALHLLQILLG
421 TVEVPGGFRF KPPYPKPVEA HPKPHCKATP GAPLDGPHLG FVRGPEDLAL KPDGSPARID
481 KAFTWENPMS SHGLMHMVIS NAHAGDPYKI DTLFMYMANM SWNSSMNTRG VMDMLTDKDE
541 SGEYVIPRII YSDAYSSEMV AYADLILPDT TYLERHDCIS LLDRPICEAD AAADAIRWPV
601 IEPDRDVRGF QTVLVQLANK LQLPGFTDES GAAKYTDYAD YIVNHQRKPG IGPLAGFRGE
661 AGDKAGRGEV NPDQLDRYIE NGGFFVEHVP DGAQYYKPWN TAYQDWAVGM GLYDSPQPYL
721 FQLYSEPMRR FQLAAEGHGE RQPPDHLRAR IGARLDPLPI WYETDQQGNE GFTVNALTQR
781 PMAMYHSWGT QNAWLRQLHG RNPLYVPTKI MREQGMKDGD WARLTSPHGE IVVPVMEMAA
841 LNENTVWTWN AIGKRKGAWA LEPDAPEATK GFLLNHLIHE LLPPKGDGLR WANSDPVTGQ
901 AAWFDLKVKI ERVAGPEERA ESQPEFPALK SPVGTGPKEL TWKVGK
SEQDB ID: 3101377GDF
Reference:
3101377
Name: phosphate acetyltransferase, Class: EC2.3.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pta
Sequence:
1 MMTQTPIDLL LSDPPARRAT VALSEGSDPR VVAGALAAHS AGIADVILVG QAAEIRAALK
61 AQGAPADSLT IHDPDSSPLT AEFAAAYYGL RRHKGVSEAA ALAAVRTPLV YAAMLVRGDH
121 AVGTVGGAVA TTSDVVRTAI QVIGAAPGAA MVSSFFLMYP PEAATAHARA MLYSDSGLVI
181 DPSVAELAAI AAASAASCRA LLRAEPKIAM LSFSTKGSAR HPHVSKVTDA LARLRADHPD
241 LDADGELQFD AAFVPSVGAS KAPGSDVAGQ ANVMIFPNLD AGNIGYKITQ RLGGYTAIGP
301 VLQGLAKPAN DLSRGCVAGD VTQMIAVTVL QAMAQTQ
SEQDB ID: 3101377GDG
Reference:
3101377
Name: sulfoacetaldehyde acetyltransferase, Class: EC2.3.3.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xsc
Sequence:
1 MECVLMKMTT EEAFVKTLQM HGIQHAFGII GSAMMPISDI FPAAGITFWD CAHEGSGGFM
61 ADGYTRATGK MSMMIAQNGP GITNFVTAVK TAYWNHTPLL LVTPQAANKT IGQGGFQEME
121 QMRMFADCVA YQEEVRDPSR VAEVLNRVIM NAKRASAPAQ INIPRDMWTQ VIDIALPAIV
181 EFERPSGGEE AVAAAAEMLS NAKNPVILNG AGVVLSKGGI AASKALAERL DAPVCVGYQH
241 NDAFPGSHPL FAGPLGYNGS KAGMELIKTA DVVLCLGTRL NPFSTLPGYG MEYWPADAKI
301 IQVDINPDRI GLTKKVSVGI IGDAAKVARG ILAQLSDTAG DEGRAARKDR IAQTKSAWAQ
361 QLSSMTHEDD DPGTTWNERA RADKPDWMSP RMAWRAIQAA LPREAIISSD IGNNCAIGNA
421 YPDFDEGRKY LAPGLFGPCG YGLPAVVGAK IGCPDVPVVG FSGDGAFGIA VNELTAIGRG
481 EWPAVTQIVF RNYQWGAEKR NSTLWFDDNF VGTELDQRVS YAGIAKACGL QGVVARTMDE
541 LTAALAKAIE DQKAGKTTLI EAMINQELGE PFRRDAMKKP VRVAGIDKAD MREQQV
SEQDB ID: 3101377GDH
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tauR
Sequence:
1 MAIPVETFFL KQGAQGTLQA QIQQMIAEGI LSGRFHVGEK LPSSRRLATH LGVSRITVTL
61 AYTELLANDY LTSRGRSGYF VSDNAPIPPS YAPMERDQET VDWSRAIARK FSGGDTLQKP
121 ADWRDYRYPF IYGQADPTLF DHANWRLCAV RALGQKDFAS LTADYVDQDD PLLIEFIARH
181 TLPRRGISAR PEEILITLGA QNALWLAARV LLNRRRKAAI EDPCYYALRE LLIQSRCNLV
241 SLRVDLDGLP PDAIPDDTDV IFTTPSHQSP TTATMPVPRR HALLERAREI DAMIVEDDYE
301 FELAFLGAPS PALKSLDRDG RVVYVGSFSK SLFPGLRLGY MVGSEPFIRE ARALRSLVLR
361 HPPGHIQRTA AYFLSLGHYD AQIRRMSSVL LQRRQEIERA IAQHGLTIAG RGVYGGSSLW
421 MQAPAGVDSE ALAMALRGES VHIEPGTAFF SGADRPRNYY RLGYSSIPTS RIAPGIERIA
481 GAIARHAG
SEQDB ID: 3101377GDJ
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWDEAAGGFA AMGSSARLKV LRVLVRAGQP GLTVGEIQQR TDMAASTLAH HLKALAAGGV
61 IEQTRQGRQT INRARFDQLE ALAQFIMAEC CADQCSAQIQ ETDNG
SEQDB ID: 3101377GDK
Reference:
3101377
Name: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVEITSSPRR APGRLTAWLK TPWTVAAGLL GAVALLDPAQ LGAVARFAAT ALAGTAPYIL
61 FAVLLLAWLK ATGAEVLVAR AFEGRETRMI LLAALFGGLA PFCSCEVIPF IAGLLALGAP
121 LSAVMAFWLS SPLIDPPTLL ITAGALGWPF AIGKAVAAVG LGLFGGFVVR ALSAGGALSD
181 PLRRAKSSCC GCGAPKPAAP HWRFWTEAER TRIFRAEFLS NGMFLLKWMT LAYVIEALLV
241 TYVPAEVIAG LVGGEGVMPI VVAALVGMPA YLNSYVAPPL LAGLMEQGMT GGAAMAFMVA
301 GAVSSIPAMA AVWSLVKPRV FALYLGLGLT GAVIAGMLFQ TL
SEQDB ID: 3101377GDL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDLLSKLIG PHRAVSVYAF LHTRGAALAA GALFAAILGG LLLFGRGEEP HEHEAFLTLD
61 VLSLTAINGD LRNGAIVSVR LPGGQATSIT STEGPVAASV TTTACVEKRV YVTSGEARYR
121 LKLPQHCTGQ
SEQDB ID: 3101377GDM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKPLMAKAT AVWLVDNTTI SFKQIADFVG MHELEIQGIA DGDVAAGVKG FDPIANNQLT
61 QEEIDKAEQN PLHKLKLKFN PAAAGEEKRR GPRYTPLSKR QDRPNAILWL VKFHPELSDG
121 QIAKLVGTTK PTIQSIRERT HWNISNMQPI DPVALGLCRQ SELDSVVQKA AAKKAAEGGV
181 MSDDERRKLV STEQSLGMDT GPRIPTAIEG LENFSLSEPI STSDDDEEDH RSIADADSFF
241 NLPKGGTDDE DEDDDPRY
SEQDB ID: 3101377GDN
Reference:
3101377
Name: RNase T2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWLVLWALT ATAAWAEGEQ AGDFDYYVLS LSWSPNWCET TGDARGADQC DARHDYGWVL
61 HGLWPQYHQG WPSYCRTPEA PPSRRMSAEM ADIQGSSGLA WHQWKKHGTC SGLSAAAYYA
121 LSREAFDSVI RPPVFRQLDK AVKLPARLVE EAFLKANPAL EPDMVTVTCA DGFIQEVRIC
181 LSTSLDPVPC GRDVVRDCRL KDAVFTPIR
SEQDB ID: 3101377GDP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCPGLHLCLW HARICGYQGF RHSFPGVSPM TRILALVLAA ATATAAWSQE LIDKGFVHGW
61 NLMVDPALGN GCLIQTVYED LSVVRLGYDR TGNRGYFTVF NKNWGSIEDG GSYPITFDLD
121 GERFEATAIG ANKGKVRGAT VFFTDREFVH AIAQRKVMTV YGAEGQQVMA IDLKGTSKAL
181 EYARECQKAQ N
SEQDB ID: 3101377GDQ
Reference:
3101377
Name: recombination protein, Isotype: RecR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: recR
Sequence:
1 MAGSTKDIDA LIELMARLPG LGPRSARRAV LHLIRKRALL LTPLADLMGQ VAATARECLN
61 CGNVGTSDIC DICTDERRAT GELCVVEDVA DLWAMERSGV FKGRYHVLGG TLSALDGVGP
121 DELRIPRLAD RVTAEAISEV ILALNATIDG QTTAHYIADQ LGGRVRLTSL AQGVPIGGEL
181 DYLDDGTISA AMRARKEL
SEQDB ID: 3101377GDR
Reference:
3101377
Name: ORF TIGR00103
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFKGLGGLGD MAKMMKSAQE LQTKMAQMQE DLNSVLVTGE SGAGLVKATA TAKGELKGLD
61 IDPSIFNGDD KEVVEDLILA AIKDAQAKAA EKAQEEMAAL TEAMGLPKDI KLPF
SEQDB ID: 3101377GDT
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTMTMQIVPN IALVDYPGAQ RAALHGLADM FRLIARLDPE AAGPEVTIVN ADTLPQQGVT
61 ALLFPPSIGG ARGALDHPLA RWAHRQHAQG ALACSVCAGA FWLGHAGLLD GRPVTTHWGL
121 EESFRETFPK ARLEPEHILI DDGDVITAGG LMAWTDLGLH LTGLWYGGAM VSRLARYLLI
181 DPAGREQRNY SSFRPERGHG DTAVLAAQRH MEMHLQGPLT VPQLAQVAGL PLRSFIRRFQ
241 AATGHAPATY LQALRIEKAR GALERGAENI AQIAWTVGYA DLPAFARAFK SRTGLTPGAY
301 RARFRAAFPP GAVSRRIPLA
SEQDB ID: 3101377GDU
Reference:
3101377
Name: isochorismatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKTALILVD IQNDYFPGGA WEVPGMEAAA GQAAHLLAAA RRDGVLVIHV RHEFASAEAP
61 FFRPGSSGAE IHASVAPTAT ETVLTKARPN AFVGTALLDL LQGGDIQAVT LCGAMTQMCI
121 DATARAAADL GFAVTVAADA CAARAVSFDG QDVPAEMVHA AFLAPLAASY GRVVPVSTLL
181 D
SEQDB ID: 3101377GDV
Reference:
3101377
Name: NADPH-dependent FMN reductase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDLTLLGLS GALRAASTNR KLLREAARLF GPSTYTEADL NLPLYDGDDE AAQGIPEAVQ
61 RLADQIAAAD AVIISTPEYN KGPSGALKNA LDWVSRTSGK PWADKPVAVM SAAGGRAGGE
121 RAQAVLRGFM VPFQPRLLSG PEVHLADSSN QFDENGHLTG ELYAQTLQSL MDKLRAEALR
SEQDB ID: 3101377GDW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIIVVGAEG DVGRAVCKEL GSRHEIIRAG RSRGDVTVDI ADPHSVAAMY ARTGPVDAVI
61 STAGEVHFAP LRDFDRETFM IGLRNKVMGQ INLVLGGFYT VAEGGSFTLT SGVLDRDPIP
121 MGSGAAAANG ALGGFVMGAA IEMPRHQRIN VVSPGLLDVS VPRYGAWFPG HEPVPAQRVG
181 RAYAKSVEGA LSGQVIIVA
SEQDB ID: 3101377GDX
Reference:
3101377
Name: transcriptional regulator, Isotype: MerR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIAEAAARS GLSIDTIRFY ERSGLLPPIA RGADGMRRFS PETVDWLRLL ASLRETGMEL
61 RAMRRFAELY RQGDATIPER RRILQDHAAS LNGRRAALDR CAALLAHKLQ RYCEIEGG
SEQDB ID: 3101377GDY
Reference:
3101377
Name: OmpA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFTKLSAAA GLTAILALGA CTDPASLSTN TDPNQKAKQG ALIGGILGAG VGAIANDSNP
61 GLGALAGAAI GAAGGGLIGN SLDKQAAELR QELANDGITI TNTGDRLIVS VPNDITFDTD
121 SSTVRPGLRS DLQKVAAHLV RYPQSSVQVI GHTDSDGEAA YNQGLSERRA GAVADILQAG
181 GVTYDRISTL GMGENSPIAS NLTPEGKARN RRVEIVVIPR N
SEQDB ID: 3101377GE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRMRAIGRVP ILVAGLLLAS VGQVAKAGEE VLAVTGSDGS AISFDLDALR ALPVSEIRTS
61 TIWTDGIQVF QGVSLRDLLD HVDAVEGTIT AVALNDYLID IPTSDATRPG PVVAYLRNGE
121 QMSVRDKGPL WIIYPYDDNP DYNTEEYYAR SIWQLIRLEV PK
SEQDB ID: 3101377GEA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRSTRLFEI IQILRAATVP ITAEDLAARL EVSARTVYRD IAALQAMRTP IEGAAGLGYV
61 MRGGYDLPPL NFDQEEVEAL RVGLSMLART GDSALQQAAE RVCAKIDALH DPADWLRVAP
121 WGAPADDPGQ GCTPIALLRS AVREARKIRI EYRSGEGAQT LRVLRPVGLI YHLDCTMVAA
181 WCELRQGFRN FRTDRIWACD LLEDSFAPQA KALRQLWQDQ SGWDEAAAMP AR
SEQDB ID: 3101377GEB
Reference:
3101377
Name: ADA regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNVQTTEEGY HYGVIRRAIE LIDAGGESMP LDDLAARMNM SPAHFQRIFS RWVGVSPKKY
61 QQYLTLGHAK ALLEERFTLL EAAQNVGLSG TGRLHDLFVR WEAMSPGDYA RKGADLTIYW
121 GWFESPFGPA LVMGTERGIC GIGFAAEAGA EATMEDLLSR WPQATFVEDP MRLRPWVLSA
181 FGAASDRLEP VPLYLIGAPL QIKVWEALLR IPSGQVTTYG ELAQSIGQPR AVRAVGTAVG
241 RNPVSWLIPC HRALRKSGGL GGYHWGLPVK RAMLAWEAAR SEA
SEQDB ID: 3101377GEC
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHETDQLYQ AVQATRPLLR NITAAVERGT LREGVTVGQR AILEGLSLTP GATAPQLGAA
61 LQMKRQYISR ILQEVQRAGL IERRTNPEHA RSHRYWLTPR GEAIITAIRA DEMAKLALFS
121 EGFSSVELTA YHKVQLALTR FFADLAKEA
SEQDB ID: 3101377GED
Reference:
3101377
Name: isochorismatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFLWIIPAG FVIAVLYVLL EIRKIGTPTK GPVIERATRP GTALVVIDMQ SDFTALPVWE
61 AAQLNTAMEN IRTAVDAARR TGMPVIAVRQ VYKAGLARLL NGWFNQGRGN AGSPGIGLDP
121 RLGLAPDVEV EKSMGDAFSE PAFVRYLEEN RIGTLILTGL DGCHCVKNTA FGALNRGYAV
181 RIDPKAVLAA NDAGWSKMKR NLTAAGAEMG ATAA
SEQDB ID: 3101377GEE
Reference:
3101377
Name: endonuclease III, Class: EC4.2.99.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nth
Sequence:
1 MAKQLDYHTI REIFTRFQAA DPEPKGELEH VNAYTLVVAV ALSAQATDAG VNKATRELFK
61 IADTPEKMLA LGEEGVTEHI KTIGLFRQKA KNVIKLSRIL VEQYGGEVPN SRAALQSLPG
121 VGRKTANVVL NMWWRIPAQA VDTHIFRVGN RTGICPGKDV DTVERAIEDN IPADFQQHAH
181 HWLILHGRYH CKARKPMCGT CLIRDLCQFE DKTL
SEQDB ID: 3101377GEF
Reference:
3101377
Name: kinase, Isotype: pfkB family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTYDVVGIG NAVVDVISQA DDSFLDLMGI EKGIMQLIEQ ERGEVLYASM KERVQTPGGS
61 VANTIAGAGA LGLDTAFIGR VRDDALGHFY ADAMNEGGID FVNPPVAGEL ATSRSMIFVS
121 PDGERSMNTY LGISTTLSSA DVPQEVTGNA KLMFLEGYLF DHDAGKSAFR EAARATRAAG
181 GKAGIAISDP FCVDRHRADF LSLIQHDLDF VIGNEAEIQS LFETDHLDDA LMLTSGICPL
241 VVCTRSGDGV TVMDGTLRID VPVEKVVPVD ATGAGDQFAA GFLFGMATGR DYETCARIGN
301 ICAREVISHI GPRPEANMVE LLKENGLL
SEQDB ID: 3101377GEG
Reference:
3101377
Name: transcriptional regulator, Isotype: PecS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pecS
Sequence:
1 MDHVDVIIRQ WAAERPDLDT RAMAVIGRVA RLSMAYTQGM QRTFGRYGLN PAKFDVLATL
61 LRSGPPYALS PGALLDTTMV ASGTMTNRID RLEQDGLVER RKNPEDSRSV IIALTPKGQA
121 LINEMMAAHV ATQSQLLEGL TAEEQEALTT LLAKALNSAE TSNSHADQA
SEQDB ID: 3101377GEH
Reference:
3101377
Name: membrane protein, Isotype: drug/metabolite transporter family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPPMSRTTD IALTAIAPAI WGSSYFVTTQ FLPAHSPFVV ALLRALPAGL LLMLLVRKLP
61 PRGWIGRLLI LGALNFAVFW SLLFVAAYRL PGGVAATVGA VQPLLVVFLS AVALGTQIRL
121 GAVLSALAGI VGVALLLLGP EARLDTVGVL AGLGGALSMA VGVVLTRKWR PDVPLVTFTA
181 WQLTAGGLLL IPVAWLAAPD WPGLSLTNLA ALAWLGLIGG ALTYILWFRG LARIEPAAVS
241 LLGILSPLTA VILGWLALGE ALSPVQGLGA VIVLGAVWIG QRPPGASRLS NLVQPRCGAK
301 AATTRS
SEQDB ID: 3101377GEJ
Reference:
3101377
Name: NUDIX family hydrolase, Isotype: NudH-subfamily
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPEEIAALP YRPCVGVVLM NGDGFVFVGQ RMDQNTDAWQ MPQGGVDEDE DPFEAALREL
61 WEETGVTADL VEMVAETDGW LPYDLPHDLV PRIWKGRYRG QEQKWYLFRF LGRDDQIDLE
121 TGHPEFSRWK WQDPDRLVAE IVPFKRDVYE RVVAAFAPHL G
SEQDB ID: 3101377GEK
Reference:
3101377
Name: 2,4-dienoyl-CoA reductase, Class: EC1.3.1.34
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fadH
Sequence:
1 MTAYPHMLAP LDLGFTTLKN RVLMGSMHTG LEETKDWNRV AEFYADRARG GVALMVTGGI
61 GPNMEGSVLP GASMMTSDKD VANHSIVTAR VHEAGGKIAM QILHAGRYAY GPKCVAPSPV
121 KSPISPFPPT ELDEEGIEKQ ITDIVNAAVL AQQAGYDGVE IMGSEGYFLN QFLVTHTNKR
181 TDRWGGSYEN RMRLPIEVVR RTREAVGTDF IIIYRLSMID LVPNGSTFDE VVQLAKEIEK
241 AGATIINTGI GWHEARIPTI ATSVPRAAFA WVTKKLMGQV SIPVITSNRI NTPEVAEEVL
301 ATGCADMVSM ARPMLADADF VNKAAAGQGD RIAPCIACNQ ACLDHTFSGK LTSCLVNPRA
361 CHETELVVAK AAAPKKVAIV GAGPAGLSTA ITAAQRGHAV TVFDKSDEIG GQLNMAKQVP
421 GKEEFWGLVD WYRVMLADLG VTLKLGKAVG AGDLSGFDEV VIATGVSPRD PAIPGQDRAN
481 VLSYIDVLRH KKPVGKRVAV IGAGGIGFDV SEFLLEEGHS PTIDLPQWMK EWGVSDPAEH
541 RSGLAPEGPQ PGKPEREVTL LQRKAKAHGK DLGKTTGWIH RATLKMKGVS FVGGVNYEKI
601 DDEGLHISFG EARENPTLIA CDTVVLCAGQ ISDRSLADAL EAKGVHCHVI GGADVAAELD
661 AKRAINQGTR LALTF
SEQDB ID: 3101377GEL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSENALYEPL SASDPLFSGY RFRTNDTGAP QTEGLGLGLG GENGLKPGDP VALDQHYVRA
61 VAFTREAGGK VSWFNSLFSA QASGKSVGVL QEAKSFMVGT IDGQQVEIGV AVLLKIEASS
121 FKSEAQVSVA NIAAEAQLGL SRAEMEISVR GFTGALGDML PAPSEVDLTS YTTYLNAFER
181 IQKHVFGPGG TAQYSPVVLG KLRTDAGGD
SEQDB ID: 3101377GEM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAVIFEVEP APGQQEADLD LAGRMRALLD DMPGFISVER FQSLTNPGKL LSLSFWEDEE
61 AVARWRQLTA HRGAQTRGRE ALFAGYRLRV AGVIRDYGMH ERDQAPEDSR ARHG
SEQDB ID: 3101377GEN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTCIIRYHI DPTKRAQFER YARTWGQAIP RCGADLIGYY APHEGSSTLA YGIYNIPSLA
61 EYEAYRTRLV ADPLGRQNYD FAQSEKFILR EDRTWLKLAS APHGGQT
SEQDB ID: 3101377GEP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKNILTAIGI GFLATAALAG GDTAANPEAR VYFANLADGD TVSSPVTVIF GLSGMGVAPA
61 GTEAENTGHH HLLVDRPPMG QGADGAEELT YALPADDNHR HFGKGQTEVT LDLAPGKHTL
121 QLVMGDYTHV PHATPIMSEV ITIEVK
SEQDB ID: 3101377GEQ
Reference:
3101377
Name: auxin efflux carrier family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIATILMGLV PSFLMVGLGG MVRGRLTPGA WQGLDKLNFE ILFPALLFFA ACNRPIAVQD
61 VIRIGPAVWA VMGLALMLGY LARRFGPERF LDFAGAWQTS WRFNTAMAFV AVPTLHLADV
121 GQMAVAIGMA VPVANLLAVS ALSRGGNLSL RATVQRVALN PFLLASVAGV GVGLSGYKIP
181 DPILAPAQML AQAAIPIALL SIGATMDWRA LTRLDLFNGY LCAVRLVLTP ALAWLLCGLL
241 GAEPGLAAVV ILFAALPTAS AAHVLASGFG ADRRLVATLI AQSTLLSAVT LPLWIYLIGL
301 GFQG
SEQDB ID: 3101377GER
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRLTEMEAF ANVVDQGGFT DAAKKMGISK SAVSKHVSSL EARLGARLLN RTTRRVSPTE
61 IGLAYYDRAR RVLNDAGEAD ALVTSMQSAP SGLLRISVAT DFGVNHLSPV LSDFLAEFPD
121 ITVNMVLNNR YVELISEGFD MAVRIGELED STLRARKLTE TTKRMIASPK YFEKYGHPQK
181 IDDLNEHKLL HYSSQASGNV WKLTAPSGEK RQVRTAGWLS VNDGQSLLNA AISGLGIAYL
241 PCYLFAEAME QGLVEDAMPS LPDEVQGIYA VYPPGRFTQP KVRAFIDFLV HSFADKGPMN
301 W
SEQDB ID: 3101377GET
Reference:
3101377
Name: sulfatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNILFIMFDQ LRWDYLSCYG HKTLNTPHID RLAAKGVRFD RAYIQSPICG SSRMSTYTGR
61 YVHSHGASWN GIPLKVGEMT MGDHLRAAGM GCWLVGKTHM RADEEGMARL GLEPDSLIGA
121 RVAECGFDVF ERDDGMLPEG PDGYYDPDGA KEYNKFLRAK GYESDNPWHD FANSGLDDEG
181 NVQSGWFLKN ATRPANIAEE DSETPYLTSR AMEFIEQQTG PWCCHLSYIK PHWPYIVPEP
241 YASMFGPEHV QDVVRSDSER QNAHPLFKAF MDTKVGEAFS RQEVRDAVIP AYMGLIKQAD
301 DQMGRLFKWL EDTGRMQDTM IVLTSDHGDF LGDHWMGEKT FFHDASTRVP LIIYDPRPEA
361 DATRGSVCDA LVESIDLAPT FVEAAGGKPA MHILEGESLI PILHGARDHT LRDHVICEYD
421 FSASPIAHLN DISVRQAVMF MVADKNWKLI HFEADPRPML FDLKNDPQEL VDLGGDPAHA
481 DVIAGMYDKL FRWTRRQSQR TTRSEEQLIA MRTKSRKRGI VLGIYDENET PLELTVKYRD
541 RKARPYKDYL KG
SEQDB ID: 3101377GEU
Reference:
3101377
Name: Phe-tRNA synthetase, Subunit: alpha, Class: EC6.1.1.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pheS
Sequence:
1 MDDLKAKYLG QIAEAADEAA IEAIRLAAVG KKGEIALMMR ELGKMTPEER QTAGPALNAL
61 KDEINSALAA KKAALADAAL DERLRSEWLD VTLPARNRRQ GTLHPISQAR EELTAIFAEM
121 GFSVAEGPRI DTDWYNFDAL NIPGHHPARA EMDTFYMHRA EGDNRPPHVL RTHTSPVQIR
181 SMEKMGAPLR VICPGGVYRA DYDQTHTPMF HQVEGLALDR DISMANLKWT LEEFVKAFFE
241 VDDVELRFRA SHFPFTEPSA EVDIRCSWEG GQLKIGEGDD WLEILGSGMV HPKVIAAGGI
301 DPDVYQGFAF GIGIDRLAML KYGIPDLRAF FDSDLRWLRH YGFAALDMPN LHGGLSR
SEQDB ID: 3101377GEV
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSLPHDVVG YARDYRDGYV SVRHRHPRHQ LIYAISGLMM AETDAMSHAI PPGYGLIVPA
61 QQPHEIRMIG AVRLQSLYVR AGLPRADALA RCRLVTISPL LAQLIAALCE MANPWPMPPR
121 ALHLSQLILI ELLAAPVSPL ALPYPTDPRL RRVCDGLIAT PASPRSLDDW AAEAGMSRRT
181 FSRHFQLETG LSFGKWAQRL RCQAALRGLA KGRPAARVAR ELGYANAYTM AAMMRRMT
SEQDB ID: 3101377GEW
Reference:
3101377
Name: pyridoxamine 5'-phosphate oxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPITDMTEL ESLYAAAVPA SLTKVRTRLS PLYRQWIEAA RFCVVSTVGP EGTDASPRGD
61 DGPVVRIVDD ATLWLPDWRG NNRIDSLRNI VRDNRVSLMF MVPGCQNVVR VNGTAFLTAD
121 GQARASFERK GRQPATVIVI TVDELYFQCA KALMRSGLWT RGDESGLVPT AGQFLREQDE
181 SFAAEAYDEG YTEYAKPRMW
SEQDB ID: 3101377GEX
Reference:
3101377
Name: flavin-containing amine oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTTSTRRQV LAAIGALGAL GLGTRGARSQ PQDRILVVGA GLAGLSAARI LRDAGRNVTV
61 IDARSRIGGR VHTSRTWPDL PMDLGASWIH GQRGNPLTVL AREAGAQVVA TRYDAAILKG
121 PSGRDIDPDL RGAEQILRGA LAEADGKSRD MSVLEALQAS SGWRGADEGV RRLVLYVVNS
181 TLEQEYGAPA RQLSAWYGQE DAEFGGQDVL FPGGFDQIAA YLARGIDIRL SAEVTGIAPG
241 HVRLADGSRI DADAIVCTVP LGVLQSGRIR FAEPLAQKRL AATRSLRMGL LNKCWLRFDG
301 IHWPDDVDWI GWLGPRPGLW GEWVSLARTL RAPVLVGFNA ADAATEVEGL SDRDTVAAAL
361 EALRSMFGAR FPAPRAAQIT RWGQDRHAFG SYSYNAVGSR PSTRTELAGP DWDGSIWFAG
421 EATSAPYFGT AHGAVLSGRA AAEGILATD
SEQDB ID: 3101377GEY
Reference:
3101377
Name: ribosomal protein L20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplT
Sequence:
1 MSRVKGGTVT HARHKKVLKA AKGYYGRRKS SFKVATQAVD KANQYATRDR KARKRNFRAL
61 WIQRINAAVR SHDEALTYSR FINGLNLAGI EVDRKVLADL AVHEPEAFGA IVAQAQAALA
121 A
SEQDB ID: 3101377GF
Reference:
3101377
Name: sensory box His kinase/response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTGFWIALV LVLIGYSALL GREAMVRLDT LSTAASDDIR WNMSQLEVEL LRLQSAALKA
61 RDGGQGDIQQ LRTRFDIFYS RTQIVLRGAL YDQAREIPEV QERLQSLRAF LAESVPIIDA
121 PEPILADRLP ELAHLVEQVS PEVRDLALTI VNTSARAADT QRLKVSETLR RLALSVLGLL
181 VALTIVALLL LRLYRSSQVV SAEKEAVKSR FEAAVKSALD AVLVVDTEGH IIEFNGGAEA
241 MFGYSRSEAL GQPMSDLIIP PHYRARHEEG MRRFREHGTS RVVGRGHLRL EGMRKSGEVF
301 PIELSISLAE TSDQLVFISF LRDITNRLKT EDDLREARDT AQAGAQAKAQ LLTVMSHEMR
361 TPLNGILGSL DLMERDELSP KQVRLVRAIR VSGELLLTQV NRVLDLSRLE SGMIEFPKEP
421 FALLPMVRRL TESLTAAAEE RGNRLQTTLV GDDPGVVLGN RIALQQALVN LLGNAIKFTR
481 NGEISLEVER LNDDRMIEFR ISDTGLGIPA KDIERIFDEF VTIDTAYARE NPGTGLGLSI
541 TRRLVWAMGG EIEVESIEHE GSLFLIRLPL EPGEAVELAS EKERGQPEPG PLKGKRVLVI
601 EDNDINRMLL LDMLEEFGCQ VVLARDGFEG VAAAKSARYD LLLVDISMPG KDGLETLREI
661 RAQEGPNGPV RAIAITANVR DEDKERFAAA GFDGFLAKPI SMLQLQEMLS GLLLRPEAEA
721 ERSTAREFIR RFGMAEYQRH LLGMVDALHA VCDDLANTEL SETLKARVHE QAGSAAILGR
781 ADLHSLLQEI EATDAADWPA RRGGMLDRLK TELARTRAVS LGG
SEQDB ID: 3101377GFA
Reference:
3101377
Name: ribosomal protein L35
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmI
Sequence:
1 MPKMKTKSSA KKRFKVTATG KVMAGQAGKR HGMIKRTTKF IRDARGTTTL SAPDAKIVKG
61 YMPYDR
SEQDB ID: 3101377GFB
Reference:
3101377
Name: pyruvate kinase, Class: EC2.7.1.40
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyk
Sequence:
1 MRRLRKVKIV ATLGPASETY ETIRALHEAG ADVFRLNMSH GTHDEIRAKH QIIRQVEQDL
61 DSPIAILADL QGPKLRVGTF VNEAEELAEG AAFRLDLDPA PGDAGRVCLP HPEIFQVLEP
121 GAHLLVNDGK IRLKVLDCGP DFAECTVVTG GTISNRKGVN VPDVVLPLAA LSDKDRDDLE
181 FACALGVDWL ALSFVQRARD VFEARALADG RAAILSKIEK PAAVEAFDAI LDASDGIMVA
241 RGDLGVELPV AAVPPIQKRL VRKCRAAAKP VIVATQMLES MIESPMPTRA EVSDVATAIY
301 EGTDAIMLSA ESAAGQYPLE AVRTMDNVAV EVEADPTYTQ IIAASRTAKG TTIADGIVAA
361 AREIAEKTDI KAICCFTQSG TTALLTARER PGVPIIAMTS LLATARRLCL SWGCHCVITP
421 ELERFKGAVV NAARAARAGG FAIETDQIVV TAGVPFNVPG TTNILRVAPC DERLIYNTDP
481 G
SEQDB ID: 3101377GFC
Reference:
3101377
Name: For-Glu amidohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYTPFFIHG EDRRSRWLIT CDHATNTVPP EICGGDLGLA REDMERHIAY DVGAYEVSRL
61 LGEMLAAPVI AANFSRLVID PNRGEDDPTL LMKLYDGSII PGNRHADAAE RERRLNMCYR
121 PYHDALARLA ARPGVVLVSM HSFTRQLRGR APRPWQIGVL HTADQRFSDP LIARLRGEAD
181 LCVGVNQPYT GVLPGDAIDT HCTAFGRPNA LIELRNDLIG DPAGQHAWAE RLAPLLQDAL
241 ADSGL
SEQDB ID: 3101377GFD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKQTEIEIQ AAAFRRLQKH LMQDRTDVQN IDLMNMAGFC RNCLARWYQE AANEKGIEMG
61 KDEAREIYYG MTMAEWKANY QTEANAEKQA AFEVAFKENV TERD
SEQDB ID: 3101377GFE
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADMSEFEPR FAGYAQKVRD SFARQPVMAT LGARIDTLLP GRVELCMPYD RALTQQHGFL
61 HAGIVSTVLD SACGYAAFSL MEEEAAVLTV EFKVNFLNPA EGERFAFRAE VVKPGRTLTV
121 ATATAYAFRD GEERAIATMT ATLMALIGRS GINQ
SEQDB ID: 3101377GFF
Reference:
3101377
Name: D-AA aminotransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRTVYVNGE YLPETEAKVS IFDRGFLMAD AVYEVTSVLD GKLIDFDGHA VRLKRSLDEL
61 EMAEPCSQQE LLEIHRKLVD LNGIVAGLVY LQVTRGSDGD RDFVFPAADT PPSLVLFTQS
121 KPSLADSPES KRGAKIISIE DIRWGRRDIK TVQLLYPSMG KMMAKKAGCD DAWMIEDGYV
181 TEGTSNNAYF VKNGKIVTRP LSNDILHGIT RKAVLRLAQE AQMEVEERLF TIDEAKTADE
241 AFTTSASAFV MPVVEIDGAT LGDGTPGPIA RRLREIYLDE ARKTAI
SEQDB ID: 3101377GFG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTWVILTGV CLACVAVLGL LRWRDLRADN DEALRLQAFQ PAPPRRFDPA MVADLPDPAR
61 KFFLWAIEPG AELFTVAALE MQGKFGMGDK ARPGYMPMTA RQTLASPHGF VWAMRAGQGL
121 RRMSGSDSAG WTRFWLAGLV PVARFGGTQD HRRSAFGRYA AEAVMWTPAA VLPQPGITWQ
181 GIDAETARVI IAHDGMEQAI EMTVDAEGAP KKIVFERWSN ANPERQWRLQ PFGAILSAPQ
241 SFAGIRIPTH VEAGNHFGTD AFFPFFIVDV TDLRFPQAAR T
SEQDB ID: 3101377GFH
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIDVSRDVF RLAQVFTISR GSRTEAKVLT VRIADGAHHG WGECVPYARY GETLESVEAQ
61 IAGLPEDFDR AALFDLLPAG AARNAVDCAL WDLESKRAGK RAWDLAGLPA PGPEITAYTL
121 SLDTPDAMQA QAAKNAHRPL LKIKLGTPDD MPRLEAVRAG APDAKIIIDA NEGWSAEVYA
181 DLAPHLVRLG VALVEQPLPA GQDEALIGME RPVPVCADES CHDRASLAAL KGKYDVVNIK
241 LDKTGGLTEA LELRRAALAE GYDIMVGCMV GSSLAMAPAT LVAQGALVTD LDGPLLLAED
301 RETPLTFDAA GVHPPSAALW G
SEQDB ID: 3101377GFJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMRPKRAKSA HGDESAANIT RNARFSGPLV LTGIKWRPAM IETPYLLFLG DAPDQLAAKV
61 AVGIKDWRPE NAVGQLRMEG CKADLGLTDM DLAQAREAGA KTLVIGVANR GGVISQDWKK
121 VLVMALEEGF DLASGLHNLL RDEPDLVAVA EACGRKLHDV RIPSVKYPIA NGVKRKGKRC
181 LAVGTDCSVG KMYTALAMDA EMRARGMKST FRATGQTGIL ITGDGVPLDA VIADFMAGSV
241 EWLTPDNDED HWDLIEGQGS LFHVSYSGVT MALVHGGQPD ALILCHEPTR EHMRGLPGYQ
301 LPTLEAVRDM ALSLAKVANP ACQVVGVSIN TQHMSEADAR AYLAGIEAEM GLPATDPFRF
361 GPGKLVDALA AM
SEQDB ID: 3101377GFK
Reference:
3101377
Name: malyl-CoA lyase, Class: EC4.1.3.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mclA
Sequence:
1 MSFRIQPAAP ARPNRCQLFG PGSNTKLFVK MAASAADVIN LDLEDSVAPS DKDSARANVI
61 EALNTIDWGN KYMSVRINGL DTPYWYRDVV DVLEQAGDRL DQIMIPKVGC AADVYAVDAL
121 VTAIERAKGR SKPISFEVII ESAAGIAHVE EIAASSPRLQ AMSLGAADFA ASMGMQTTGI
181 GGTQENYYML REGTKHWSDP WHWAQAAIVA ACRTHGVLPV DGPFGDFSDD EGYIAQAKRS
241 ATLGMVGKWA IHPKQIALAN QVFTPSDDAV TEAREILAAM EAAKAKGEGA TVYKGRLVDI
301 ASIKQAEVIV AQAELIAANG
SEQDB ID: 3101377GFL
Reference:
3101377
Name: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase, Class: EC1.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: linC-2
Sequence:
1 MTMQQRKGMT MELKGKTIII TGASSGIGAS AALLFASEGA NLVLGARRAA ELNQLTGQIT
61 QSNGRAVCLA GDVTDEAYAH RLVDLARSEY GRLDGAFNNA GMMGEIGPVA EMSAANWTEV
121 ITTNLTSAFF SAKAQIPALV EQGGVLVFTS SFVGVDNGGM PGMGAYAASK AGLVGLVRSL
181 AADHAAEGIR VNALLPGGTR TAMAGDDPDT HDFIAGLHPM KRMGEPKEIA QAALFLMSDR
241 ASFVTGTAMS VDGGISARLL
SEQDB ID: 3101377GFM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPQMTELTL FHTAEVHRAT FDALAARIAP GARLTHVVRP DWLARAQGGI GADLADEITT
61 ALAQVPVALC TCTTIGGLAE QAGALRIDAP MMRVAAQSGG PVLLVCCLES TKAPSTALLE
121 AAFAAEGHAA RIAHLDLSGL WPLFTEGDGD AFAEAIARRV ESALVAQPDL SAVVLAQASM
181 AGAQARVRAN VPVLASPELA LRAALERAGT
SEQDB ID: 3101377GFN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKAIWIGALA GLAMICAGAL AAGPAKLQPA NPQPGGLKRG LSVSYGYAKE GEHIRQLAEA
61 RSVLKAGAQR GKALRGLDYR DTAKGENTLT SARAENVAAA IRGYIRFDAP GIYEIDFFTN
121 DGVDARIGGQ RVGHFDGRQT CDSTIVSEVE VPQAGWYKVD ITYFNRLNTS CLMMRWGQKG
181 KGMKWVPNEV FGY
SEQDB ID: 3101377GFP
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKIDEINRK ILHELSRDGR ISNLDLAARV GLSPSACLRR VQELERAGVI SGYRAVLNPA
61 ALGIGFVAYM GVGLGEHTKA AQERFERAVA RAPEVVECHN ITGTIEYLLR VECADLPSYK
121 TFHTDVLGTL PHVNSITTYV VMGSPKDLRA
SEQDB ID: 3101377GFQ
Reference:
3101377
Name: LysE family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYDLLIALL LFAFVSSITP GPNNLMLMAS GANFGFRRSV PHMLGIGLGF TFMVVMVGVG
61 LVQVFDAWPP SYSLLKYASV VYLLYLAWKI ANAAPAKRGA AAGRPMTFVQ AAAFQWVNPK
121 AWAMALTAIS AYAPGQTLTA VLVVAAIFGA VNLPSVSTWT VLGQQMARLL TNPRRLTVFN
181 WTMAGLLVLS LYPVLWPG
SEQDB ID: 3101377GFR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRLRVWPDL APPFEIYHDD PEHTAPEALR TDLCIPLRP
SEQDB ID: 3101377GFT
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDYEGRILR VLNYIHDNPG GDLSLDQLAD VAAMSRFHWH RVFRALTGET CAQTVRRMRL
61 HRAATALVQS RARVDEIAAS VGYPNPVSFA RAFAEAYGQS PSAFRRTNRL LPPLPPFRTG
121 DYPMLPVEIR TEPARRLVGI PHQGAYSAIG RSFESFSALC QTRNLWPQIA ETVAIYLDSP
181 DTVPEAELRS FAGGTWRGDD IPQGMEEHRL PGGKTAVMTY KGPYSGLAAA YHSLFGTWLP
241 ASGEEPAESP CFEIYLNDPR TVPPEELLTE VCLPLK
SEQDB ID: 3101377GFU
Reference:
3101377
Name: Ac-CoA carboxylase, Subunit: carboxyl transferase alpha, Class: EC6.4.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: accA
Sequence:
1 MTQYLDFEKP LAEIEGKAEE LRALARANEE MDVAEEAAAL DAKAAKLLDE LYRDLTPWRK
61 CQVARHPERP HCRDYVDALF TEYTPLAGDR NFADDLAVMG GLARFNDRPV MVIGHEKGSD
121 TKSRIAHNFG MARPEGYRKA VRLIEMAGRF GLPVVTLVDT AGAYPGKGAE ERGQSEAIAR
181 STEMCLRAGV PLVSVIIGEG GSGGAVAFAT ANRVAMLEHS IYSVISPEGC ASILWKNAEK
241 MREAAEALRL TAQDLLKLGV VDRVIPEPRG GAHRDKTAAM EAVRGAIAAM LKELDGKSAE
301 ALIKDRRKKF LDIGSKGLAA
SEQDB ID: 3101377GFV
Reference:
3101377
Name: peptidoglycan-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MINRRFFTLG LGALSLSACG GGAPLTASTP AAAPAQSWPT VPNAGWEAWV AGFRSRASAQ
61 GINATTLDRA FRGAGFIPKV IERDRNQTEF KRSLEDYLAI AASDERIATG RQMLQQHGAL
121 LTRIEAHYGV DKEIVTAIWG LESRYGARRG DVPIVSALST LAYDGRRGAF FEKQLIAALK
181 ILQNGDTSPQ NMTGSWAGAM GHTQFIPTSY LAYAVDFTGD GRRDIWSEDP TDALASTAAY
241 LANAGWVRGQ PWGGEVGSAA ANSGSPSAVL QPQEPGPKIA VFKNFSVIKR YNNSDSYAIG
301 VGHLSDRLKG GGPFRASFGP DETGLTLEER KELQSRLTAA GYDTGGADGV IGSKSTAAIS
361 DYQRARGLAV TGTPSVELLR QLRGG
SEQDB ID: 3101377GFW
Reference:
3101377
Name: sulfonate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPELRVPFRG GGFRPEARRG TGIAVFLLLL FLIEWGTRTG WITNLTLPRP SDVAATLGDL
61 ARSGALWTHL LPSLSRLAVG SALGISAGVG VGVLIGLFSY IRAGLVPLVA AIFPIPKIAL
121 LPLFVIWFGI DEGSKYALIA LGTFTPTVVA TYGAVDNVDR GLIRMGQSFG LGWWSIVRKI
181 VLPGALPGIL SGLRVSLAIG IILLVAAEML GAEHGIGAYI LQAGALYDLE RLFAGVVILS
241 CLGVLTSWAI GKIEKRLLVW RG
SEQDB ID: 3101377GFX
Reference:
3101377
Name: sulfonate ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELAVRGLTH RYGDMVVLND VSLHIPAGEI LCVVGPSGCG KSTLLRMLGG LEQPDWGEVL
61 QGGTPPEGCL NPLTYVFQDF ALLPWRSVAG NVSLVLEDHR LPGDRVRAII EDVLARTRLS
121 DFHDALPRQL SGGMKQRVAI ARALAVNPAV MLLDEPLSAL DAQTRELLME DLVGLWERQP
181 FTGVYVTHNL AEAVRLGHRI VVLSRRPGRV REVIEVPGAL SERHAGDAGL EAIQAHLWAL
241 MRDEAVAADL ELLDA
SEQDB ID: 3101377GFY
Reference:
3101377
Name: sulfonate ABC transporter, Subunit: periplamic sulfonate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMNRFSRRGA LGLIGGAATL PMLGTPALAN TKMTVGALRF TSHAASFVAF ERGYFAEEGL
61 DVEFKFFEAA QPMAVAIASG DADYAVTAIT GGLISLAEKG AAKVIGGALS EEKGIDGQMI
121 LASNAAYDAG LTSAAALDGR SFAVTQPGSS FHYMGAKIAA VEGASVKFTP LQKVGAIIGA
181 MKSGQVDAWT IVPHIGKALS GGGAVKHIGM VADYLPDYQV TTVFTSASNA SGERAQTEAF
241 LRAFSRGAAD FNAALVDKTA GDEAGVEMVK LVHKYVYADQ PFEKAEKSIR NGAMRLNKDS
301 ALNMGSVEDQ LGWFKSEGMV KDSITTETLV DSSYVPMI
SEQDB ID: 3101377GG
Reference:
3101377
Name: FMN-binding/pyridine nucleotide-disulfide oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFKHVFAPV QLRHKQLKNR IVFGAHTTNM AHDGLPGDQH LAYYLERALG GAAMIVVEPM
61 PVHAAAVLTR GNFRHSSDDV IPHFARITQA CKAHGTVMIQ QLYHVGAHGD WDNSWHANWS
121 PSGGPSYHDN DGSHAMTEDE IEETIQGFVD AAVRCQKSGF DGVEVWAAYH CLLDQFWTPF
181 SNQRSDQWGG SLENRTRLSR EIMARIRAAC GPDFIIGLSV NDDSDKPVCL SHDEMVEIVA
241 LHDAQGLMDY VTVGAGSYFN FYKLLPSFQY AENLGADLAE RLKQANLTAL VTAEANIRTP
301 DNANTVLGAG RADLVSIVRA QIADPHLVAK AERGAPEDIR GCLSCNQQCW GRRGRDYYIS
361 CLVNPSAGHE YLWGGDRFTP AQTPKTVLVV GGGPAGLECA RVAAERGHRV ILAEAGPELG
421 GQFRLAGLQP RRAQITDLIG WYERQLRQLQ VEIRHNTYLD AQDVATIGAD AVILATGSAP
481 PETGFQKALP QVTRLPGIER GQVWSIHDVM TRAARLGDHV VLLDEAGNWR GIGTAWHLAE
541 KGHKVTIVTP DPMIGRELAR SATDFPARAT LAGLGVRFVT ESALTGWSDA GAEVVSLLTG
601 ETEVLTADSL VLATANTPET GLAQELRAMG IEATSIGDAA APRLAAAAIH EGRKTGLAL
SEQDB ID: 3101377GGA
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQPVRPPDPT TAAHDRVYRT LRTRIMHGEL APGQALTLRG IGKEFDVSMT PAREAIRRLV
61 AEGALFLSSS GRVSTPELNS DRIEELAALR ALLEVELASR ALPRAHMALI DRLQTINGTV
121 AEMVSKRDAV GYIRTNLEFH RTLYLRAQAP AMLAMAETVW LQLGPTMRAL YGRLRRTDPP
181 QYHKLIIAAL KAGDEPGLRL AVRSDVTQGL RLLVT
SEQDB ID: 3101377GGB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWRLSKPLG QRKRDMGQHH LPGQPPVPLT LRRSARARRI SLRISQLDGR VTLTLPPGVP
61 EREAIDFAQS KADWIRGHLA RHMPRHQPGF GDAIPIEGAP TRIVPASGRR IQLRPGLVEV
121 PPQGMEARLH RFLRELARDR LAAACDFYAS ELGRPYARIS LRDTRSRWGS CTTEGALMFS
181 WRLILAPPSV LRYVAAHEVA HLAEMNHSSR FWAEVTRIHG PYVAPRQWLR DNGTQLHSYR
241 FDSAAS
SEQDB ID: 3101377GGC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKEEWGVKR LCPTTGKRFY DLNKNPIVSP YTGEIVELDL GKGRMIAADA EDAATRKARQ
61 TVDDDEIVLD DSDDDSVDMD IDDDILEDDD DEDSVSLDDI KDMSSDDE
SEQDB ID: 3101377GGD
Reference:
3101377
Name: cold shock protein, Isotype: CspA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cspA
Sequence:
1 MANGTVKWFN SQKGFGFIAP EQGSKDVFVH ISALERSGIQ KLDDGQAVTF DIESGRDGRE
61 SAINLALA
SEQDB ID: 3101377GGE
Reference:
3101377
Name: Glu-Cys ligase, Class: EC6.3.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gshA
Sequence:
1 MSIPQSGGGP IERHEQLAEY LASGCKPKSE WRIGTEHEKF GFCKDTLKPL PFEGTRSIVA
61 VLEGLRDRHG WAEMREGGNL IGLQKDGANI SLEPGGALEL SGAPLETIHE TCDEVNTHLR
121 EVKDIADEIG VGFIGLGAAP IWTHDQMPLM PKGRYKLMDA YMQKVGTMGT TMMRRTCTVQ
181 VNLDFGSEAD MVQKLRVAIA LQPVATALFA NSPFFEGQPN GHKSWRARVW RDLDADRTGM
241 VPFIFDEGFG FESWVQYALD VPMYFVYRDG TYINALGQSF RDFLNGRLPA LPGETPTLSD
301 WADHLTTLFP EARIKKYIEM RGADGGPWRR LCALPAFWVG LTYDQSALDA AWDLVKGWDA
361 ETRETLRIEA SRQGLQARAG NVRMHDLARE VLAISEAGLK ARARPGAGGL VPDETHFLNA
421 LKDSVESGKV PADELLDHYQ GDWNGDLSRI YAQYSY
SEQDB ID: 3101377GGF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFIRPEARA ALWRWREVLA GLAVALLGLS WIAGPGGLLG WTGWPVAAAG LALAVVGVQR
61 ARFRTGGGGP GIVLLDEGEI TYMGPLGGGS VAAAEIERLT YDPTATPPHW LLEQEGRAVL
121 AIPVNAEGAE VLFDGFSALP GLRTERVLAV LKGDARHAVV IWERTPSRPA TLPLH
SEQDB ID: 3101377GGG
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVMKRVVPSD LDDVRAFLRL QPNRAMFPLS NLHRFGLDGA APYAVSMWMS KVAGQVTGVL
61 SVTRSGTVMP NLPEADLDSA RDILRETDIS GIIGPADIAR PLADRLGLSG RSATLDRDEP
121 HFTLDLKDLQ CPDGPATLHP LGTADPEEMI RWRVAYCREA LHMSPEQAQR QGEVDHDTYI
181 AADSHRVLMQ GGKALAMTGF NASLPDIVQV GGVFTPPELR GQGHARRALA LHLIEARARG
241 VTEATLFSAS DAAAGAYRGI GFRQIGLWTL LLFETPQRIT P
SEQDB ID: 3101377GGH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAKIRLYVE QALGQGQPVQ VSRDQAHYLF GVMRLGVGDW VALFNGRDGE WQARVGEAGK
61 RGGELLCESQ SAPLRMPPDL WLLFAPIKKA RTDFIVEKAA EMGAARIVPV QTEFTNSERI
121 RQDRLQAHAV EAAEQCGGTY VPEVAELQKL GPLLDRWPAE RQLMFCDETL AGRSSALSGL
181 LAGQGENART GGPSGPWAIL IGPEGGFSER ERARLAALPN AHAVSLGPRI LRADTAAVAA
241 LTLWQQALGD W
SEQDB ID: 3101377GGJ
Reference:
3101377
Name: 4-hydroxybenzoate polyprenyltransferase, Class: EC2.5.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ubiA
Sequence:
1 MQGQAPTPDG QVADAVTGNW VDIHAPAWSR PYLRLSRADR PIGTWLLLIP CWWGLALAML
61 DGQDARWGDL WIALGCAIGA FLMRGAGCTW NDITDREFDG RVERTRSRPI PSGQVSVRMA
121 VVWMIAQALL ALMILLTFNR MAIAMGVLSL LPVAVYPFAK RFTWWPQVFL GLAFNWGALL
181 AWTAHSGSLG WGALFLYLAG IAWTLFYDTI YAHQDTEDDA LIGVKSTARL FGAQTPRWMS
241 YFLVATVSLM GIAVFEAALP DASILALVLA LAGPWAMGWH MAWQLRGLDL DDNGKLLQLF
301 RVNRDTGLIP LIFFVIALFA
SEQDB ID: 3101377GGK
Reference:
3101377
Name: OmpA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPLTLVVA LTFVLAALIC GVAASFAVTA VEENSEIAVR RGLDRAGHNW AEVQANGLQV
61 IVTGMAPDEA TRFNALSVVG GEVDASRVID LMQVRPSAGL AAPKFSIEIL RNDSGVSIIG
121 LVPASMNRQA LLTSLKRLAD GQQVADLLET ASYPVPEGWQ DAMDYAVVAL GMLPRSKISV
181 SAGRVTVRAI SDSGADKKRL EQALNRAAPP SLRIGLDIAA PRPVLTPFTL RFLIDQDGAR
241 FDACAADTEA ARDRILSAAR AAGMQESASC TIGMGVPSPR WAKAAELSLA ALAELGQGTV
301 TIADADITLV VAQGTDPALF DRVVGELETG LPDVFALHAV LPEPETKQTA GPPEFTATLS
361 PEGLVQLRGR LGSDHAREMV DSYAKAAFGS TAVYTAARIV PDLPADWPVR VLAGLEALAT
421 LRNGALVVSP DRVMLRGTSH VEEASAEIAR LLADKLGENQ SFDLEIAYEA PPEPAETSLD
481 ADRCEALLAE VQANDKIAFE PGSATIAASA SGTMDRIADL LQSCGPIRLE IQGHTDSQGR
541 EEMNQQLSQA RAQSVLNELR ARRVLTASYA AVGYGESQPI ADNGTEDGRE ANRRIEFRLI
601 RPEQADEHTT ALEQVEAEQS GDADTEQSTT GTTGEDQ
SEQDB ID: 3101377GGL
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNRTEFIITT AIILFVAFSM GWFANWLVHR FTRVRQSDVA DLDRMSQELH EAEEARDQAI
61 TYLQQREAEL TNQLTQTEAE LGAAMDGLRA ARQEAEELRH HHG
SEQDB ID: 3101377GGM
Reference:
3101377
Name: molybdopterin-converting factor, Subunit: 2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVVVQQEPF DLGAEANAFA AADTGMGAIV TFTGVVRDLA QGDLDVMEIE HYPGMTEKAL
61 ARIAAEAQER WSLGDVLVIH RYGRLAPGDR IMMVATAAPH RKDAFEAAEY LMDYLKSRAP
121 FWKKEITGTG AGWVAAKDED EDALTRW
SEQDB ID: 3101377GGN
Reference:
3101377
Name: molybdopterin-converting factor, Subunit: 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: moaD
Sequence:
1 MDVLYFAWVR ERIGIPRERI ETGAETVAQL VEELRAREPR YEAAFADLSA LRVALDQDLA
61 DFDASLSGVR EVAFFPPMTG G
SEQDB ID: 3101377GGP
Reference:
3101377
Name: CDP-diacylglycerol-glycerol 3-phosphate 3-phosphatidyltransferase, Class: EC2.7.8.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pgsA
Sequence:
1 MKWNLPNILT LLRLLAAPGL AVMFLYFTRP YADWFALILF VSAAITDWFD GYLARAWKQE
61 TKMGAMLDPI ADKAMVVIAL MILVGYSTEH WTPWLVLPAT VILFREVFVS GLREFLGDVA
121 GTLKVTKLAK WKTTAQMIAI AVLFSQGIFE HYLVMSSFGM DQGIVDQIMA GEVADLQGLR
181 WKLDGMIWSG RVGLWLLWIA AGLTLITGYD YLRKSMPHLK ETR
SEQDB ID: 3101377GGQ
Reference:
3101377
Name: beta-lactamase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVMQGFPPA EADRATLANW RTRPYSAWAF HHVREIVPSA PIANAPGDVW RLEQGAPLLS
61 DELLGDILAP TCTDALVVLH QGRVVHEVYR NGMGAEDPHI LMSVSKSMLG LLAGILADKG
121 LLDLTAEITD YIPELAATAY AGATVRQALD MRVGVEFCED YTATTGPIIA YRKAANWNVV
181 EPGDTVPDLR GFQQTLTAHD GPHGGRFHYV SPVTDLLAWV IERAAGRRYA DLMSEHLWRP
241 MGAEQPAYIT VDRIGGPRAA GGMCVTARDL ARVGQLICRG GARADGRQVI PARWLDDITT
301 QGDHEAWATG DFAERFPDYD MVYRSKWYIH RGAKPLIHGM GIHGQFVFAD PARDLVVAWM
361 ASEADPTSDG AFGLRYRLIE QLRAAV
SEQDB ID: 3101377GGR
Reference:
3101377
Name: UvrABC system protein, Isotype: C
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: uvrC
Sequence:
1 MQDTNPSQPD SPITGYACIQ DYLRNLSGAP GVYRMLDAQA RVLYVGKARN LKARVSNYAR
61 PGHSPRIERM IRETASMMFL TTRTETEALL LEQNLIKQLK PKYNVLLRDD KSFPNILVAK
121 DHSFAQIKKH RGAKKEKGTY FGPFASAGAV NRTLNQLQKA FLLRNCTDAV FESRTRPCLL
181 YQIKRCSAPC VGLISDQDYA AAVKDAERFL SGRSTRVQEE LAEQMMAASE AMEFERAAAL
241 RDRIRALTTV QGTQGINPRG VAEADVVALH LENGQACVQV FFIRANQNWG NRDFYPRVGE
301 DVSAAEVMEA FLGQFYDNKE PPRQLILSDA IENADLMTEA LSEKAGRKVE LLVPQRGEKA
361 ELVSGALRNA RESLARRMSE SATQTKLLGG LAEAFDLDGP PQRIEVYDNS HIQGTNAVGG
421 MIVAGPEGFL KNQYRKFNIR GDDLTPGDDF GMMKEVLTRR FTRLLKEDPD RDKGLWPDLL
481 LIDGGAGQVS AVHEIMMAHG VQDIPMVGVA KGIDRDHGKE EFHRTGQRPF ALKRNDPVLY
541 FIQRLRDEAH RFAIGTHRAK RAKAVSATPL DDIPGVGAAR KRALLAHFGS AKAVSRADLA
601 DLTAVEGVSA GLAQKIYDFF HES
SEQDB ID: 3101377GGT
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALALVTGAG IRLGRAMALY LAGRGHDVAV HYARSEADAA NVVERIHRLG RRAVALQADL
61 LDEGQMQALL PRACEALGEP VTCLVNNASI FEYDSLSSAS RQSWDRHMES NLRAPFVLTQ
121 AMAAQGLEPV QDDNGEPVAT GLIVNMIDMR VRKLTPEFMT YTLAKAGLWT LTQTSAQALT
181 PAIRVNAIGP GPTLQGHRQS PEHFANQRAR TISGRGANPQ DITAALGYFL DAPAVTGQLL
241 CVDGGQHLGW RTPDVLGVE
SEQDB ID: 3101377GGU
Reference:
3101377
Name: K-dependent Na/Ca exchanger-related protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMPWILSALG LVILLLAGDA LVRGAVNLSL RLGVPALIVS LTIVAFGTSA PELLISIKAV
61 LEHAPGIALG NVVGSNTANI LLVLGVPALL ATLHTSECNT RRNYVLMILA SVLFIGLAFC
121 GTFTATSGLI LLAGLGLILA NAFREAHAHR KACGDPCADD DLEALEEADP DMPWWRIGIY
181 LLLGLIGLPM GAHLLVENAS IIARTYGVSE TVIGLTLVAV GTSLPELATT VMAALRRQAD
241 VALGNVIGSN MFNLLAIIGV ATMFGPIPVD PEFLRFDLWV MLAASLLLIP FVFFKWDITR
301 TWGVFLTGIY LVYIVVVLI
SEQDB ID: 3101377GGV
Reference:
3101377
Name: peptidase, Isotype: S49 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRVLFVGRA RSTSAAMTLA LPFKKKPPLV AVVRLSGAIG LAGRGALNDT TLAPMLERAF
61 RKGKPAAVAL EINSPGGSPV QSSLIGARIR RLAAEHKVPV YAFVEDVAAS GGYWLACAAD
121 EIWADDSSVL GSIGVISASF GAHVFLARQG FERRVHTAGK SKSMLDPFSP EKKEDVTRLK
181 GLLGDIHQNF ISHVKERRGD RLDATEDLFT GEVWLGARAR DLGLIDGIAH LKPKMQERFG
241 DKVRFRRYGV RRPFWSRFGV HLAEDALAGI EERAAFARFG L
SEQDB ID: 3101377GGW
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNWAAIAAIY RFEMARFFRT LAQSFISPVL STSLYFVVFG TAIGSRIQEI EGVSYGAFIV
61 PGLIMLSVVM LSISNASFGI YFPKFLGTVY ELLSAPVNFI EIVIGYVGAA ATKALFVGLV
121 ILATASFFVD LRIEHPFAMA AFLVLTCLSF SLLGFIVGIW ASNFEQMSLV PQLVVTPLIF
181 LGGTFYSISM LPPAWQTVTL FNPVVYLISG FRWSFYGLAD VPVGLSLLAI AGFTGLCLAV
241 IWWIFRTGWR IRS
SEQDB ID: 3101377GGX
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTILSIRDL RKSYADGFEA LKGVSLDIRE GEILALLGPN GAGKTTLIST VCGITTPTSG
61 SVTVGGHDIQ SDYRAARRMI GLVPQEIALE PFEKVMNTVR FSRGLFGKRA NDGRIEEVLR
121 KLSLWDKRRN AIKELSGGMK RRVLIAKALA HDPRVLFLDE PTAGVDVELR KDMWEIVAEL
181 KAAGVTIILT THYIEEAEAI ADRIGVINKG ELLLVEDKAK LMARMGRKQL DVLLTRPIAE
241 IPASLARHNL SLGAAGDVLI YSYDTHADRT GITALLNDVA QAGLVLRDVV TRQSSLEEIF
301 VTLVKGETQ
SEQDB ID: 3101377GGY
Reference:
3101377
Name: carbon monoxide dehydrogenase G protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQMQDTRAIP ADPATVYAAL LDPAVLCACV PGAQEVTGTA NDGFEAVVVQ KVGPVKATFR
61 GTVTLSDLVP GAGLTLAGEG KGGAAGFAKG GAEVRLAPDD AGGTLLSYRA EARVGGKLAQ
121 LGSRIIDGFA RKMADQFFDN LQAQFTVQAE EDPQGAEEAA PPRKTWFGRG
SEQDB ID: 3101377GH
Reference:
3101377
Name: pyrroline 5-carboxylate reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIGVIGTGT IATAVVHGIA GDGHAITVSE RSAANAQALA AAYPNVRVAS NQVVVEECDI
61 LTLGLMAEQA PEILGPLPFR ADQQVITLMA GATLEQVAQM VAPARAAAIM MPFPSIAQGG
121 SPIMMQGDAD LVAALFGARN RIFAVRDAAE MAAYLCAQAV LSPVARMVDD AAGWLATRVS
181 DPVQGEAFLR ALVASSLADT DSASLIEALN TPGGYNQRLR LHMEGAGMGD SLRAGLDALE
241 TGA
SEQDB ID: 3101377GHA
Reference:
3101377
Name: integral membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDTAHHRPG AGIAFIMAGM LAISLNDMLV KQLSGSYPLH QIVFTRSAVG IVLSLGLVWA
61 EGGWRILKTK HPFLHALRGL LVVISNMSFF AALAVAPLAD VTALFFAAPL FITLLSVPIL
121 KERVGPLRLG AVLVGFSGVI LMQRPWQGAE SLEASRLVLL LPVLSALTYA LLQLMTRKLG
181 VTSKASALSV YIQLMFILVG ALFYLVAGDG RFVDESSDPS LIFLLRAWTW PSGQDWLFLT
241 GLGLNSAIIG YCLAQAYRQA DAATVAPFEY VGLPLAVFWG WMIWGDLPDW EVWAGMTLIA
301 GSGLFVFLRE RAKARVVARS EVKGRY
SEQDB ID: 3101377GHB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGESGMSIAD PSGPLDQPTQ AEPLTIRLTR AAAAIASRGA PDLSAGLLER IFTTPRRYSV
61 PARERDWMVG ARTDHLELAG GLRIPLYRWG SGPTVLLIHG MSGRGSQMAG FTAPLVAAGF
121 SVVAFDAPGH GAAPGRRFSL PEYAQVVLQI AAHLGPLAGA VAHSVGAAAA TVAMGAGAEI
181 DRLVYFAPLE DMADQLLRLA RFLGFSTRVA GRTQHRLETR LGVPMEALRG RDIARTMTRR
241 LLVFHDRYDR MVPFSDGATL VRHWPGARLI TTEGLGHARI LRDPDALERT VRFFAGPMSG
301 HESS
SEQDB ID: 3101377GHC
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKWSDLDHDS CPVARAMSVV GDRWTLLILR EAFLGTRRFD GFQDRLGITR HLLAERLKKL
61 EALGLMHRTP YQERPLRHDY RLTPAGRAFG PVMLMLVDWA TENLPSDLPP PVRVVSQADG
121 HEVDPVVVDR ATGTPLTYET MRLRRT
SEQDB ID: 3101377GHD
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTWRCILSTL PCMLCWGAVR EEDMSVVAYE KDGRIARITL NRPEVMNAIN DELPGALAAA
61 VAQADADPGV HVMVLSGAGR AFCAGYDLTY YAEGNGAGEV TQPMPWDPIK DYRFMWANTQ
121 HFMSLWRAAK PVVCKVHGFA VAGGSDIALC ADMTIMAEDA QIGYMPSRVW GCPTTAMWVY
181 RLGAERAKRM LFTGDKITGR QAADMGLVLE AVPAEHLDDR VEELAARMAT VPINQLAMQK
241 LVINQAIEQT GLMQTQRLAT IFDGITRHSP EGIHFKERAE AVGWKQAVDE RDQGTWDWTA
301 NAEIPKGNR
SEQDB ID: 3101377GHE
Reference:
3101377
Name: CAIB/BAIF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLNGTRIIEI EGLGPGPFAA MLLADLGADV ITVHRKGGAV TPGMPERSLL DRGKRSIALD
61 LKDAADIATA RALIASADAL IEGFRPGVME KLGLGPADCH ALNPALVYGR MTGWGQDGPL
121 SHAAGHDLNY ISLSGALWYG SAPGDAPQTP ATLVGDIGGG AMYLVTGLLA GLLNARATGQ
181 GTVVDAAIYD GSAHMMNLLM SLGQTGSLSE TRGHSLLDGP HWSRTYACAD GGHVTVQCLE
241 PKFYALFLDR LGLSDDPEFQ QQFAPKLWPT LTTRLAALFA TQPRDHWADL FLGTDACVAP
301 VLSPHEAQHH PMNAARRTWC EIDGALQAAP APRFAGRDWR PKPSPARGEN TAEILAELAK
361 AAKP
SEQDB ID: 3101377GHF
Reference:
3101377
Name: uroporphyrinogen decarboxylase, Class: EC4.1.1.37
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemE
Sequence:
1 MAETKKLLRV LAGEVLDTPP IWMMRQAGRY LPEYRATRAQ AGDFLSLCYN PELAAEVTLQ
61 PIRRYGFDAA ILFADILLVP QALGADLWFE TGEGPRLSTI GAQADFDRLK PVDAIHETLS
121 PIYETVRILT RELPSETALI GFAGAPWTVA TYMIAGRGTP DQGPAHALRE GNPALFDALI
181 ARLTAATIEY LSAQIEAGAE VVKIFDSWAG SLKGEAFTKY ALEPCREITQ ALKARHPGIP
241 VIGFPREAGQ GYVGFAKATG VDCVALDNSV TPDWAAAHVQ VDGCVQGNLA SSHMVTGGQA
301 LVDETRRIVE AFSKGPHIFN LGHGITPDAD PENVQLMIDT VRKG
SEQDB ID: 3101377GHG
Reference:
3101377
Name: porphobilinogen deaminase, Class: EC4.3.1.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemC
Sequence:
1 MKIALPSPAS PLKIGTRGSP LALAQAYETR HRLGAAFDLP EDAFEIVVIS TTGDNRAMIE
61 ADRPLKEIGN KGLFTKEIEE AMLRGDIDIA VHSTKDMPVE QPAGLVLDTF LPREDVRDAF
121 ISPGHSAIRD LPLGAVVGTS SLRRKAQLLN RRPDLKVVEF RGNVQTRLRK LSEGVAECTF
181 LAMAGIRRLN MAEVPATAIS PDDMLPAIAQ GAIGIERRMD DTRAAEMLTA IHHGETGQRL
241 AAERALLAAL DGSCETPIAG LAELDGTTLR LRGEVLRPDG SEAITLDRSG DVADGPALGT
301 EMARELLAQA GPGFFDWRG
SEQDB ID: 3101377GHH
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERRLTTILA ADLSGYSRLM AADEEGTVTR LRHLFADIVR PDLSREGGRL IKTMGDGMLV
61 EFASPVAALR SAVAILQQVA RDQVETAPDT RMLFRVGIHL GDVISDGDDI LGDAVNIAAR
121 LESLATPGGI CISRSVHDQV RGKVDAELIE LGPQPVKNIP DPVEVWRVGA EGIACAAEKP
181 AVRAELPAVV ILPFDNMSAD PEQDFLADGI VEDVTTELSR FRTLTVIARN SAFAYKGSHK
241 DVRQIAEELG VRYVVEGSVR RAGDRLRATA QLIDARTGAH VWADRWDRTM ADLFDLQDEL
301 TAAILSGVEP ELGAHERNLA RRKPTDSLTA WEMCQKGYSE FTRYTDEGYS QAHAYYTRAI
361 AADPDFALPH ALLARLAWVK VITGRTRDPA AEISTGLDHA AQAIERDDRL EIGYVALGVL
421 LAITGREQDA ADALDKAEAL NPNNAVLHFG RCHACLFMQR LDCDRLERAA RTALRLNPKD
481 PMAWGFWFQL GNAFTFRDID AAEPEALAAY ETACRFANAD YFVFMATALK HAKLGNRDKA
541 AHYLAQARER YPALTAEFWR RAFRFPIWSR WVAADEPNIQ LLIDLGLPQK
SEQDB ID: 3101377GHJ
Reference:
3101377
Name: fatty acid desaturase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPGKAYLGT EEIRPLAERS DAMGLWLVAH CWGTIALAVA LFGLWPNPLT FALAVVVIGS
61 RQLGLAILMH EAAHNALFRN RRLNDIVGEW LCGRPILAEL AAYRHYHLTH HRFTQTDKDP
121 DLVLSSKFPT SHASMQRKFA RDLTGRTGIK QLIGQIMMSF RLAGDDEAIK AAASDFAQSF
181 KAPQLWKSLP VFVGIALLIS LAGDWWWGLA FWILPYLTWF QFVLRIRNIA EHGATEQSED
241 PFQNVRTTYA GPIARLLVAP YWVNYHLEHH MIMHVPCYNL PRMHALLLDK GLGGRMKTAP
301 SYGAALREAG WRSA
SEQDB ID: 3101377GHK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQRLTARPR PRPRARIGAR CESLYPARAN PLSRRSNIMT RRRTGWTLVT AALLLPGMAM
61 GFQAFNRFEV YPVSKGVFEV VNRHGSAPKD FWCGAGDYAI RVLRTSATQR IYLVRPVGPA
121 ATVKGRKGVQ FSLQPPEGAD TTPGYSVSVK KVGDNMNASL AQNYCYDRLT DDFWLRP
SEQDB ID: 3101377GHL
Reference:
3101377
Name: coproporphyrinogen III oxidase, Class: EC1.3.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemF
Sequence:
1 MFETEKSTAS AWFRDLRDQI VAAFEGLEDS HAEGPFSEMA PGRFEVTETT RQSDDGSDAG
61 GGLMSVMRGG RVFEKVGVNI STVYGTLGER AQAAMAARKG IPGMADDPRF WASGISLVAH
121 MQNPHVPAVH MNTRMFWTPH AWWFGGGSDL NPCIEYAEDT AHFHATQRAH LDPHGSEHYP
181 RLKAWADEYF YIPHRKRARG VGGIFMDDLC TGDWQADFAL TQDIGRAFLP AYLSLVERRR
241 VQPFDEAEKE AQLVHRGLYA EYNLVYDRGT KFGLETGHDA NAVLMSLPPL AKWI
SEQDB ID: 3101377GHM
Reference:
3101377
Name: 7-alpha-hydroxysteroid dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFSIAGKTA IVTGAANGIG LAIARQFASA GANVMFADMD EKGLEEQLGD LAEDGNIRYF
61 AGDLRERLTV ANLLSATIDA FDQIDILVNG ARQVIPTDPL DTEDDSVRVA LNQNLFPAYR
121 LSQAVAKRMI KQAGENGEGQ AGAIINLTSV AARRTHPDLL AYSVSTAALD QMTRAMAVAL
181 APQRIRVNAI AIGSVMSASL QAALKDNREF RQDIERHTPL GRVAAANELV LTAQYLASDA
241 SSFMTGQILT VDGGRTLLDP VAAPAH
SEQDB ID: 3101377GHN
Reference:
3101377
Name: methyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSRLELALA SGLDLSAPLS VLGPTPDHDL SALPPDTEVV QPYRPWHDHF AARGFHTVAQ
61 SDAPCADAVV ILPRAKAQAR AMVAEACRRA SGRVVVDGAK TDGVDSLLKD IRKRVAVEGP
121 LSKAHGKIFW FHAEAADFSD WVPPADQQVA GFRTAPGVFS ADGVDPASAL LLEALPQKPG
181 KVIADLGAGW GYLSAGILSR EGVRALHLVE ADHAALDCAR ANIDDPRASF HWADVLSWQA
241 PERLDCVVMN PPFHTGRAAE PALGQGFITA AARNLTGSGQ LWMVANRHLP YEAALNERFQ
301 QVAEVAGDNR FKVFHASRPR R
SEQDB ID: 3101377GHP
Reference:
3101377
Name: ATP-dependent clp protease, Isotype: ClpS, Subunit: adaptor protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: clpS
Sequence:
1 MTAQLHMMSD KHDQDNDASV LLQTRPRTKR PPLYKVLLLN DDYTPMEFVV HVLERFFGMN
61 HAQAFEIMLT VHKKGVAVVG VFSHEIAETK VSLVMDFARR HQHPLQCTME KED
SEQDB ID: 3101377GHQ
Reference:
3101377
Name: hydrolase, Isotype: haloacid delahogenase-like family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEKRKQTRQM VQNLTTVGFD ADDTLWHNER FFQMTQDHFA GLLADFAEAD HLMERLLAAE
61 RRNIRHYGYG VKGFTLSMIE TAIEVTEDRV PAAVIRQLIE AGQEMLAHPI ELLPHARAAV
121 EAVAQTHRVL LITKGDLIDQ ERKLAQSGLG DLFHGVEIVS EKTAQTYETV FERHGEGAGR
181 AMMVGNSMRS DVLAPILAGA WGVYVPHGLE WEIEKADPPE DRTRFHSLPD LGALADLVGQ
241 LG
SEQDB ID: 3101377GHR
Reference:
3101377
Name: D-Ala-D-Ala carboxypeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIVQVRQKMP ARLGLILFFA IWMIAALSGV ARAAPYAAMV IDARTGEVLH ATNADTRLHP
61 ASLTKMMTLY IAFEAVRNGE LTMDTQVRID PFAAKEPPSK LGLRAGQKIA FRYLVRAAAV
121 KSANDAATSI GIAISGSEAA FARRMNRTAK ALGMTRTTFK NAHGLTESGH LSTARDMTTL
181 GRHLLYDYPQ YYNLFSRRET SAGIKTVANT NRRLLDAYQG ADGIKTGYTQ AAGFNLVASA
241 KRGDERVIAT VFGGKSSTAR NAKVAELLDL GFRKAPSRAP IRRPDMPLYA GEVGESSKTV
301 RVAGAPTSSL RPNQRPGGAI ATVVAQAVAE TARQDEDRIQ AGINAAMAQA DIVAQTTDTP
361 DPGLRPSMRP ENLILAASQP DEVEPEPERE VVTRLSTSGG HLWGINIGRY PNRYDAEKVL
421 LRTALAEVST LDGSLRKVHQ SSKGFEATFQ GMTRDQADRA CRRLQARNVT CFMIGPS
SEQDB ID: 3101377GHT
Reference:
3101377
Name: LamB/YcsF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRVDLNADM GESFGPWKMG DDDSLLKIIT SANIACGFHA GDPDVMAKTM ALAAENGVGI
61 GAHPGFPDLQ GFGRRNMKVP HDSLRNLVRY QLGAALGMAR AVGTQVRHLK LHGALANMCS
121 VDQDMARACY QGALDVDPDI IIMVLAVTKQ EQAVRELGCK WVGEIFADRA YNDDGTLVDR
181 ALPGAVIHDP DLAGPRMLKM VRAGAIITES GKHLETSVDT ICLHGDGPTA VQIARSVRAC
241 LEEGGVSVTA FER
SEQDB ID: 3101377GHU
Reference:
3101377
Name: urea amidolyase-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLIVHRIGP ACTIQDQGRE GYLDQGLSRS GAADLRALYE GAALLRQKPD LAALEMAGMG
61 GEFEATAPLR IALTGAPMQA SIDGSPVAWN ASHALAKGQR LSIGAVLRGG YGYLHLGGGI
121 ASEPFLGSRS AHLAARVGRA VAVGDTLENG PDKGEAGMKI AAEDRFGGGA LRVVASFQTA
181 LFDGETLARF EATEFRRGPR ANRMGMQLDS DGPGFAAKGQ LNILSEVISP GDIQMTGTGN
241 PFILLPECQT TGGYPRIATV LPCDLPRAAQ TPPGGAVRFH FVSLEEAVAV HAAWLKDLAR
301 LSSRVEPLVR DPHDIPDLLS YQLISGVVSA TD
SEQDB ID: 3101377GHV
Reference:
3101377
Name: allophanate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRSDPFPLI RSVGLDGMLV TFADTMTERS NRAALAFRGA LHEAGWEGVV ESSTSLASAY
61 LRFDPLCLSH AEVQARLAAL LAERDWYAAP LPSGRKLWRV PTVYGTDLAP QLEDAAAAAG
121 LDVDEAVRRL GQSRVRVLTI GFAPGQPYLG PLAPEFDIPR LQQLTPMVPE GALVCAIRQL
181 IVFAGPTPTG WRHIGQTAFR CFRPGMEPTF ALNPGDEMVF EPIERVELDH IRAHNEDGTG
241 GAKVEEIAA
SEQDB ID: 3101377GHW
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQQALAFVAR HGRLGLMVGL GAGLALPGLA AVMRPWIPQL VALLLFLTAF RIGPVDAAGS
61 LADLTRTARR VLVLQLALPI LFLLGLRLLG LPVTPLALVL ALVLAAPSVT GSANFTILLA
121 QDPAPALRLL ILGTALLPLT AIPVFWLLPA FGDPAEVFGA ALRLLGVILL AAGCGFALRH
181 WGARQLSDLN RRAMDGLTVI ALAVIVIALM SAVRPAMTER PAELAFWLLA AFAINLGGQT
241 LCYLTLRATG GADPVPTSIV AGNRNFALFF VALPSEVTEP LLIFLGCYQF PMYLTPTLMR
301 RLYDPV
SEQDB ID: 3101377GHX
Reference:
3101377
Name: TRAP dicarboxylate family transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MENLSVIILF LFVLFTLLGT GVWVGLALMG VAWVGMELFT TRPVGDVMLT TIWSASSSWT
61 LTALPMFIWM GEILYRTRLS EDMFKGLSPW MAPLPGGLVH TNIVGCTVFA AVSGSSAATL
121 TTVGKMSIPE LRKRKYPERM IIGTLAGAAT LGLMIPPSLT LIVYGVTINE SITKLFFAGI
181 LPGLVLAAMF MGYVAIYSRL GKDWSPNPEP KLSFADKIRN SRFLAPVITL ILVVIGSMYL
241 GYATATEAAA FGVIGSLLLA LGQGSLSWKT FAESLMGATR TSAMIALILA GAAFLSLSMG
301 FTGLPRGLAN LIAAWDLSRF ELLMVLLVFY VILGCFLDGI SSVVLTMAVV EPMIRDAGID
361 LIWFGIFIVV VVEMAQITPP IGFNLFVLQG MTDHEMSYIA RAAIPMFLIM VLMVFVLILF
421 PDLATWLPDN LRAGPGQ
SEQDB ID: 3101377GHY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALLRGLRSG LDLLYLIAGV LAAMCLVAIL GLIVVQMLAR WTGEVFPGAP DYAGYAMAAA
61 SFLAFANALN RGSHIRVSIL LNAVPDGLRR WIEVWCFGIG TAVMWYFVWY AYRFVYWSWK
121 FNDISQGQDR TPLWIPQSAM LLGAVILAIA LTDHLIHVIF KGDHRITRDL ADQSHGE
SEQDB ID: 3101377GJ
Reference:
3101377
Name: MePro demethylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRDPLLQPF QLKHLTLKNR IMTTAHEPAY PEDGMPKQRY AAYHAERARA GVALAMTAGS
61 AAVSRDSPPV FNNILAYKDE VVPWIRQLTD ACHDHGCAVM IQLTHLGRRT GWNKGEWLPS
121 VSSSRHREPA HRAFPKLAED WDIARIISDF ADAAERMKEG GMDGIELQVY GHLLDQFWSP
181 LTNDLDGPYG GQTLESRMKM PLDVLRAVRA RVGDDFIVGL RYTADEAAEG GIGPEEGIEI
241 SKRLADTGMV DFLNVIRGRI HTDPAMTDVI PVQGMKSAPH LDFAGEVKKA TGMPTFHAAR
301 IPDVATARHA VASGLLDMVG MTRAHMADPH IVQKIVEGRE DDIRPCVGAT YCLDRIYQAG
361 EALCIHNPAT GRELTMPHTI PSAQTRKRVV VVGAGPAGLE AARVAAERGH HVTVFEAQPD
421 PGGQVRLTAQ NPRRREMIGI IDWRMAQCAA RDVEFRFNTW AEAADVTALN PDVVIVATGG
481 LPNTELFETG RENNLVVSAW DLISGDVKPA QNVLIYDESG DHPALMAAEV AANAGAKVEV
541 MTPDRMFAPD IMGMNLVPYM RALQDKDTTF TVTRRLLDVT RDGNQLRARI GTDYSSFTKD
601 QTYDQVVVNY GTMPMADLYF ELRPLSRNGG EVDYDALIAG NPQTVETNLD GAFQLFRIGD
661 AVSARNTHAA IYDALRLMKD I
SEQDB ID: 3101377GJA
Reference:
3101377
Name: bacterial extracellular solute-binding protein, Isotype: family 7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKLTTLLAA TALTSVAALS ATAETWDMPL AYSGSNFHSV TAAEFGNCVT TGTGGEIEIV
61 THPSGSLFKG ADIKRAVQTG QAPIGERLLS GHQNENALFG FDSVPFLATS FDDADKLWKA
121 AKEPLSALLA EQNLTLLYSV PWPPQGLYFK NEVNAVADMK GIKFRSYNNA TSRLAELTGM
181 LPVTIEAAEI SQAFATGVAD SMISSGSTGY DRKVWESLNY FYEVDAWLPR NYVFVNSDVW
241 SGVSDQNKNV IQACAGLAEY AGNWRSKEYT GFTLQGLRDG GMTVGPASDQ LVGELKEIGV
301 TMTSEWLEAA GDQGKAIVDA FKAD
SEQDB ID: 3101377GJB
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDTAKTIAI IGAGIVGVST AIWLQRDGHQ VVLIDRAGPA EGTSYGNGGV LASCSIVPVT
61 TPGLIAKAPR MLFSPNEPLF LRWGYLPRLA PWLLRYLRRA NARDATQTAA AMAPIVGDSL
121 ADHLALAQGT GAEKWVVPSD YLFIYNDRAH FQGDAFGWNL RRQNGFVWDE MEAEEFRGYD
181 PIFSSDLRFA VRLKDHGRIT DPGQYVKDLA AHVVASGGQL IQADVEDIAR ENGRVTGVRA
241 GGRTIPCDAA VIATGVWSGP LARKLGLEVP LEAERGYHIE FWNPNFMPKS PVMVAARKFV
301 ATPMEGRLRL AGVVEFGGLD AGPSRAPIEL LKRSAAAVFP GLKADEVTEW LGHRPAPADS
361 IPVIGELPHL KGAFTGFGHH HVGLTGGPKT GRILAQLIAG RQPNIDLSVY SPARYTKAGQ
421 N
SEQDB ID: 3101377GJC
Reference:
3101377
Name: muconate cycloisomerase, Isotype: I, Class: EC5.5.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: catB
Sequence:
1 MMGDLEQKII AMDLWHLALP VVSARDHGIG RVEGSCEIVV LRLVAEGGAE GFGEASPWAV
61 FTGTPEASYA ALDRYLRPLV IGRRVGDRVA IMDEAARAVA HCTEAKAALD SALLDLAGRI
121 SNLPVWALLG GKCRDTIPLS CSIANPDFDA DIALMERLRA DGVGLIKLKT GFRDHAFDIM
181 RLELIARDFP EFRVRVDYNQ GLEIDEAVPR VLDVAQFQPD FIEQPVRAHH FELMARLRGL
241 TDVPLLADES VYGPEDMVRA AHEGICDGVS IKIMKSGGLT RAQTVARIAA AHGLMAYGGD
301 MFEAGLAHLA GTHMIAATPE ITLGCEFYQA SYFLNEDILE TPFRVEAGQV IVPDGPGLGA
361 RADPEKLEHY AVRRSG
SEQDB ID: 3101377GJD
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRFFRHYQA FHAIIETGTV TGAAERLGVS QPAISNLLAQ LERRTRLKLF ERNRGRLLPT
61 PEAMVLFDEI DTVIRGLGQV SQAVVDLQNQ KAGQLQVATN HAMAFGFMPE QIARFAADKP
121 NLTVAFQSQY SAKIQDWVMA GLFEIGICEQ PVRTDGLDWV PFFFEIQCAV PADSPLARHE
181 ELTPILLDDV PFIVMGADHM VTRRAREAFH REGANLRIRC QTDLFRNALN LVKQGLGVTL
241 VDPFTLSSDD RSGYVLRRFA PRILLDVIIV TARGRPISAI GAQFLEQVSA SMTTLATAAP
301 DPAEP
SEQDB ID: 3101377GJE
Reference:
3101377
Name: transglycosylase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPTPLLLA IFIVVNSTTV ATGQNTDPEL PRPDQISEYY QASAASWPAI PHIALLAIVA
61 AEDRRFFERP LQHSTITKQI GQWYPQPGIE KHQRVVLSFA VGEVLSHDEV LNWYANEVFL
121 GQACFGLSNA SMVYFGKSAA DLNLEEIAYL AALPKAPSLF HPVRSRDRAI ERRDFILMEM
181 RNAGFISGDE TDRAMQTALN VHDPLVRCEP LE
SEQDB ID: 3101377GJF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHVQGRLHGA VSFVAGYETG VSHFHQYEIS AFNGSVA
SEQDB ID: 3101377GJG
Reference:
3101377
Name: multi-Cu oxidase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQRREFLRSL GATTAIAAGV QNLGVSMAMA RTGEPLRDLP ELRSQNGHVK TKLIIENGKF
61 QVGDRVLTVP AYRFEHMDTG SLPGPTLRIR PGDHVEWDLV NKMTPTGIPD GASDEQKNMF
121 QQLEYTNVHV HGMQVSPKPG ADNVYQVLRP FCPPEPYSYH VPGPDTGLPQ PAGMFWYHPH
181 KHGSTAHQAW EGLSGAIIVE GDIDEVPEIK NIRERVIVLN GLLVNPAGEV PRAAIVPNAG
241 FSPFSPIPSQ PTDIILTMNG QLRPVIDIRP GEVQRWRFLN AAPHRFFWLN LDGHDFYQIG
301 QDGIPFAAPR PVKRILMAPG NRAEFLVKGG EVGRYDLHAD QYEQGHPGGA RPGWVIGTME
361 VNGTIRDDPL PSKLVEPPKM PDLPIANRRE IRFKGEISGN EEKGEYVGSH DHSGGMRPPV
421 QFYLDGKIFE LNRIDQKVLA GTVEEWTLIN EDVFQHPFHI HVNPFQVIDI NGQPTYDDSW
481 WDVIALPSKG RLTVRMYFRP DVDGKTVYHC HILPHEDNGM MANLYIFPPG TDMNNPPAIP
541 DTPEPTGMGP CKV
SEQDB ID: 3101377GJH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQYLKSAFA AATAALIAQV AAAETKYQPW QQDGVAKRPY IFTQQHNVGK ETDDEAGGQL
61 IRLGYPLQVQ LPGNPALWTF QPDASLNVEY LGRTMVYSPN RIEGTESIQV FDLALTPDAA
121 SGTQGYFTFT TEELPPSLDK VVPGGIYVVH FEVIEPSK
SEQDB ID: 3101377GJJ
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANEFNLTKY RDIDNFDDLV EYHRGLRASN DYLNSNSFAD ITIDLAINIG RILTGREPLL
61 DPTPPHHSQS IEFAQGVSNT AIAAGIATLG AKAGAFGTIS WGAEAVVAAI NSGAGDHATA
121 YANSLDVLDA AQKGHVSLDQ EAYDFLAKEL AKATFPDKVS IVEDKLEIAA EKLGLNSTTL
181 SDAINNCFVA GTNIYMWPSD PSLQPNEYGA YDTETVHKKV WKKRIENISS GDIVVSYDTE
241 GNLKPGKVKQ TFQNHTTDLI RLRRGDEYDD LFTTPGHLFL GESGNFFRIG DQLQFVGEEV
301 SLVDFHGNIV TAKRSKVHPG EIENSPPKDD SITQVGWRTY NFEVEDFHTY IADGNRVHND
361 SFYSVKDVPA NRTVSEVIGT LGKVIGYRDV LDGNNNPVNA GSVDEEGNTV SSPGAGGHVG
421 HDGSPSAWGG GEQPVILDLN NDGVEISFDQ KISFDWDQDG YRERTSWVSA DDGFLVIDLN
481 ADGSRGSGDG QIDQARELAF TLWGNEDDTD LQGLRRAFDD NNDGVLNTSD SVWNELRIWQ
541 DLDQDGETDN GELRSLADWG ITQINLGYDD GSDYDHTDDD ITVYGNTLHG LASYTRNGEA
601 IEGGVGDVSL AASEQGWRRV ETSSGFTVEL ENGETYQYQK LDETGPDDID LVSAWLDGAE
661 GNDNANLLDA SGHTRSVSVN GGAGADTVLG GQADDILIGG EGSDSLDGGA GNDLVIFDAD
721 DVAIRGGDGF DSALYSGTSS ITFDLAANGF ERASGGDASD TLIAEYTSTS VWLYGRAGQD
781 LLRGGGADDL LSGGEGNDTL YAQVGDDLVI GGIGQDQLHG EDGDDYLLGG DGHDNLDGGN
841 GDDQLFGGDN EDTLWGRDGD DTLYGDAAND VLRGEAGDDV LFGGDHNDRL MGGDGDDFLN
901 GGEGRDTIYG GAGDDVAYGG AEYDLFFDGD GDDVYKGGGG NDIFELQTHS GQNVVQGGLG
961 TDTLRLNGHR DMWQWESVHK TSQVQTGTVE GGPDGGQPIY STAHQGKGQY IFYSGDAVVH
1021 VQDVEQVVFL GNSGKTFWSH KALEDEEAFS LNYVASYDDL IANDEVDNTS SNWTIGRDHW
1081 VNYGQAENRE VTFNPLQYLA ANPSVYQLHG FDLTAATRHY IDTGHDAGLS RGDFDAEQYL
1141 KNYSDMRSQF GADLSAATRH YIEHGRAAGR TDDAVSGAMT DAEFAAWLTS LADQDEVIYL
1201 VEADAGEDNE ATFYFADRDD LEIADPNAVI FGHAIVANNT SAGSGNDTIY ADSTSTGHWL
1261 YLNQQESTSG SEDTLRGGDG ADVIYAGADD DSVFGDSGSD SIAGQDGDDI LRGQDGSDSI
1321 TGGDGQDTLY GHDGADVLVG GLGNDYVRGG NGADRQWGGE GDDSVYGDAG ADTLFGENGN
1381 DTLKGHDGSD VLLGGEGNDT LDGMNGSDRL YGEAGNDSLV GDLGDDRLEG NVGDDTLSGG
1441 SGNDYLDGGE GDDSLSGGNA QDALFGGEGA DTLDGGGDND ILYGNDGTDS LDGGSANDAL
1501 HGGAGADTLN GGDGIDAASY AGSSEAVYVR LDGTNASNFT GDAVGDVFSG IENLFGSEHD
1561 DQLYGDASHN VLWGADGNDT LNGLAGNDDL MGGDGADRLI GDSGIDRLSG ESGADSLYGG
1621 ADRDFLFGGA DDDHLEGGAG NDSLSGGDGN DSIYVGADDA NVSGNDTADG GAGDDLIIGS
1681 NGYDHLKGGD GNDTLNGGDD LATAERDTLE GGTGNDSITS GQVVIPDADR QIYGDYMYGG
1741 GGDDTITGGK GDDVIYTGGP TDNLVGFDHA SGGDGDDLIH GSNGKDLLFG DAGNDTLTGG
1801 NDGITADADT LDGGDGNDSL TSGQTLAPEA GREGLGDHLF GQAGDDTLTG GAANDVLKGG
1861 SGNDELWGGD GNDSIYSGAA EANQSGNDTA DGGAGDDLLV GSNGYDHLKG GDGNDTLNGG
1921 DDLATAERDT LEGGAGNDSI TSGQVETPDA DRQAFGDRMY GGGGDDTITG GKGDDVIYTS
1981 GPTENLVGFD HASGGDGDDQ IFGSNGKDLL HGDAGNDTLT GGDDGITADA DTLYGGDGND
2041 HLTSGQTDAP EAGREALGDH FYGEAGNDTL TGGKANDYLE GGTGADSFVF LSDFGQDTIA
2101 DFSTSQSGET IDLSGVSQIT SFSDLTTNHL TQSGSDALIS DGAGNTITLT GINMADLTAD
2161 DFLF
SEQDB ID: 3101377GJK
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo7
Sequence:
1 METLERQRGL RPDHGGPGHR KRRAQDDHDR RDLSQGTPHC VEPVREKGGR GRQIGRTKGG
61 MNTKLHAVAD AKGRPIGFFM SAGQVSDYTG AAALLGSLPK AGWLLADRGY DADWFREALK
121 DKGIKVCIPG RKSRKKAVKY DKRRYKRRNR IEIMFGRLKD WRRVATRYDR CAETFFSAIM
181 LAATVLFWL
SEQDB ID: 3101377GJL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLYFDHWTKV PADIWRWPNF SPEEIACRST GKVGIDPQAM DKLQALRDRL GAPLMLNSAY
61 RSPEHNRAEG GAPASEHLKA RAFDVSMINH DPAEFEAAAR AVGFTGFGFY RRNNFIHVDI
121 GPAREWGNRW FDRVPHGAPL RPAPRFSPPP KLRPETLAED RGARGTALGA GGGVALIGAL
181 GNVVGDLNPT AQAIAFGGAI VLAASLAYLI RDKIREWA
SEQDB ID: 3101377GJM
Reference:
3101377
Name: Ac-Orn deacetylase, Class: EC3.5.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argE-2
Sequence:
1 MSLSLEVLER LVAFETVSDR PNLDMIAYVE DFLRTRGFRV HRIADPEEAK AGLFAEIGPS
61 VDGGLLLSAH SDVVPVEGQS WCVPPFKLTR QGDKLYGRGT TDMKGFLAEM LALADVVHRR
121 DLHAPLKLLI SYDEEIGCVG ISRMKDRLRP LLGRPELAIV GEPTEMQVAI SHKGKRSYRA
181 DFRGEAGHSA LAPRFVNALH LAVDFVTKLR QMQDEFRQDG NFNGDYDVPY TTLHVGQLHG
241 GEALNLVPDK ATLLFEFRHL AEDDPEVIEA RIQQAADAVK GNYADVAHIS LDALAGYPGL
301 SVAVSEPLVS RVRSWCDGNI SHVAFGTEAG VLSELGIQTV VCGPGSMAEQ GHKPDEFISE
361 HQLAACSNML RKGAEEMLYC A
SEQDB ID: 3101377GJN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRLTLRQLE YLVAVGETGS IVRAADRLNV SSPSISSAIT QLEEKLAISL FVRQHAQGLS
61 LTRGGQRVFE QARLVLSGAR EIANIAADIS ESTRGPLAIG CLLTFAQLVL PRMRRGFESG
121 FPDVRIVQKE LNQAEIFNAL QRSEIDVALT YDMDIPTDLK FIGLVRLHPF ALLHAEHELA
181 NKPAISIEDL AGLPMILLDL PISADYFLSL FETSQQKPRI VERTRDMAVM RSMVGNAFGY
241 SIANVRPQSD MSPDGSPLVY VPISGPVRSL RMGLLTTSGA EKSRTVSAFI DYAREQVRSG
301 ALRAIGGEAL T
SEQDB ID: 3101377GJP
Reference:
3101377
Name: Rieske 2Fe-2S domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYLRTKLQD LAALPVDRPM GMPGAFYTSQ EQFEHEARTV LRTGWHCLGR VDEIPEPGDF
61 FTAQLLNEPL LVVRGDDQSV RVMANVCRHR GMPLAEGRGN TKRFVCSYHA WAYGRDGALL
121 RAPRMENAGF DAKSCKLPEH AVQLWNGFIY VNLTPDALPF EHPELDAMLA PYETEDFHLV
181 HVAEEDWQTN WKCLVENFME GYHLSVVHPQ TLHGYTPSGL SRKLVSGDGF TSYAANYPDN
241 ITPRGEGALG LSEPERKRSS LFAKFPTQVA SQAASLLVSL CIFPVNASLI RVKWTMSVYR
301 DNLDHDTIQQ RISLWEEVNR EDREKLERMQ VALRSAHAVE GPLAEDDFEG TIRDFQTWLA
361 SQDAAVEVA
SEQDB ID: 3101377GJQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFSLVARCA KTGMFGMAIS SSSPAVAARC AFARAGVGAV ASQNVTDPSL GPKTLDLMER
61 GASAEAAVRQ IAGEATHIAY RQLLAIDGQG TTAIHSGQNV LGNWNEAQGK DVASGGNLLA
121 HDGVPAAIVL AFETSEGHLG DRLIAAMRAG LSAGGEAGPV HSAGMMLVDK VSWPVADLRC
181 DWTEDCPIEA VATAWDIYKP QLNDYVRRAL DPGAAPSYGV PGDA
SEQDB ID: 3101377GJR
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAHTRIRTFN TADTYPEQAL DNDLCQVVVT RGGRTVWMRG QCPQNLDDAK NIDSHDPAEQ
61 THKVMQNIKQ LIEEAGGEMA HLVKVVVYIT DVRHREAVYR TMGEYIKGVH PVSTGLVVQA
121 LARPEWLVEI DATAVIPD
SEQDB ID: 3101377GJT
Reference:
3101377
Name: Rieske 2Fe-2S domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKDHIDPIA ALRENTSVPF ERARAMPTEV YTEQSFVDAE LEYIFRKDWY CVGRADALSA
61 PGDYVACELA GQPIVVLRDR DGDLRAMSNV CLHRMSTLLH GRGNAKTIVC PYHAWTYNLD
121 GKLRGAPAMT KNEGFCKDQY ALPQVRCEEW LGWVFVCLDP EATPVAAQLA EVAAKIEGYD
181 MANYSEAFYE EHVWDTNWKV LAENFMESYH LPVCHAGTIG GLSRLEDMIC PPGHAAFNYH
241 TILKDESLRI AMAHPSNDRL EGDARRTTYL LALYPSLMIT LTPGYFWYLS LHPKGPGQVH
301 IRFGGGMSND FAADPDAQDN FTALKTLLDE VNVEDRGCTE KVYRGLCSEV ATPGHLSHLE
361 RPNYDFAKYL MARIDAGSSS
SEQDB ID: 3101377GJU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGTRKGDAME KFDTVVIGAG QAGIATSEHL RALGIDHVVL ERGRIAERWR SERWDSLVAN
61 GPAWHDRFPG MAFSCDGDVF ADKECVARYF EDYAKMIDAP VRTGVTVERA RPHADRAGFL
121 VETSQGTFDA RNLICATGPF QKPAIPPIIP ETSDLTQMHS TAYRNPDALP DGAVLVIGGG
181 SSGSQIAAEL HDAGRKVFFS IGPHDRPPRR YRGRDNVWWL GVLGIWNMDT PAPGTEHVTI
241 AVSGAHGGKT VDFRLLAERG ITLLGMSSGY EDGVLHIAND LKTNLDAGDA NMLSLLEAAD
301 AYIKRTGIDL PPEPEAWVIP DDPDCVSNPV RALDLSENNI GTVIWATGFQ FDYDWLEADT
361 LDDRGSPIHQ RGISAVPGLY FVGLPWQSRR GSSFIWGVWH DAKFIADQIA IQENYLAYRP
421 TASS
SEQDB ID: 3101377GJV
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTADTKRPLT LRDVSEASGV SEMTVSRVLR NRGDVSDATR ARVLAAAKEL GYVPNKIAGA
61 LASNRVNLVA VIIPSLSNMV FPEVLTGINQ VLEDTELQPV VGVTDYLPEK EEKVLYEMLS
121 WRPSGVIIAG LEHSEAARAM LDAAGIPVVE IMDSDGKPVD AMVGISHRRA GREMAQAILK
181 AGYRRIGFMG TKMPLDYRAR KRFEGFTEVL GKNGVEIEDR EFYSGGSALA KGREMTQAML
241 ERSPDLDFLY YSNDMIAAGG LLYLLEQGID IPGQIGLAGF NNVELLQGLP RKLATMDACR
301 LEIGRKAAEI IAKRLEDPEA EIETRITLEP KISYGDTLKR R
SEQDB ID: 3101377GJW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALQRLDNRA ARALFLDRHG LAEQPSGPAR GVALLELITR LGFVQLDSIN TVARAHDLIL
61 FSRRPSYRPP DLKRLYEQDR ALFEHWTHDA AVIPMAFYPH WHMRFQRDAE MLRARWKNWR
121 RDGFEGKFAA VLDHIRDHGP VGSSDVGKDE EKTSGGWWDW HPSKTALEYL WRSGALTVIG
181 RDGFQKRYDL TERVIEDHLR PGALDHDPEA TVDWLCNAAL DRLGFATTGE LAAFWDSSSP
241 AETRNWAAGA EARGEVETIE ITCADGSLRK VLARPDVLDQ AIAVPPAPGR IRVLSPFDPA
301 LRDRKRAERL FGFHYRIEVF VPEPKRVYGY YVFPLLEGDR LIGRIDMKAH RDCGELRVRA
361 LWPERGLRWS PARTRRLEAE LDRIRRLAGV EQVILAKDWL RDPL
SEQDB ID: 3101377GJX
Reference:
3101377
Name: HpcH/HpaI aldolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAPKNPFKQ ALAEGRRQIG CWMSFAEPIV AEVMGTCGFD WLVVDGEHAP NDIRSIRDQL
61 TALAASPSHP VVRVPVGEDW IIKQALDAGA QTVLVPIVES ADQARQLVRA CRYPPTGVRG
121 VGATAARASR FGSVSEYIQT ADQEICLLVQ VENRAGMAAL DEILTVEGVD GVFIGPADLS
181 TDMGFQGNSA APEVRAVVAD AMARIRAAGK APGILGTNEE ATQAYLEMGA QFLAVGLDVM
241 LLAQTARSLS ARWKTA
SEQDB ID: 3101377GJY
Reference:
3101377
Name: pyridoxal-dependent decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKWDEFADWG RRVADWTQDY HLTVGERPVR ARTEPGAILN ALPATPPETP EAMEDIFRDF
61 EDIVMPGITH WQHPRFFAYF NSNASAPSVL AEFLASAIAP QCMLWQTSPA ATEMETRMMD
121 WLRQALDLPE GFAGVIQDSA SSATLAAVLT LREKALNWQG NRQGLFGQKP LRIYCSSEVH
181 TSVDRAIWVA GIGQDNLVRI PIKGDWRGMD PDALEAAIKA DLAAGRHPAG LILCVGGTGT
241 GATDPVDRCL DVAEKYGLYT HVDAAWAGSA MICPEFRHYW SGIARADSIV FNPHKWLGVQ
301 FDCSAHFLKN PDDLVRTLAI QPEYLKTHGR DGIINYSEWS VPLGRRFRAL KLWFLMRSYG
361 MEGLRQRLRN HIAWSGALHD RLTAEPDFEM VTPPMWSLWT FRYRRDGADL DALNLRLVNA
421 INDDGRIYLT QTRVDGALVI RFQAGQFETT EEDVGMAFDV ITEIARALP
SEQDB ID: 3101377GK
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEQTPLRSR RSRRASGKAG RSAEPGQNLH LRVPYITRKI PTYDLLGEES LDKIEATADR
61 ILAEIGIELR DDEESMRLYK RAGAQVTELR ADAWNIRFEP GMLREILKTA PARFTQHARN
121 PANNVDIGGD AMVFAPAYGS PFVMDMDNGR RYGTIQDFQN LIKLGQSSPW LHHSGGTICE
181 PTDIPVNKRH LDMVYSHMRY SDRAFLGSIT APERAADSVE MCRILFGADF VDQNCVIMGN
241 FNTTSPLVID GVTAAGIRTY AAAGQGSIHL PFLLGGAVSP LTMAGAVAQC LAESMASSAL
301 TQLVRPGAPA ILAGFLSSMS LRSGSPTFGT PEPALGSLVM GQLARRLNMP LRCAGNFSTS
361 KAPDGQAMQQ AMMSMMSAVQ GGANYILHSA GFVDGLLSMS YEKFVMDTDM CGALHSYLAG
421 IEVNEDTLGF DALAQNGPGE HLFGTDHTLR HYETAYWDSG LNDDQTHETW SEQGSADYAI
481 RANKRWKDIL NTYEAPVMDD ATDEALREFI DRKKASMPDA WY
SEQDB ID: 3101377GKA
Reference:
3101377
Name: extradiol ring-cleavage dioxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVPAPNLYP PFNIVRLSHV EYRVRDLAAS RAFYVDILGL QVTHEESGRL YLRAMEERGH
61 HCIVLVEADT ADVGVLGFKL YDEPDLERAE RFFAEKSLPT AWVERPHMGR TLRTRDPWGI
121 PLEFYVRMDR LPPIHQKYRL YNGVKPLRID HFNMFSADVD ASVAFYGEMG FRVTEYTEDD
181 ESGRLWAAWM HRKGGVHDVA FTNGLGPRLH HTAFWVPTPL NIIDLLDLMS TSGYVANIER
241 GPGRHGISNA FFLYVRDPDG HRIEIYCSDY QTVDPDLEPI RWSLTDPQRQ TLWGAPAPKS
301 WFEEGSTFES AEPVPSQLKA QPIIAP
SEQDB ID: 3101377GKB
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTIRRCGKG RFRRNWPMSS DLPNTSRSLP IALLRARERV MRPVRGILMD VGITEQQWRV
61 LRVLEEEGPQ DPTRIAEGAC LLLPSLTRIL QKLEEKQLIA RQPDPGDGRK QIVSITPGGT
121 QIIRDNQGAS QAVFEGIQAQ MGPERYEMLL DLLNELYRDK AD
SEQDB ID: 3101377GKC
Reference:
3101377
Name: gentisate 1,2-dioxygenase, Class: EC1.13.11.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gtdA-1
Sequence:
1 MSEQLGTLEE LPQDYREQMA AAGVAPLWPM MRNVLPHDAP RPVTRAGHWS FPALRPLLLR
61 AGELTPVEKA ERRVLVLSDP GRGTGAMQAT ATIYLGLQLL LPGESAPAHR HTPSAVRIVV
121 EGLGGYTVVD GERLPMEPGD LVLTPGGEWH DHGHDGDEPV IWLDALDLPL FVQLEGSYAI
181 EGELQAQRNR PDASQVEYSA AGLAPSRRPG RGARRYPMMR YPWAATETAL RQMAAYGEGI
241 AELDYINPET GEDVLTALGF TAMMLTAGQV ETPPLRSCSS AFHVIAGSGR SEIDGQVIEW
301 GPKDTFTAPV FARIRHEAES EAFMVRIHDR PLQEKLGYYE ERAR
SEQDB ID: 3101377GKD
Reference:
3101377
Name: fumarylacetoacetate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDSLFTLSP IPGIPVRGES ATYPIGRIFC VGRNYAAHAA EMGNEVDREA PFYFTKSAAN
61 AILTGATVPY PPGTENFHYE MELAFAIGKP VFRASRAEAW DAVYAYGCAL DMTRRDQQIR
121 ERDKKRPWDL GKDVENAAVF APLTRVADWS PEDDKRIHLE VNGAIKQDAT LAELIWKIDE
181 IVSHLSGYYH LRPGDLVMTG TPAGVGPVVA GDVITGGIDG LDPIALTLGP AE
SEQDB ID: 3101377GKE
Reference:
3101377
Name: monooxygenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAERILIAG GGIGGLAAAL GLARQGRRVL VLEKAAQLGE IGAGIQLGPN AFHAFDYLGV
61 GDAARALAVY IDNLRLMDAI TGVEITRIPL DDPFRARMGN PYAVVHRGDL HGVFLRACQD
121 SPLVELRTSS AVVGYEQDGT SATALLQDGT RETGAALIGA DGLWSKVRAQ MLDDGPPRVS
181 GHTTYRSVIP VEDMPEELRW NAATLWAGPK CHIVHYPLQG WRSFNLVVTY HNDAPDPVAG
241 MPVTADEVRK GFEHVSPVAR QVIDKGQDWK LWVLCDRDPV MTWTEGRVAL LGDAAHPMLQ
301 YFAQGACMAM EDAVRLSALV GEGGEIETLL RRYQDSRRLR TARVQLQSRE IGEHIYHPDG
361 AHAALRNAMM SAKTPEEWYD SIEWLYGGTG LTGAV
SEQDB ID: 3101377GKF
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIILLREGQ REDNMTYRRK ILGLIGGAAV AALATGFSAG TALAQEVTLK LHQFLPAQAN
61 VPKLVLDVWA DGVEKDSGGR IKVERYPSMQ LGGKPPELMD QAIDGVADVV WTVVGYTPGR
121 FPSTEVFELP FMMTNARAVS HAYWEMFEKH MKDDEFKDVH ILGTWVHGPG MIHTADPVET
181 PADLQGMKIR GGSRSVNSLL TKLGATPVGM PVPAVPEGLS KGVIDGTTIP WEVTTALKVP
241 ELVENHTEFE GRALYTLTFV LAMNKAKYDS LPDDLKAAVD KNSGLEFSVF AGGTQADADG
301 PARQVAEDLG NNIITIDAAG VEEWRALAQP IYDEWLADMD SKGKDGKALL EEAQMLIEKY
361 TPQYSN
SEQDB ID: 3101377GKG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHKLMTGLAR TLAIVGGIVL SLLILLTCAS ILGRLLNGFF HGDFMQSAAP GLADWAIGIG
61 IGPVNGDFEL VEAGVAFAIF CFLPLCQITA GHASVDILAN TFSRRVNRFL RMVTEVIFAA
121 VLVLIAWKLF DGMMSKRAYA ETTFLLQFPI WWAYALSFVA AFAAALVGVY MGAVRSYECF
181 SGRILVWDGV EATQ
SEQDB ID: 3101377GKH
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALEIGIAS FPALMVLIFL RVPIGLAMFL VGLVGLVLVT DGTQVAFARL KNETYTTFSS
61 YSLTIVPMFL LMGHFATLGG MSTALFKAAE GWLGHRKGGI AMASIGACAG FGAICGSSLA
121 TAATMGRVAL PELRQYGYAG GFSTATLAAG GTLGILIPPS VVLVIYAILT EQNIAKLFLA
181 AFIPGIMAAL GYVLAISVYV RLYPDSAGTR PAVPYGERFA ALLQVWPVLL VFGLVVGGIY
241 LGWFTPTEGA AVGALGTGVI AWLNGGLTRT SLAESFLVTA RSTAMIFFIV LGAAFYNGFL
301 ALTQVPQELS NFVVSQGYSP WVVLALILAF YLVFGCLMDS LSMILLTIPI FFPVISAMDF
361 DLVSLATMQA DAAMEVLKAG VPEAMSAETL AGIKDAIASG AELTREQMKE LGIRVTRGMA
421 NRAEAEHVAI WFGILVLIVV EVGLITPPVG MNLFIINAMD RTTRMADTYK AVMFFVGSDI
481 VRVIILVAFP AITLFLLPG
SEQDB ID: 3101377GKJ
Reference:
3101377
Name: feruloyl-CoA synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fcs
Sequence:
1 MTPIARTTDW LHRWAAETPD AVFLAERSGA GWREQSYGET LGRVRALAAG LLACGLEPGD
61 RILVVSGNSV DHGTLALAAQ YVGLVIVPVA EQYALIPGAL KQLHHIIGLI DPAMVYAEDG
121 AQFAAALAME ETAGRRIVVG RNLAPGMTLL GELERESGDI SGAADAVGPD TVAKILMTSG
181 STSHPKGVLT TQGMLCANQA QYARALPFLT ERPPRLVDWL PWNHVFGGSN NFNQMLAFGG
241 ALYIDGGKPA PALIGKTFEN NRLMNGTIAY NVPVGFAQLR DEMRRDPALK HHFFADLDML
301 FYAGASLSAD VWRDLSEMAA EVRDTQPLIT TCWGMTETAP ACIFQHVPAN LPGIIGVPLT
361 GVTAKLVPAD GDRFELRVAG PNVFAGYFRD PEKTAAAFDD EGYFCTGDAV AMVDARDLSQ
421 GLRFEGRLAE DYKLATGIWV RASALRLEVL AALAPLAADV VLTGEGAAEI GLLILPTPAL
481 ATGLAAEGGV LRPGAMADEI ADRLSRLNAD RGSSARIARA LILSDPPSMA EGEVTAKGNL
541 NFRKLLERRA EIVSRLYGDD DEARIDVH
SEQDB ID: 3101377GKK
Reference:
3101377
Name: benzoate-CoA ligase, Class: EC6.2.1.25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: badA-1
Sequence:
1 MSANAAHYFV DRHVEEGRGA RPAFREAAGA RRRQSYGELA RDSGAVAGAL ARAGIPREAR
61 AAMLVLDQLE FPALFWGCLK AGVVPVPLNT LLATSVYEVI LNDSRASILF VSEELWPVVQ
121 PAALASPHLT RIVVIGAAPD GTQSYADFVQ GADILPAVEV SPDDVAFWLY SSGSTGQPKG
181 VRHVHASLKA TADSYGARVL GIEPDDLVYS AAKLFFAYGL GNGMTFPMSV GAETILFNGR
241 PTPDGVRDII ATEKPTVFCG VPTLYAAMVA MLDREGVPDV TLRRCISAGE ALPEEIGRSW
301 HRQWGVDILD GVGSTEMLHI FLSNAPGDVV YGTSGRPVPG YEVRLVDESG ADVGPGGLGE
361 LLVRGASAAD GYWNKRDKSR ATFEGEWTRT GDKYELTSDG RYVYCGRTDD MFKVSGIWLS
421 PFEVEQALVA HPAVLEAAVV AARDADGLEK PKAFIVLKAA ETEGLADTLR DFVKEKVGKW
481 KYPRWIEFVE DLPKTATGKI QRFKLREGG
SEQDB ID: 3101377GKL
Reference:
3101377
Name: hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDWSANPADK LRIDEVGLEY ACHGPAPGDA PTLVLLHEGL GCVAMWRDFP AQLAARTGLG
61 VLVYSRQGYG GSDPVTRPRP LDFQTREALE VLPAILDAAG IRQAILLGHS DGATIAAIHA
121 GSVAGHRIRG VILEAPHFFT EPGGLASITE ARAAYESGDL KQKLARYHAD PDGAFLGWND
181 AWLDPGFATW NVAEVIDYIR VPILAIQGRQ DQYGTLAQIE EIESRAYCPV DTLILDCRHE
241 PHRECADRVL DEVAEFCSRL LRIEAADVIP A
SEQDB ID: 3101377GKM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELPPLSDPY MPGLTARPPE DLFEALHQSV PNQLRPDSLA ACPAWIAGWR LLELGYFWEA
61 HEVWEPVWMA LPPNDAARHA VRAAIQLANA ALKLRMGRQG AAQRLCSLAR EAAGRANGAA
121 APEGWHDLFR THLEAVEGRF EVLQNNA
SEQDB ID: 3101377GKN
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQRIDFQTD PSRYRHWRVA YDGEIANLYM DVDEQGGLFP GYELKLNSYD LGVDIELADI
61 VQRMRFEHPE VKVVVMQSGK DRVFCAGANI RMLGGASHAH KVNFCKFTNE TRNTYEAAEA
121 DSGQKYIAAV KGACAGGGYE LALACNYIML TNDSSSSVAL PEVPLLAVLP GTGGLTRVTD
181 KRKVRRDLAD VFCSVEEGVR GQRAVDWRLV DEIAPNSKFD EVVQERAREF ASASVKPSGL
241 TGIALTPLDR RFAEDGSVTY STVEVVVERE AGRATLTISG PTDAAPDTVD ALQAQGAEAW
301 ILRAARELDD AILHLRLNER RIGTLVIQTQ GDGAAVAAHE ALLLENRDHW LANEILQHWK
361 RVLKRVDMTS RSLVAIVEHG SCFAGPLAEL LWAVDRSYMM LEEFEGDNRP LAAITLSPGN
421 FGTYPMGNDL SRLATRFLGT PEAVEAARAR IGEALEAEEA EKLGLVTYVL DDIDWEDEVR
481 VFLEERASFS PDAMTGMEAN LRFAGPETME TRIFGRLTAW QNWIFQRPNA VGPDGALQRY
541 GTGVRGDYDM ERV
SEQDB ID: 3101377GKP
Reference:
3101377
Name: benzoyl-CoA oxygenase, Subunit: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: boxB
Sequence:
1 MLDLINVSYD TQIPNNVGLS QDKKVLKALE KWHPGYINWW NDLIPQNFQE SLVYLRTAVS
61 VDPKGWAKFD YVKMPEYRWG VLLAPQVENR TIPCGEHYGQ PAWQEVPGEY RNLLKRLIVI
121 QGDTEPASVE QQRLLALTAP SLYDMRNLFQ VNVEEGRHLW AMVYLLHKYF GRDGREEADD
181 LLRRQSGSEE APRMLGAFNE ETPDWLSFFM FTYFTDRDGK MQLESLAQSG FDPLSRTCRF
241 MLTEEAHHMF VGETGVGRTI ERTCQVMKEN GIDDPYDTGR IRDLGVIDLP LIQKKLNLHY
301 TLSLDLFGQE VSTNAANAFN AGIKGRYMEN RLTDDHQLQQ DTYTVWDFED GKAVQKQVAA
361 LTAINMRLRD DYTKDAAGGV GRWNKIIEKH GVDFQLSLPH EAFHRKIGVF ADKHFDPSGQ
421 PVSGAEYDAG LPKWLPTHAD GDFIQSLMKP CYEPGQYARW IAPPKVGIDN RPGDFEYVKL
481 HMA
SEQDB ID: 3101377GKQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEGVTLLFA EPGLIGQHEE PTMQIDRSKP ETPHLHALSG QISTLQGPCV GCSDCVGLCK
61 ALIDTLVVPD LVLTRKRETS
SEQDB ID: 3101377GKR
Reference:
3101377
Name: benzoyl-CoA oxygenase, Subunit: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: boxA
Sequence:
1 MTCPEQAIEH DDMNVVVDVE KCKFCMDCIP VCPTGSIDNW RVVDTPYSLE DQYGWMDLPP
61 QEDVAGDEAG LEALDDAMAA LLAEAHKGAG GKSRAPATAS KPTINLYTLG KPAEARVTGN
121 YRLTAESSDS DVRHIILDFG GQPFPVLEGQ SIGIIPPGTD EAGNPHLPRL YSVSSPRDGE
181 RPNFNNLSLT VKREPHGICS NHVCDLKPGD TVRVTGPFGA TFLMPSDPAA HLLMICTGTG
241 SAPFRAFTMR RQRESPKLRN SLTLVFGARR PQELPYFGPL AKVPEQFMAK HFAFSRQDGA
301 PKHYVQDRLR AEADRVGELL ADPLTHVYVC GLKAMEQGVE EAFKDIARAQ GIDWTGLRDR
361 MRDEGRYHVE TY
SEQDB ID: 3101377GKT
Reference:
3101377
Name: DNA-binding/shikimate kinase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEITNFRGE TTPNSARDQA EAEVADLIAR VGERVRAARQ RRGIPRRVLS EISGVSPRYL
61 AQLEAGEGNI SIGLLQRVAT ALDHRIEWLV GEDDPWSSDA MRVADLYRVA GMDTRAEVLR
121 LLSPAPSLAA RAGRICLVGL RGAGKSTLGQ RLGAALGLPF VELNDEIEDQ AGMPVAEVMA
181 LYGQEGYRKL EAQAVARIVA THDALVLAVA GGIVAEPETY KTLLAHFHTV WLRASPIEHM
241 ERVRAQGDER PMAGNPEAME ELRSILTSRE ALYGRAEAQI DTSGQSVEAS LSQLTRLVRE
301 RGYLD
SEQDB ID: 3101377GKU
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRILCAGTV SILALASAAA ADIKIAHVYG KTGPFEAYAK QSHDGLMLGL EYATGGTMEI
61 DGEKIVVIEK DTQLKPENGK ALLEEAYGDD EVDLAVGPVS SGVALAMLPV AEEYEKVLIV
121 EPAVADSITG ANWNRYIFRT GRNSSQDAVS NAIALAGENV HIATLAQDYA FGRDGIAAFK
181 EALEGAGSGI VHEEYVPTDT TDFTAAAERI FNAMKDLDGE KRLFIIWAGG GNPMGKIQAM
241 DPSRFGIEIA TGGNILAAMA AYKDFPGMQG ATYYYYEIPQ NPVNDWLVKT HQDRFGTPPD
301 FFTAGGMAAG IAVVEAIKKA GSTDTEALIS AMEGMEWETP KGKMMFRPED HQAMQSMYHF
361 KIKVDPNVDW AIPELVRELT IDDLPIPIRN N
SEQDB ID: 3101377GKV
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSPILATEG LTVRFGGHVA VDAVSCAFHT GELTAIVGPN GAGKTTYFNL ISGQIPASAG
61 RVLLRGRDIS GQSVSQRTRA GIGRAFQLTN LFPNLSVLEN VRLVVQSKAG QGMNLWSMAS
121 RHAELTEAAE AILTRVRLID NRDQTVSELS HGNQRKLEVA LLIALDPTVY MFDEPTAGMS
181 VDEAPVVLDL IAELKEQRDR TILLVEHKMD VIRTLADRII VLHNGALAAD GDPATVMASD
241 VVQEAYMGRE LEDV
SEQDB ID: 3101377GKW
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDPILRLEG VYTNIAQYHI LQGVDLEVPR GAVTMLLGRN GVGKTTTLRS IIGHWRAHQG
61 RILLDGQDIT RMPTPAIARA GVGFVPEDMG IFANLTVEEN MVLAAVSGPI DSARLDWVFQ
121 AFPPLKTFWK SEAGNLSGGQ KQMLSIARAM VEERRLYLID EPTKGLAPAI VSTMARALRE
181 LKAQGASILL VEQNFSVARA LGDSACVMDD GRIIWSGEMR ELVTDAALQE RLMGLSMEAH
SEQDB ID: 3101377GKX
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSMAPEHAPT MARLSLAQRL APWMPVLLVP LLVLAGLLAI PNTSSWLTLT VSGLAMGMMI
61 FLMASGLTLV FGLMDVINFG HGAFVSVGAF VGVSVLLLLG GMTGAPSLAL NLAAMGLAVI
121 GAMLATGAMG WAFEKVIVEP VYGHHLKQIL VTMGGLIVVE QLIIVLWGPE EIYISRPEAL
181 KGAITFAGAA LEKYRLVAVG LGLVVFAAMR WTLRRTKIGL IVRAGVENGE MVQALGYRLR
241 LVFVGVFIAG SALAGLGGVM WGLYQEVVSA HMGNQAMILI FIVVIIGGLG SVEGCFIGAL
301 LVGLMQNYVA FLEPKVALIS NIGLMVAILM WRPMGMIPVV KAK
SEQDB ID: 3101377GKY
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIKAVLSGDM PRSLVLALIL GLILVCLALA PFLFPGVRTV DTAARICVFI VLVASYDLLL
61 GYGGIVSFAH TMFFGIGAYG VALALTHLGR GFDAILVGAG ASALLAAALA FVIGLFSLRV
121 RAIFFAMITL AVASAVAVLV SQLSGLTGGE DGLTFKTPRA LGPAFKFGDE LFGVKLNGKL
181 LSYYVVFIGS LVLFLLMLRV VNSPFGRVLQ AIRENDFRAE AIGYRVVYYR VAATCLSAAV
241 AALAGSLYAI WLRYVGPDTT LSMEIMIDIL LMVVIGGMGT MYGAVIGATL LVLAQNYLQN
301 LMGVAGSLVD GVPVLPQLLD ADRWLLWLGV LFILSVYFFP TGVVGRLRRG
SEQDB ID: 3101377GL
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLAPKPTGS ESAWLDAAYE LLTESGVEAV KIMPLAQKLG VSRTGFYWYF KDRETLLEAM
61 IQRWEEKNTG NLVARAEAYA ESIVEAMFNL FDCWLDDGLF DARLDLAIRN WARNDPGLHQ
121 RLDQADQARQ DAVAGMFLRF GYPENQARVR SLTVMYTQVG YISMQIEEHP DIRIANMPDY
181 VEVFTGVTPD QADVDRFLSR HAAKWRAAAN QM
SEQDB ID: 3101377GLA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVEDPDSFYA SLRPVMDFPE LSEPSRFTPL PDDWVLGTAD IVDSTGEIAR GRYKTVNMVG
61 AAVISAMINA MGDQRFPYVF GGDGAGFAVP GDKAERVRTV LADLRRWAAE EFDIALRAAL
121 VPVATIRAAR RDVRVARYAA SQGVDYAMFS GRGLAWAEAR MKAGEFVVDP APPGAQPDLT
181 GLSCRWSNMR ARNGQIVSLV IAPTETASER DFADLARRVM ATADGLERSG HPVPPGGPGV
241 TWPPPGLTLD AHVSREGRSL ALHKMKLLGQ NLLIWLLFRT GLRLGDFRPD HYARMVSRNA
301 DYRKFDDGLK MTLDCDAETR ARIETILEDA RRRGKIRYGL FAQDEAMMTC FVPSAMRDDH
361 VHFIDGAAGG YAAAAERIRK A
SEQDB ID: 3101377GLB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQAGLIILCL AYVLSQFFRA FLAVLTADLA RDIGAQPDDL AFASGLWFLT FAAMQIPVGW
61 ALDRIGPRRT AAALLLVGGG GGAALFALAT TPVHISAAMV LIGVGCSPVL MASYFIFARE
121 YPPAQFATLA AVMLGVGSVG NLVASYPTAL AVELMGWRAT LAGLAAISAA VAAGIWLSVR
181 DPEMVQHDTK GSLLDLLKQP LLWTILPLML VAYAPAAALR GLWAGPYLRD VFDLDTGQIG
241 QATLIMGAAM IAGTFAYGPL DRVLGSRKWV VFGGNLGGVL ALALLVLWID LGVWSSVALL
301 AAIGFLGASF PVIMAHGRAF IPTHLVGRGV TLLNLFGIGG VGLMQFVTGR LHESYAAAGP
361 AAPYTAIVTF FAVSLVVGLV IYLFSRDSLA
SEQDB ID: 3101377GLC
Reference:
3101377
Name: Asp semialdehyde dehydrogenase, Class: EC1.2.1.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: asd
Sequence:
1 MGYRVVVAGA TGNVGREMLN ILAERQFPVD EIAALASRKS LGTEVSFGDK TIKTQDLDTF
61 DFTGWDMALF AIGSDATKVY APKAAAAGCV VIDNSSLYRY DPDIPLIVPE CNPQAVHGYA
121 KKNIIANPNC STAQMVVALK PLHDRATIKR VVVSTYQSVS GAGKDGMDEL WEQTKAVYNP
181 TSDVPPKKFQ KEIAFNVIPH IDVFMEDGST KEEWKMVAET KKIVDPSIKV TATCVRVPVF
241 VGHSESINIE FEEFLDEDEA RDILRESPGI MVIDKREPGG YVTPKECVGD FATFISRIRQ
301 DSTVENGLNL WCVSDNLRKG AALNAVQIAE LLGREVLKKG
SEQDB ID: 3101377GLD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPACRYPIAS DQGFLMRFFV PFVVALFSTV TPGLAGSYST ETTVTAATVF PQGAAVRRQL
61 SMELPAGRHD LTLLGIPVDG PELETLDIQV AGARVLARKF RHSDVPWHDY RSAAYLAARE
121 RVRAVEQQIL AVRDAAETAR LRARAADQAS GFLARLGENE GLAGAEPETL RAITRMIAEE
181 ALTSARAAQD AEIEARGIER KLTALEEELQ AAMQDLAAVS GATEDRGVLT LDLELEAEGT
241 VEIDIGYLTL EAGWQPVTDL YLTTGASPQV DIRLGARVTQ DTGDDWSEIA LSISTLRPMD
301 RASPSTLWPL LRRIVEPERE ERMFKGAMAE AVVEAPVIVD EFQPAYDVPG TGQTYTLSAP
361 VTLISGVEDT FLEIGRVSEA AEVFAQAAAQ HDSHAFRMAR FRNSTGRTIL PSDSGRRFVD
421 GVMVALEATP QIVEGEEVTL GFGPIYGLTV ERAVLNRSTG DTGIITRSNA QNERVEIAVR
481 NLTGESWPLR VFDQVPYSEQ EDLVIDWTAT PKPDEQDVDR LRGILAWKME LAPEAERIIR
541 LDTAINWPEG MELR
SEQDB ID: 3101377GLE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLREIMLKL DESTLRAAMR LAQDSDVTLG QFVRVAVEAE IQRRSRNAKT PNRADERLLA
61 SLRTLLAADF AHARSWADLS CRLSRQGFAL REAGGGLALH RHPSGERLCK ASELGHSYAT
121 LMRRFDAPFP GHSHRYLADR MLGRPDRNDI TAAPSPRAS
SEQDB ID: 3101377GLF
Reference:
3101377
Name: carbonic anhydrase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLARPLPNY LVQRYHGWKA TTYTENQVWY RRLASEGQRP RAMVISCCDS RVHVTSIFGA
61 DQGEFFIHRN VANLVPPYLP DGDHHGTSAA VEYAVTVLKV AHLIVLGHSQ CGGVRGCLDM
121 CKGHAPQLEA KESFVGRWMD ILKPKYDHVA KIEDEDEQVR QLEKHAVVAS LENLMTFPFI
181 ASAVEEGSLS LHGLWTDIGE GGLQCYEPGD ERFVPV
SEQDB ID: 3101377GLG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVVEVITLVQ SESVRLDPDR LGGLYRQLGD AGAEDVVCRA IEELAVRLTN CERLWRARDW
61 TALRKCARSL IAISEQIGMV ALARVARQVT DAIDNGDYVA TSAVLYRLIR VGEKSLTEVW
121 DQQDLSI
SEQDB ID: 3101377GLH
Reference:
3101377
Name: cytosol aminopeptidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLERSQMPLS FAPADADALP LHVIEKTALD GWLQGQPASV AAWVRASGFT GAIGQALPVP
61 GETGAPVMAL AGYGSAETRA RKRFVLAAAA ESLPEGIWRI GSGLPEAQAE AECFGWLMTG
121 YAFDRYKGQS PAKARLVAPA GVDAARIEAM ATSEALTRDL INTPAQDMGP DALQAAVEAL
181 AAEFGATCTA IVGDDLLSHN FPMIHAVGRA AARAPRLIEL RRGTVGPKLT LVGKGVCFDT
241 GGLNLKPGNS MALMKKDMGG AANVLGLARM IMALDLPVQL RVLIPAVENA VSGNAFRPGD
301 ILTSRKGLTV EINNTDAEGR LVLADALALA DEGAPDLVIS MATLTGAARV AVGPDLAPFY
361 SDDDSAAQAL AEAALGAADP VWRMPFHTPY EEMIEPGIAD LDNAPGGGFA GSITAALFLR
421 RFVVAPYMHF DIYGWQPVKA PGRPKGGVGQ GPRALLAALP RMLDL
SEQDB ID: 3101377GLJ
Reference:
3101377
Name: NLP/P60 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAHAILRPV VDLLRCPEGP RDRQVLLGAR VELLERQENW ARIRADKDGY EGWLPADVLG
61 ADAVPTHWVS APSTHAYARA DLKSPDLMAL SFGSRVAVHA VSGRFAETAQ GHIPVQHLTP
121 MGQRLTDPVA VAELFLGTPY LWGGDSRWGI DCSGLVQAAL LACGHPCPGD SGPQSRAVGT
181 LMPPGTQPRR GDLLFWTGHV ALVADAERIL HANANDMAVA YEPTAAAIAR IIAQGEGPVT
241 AHRRPAIHA
SEQDB ID: 3101377GLK
Reference:
3101377
Name: thiosulfate sulfurtransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQDDPKTLVS TDWLAAHLKD PDLRILDGSW HLPHLGRDPK AEYEAAHIPG ARFFDIDDIS
61 DHRSDLPHMV PPVEKFMSRL RAMGVGDGHQ VVVYDSLGLQ SAARVWWLFK LMGQDNIAVL
121 DGGLPKWQAE GHPIEDLPPV IRDRHMTVRV QNHLLRDVTQ VSAAAKLHDH EIVDARSAGR
181 FAGTDPEPRP GLRGGHIPGS KNVPFGTLLN KNGTMKSPAD CRAVFEAAGV DLKKPVITTC
241 GSGVTAAILS LALQRMGKTD HSLYDGSWAE WGAFPTLPVA TGEN
SEQDB ID: 3101377GLL
Reference:
3101377
Name: aromatic AA aminotransferase, Class: EC2.6.1.57
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: tyrB
Sequence:
1 MFENLKAQPA DKILALMQMY KDDPRSDKID LGVGVYKNAE GVTPVMRAVK AAEKIVWEQQ
61 ESKSYTGLIG DPAYSDAMIK LILGDAVQRA NVGAAATPGG TGACRQAFEL IKMASPEARV
121 FVSDPTWPNH ISILNYLGMT MVPYRYFDAD SRGVDFEGML VDLGQARAGD VVLLHGCCHN
181 PTGANLNLSQ WREVVKLINA KGLVAMIDIA YQGFGDGLEE DAQGTRLVAS SVKECLIAAS
241 CSKNFGVYRE RTGLLMAVSQ DSGQTALNQA TLAFLNRQNY SFPPDHGARV VTTILNDDAL
301 RADWMAELEE IRLSMLGLRQ QLADELQRLS GSDRFSFIAQ HRGMFSRIGA APELVEKLRT
361 EFGIYMVGDS RMNIAGLNAQ TVPILAKAII DAGI
SEQDB ID: 3101377GLM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTARKIHRWN GALFAAFLLL HFIAHLSGLW GVDAYNATQD ALRLIYRNPV TEPLVLASAL
61 VQMGLGLKLL IARIRRGLRE PWARAQVISG GVVLYFMTEH LIALMLARWV DGLDTNFYWP
121 ASVMSGAPFT WYFIPYYSLG VIALFVHLGC ALRLILLRRG ARGQARVAFW GIVLAGIIIA
181 WLIVAMLLGA FYDITLPPEW LAYLRKFVPG FTS
SEQDB ID: 3101377GLN
Reference:
3101377
Name: Rrf2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHTEGLEWA AHACSLLAAL PPDTSLPARL LAEFFDLPEP YLAKQMQKLS AAGIVETRRG
61 PRGGYALARA PAEISLLQMV QAIDGETRHF TCTELRRCGP SGVEDSQYLR PCGIARSMWR
121 AEAAWRRELA GVTLADLLRM GMQDTPPEQA AKALAWFQEK LSQDKPTQEQ TP
SEQDB ID: 3101377GLP
Reference:
3101377
Name: ammonium transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: amt-2
Sequence:
1 MTLIKTLLPA AAVIALPTLG LAQEATADIT PPNEEIGYIF TTFMFLVSGF LVMWMAAGFT
61 MLEAGLVRQK NVTMQLTKNI ALFSLAALMY YLIGYNLMYP GDGWSIDGVL GAFSPAAMEP
121 VGLADTETDL TYASVGSDFY FQLMFCATTA SIVSGTLAER IKLWPFLVFV LVLTGLIYPI
181 QASWKWGGGF LDAAGFLDFA GSTVVHSVGG WAALAGALIL GPRLGKYKDG RVIPFMGSNL
241 PLATLGTFIL WLGWFGFNGG SQLYMDTAGN VADISRIFAN TNTAAAGGAV AALLLTQLLY
301 KKVDLTMVLN GALAGLVSIT AEPLTPGLGS ATLIGAVGGV IVVFAVPFLD RLKIDDVVGA
361 IPVHLMAGVW GTLAVCLTNG DANLGTQLYA IVVVGLFTFV VSGAVWFILK MVMGIRVSEE
421 EEINGLDMAE LGMEAYPEFS KS
SEQDB ID: 3101377GLQ
Reference:
3101377
Name: nitrogen regulatory protein, Subunit: P-II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnB-2
Sequence:
1 MKLIIATIKP FKLDEVREAL TEAGIRGMMV TEIKGFGTQS GHTEIYRGAE YTVNFVPKIK
61 LELVVADQIA EQIADTIART ARTGKIGDGK IFVLDVEQAL RVRTGETDDD AL
SEQDB ID: 3101377GLR
Reference:
3101377
Name: penicillin-binding protein, Isotype: 1A family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFALAERQRQ RRFRNEIPAN SAPESRKVAH FLHIDVRLPK NASAIKGKDR EKHTSTVSPA
61 RAMVRQRQRP GRVGMTDSKR RKSQLVADKR YPTKGKPAAA GAKRKPAPKR KAPAPKRPRR
121 GGPLGWLSRF FGWIFGLIWG FAWRIGMIVA LLVGLAVALV YSTLPDVTAL LDGRARGSVT
181 LLDREGDVFA WRGDQFGGVI TTDTVSPHLK NAVVATEDKR FYYHVGLSPR GIASAVRINL
241 REGRGPLSGH GGSTITQQTA KLLCLGVPFD PEEWKSEAAY EADCRRGSLW RKVKEAVYSL
301 AMEAKYSKDE ILNIYLNRAF LGAGARGFEA ASQRYFGKSS AQVDPAEAAM LAGLLVAPTR
361 YAPTNSLKRS QERARVVVAL MEEQGYLTAA QADGARANPA RLSEAAAAQA GGYFADWVMS
421 ELPDYFGGNT TEDVIIRTTL DQRIQTSAEE AMRFVFQEKV RDGSKAQAAI VVMSADGAVR
481 AMVGGRDTKV TGAFNRATQA ARQTGSSFKP FVYATALELG HSPLDTVVDE PYCINIAGSG
541 QWCPKNYTNK HYGRVTLAQA LKDSLNVPAV KVAEAMGLDN VRRVASDFGI DSDLAAGPAL
601 ALGASESSLI EMTGAYAGIL NGGSSVEPYG LTELHLQGEN EVLMATGTGI GERVINKDAA
661 AQLIWMMEKV ISEGSGRRAA LPGRPAAGKT GTTQAARDAW FIGFTADYVT GVWMGYDDNT
721 PLKGVTGGGL PAEIWHETMI RVHEGTPVNP LPMQAPRQPK PIAQPKPQQP KGGLGQAVDQ
781 LLRDLFGN
SEQDB ID: 3101377GLT
Reference:
3101377
Name: toluene tolerance family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSKLFSRRS FVTTACAGLA ALALPLPAVA LTEARAASLV NEVVTEINRV IASGKSENAM
61 IRDFEKLFVR YGDVPIMARY ALGPDARTAS PAQLKSFTQA FQGYISRKYG KRFREFIGGE
121 VTVKTARKIK AGYEVKTSVK LQGQAPFDVT FLVSDKSGKD KFFNMFIEGV NLLLTERTEI
181 GSMLDRRKGD LNALIRDLAS AG
SEQDB ID: 3101377GLU
Reference:
3101377
Name: VacJ lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKLSLSIFR FSLVAISALL SACAGQSPDS NAGGRVHDPY ENTNRAIHNF NRGVDKALFR
61 PAAKGYVTVV PRPMVNSFNM FAENLSLPGQ AVDYLLQGKP KEMGTTLFRF VVNSTVGFAG
121 LADPASDFEI PRADTDFGET LHVWGVAEGP YLELPLYGPS TARDAVGVVV NLFTNPVDFA
181 PTRPINNLGL YAEVVRRLGD RGLYSDTVDS ILYGSSDSYA QLRLIYLQNR RFELASDDED
241 AYLGLYTDPY AEPSSAAVTD PYEDPYAE
SEQDB ID: 3101377GLV
Reference:
3101377
Name: type I secretion system ATPase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPRSHLHGA EELRAARRQS RGLYWFVALF SFFANLLMLT GPLYMLQVYD RVLGSRSEQT
61 LVALSLLVVF LYGVMGILDY TRGRVMSRAG ARFQEALDQR VFDAMVRRSA VAQDPVAQTG
121 LADLESVQRF IASPVAMAIF DLPWTPIFLF AIAIFHPWLG LLAVGGGVLL IGITGFNQLF
181 SRKPALNAAI ANNRAGKMGD EIRTEAETIQ SMGMRRAAFD RWRKARVTSL TEGLTAGDVM
241 GRFSTLTKTL RLFLQSAMLG LGAYLVLQGE LTPGAMIAAS ILMGRALAPV EMIVNQWQVV
301 QRSLKGWSSL SELLEKAPPE NKRMDLPKPK AKLDVQSLTV VPPGDTRAQL KTVSFTVQPG
361 QAIGVIGPSG SGKSTLARAL TGVWRPAGGT VRLDGAALDQ YDPDVLGQHI GYLPQRVQLF
421 EGTIAENIAR LSGKPDAKKV VEAATKAAVH DMILQLPDGY DTHITAGGGR LSGGQMQRVG
481 LARALYDDPV IVILDEPNSS LDNDGSVALN KAIRSLKEAG KSVLIMAHRP AAIAECDMLL
541 VLDHGVRMAF GPKDQVLKEM VTNHQVIKGN KTMGGVR
SEQDB ID: 3101377GLW
Reference:
3101377
Name: type I secretion membrane fusion protein, Isotype: HlyD-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAQDFSARK PIILGLLGLI VLVGGFGTWA VLSQIAGAVV AGGRIEVDRN RQVVQHLDGG
61 VVAEILVDEG DTVPEGQTLI RLDSNLLNSQ LLIAEGQLFE LMARRGRLEA ERDSNSEIVF
121 DEDLLEAARA RAEVAELLDG QERLFRARQE SVTKETEQLE KRRGQIGNQI EGIVAQQRSR
181 RSQLELIEQE LVSQQSLLDK GLAQAGRVLS LERTKAELEG ELGELIASQA QQEGRITEID
241 IEILKLGTTQ REDAITQLRD LQYRELEVAE QRRSLLEQLS RLDIKAPVSG IVYGLQVHTP
301 RSVIRPADPV LFLVPQDRPL VIAAKVETIH IDQIHLGQSV TLRFSALDQR LTPELIGTVM
361 QVSADAFVDE ASQASYYRVE IQLNEGEVDK LPPGAILIPG MPVEAFIRTA DQSPIYYLVK
421 PLADYFTKAF RET
SEQDB ID: 3101377GLX
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGYEDKLASL GVTLPNAPAP AANYVPFVKI GNIVYVSGQI SNDETGLITG KLGDDMDVNA
61 GAAAAKRCAI NLLAQVKAAC GGDLDQLVRV VKLTAFVNST PDFTAQPQVI NGASDFLVEA
121 LGEAGRHSRS AVSAAALPLG VAVEIDGIFE VK
SEQDB ID: 3101377GLY
Reference:
3101377
Name: glycerophosphoryl diester phosphodiesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPMLPAALL GQPVAHRGFH DIAAGRPENS RAAIRAAIDA GYGVEIDLQL TRDGQAVVFH
61 DYDMGRLTGR AGPIRQISAA EAAEVALLHG DGEGIPTLAE ILDLAAGRAP LLIELKDQDG
121 GMGPDVGPLE QATADALAGY RGAVAVMSFN PHSIAAMARL APDLPRGLVT SAYDPAEWPL
181 SLATCERLRD IPDYDRVGAS FISHEVEDLS RPRVAELKAR SVPVLCWTVR SAEQEAEARR
241 IADNITFEGY AA
SEQDB ID: 3101377GM
Reference:
3101377
Name: transglycosylase, Isotype: slt family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLNLITRFA AFVWLSVLFA AAPALAKLDP GVSSLCDQAA RSAANRHGVP LDVLRAITRV
61 ETGRRSDGQL APWPWTVNME GTGHWFPTEF AARKFVFERF KSGARSFDVG CFQINYRWHS
121 QGFSSIEEMF DPERNADYAA RFLNDLFGEL GSWSAAAGAY HSRTQSLADA YASRFDRTRA
181 ALGEGPMPNP HRTPDTGGAQ PLFARQEAPP GPARLGSLFA TGSGARPFIS FN
SEQDB ID: 3101377GMA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQAQIEVQI VPSLTGIAAA DWDACACPES ADGGPPHDPF TTHRFLSALE ESGSVGRGTG
61 WQPQYLTAHL DGMMIAAAPM YVKSHSQGEY IFDHSWAHAY ERAGGHYYPK LQITVPFTPA
121 TGRRLLVRPG YEGIGQSALI QGAVQLAANN NVSSLHVTFC TEAEAEAGAE MGLMHRVSQQ
181 FHWVNDGYAD FDGFLAALSS RKRKAIRKER AQAQGFGGQI RELTGGDLRP EHWDAFWRFY
241 QDTGARKWGS PYLTRAFFDI AHQTMADDMV LVLAERDGIP VAGALNFIGR EALFGRYWGC
301 VEHHPCLHFE LCYYRAIDWA IAHGLARVEA GAQGEHKLAR GYLPAVTHSL HWIGDPGFAD
361 AVARYLEAER AAVDEEIEIL TDYGPFRRAQ VEERE
SEQDB ID: 3101377GMB
Reference:
3101377
Name: 4a-hydroxytetrahydrobiopterin dehydratase, Class: EC4.2.1.96
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phhB
Sequence:
1 MSERLSEETR GPLLGPLFAN GWAMVDGRDA IAKTFAFDNF VEAMGWMMRV AIWAEKWNHH
61 PEWSNVYGKV AVVLTTHDVD GLSALDAKLA RKMDSLC
SEQDB ID: 3101377GMC
Reference:
3101377
Name: transcriptional regulator, Isotype: MerR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKILDIGEIA AQSGVPPSTL RYYEEQGLIA PIGRKGLRRQ YGPQTLLRLT LISMGKAAGF
61 SLPEIAQMLG ADGRPDLPRD ELHARADDLG RQIRRLQLLQ ETLRHVADCP APSHLDCPSF
121 QKLMRQAERT AAWGGKHATR
SEQDB ID: 3101377GMD
Reference:
3101377
Name: major facilitator family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKSPVETTPA GAIWRDRRAQ ALLLAATLTI MANATISPAL PGLAREFADH PQVALLTRLL
61 VPAPSLAVVL VAPLVGVLSD RIGRRGLLLW GIALFTLAGS AGLLLPGLES ILASRLILGV
121 AVAAIMTTQT ALIGDYFSGA ARAALTGLQT SARNFGGFAF ISSAGLLAGL SPRLPFLIYA
181 LPLLVLPFIL RSLPRPDPRA ARQGAETLVT DGHPQWRLIL MGLLLFQMIT NMTFFIMPTQ
241 IPFYLDALGH DGAVMTGTVL GLLTLAGGLA ALAYGHLAAR LGVTGIWALG YGAMAMGMAA
301 IGVQAGLPAM LAGAVCIGIG FAWVLPAFVT VMLAVAPARR RGTAGGLLTT SIFLGQVLSP
361 FLSLPIIASI GFDGLYLGAG ALLATISALA LIAGVLQRRR IRARTV
SEQDB ID: 3101377GME
Reference:
3101377
Name: antioxidant, Isotype: AhpC/tsa family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MISVGDTLPD ATFMVFSDKG PETVDLEPKL KGRKVVMFGL PGAFTRGCSM THLPSFIRTR
61 QALADKGVDE VICVSVNDPF VMTAWGQQSG AAEAGITMLA DPTAEFTKAI GLAFSAPVVG
121 LYDRCQRFAL MAEDGVVKVL NLETEAGACK LTVGEELLEQ I
SEQDB ID: 3101377GMF
Reference:
3101377
Name: pyridine nucleotide-disulfide oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHIVVIGAG QAGASLVARL RKDGFEGEIT LIGAEPVPPY QRPPLSKAYL LGEMEKERLF
61 LRPESFYAEQ NIALRLNARV SAIDPAAKTV SLGGEVIPYD QLALTTGSEP RRLPAAIGGD
121 LAGVHVVRDL ADIDAMAPSV TEGARALIVG GGYIGLEAAA VCAKRGVQVT LVEMADRILQ
181 RVAAPETSAY FRALHTGHGV DIREGVGLTR LIGAQGRVTG AVLTDGSELP VDLVVVGVGI
241 APATALAEAA GLVLENGIRT DAQGRTSDPS IWAAGDCASF PYKGGRIRLE SVPNAIDQAE
301 TVAQNMQGAG KDYVAQPWFW SDQYDVKLQI AGLNTGYDRV VTRPGEGQTV SFWYYTGDQL
361 VAVDAMNDPR AYMVGKRLID SGKTADPAIV ADPAADLKPL LKA
SEQDB ID: 3101377GMG
Reference:
3101377
Name: methyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIIAGAFRG RALASVGKGD AGAHLRPTTD RVRESLFSVL THLDVIEGAQ VLDLFAGTGA
61 LGLEALSRGA EHVTFVDDGR VAQGLITKNI NLTGSLDWTT LIRRDATRLG PNPGAPCGLI
121 FLDPPYGKGM GARALATALA GGWVADDALI VWEESAPMPA PEGFTLHDAR KYGDTHITLM
181 WRAAPS
SEQDB ID: 3101377GMH
Reference:
3101377
Name: hydantoinase/oxoprolinase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLSLGVDTG GTYTDAVLIR DERDVIATAK ALTTRSDLAI GVGNAIRAVL DQAGAAPGDI
61 GLASLSTTLA TNALVEGQGG RVALVYIGFG EGDLDKHGLR EALKGDPALV IAGGHCHTGS
121 EAAPLDLGAL QSFLVSNKGI SGFAVAGLFA TRNPEHELMV ARAITEATGA PVTCSHQLSA
181 KLNGPKRAVT AVLNARLIGM IDRLIGRAQD TLVEIGIDAP MMVVRGDGAL MSAEQARERP
241 IETILSGPAA SIVGARWLTG VSDALVSDIG GTTTDVALIR NGRPKIDPSG AQVGGFRTMV
301 EAVAMRTYGL GGDSQVHVIA EGLQGGVHLG PRRVLPLSLI AAEAGAVVHA ALDAQLRAAS
361 TGEYDARFAR RVLGVPADGI GPRETVLLDR LGTRVLPLSD LLRTRMEQGA LTRLVDRGIV
421 QVSGLTPSDA SHVLGRLDAW DAEAAQKGME LFARKRTGNG ERLAKDGETL ATMIIDQLTE
481 QTAQTLLETA FAEEDADFGL PPEQLARHVL TRRGLSGHRG LLALDVALNL PVVGLGASAA
541 SYYPAVGARL RCDTILPEHG GVANAIGAVV GRVTLRRAGS VTAPAEGRYR VHLVDGPQDF
601 GDPEQAMSLL ETVLRGEAEQ AARAAGAEDI RILVNRDIRQ VPVEGREVFI EAEVTVEASG
661 RPRIAAE
SEQDB ID: 3101377GMJ
Reference:
3101377
Name: Met-S-sulfoxide reductase, Class: EC1.8.4.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: msrA-2
Sequence:
1 MSLERAVLAG GCFWGMQDLI RKMPGVDRTR VGYTGGDVPN ATYRNHGSHA EGIEIWFDPT
61 RISFRQLLEF FFQIHDPTTV NRQGNDLGTS YRSAIYYVDE AQKAVALDTI ADVDASGLWP
121 GRVVTEVEPV GDFWEAEENH QDYLEKHPNG YTCHFARADW VLPKRADAAE
SEQDB ID: 3101377GMK
Reference:
3101377
Name: Met-R-sulfoxide reductase, Class: EC1.8.4.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: msrB
Sequence:
1 MTRYTKSPEA IAALSPEEFH VTQRSGTERP GTGKLLHNKE PGIYVDIVSG EPLFASSDKY
61 ESGCGWPSFT KPIETTHVLE LEDRTHGMIR TEVRSKHGDS HLGHVFPDGP RDRGGLRYCI
121 NSASLRFVHR DDMTAEGYAD YLDQVEDIA
SEQDB ID: 3101377GML
Reference:
3101377
Name: glutathione peroxidase famly protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRIIFLIVL LLVGRSVQAG AVSGSFPSID GGTLSLEEWR GQPVLVVNTA SQCGFTGQYA
61 GLQALWERYQ SAGLVVLAVP SDDFNQELAT AAEVKEFCAL NYALTLPMTN ILHVKGADAH
121 PFYKAVKAET GFEPAWNFNK VLVAPDGSIA ATFGSAVKPD SARMQREIEA LLN
SEQDB ID: 3101377GMM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDLRAIAMGL AFAFMWSSAF SSARIIVADA SPLFSLACRF LISGLLGVII ARAMGQTWRL
61 TRNQWKATIV FGICQNALYL GLNFYAMQTV EASVAAIIAS TMPLLVALAS WGLFGERLPA
121 LGIAGLLAGF LGVALIMGAR IGAGVDLFGV LLCGLGALAL AAATLALRGA TSGGNFMMVV
181 GLQMLVGSAV LFLATPIFET VHVTPTLPLA LAFAYTTLVP GLTATFVWVL LLNRIGAIRA
241 ATFHFLNPVF GVAIAAALLG ERLGALDAIG VAITTAGILA VQLSRQASAR KP
SEQDB ID: 3101377GMN
Reference:
3101377
Name: DNA-binding protein, Isotype: HU
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hup
Sequence:
1 MTKTQLVAAL AEDMGSDKKT ASAALDAVCA LITREVSGGG AVTLPGVGKI YCRERPERQV
61 RNPATGETFT KAADKVVKMT IAKALKDSVN G
SEQDB ID: 3101377GMP
Reference:
3101377
Name: AMP nucleosidase, Class: EC3.2.2.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: amn
Sequence:
1 MTQLITPPTP EPAPFTDAAQ AVARLEELYS QATGFLCESF TTAMQGTEPG ARYRAYYPEI
61 RFSTSSYAQV DSRLSFGHVS HPGTHATTVT RPDLFRSYLT QQIGLLIRNH GQPVQIGPSS
121 TPIPLHFAVA NAPDLVVPHE GAAGFTLRDV FDVPDLATTN DDIVNGTHVS EDGAGPLSLF
181 TAQRVDYSLA RLAHYTATDA AHFQNHILFT NYQFYVSEFE AYARAQLADP ASGYTSFVST
241 GNVEITDPDT QIETLAKLPQ MPSYHLKRAD GSGITLVNIG VGPSNAKTAT DHIAVLRPHA
301 WLMVGHCAGL RNTQALGDFV LAHAYLREDH VLDDDLPVWV PIPALAEIQI ALEQAVAEVT
361 ELSGYDLKRI MRTGTVATID NRNWELRDQS GPVQRLSQSR AIALDMESAT IAANGYRFRV
421 PYGTLLCVSD KPLHGELKLP GMASTFYTTQ VSRHLRIGIR AMETLRGMPL ERLHSRKLRS
481 FDETAFL
SEQDB ID: 3101377GMQ
Reference:
3101377
Name: adenine deaminase, Class: EC3.5.4.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ade
Sequence:
1 MAPRLVAVAA GREPADMIIR NGTWINVHTR EALPGHSIAI AEGRIAFVGP DASHCSGPDT
61 RIIEANGRYM IPGLCDGHMH IESGMLTPAE FAAAVIPHGT TTMFTDPHEI ANVLGLAGVR
121 MMHDEALMQP VNIFTQMPSC APSAPGLETT GYEITPEDVA EAMTWPGIIG LGEMMNFPGV
181 TNADPKMLAE IAATQRAGKT VGGHYASPDL GPAFAAYVAG GPADDHEGTC EADAIARVRQ
241 GMRSMMRLGS AWYDVETQIT AVTEKGLDPR NFILCTDDCH SATLVNDGHM NRVVRHAIAC
301 GCDPLIALQM ATINTATHFG LERELGSTAP GRRADVILTS DLRDLPIELV IARGQVVAEN
361 GKIAVDCPHY DWPDTARGTV HLGHALSARD FEIAAPTGAN RVRANVIGVV ENQAPTKALK
421 AELPVREGLV ETAEHPDDVC QIALVERHRA TGGVTNAFVS GFGYQGRMAM ASTVAHDSHH
481 MIVVGTDREQ MALAANRLAE VGGGITIWRD GQELALVELP IAGLMSDSPA AEVAAKAQAM
541 VEAMAACGCT LNNAYMQHSL LALVVIPELR ISDLGLIDVR SFERIDLLEP LA
SEQDB ID: 3101377GMR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDYDKIDADG FGRSLKGIGL NLLVRDVPAQ CAFLEAVFAM RSHQVTADFA IVSYGNQVFQ
61 LHSDGTYHAN PLLGLLPENP PRGAGIEIRL YDSDPDRAVA RAVAFGATVL QAPADKPHGL
121 REAYILCDNG YAWVPSRPKD SA
SEQDB ID: 3101377GMT
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQNPLPPLGW LRTFEAAARH LSFTGAARDL NMTQSAVSQQ IKALESHLRQ PLFHRRPRAL
61 ELTEAGITYL PVVREAFRTL IRGTRAVTGD NQNTVQVQCN ITFAVNWLGP RLPRFRALHP
121 DVHLNIFTEL WEPREMAEGA AVEIRYSLRP ADTVRTELLR SEQYYPVCAP GYQVTLETLV
181 GQPLYDCSNL LSNWATWAEE QALNWPDPPI TYATTYMVGL SVAMAGGGLC LAHDTIAGSL
241 IEQGRLIAPF AHRAAMPEAY YLLLSPQAEE TPGAVAFANW IRAEIAREVG
SEQDB ID: 3101377GMU
Reference:
3101377
Name: aldolase/adducin N-terminal domain protein, Isotype: class II
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVTSLRPNI DHWQERVDLA ASFRWIERLN MHEGVANHFS LAVNPEGTQF LMNPNQMHFA
61 RIRASDLLLL DANDPRTMEM PGAPDPTAWG LHGSIHRHCP HARCVMHVHS IFATVLASLA
121 DSTLPPIDQN TAIFYNRYVI DDEFGGLAFE SEGERCASML NDPKKRVMIM GNHGVLVIGS
181 DVGDTLNRLY YFERAAETYI RALQTGRPLR VLSDEIAEKT AQELDDYPGQ SEAHLREVKA
241 VLDGEGSTYA S
SEQDB ID: 3101377GMV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MALVQRRGKT MTDFSQDAEA ARWNYRPENP VGLNPLFSWP PRPAAVLRWY RGAWLQLTSL
61 TLCLVLAVAA YTWFLPPLEA MQSFAPGWMF RVWLLNMVPQ IMVAGGLHWW FYMRKGQGMY
121 KKFDRRDLTR DNGTFTFRNQ LWDNIWWTLG SAMTVCTVYQ WLIYWVMANG WVPTVTWAQA
181 PVWFVVWMFF IPMWSGLHFY WVHRLEHHPK LYKHVHAVHH RNVNIGPWSG ISNHWYENIL
241 YFTTYFIHLL VPSHPLHLLF HIYFQQVSPI LSHSGFEKIK TGETEAAKTG DFFHQLHHRY
301 FECNYGTSEI PFDKWFGTFH DGSAEATTRT RAYKKQMYT
SEQDB ID: 3101377GMW
Reference:
3101377
Name: ExsB protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: exsB
Sequence:
1 MKTLVICSGG LDSVSLAHKV AAEHDLIGLI SFDYGQRHRK ELDFAARAAT RLGVPHDLID
61 MRQIGAHLSG SALTDDVDVP DGHYAEDTMK ITVVPNRNAI MLAIAFGIAA AKQADAVATA
121 VHGGDHFIYP DCRPGFTQAF EAMQAQALDG YASVRLYTPF VHEPKSAIVT EGERHNTPFA
181 DTWSCYKGGE VHCGRCGTCV ERREAFHLAG VADPTPYADP EFWRAAVEGR
SEQDB ID: 3101377GMX
Reference:
3101377
Name: 6-pyruvoyl tetrahydropterin synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYRITKEFHF SASHQLCHLP DDHPCARLHG HNYIVEVELA AAELDANGFV RDYRELKPLK
61 TWIDDALDHR HLNEVFGHDM VTSERLAKEV YEFCKARWAE TSAVRVSETP KTWAEYRP
SEQDB ID: 3101377GMY
Reference:
3101377
Name: radical SAM domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTLRIAEIF GPTIQGEGAV IGAPTVFVRA GGCDYRCSWC DSLHAVDSAY RDTWTAMTTE
61 QVWAEVARLS GGVPLTVSLS GGNPAIQDFG PLIEMGKAQG YRFALETQGS VARGWFRELS
121 PLILSPKPPS SGETVDWDRF ADCIARARDA VTVIKIVVFD EADYLWAREV AARFPNLPIY
181 LQPGNHTPPP PDAEDAAIDM DGIMARYEWL IGRALSDRWF TPTILPQLHV LVWGNKRGV
SEQDB ID: 3101377GN
Reference:
3101377
Name: flagellar biosynthesis protein, Isotype: FlhA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flhA
Sequence:
1 MPKLTTETLF SPTVLLAIAL MAIIVMMILP MPAWVLDIGL AASFALAILI FTLTLFIERP
61 LDFSAFPTIL LASLMLRLSL NVSSTKLIIG QGHTGPNAAG DVIEGFAQFV MGGSVFLGLV
121 VFGVLLIVNF MVITKGAARM AEVGARFALD GMPGKQLAID SDMSAGAIDH QEAKARRELE
181 QQETTFFGSL DGASKFVKGD AIAGLLITLL NLVMGLIMGV VVHGMPMSAA FETYAILTVG
241 DGLVSQIPAV IISIASALLL ARGGTQGATD NALFAQLGKH PAALATVALL MVLFALVPGL
301 PFLPFISGGA VLGYAAWRMR LKQKQEAESA ARITEEQTPV ARQGIGDILD LDDVHLEFAP
361 DLVGMALDPG TGLDARIANM RTHVASIYGL ILPDIRLTDQ AELPQGTYVI KVQGVEQVRG
421 VLHPDLVLAL MTDHPDALPA GEDVTEPVYG APARWILPKD QEAAALSGAT IVSPPEILAT
481 HLLEVIKQNF ARLLTLKSLR RLLSEMTRLS DPVRSEANQK LLDELIPDKV PIDTLHAVLR
541 LLLEERVSIR NMPLILEAVA EARLATTQPE AICEHVRQRL GFQLVAEMKR ADGSIPLVQL
601 APEWEDAFAT YQVDGAGGGL DIALPPDLFN KLADGVAKRL SQTAGQGIFA ALVTSTRRRR
661 FLRTILRARG IPNPVLSFEE IGMEARPALV GQVPA
SEQDB ID: 3101377GNA
Reference:
3101377
Name: GTP cyclohydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MANQDIYANL TQLGGKTELP NSPEEAVLEK VPNPQAGTDY AVRFTAPEFT SLCPLTAQPD
61 FAHIVIDYVP GDWLVESKSL KLYLGSFRNH GAFHEDCSVS IGKRLVELLA PKWLRVGAYW
121 YPRGGIPIDV FYQTGPELPG VWIPDQGVPT YRGRG
SEQDB ID: 3101377GNB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRPRAMCKR WIDALDSNPL LGLQLCMSIK TPDLDAAYGL QSPEDNRQLY AEWAGDYDDG
61 FAAREDYQLP AHTARAFVAA GGQGPVLDVG AGTGLCGAIL AGLGVGPIDA ADISAEMLER
121 AMRKDIYRDA IETDLNQGIP APRESYSGIV SSGTFTHGHL GPEVFPALLR VARPGAQFAI
181 SINARHFEEK GFDLALRRMA QGQIENLKLP QVRIYGDLAA GPHKDDLAYI ALFEKS
SEQDB ID: 3101377GNC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGTLLSFGH GYTARVLSRA LAPQGWRIIG TSRNPDQMEA IRASGAEPLL WPGEEPSLDG
61 VTHLLISTAP DSGGDPVLAA LGDQIAARAA QFRWVGYLST TAVYGDHDGA WVDETTPLTP
121 TAARGRWRVM AEQQWQAVPN LPLHVFRLAG IYGPGRGPFS KLGKGGIRRI IKPGQVFSRI
181 HVEDIAQVLA ASMARPDPGA VYNVCDDEPV PPQDVIAYAA ELQGLPLPPA VDFDKADLTP
241 MARSFYSENK RVRNDRIKEE LGVRLKYPNY RVGLEALQAD AET
SEQDB ID: 3101377GND
Reference:
3101377
Name: OmpA domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILRLALCAA LAATPALAQD LSLTLPQGSR QLTERIRALD GYALPTGVHG AEGVPSVQLE
61 GRIEKRTWRI SVGSKTTLQV FAPLRDQILE AGFEILLDCP AESCGGFDFR FATEVVPSPD
121 MYVAVRDYRF LSAMRGDEAL SLLVSRNPPD AYVQLIQAFP AGSVATDPVT VEKPAAVVVP
181 MDLAGRLQTR GRVILSGLEF ATGSDALGEG PFDTLAELAQ LLSANAELRL VLVGHTDTVG
241 GLEPNIELSR KRAGAVRARL VEEYGIPADQ ISADGVGYLA PIASNLTPEG REANRRVEAV
301 MLSQ
SEQDB ID: 3101377GNE
Reference:
3101377
Name: alkylhydroperoxidase AhpD family core domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDQTRPTAL DLPMVDPLPQ ETQKYFDICV EKLGMVPNVL KANAFDIAKL NAFTAMYNDL
61 MLAPSGLSKL EREMIAVVVS SINKCFYCLV AHGAAVRQLS GDPKLGEMLV MNYRVAPLDA
121 RQRAMLDFAA KMTTASAEIE ESHRQALRDV GFSDRDIWDI ANVAGFYNMS NRVASATAMV
181 PNDEYHSQFR
SEQDB ID: 3101377GNF
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPDWFAVVD ATWPAADSRT DGTLTLREGR GGGKRVSAAS ASGAVSEPQI EAAEAAMRQM
61 GQPPLFQLRP GDEGLDAALA GRGYSIVDPV NIYACPVSQL TDLPMPRVTV FALWEPLAIM
121 RELWAEGGIG PGRLAVMDRV KGPKTGLLMR HQDKPGGVAF VAIHDGVAML HALEIPPHQR
181 RKGLGKWAMR GAAFWALDNG AHTLSVICTK ANEGANALYR SLGMQLVGEY HYRLLQEERQ
241 TA
SEQDB ID: 3101377GNG
Reference:
3101377
Name: Mo cofactor biosynthesis domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPNPTAAMLV IGDEILSGRT RDANMYYLAG ELSKHGIDLK EVRVVSDDAP AIETAVKALS
61 DGFDHVFTSG GIGPTHDDIT ADCIARAFGA AIDVRADARA LLEAHYAKTG LELNAARLRM
121 ARIPDGATLI DNPVSTAPGF TLGNVHVMAG VPSVFQAMVA SILPTLTGGQ PLLSQTLRID
181 RGEGDIAATL TQLAEDFPDL TIGCYPFQIN GAFGANVVVR GTDGVRIDAA VTRLARETAQ
SEQDB ID: 3101377GNH
Reference:
3101377
Name: sugar fermentation stimulation protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sfsA
Sequence:
1 MRFQTTLVPA RLIRRYKRFL ADCQLEDGRE VTAHCANPGS MMGLADPGTK IWLEPNDDPK
61 KKLKFGWRLV DHENGHFTGV DTSVPNRALK TALERRAIPS LAAYETVRPE VKYGQNSRID
121 FLLSGPGLAD AYVEVKSVTL CREPGLAEFP DSVTARGAKH LAELAAMAGL GHRAIMLYLV
181 QRTDCDRFTL AADIDPAYAR AFETARAQGV EKLILTTHIS PQGVEIADML
SEQDB ID: 3101377GNJ
Reference:
3101377
Name: Met aminopeptidase, Isotype: I, Class: EC3.4.11.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: map
Sequence:
1 MKEHRGRLTR DGIRIYEPTD FAGMHAAGAV AARILDDIAE HVFPGQSTGE IDRIITGMVE
61 AAGAKSATIG YKGYEHASCI SVNHVVCHGI PGDKRLGEGD ILNIDVTVIV DGWFGDTSRM
121 YVAGKLPRKA ERLIQVTHDA LFKGIEMVKP GNTFGDIGHA IQTYVEAHRM SVVRDFCGHG
181 LGQVFHAPPN VLHYGRPGTG AVLEEGMFFT IEPMVNLGRP ETKTLADDWT AVTRDKSLSA
241 QFEHSVGVTA NGVEIFTLSP GGKFHPTYA
SEQDB ID: 3101377GNK
Reference:
3101377
Name: HAD-superfamily hydrolase, Isotype: subfamily IA variant 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRHDLVIFDC DGVLVDSEPL SNRVLSDNLA RYGLNLTLED TVSLFLGSTM TGVRDKARAL
61 GAHLPDDWVD QVYAETYDRL RAGVPLVAGI SDLLAALDAR ALPYCVASNG SPDKMRITLG
121 QNGLWERFRD RMFSAHVLGT AKPDPLLFQT AAAQFDATSP VVIEDSPSGV TAAVRAGMRC
181 LGYVAHGDGA NLRALGAEVF HDMAEVPVLL AL
SEQDB ID: 3101377GNL
Reference:
3101377
Name: Fe-S cluster-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGELKDRLV ARALEEGFVS CRVCRPWDVP EMPARLGAFV EAGYHGQMGW MAERMEWRGD
61 PAALWPEARS VIMLAESYAP DTDPMEVVGQ PDRGAISVYA RGKDYHDLVK KRLKRLARWL
121 IEAGGGEVKV FVDTAPVPEK ALGQAAGLGW QGKHTNLVSR DWGNWAFLGS VFTTLDLPSD
181 PVGRDNCGSC SACLTACPTD AFPAPYRLDA RRCISYLTIE HKGPVDEELR AKLGNRIYGC
241 DDCLAACPWN KFAVAASDLR YGARPELSAP ALADLARLDD AGFREMFSGS PIKRIGRDRF
301 VRNVLYAIGN SGLPALRPVA QDLAQDSDPT VADAARWAAA KLAMSR
SEQDB ID: 3101377GNM
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARLFHVPLS PFCRKVRLLL AEKKIEVELV EERYWEGDPD FLRRNPAGKV PVIKLDGKML
61 AESAAICEYI EETRPEPPLM PKDVDGRYEV RRLVCWFDDK FHNEVTSNLL YERVNKKVTG
121 QGYPDSRNVK AGAKAIKYHL DYMAWLLDHR RWLAGDQMTL ADFAAAAHLS SLDYISDVDW
181 NRSQVVKDWY AKIKSRPSFR SILADQVPGF RPPPHYADLD F
SEQDB ID: 3101377GNN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAPLTFARL TQVDPNLITA HMRDPRLAIH MPLMPDSWSD AQTVSFVQSK EACWDRDGLG
61 HWAFLHQDRY VGWGGFQREG EEWDFGLVLC PAHFGLGLPI ARKALDFAHA DPRIPFVTFL
121 LPPSRQHLGA LRRLGAQPLG ETDHAGHRFL KFRLDTA
SEQDB ID: 3101377GNP
Reference:
3101377
Name: monofunctional biosynthetic peptidoglycan transglycosylase, Class: EC2.4.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mtgA
Sequence:
1 MAKRTTNTRK KKARKADTKL RPGRWVLRWV SRAFAAGFAA LLVLVLLFSM INPPITHTIW
61 SEYSRLGKVE RDWVPLEEIA PVMARSVVAA EDANFCLHWG FDVNAIRAAI DEGSGRGAST
121 LSQQVVKNVY LWQGRSWIRK ALETAITPLV ELTWSKRRIV EVYLNVAEMD EGVFGVAAAA
181 DRYFGVSPDK LSAQQAARIA AVLPNPRGRS ASDPSPRLRK RAAAIMDGAA TIAADGRSDC
241 FE
SEQDB ID: 3101377GNQ
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRGEQTRKTG QGRDMANITL IAQNVNGDPF VNGGTINIVN NSTSVLTFVD VDTQLNDPLS
61 GEYVSFDGGV TLLSYQYLGV GDVRGDPGQR ASFIRIDLGD GSFMTVALDM NADFDDVPDL
121 QNGNTQLTLE TLDTTSTNWF PGFACFAAGT FIEIESGPIP VETLRPGDLV QTLDNGLQPL
181 LQLAKTTVRG DGALAPVLFR AGVLGNFRDL YVSQQHRMLI TGWQAELACG ESEVFVPARM
241 LVNGSTIRIA PRHKLTYYHL LFARHEIVFS EGIPTESYFP GAIEAPEDGA DEDAEAALFQ
301 ELAITGGAGW QTARRVAKSA EAQLLLAA
SEQDB ID: 3101377GNR
Reference:
3101377
Name: Glu synthase, Subunit: large, Class: EC1.4.1.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltB
Sequence:
1 MTKYDADWVR AEEAKRKWLA ENGLYSEEEE HSSCGVGLVV SVNGKRSRKV VEAGIDALKA
61 VWHRGAVDAD GKTGDGAGIH VQIPVPFFYD QIRRTGHEPR MNELVAVGQV FLPRTDFGAQ
121 ERCRTIVETE ILRMGYFIYG WRHVPVDVTC LGEKANATRP EIEQILISNS KGVDEETFER
181 ELYVIRRRIE KAAQAAGIAG LYLASLSCRS IIYKGMMLAE QVAVFYPDLM DERFESAFAI
241 YHQRYSTNTF PQWWLAQPFR MLAHNGEINT LKGNLNWMKS HEIRMASSYF GEKAEDIKPI
301 VPGGSSDSAA LDAVFEVLVR AGRNAPMAKT MLVPESWSKQ AVELPQAWVD MYSYCNSVIE
361 PWDGPAALAM TDGRWVCGGL DRNGLRPMRY VVTGDGLLIA GSEAGMVPTD EATVVEKGAL
421 GPGQMIAVDM AKGKLYHDRA LKDKLAASRP FGDWVGKINN LEDQLGDVEE TPLFTGAELR
481 KRQIAAGYSV EELEQVLAPM AEDGKEALAS MGDDTPAAVL SKQYRPLSHF FRQNFSQVTN
541 PPIDSLREYR VMSLKTRFGN LKNVLDEDSS QTEIIVAESP FVGNAQWETL KKNFNAPLVE
601 IDCSFEQGSA GLGAALARIR SEAEEAVSSG AGHLLLTDQY SGPGKVAMPM ILATSAVHSH
661 LTRKGLRTFC SLNVRSAECI DPHYFAVLIG CGATVVNAYL AEDSIADRIK RGLLDGSLTE
721 NIARYREAID QGLLKIMAKM GISVVSSYRG GLNFEAVGLS RAMVAEFFPG MTSRISGIGI
781 KGIQTKAEEI HARGWDSGLD VLPHRGFYKA RKSGETHAWE ATSMHMMQMA CNRASFELWK
841 QYSAKMQSNP PIHLRDLLDI KPLGKPVPIE EVESITSIRK RFVTPGMSLG ALSPEAHKTL
901 NVAMNRIGAK SDSGEGGEDP AHFVPESNGD NPSAKIKQVA SGRFGVTAEY LNHCEELEIK
961 VAQGAKPGEG GQLPGMKVTD LIARLRHSTK GVTLISPPPH HDIYSIEDLA QLIYDLKQIN
1021 PRAKVTVKLV ASSGVGTIAA GVAKAKADII LISGGNGGTG ASPATSIKFA GLPWEMGLTE
1081 AHQVLSMNNL RDRITLRTDG GLRTGRDIVM AAMMGAEEYG IGTAALIAMG CIMVRQCQSN
1141 TCPVGVCTQD ESLRAKFTGN ADKVVNLITF YAQEVREILA SIGARSLDEV IGRADLLAQV
1201 SRGSAHLDDL DLNPLLITVD GAQNIVYDRA KPRNVVPDTL DAEIVRDAAR FLEDGEKMQL
1261 SYSVQNTHRT VGTRVSSHIV KRFGMRNDLQ PDHLHIKLRG SAGQSLGAFA APGLKIEVSG
1321 DANDYVGKGL SGGTIVVRQP QVSPLKADEN TIIGNTVLYG ATDGHLFAAG RAGERFAVRN
1381 SGAKVVIEGC GTNGCEYMTG GVAVILGGIG ANFGAGMTGG MAYLYDPDGQ AQLLMNMETL
1441 VTCPVSVAHW EAQLKELVER HAEETRSAKA AHILQHWDIE KGNFLQVCPK EMLNKLPRPL
1501 SHDSLAMPAE
SEQDB ID: 3101377GNT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTELHGECMC GAVTITATPA RAALGACHCD MCRRWTSSAY VSFPVEPGYA ALGPVKVYGS
61 SDWAERAFCG TCGSVLWYRI TLPGKMHGQT QMAAGLFENA GGNALKLELY IDKKPEGYAF
121 AGERRQMTQA EVEAMYAPSD LGDSQ
SEQDB ID: 3101377GNU
Reference:
3101377
Name: Glu synthase, Subunit: small, Class: EC1.4.1.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltD
Sequence:
1 MAKQPMLKFV QIERDMPEKR AADARKEDFH EIYAEYAAVK AAEQASRCSQ CGVPYCQTHC
61 PLHNNIPDWL RLTATGRLQE AYETSQATNT FPEICGRICP QDRLCEGNCV IEQSGHGTVT
121 IGAVEKYITD TAWDMGWVKP ASPVAERSES VGIIGAGPGG LAAADMLRQA GVQVTVYDRY
181 DRAGGLLMYG IPGFKLEKEV VERRNRLLAD GGVRFELNCD VDAAKFAELR AAHDAVIIAT
241 GVYKSRDLSM PGSGLGGIEK AIDYLAASNR KSFGDEVADF DNGRLNAEGK RVVVIGGGDT
301 AMDCVRTAIR QGAVSVKCFY RRDRANMPGS QRETQNAEEE GVVFEWLSAP KGFTGDDKVA
361 GVMVQKMRLG QPDASGRQSP EVIEGADYVE EADLVIKALG FEPEDLPTLF GQPDLPVTRW
421 GTVKAAFRTG ATEMEGIYAV GDIVRGASLV VWAIRDGRDC AEAILEGFGA KTAMAAE
SEQDB ID: 3101377GNV
Reference:
3101377
Name: undecaprenol kinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLFHLILVA LIQGITEFLP VSSSGHLILL PALTGLEDQG QVIDVAVHVG TLGAVVLYFW
61 RDVRDGLAGL PRALTGRLDT PGARLAMGLI VATIPTVLAG AALHFTGLSD ALRSITVIGW
121 TMLLFGLLLW WADRTGAQVK EATDWSLRDA LILGLWQAVA LIPGTSRSGI TITGARAMGY
181 TRSDGARISM LMSIPTIIAS GVLLGADVAV TSDAQAARDG AIAAAFAFVS ALLALSLMMR
241 LLRSVSFTPY VIYRLALGLV LLGIAYS
SEQDB ID: 3101377GNW
Reference:
3101377
Name: NADH ubiquinone oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKLVTIYGG SGFVGRYIAR RMAKEGWRVR VAVRRPNEAM HVKPYGAVGQ VEPVLCNLRD
61 DNSVAQTMRG ADAVVNCVGV LNELGRNSFD AVQAEGAERI ARIAAEQGVA RMVHVSAIGA
121 DGDSDSAYSR SKALGEAGVL RHMPDAMILR PSVIFGTEDQ FFNRFAGMTR FGPFLPVVGA
181 ETRFQPVYVD DVARAAVKGV LGQAPGGVYE LGGPDVETFR ALMQRMLGVI HRKRIIIALP
241 FFAARIMAGM LDVAKFVSFQ LFPNNILTRD QLKNLRRDNV VSEGAKGFAD LGIAPEPMDT
301 VLPAYLWKFR PNGQYDEIQA SAKNLRA
SEQDB ID: 3101377GNX
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKQLATAIA AAMLTVSVAP AVYAEVTVKV AYDADPVSLD PHEQLSGGTL QLSHMVFDPL
61 VRWTQDLQFE PRLAESWEQV DALTTRFHLR DGVTFHSGNE LSSADVKWTF DRLKTSPDFK
121 GIFAQFSEVK VIDEDTFDLI TTEPYPLVLH TATYIFPMDS KFYSGTTADG KDKAELVKHG
181 DSFASRNVSG TGPFIVTARE QGVKVEFERF GGYWDTASKG NVDKIVLTPI KEDPTRVAAL
241 LSGDVDFIAP VPPTDLKRVE EAEGVNLITM PGTRIITFQM NQNRVEAFKD KRVRLAIDYA
301 VNNAGIVDRI MRGFGTVGAQ ASPAGYLGYD AGLTPRFDLE KAKALMAEAG YADGFSITMM
361 APNNRYVNDD KIAQAVASML SKINIKVDLQ TMPKAQYWPK FDERAADMMM IGWHSDTEDS
421 ANFHQFLSAC PDEATGNGQY NSGNYCNPEA DKLMNASNSE TDVEKRGNML RQLEGILYEE
481 AAFVPLHWQN LAWGARSGVH AEAIVNALDF PYFGDLVVD
SEQDB ID: 3101377GNY
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLAYLVKRVF QAIAVMFVIS LVGFAIQDNL GDPLRELVGQ SVSEEVRQQL RDELGLNDSF
61 LQQYIRFLGN ALQGDLGTSY FFKEPALDVI LKKLPATLEL VAGATLIIVG LSVPLGVYTA
121 IRPNAIFSRI VMGVSIVGIS IPVFLTAILM IYLFSVTYGW FPSYGRGDVV HVFGYWDTNF
181 ATLDGWMHII LPSIALASIM LPLFVRLIRA EMMEVLQSEY VKYARAKGIR PWRIYFVHAL
241 KNTLLPVITV GGVQIGTMVA YTILTETVFQ WPGMGFMFLE AVNRVDTPLI VAYLIVVGFI
301 FVVTNTIVDL IYGLVNPTVN LARMGA
SEQDB ID: 3101377GP
Reference:
3101377
Name: flagellar biosynthetic protein, Isotype: FliR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliR
Sequence:
1 MIALPPELLA LISGELWQLF AVFLRVSALV SVLPAFGEQS IPMRVRLGVA AAFAVIVAPA
61 TPQAPEITNV LQFAMLAGTE ALAGLVMGLG IRLFAMALQV AGMIAAQATS LSQLLGNAVA
121 EPTPAMGHLL MMDGLALAVM SGLHVRVAEF LIHSYTIFPI GKLPHPGDLS QWGVAQIGRM
181 FALAFALAAP FVIASLIYNL ALGAINRAMP QLMVAFVGAP VITFGGMALL LVGTPLLLSV
241 WLDALWSFFQ DPVGARP
SEQDB ID: 3101377GPA
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSLTTNPEP SRWSRIWNSN MGYSFRRNPV AMVSLAIFLV IAVMAFFAPL IAPFDPYDPA
61 QIDIMNSEYP PVWVDGSDPQ FVFGTDDQGR DLWSTILYGT RLSLLIGVCA VALQAFLGIS
121 IGLIAGYVGG RIDSLLMRLA DIQLSFSTLM VAIIFLAVTQ AMFGSETFNQ YAIYFLIAVI
181 GVAEWPQYAR TVRATVLAEK KKEYVDSARV LGFSPMRIMV RHILPNSLSP IFVISTVQVA
241 NAIISEASLS FLGLGMPPSQ PSLGSLISSG FDYIFSGSWW ITAIPGVVLV VLVLVINLLG
301 DWMRDVLNPK LYKG
SEQDB ID: 3101377GPB
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSSTPNFTRG KTMSLLSVRD LTVKFAMRDN TVTALNKISF DLARGERLGI VGESGAGKSI
61 TGFALMNLLS RPGFIDSGSI LFEGEDMASK SEAQLQAIRG NRMAMIFQDP MVTLNPVLTI
121 GQQMVETLMA HRRLSRAEAE EISILKLREV YIPSPEERLK QYPHELSGGM RQRIIIAIAL
181 LLDPQLIIAD EPTTALDVTI QADIMELLLE LCQSNKVGLI LITHDLGVVS QMTERTLVMY
241 AGRIIEAGRT REIINDPQHP YTQGLINALP QQTRPGHRLK QIPGNMPSLT AIPPGCPFSP
301 RCEYAVDRCR VELPEPVRYD HVEVACHEVN RLQKPVAEEQ SA
SEQDB ID: 3101377GPC
Reference:
3101377
Name: oligopeptide/2-peptide ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDMTSQPLL ELKNLEKRFL LDHGFLETVK LRGGKLIRER RQVHAVNNVS LSAQRGEALC
61 VVGESGCGKS TVARLVAGLL EPSGGEIHYS GERIDNRSRQ ANMALRKKMQ MIFQNPYASL
121 NPRMTIRQAL EEPVRYHNPS MSRAEIRDKV AEVMRSVGVD PSWSGRYPHE FSGGQRQRIA
181 IARALTVDPE FVIADEPISA LDVSIQAQVL NLMLEAKDER GLTYLFITHD LSVVQHFGTR
241 VAVLYLGTVC ELADTATLFE NPKHPYTRAL LSAVPQLKDD RPNHIRLKGE IPTPINLPKG
301 CPFQSRCAYA DQRCKVDLPR PQQQPDGSLV ACHAVEEGRL GD
SEQDB ID: 3101377GPD
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIAWLKDFE ALVAQRNFSR AAEERNVSQP AFSRRIRSLE EEIGARLINR QTLPLSLTPA
61 GEVFLAQARL MLRTFEETQE RCQAIEAAGE NVIRFATTQS LYMTHYKTLI APLTEQSGFE
121 TDLNSTGWAA DQFVSALQQR YCDVILTYWH PAMDFLAPLE VSKCDFIEIA EDDFIPVSKA
181 APNGAPLFDL QGNRKKPLPL LSYGRASALR SVLEHVLRQQ IEPPNVLIVN QNALAHSVKA
241 MILEGFGLGW LPRHLCAQEL ADGRLTLAGG SAFQTKLSVR LYRESENEKS TLNRLWRDLS
301 AG
SEQDB ID: 3101377GPE
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKFDGYFLR QLLVLCGFFA FVLVGVFWIS KAVSLFDRLI SSGQTAMVAL EFTALTLPTL
61 VRTVMPMAAF CATVYVTNRL NRESEMTVML ATGSSPFRLA RPVILFGLVC AAMLATITLY
121 LRPAAMLRLE ARQAEVAGDM TAQLLNDGQF MHPVKGVTVY IGKIDRDGTL NDVYLSDRRA
181 PERVVTYTSS KAFLARSGEQ IALVMVEGTA LQMETGRRTL STTVFRDFSY DISALAKRDI
241 ERRQDIRGMP TLALATAFDG EGLAETYSRG EISEELQERL SWIGVSVAVT LIGFSTLMLG
301 TFSRFGLWPQ LIAAFAGLIA LEGMRSTATA FVGSHPGLWW VQHAPALGGI ALSILFLKLA
361 GRPLRLRRYP DTGSV
SEQDB ID: 3101377GPF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPLICELGM GADVHGHDYT KAALRGVSDA IRHSSLTLFY AYKHPSQMRV EVTVGVPEPE
61 KVDKKAVAAA LPFGAVEVTV VQGGLNDLGM GGAEDIVLAA VAVKAWLDTT DHPFRLAEGL
121 ETLLG
SEQDB ID: 3101377GPG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKTQFAVQM GMGTDLKGQD YTKAAARAVH DALHRNFLTA GAAFDLPLDR MIVDIRVGVG
61 RPEAVDLEVV KSEAPVGRVT VEAVQGGLDI EMMGHTTLIA NAIVCASWDV EIAQ
SEQDB ID: 3101377GPH
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDAIRITDVV KRYPEFTLGP INMSVGQGEF FGIFGPPSTG KTSVLKLILG LLTPDEGQVE
61 IAGRDAAEME VSARGISMVF QNLALFPHMT GRENIIFPLK ERGASEAEIA ERLDLVSEVL
121 HVSHILHKNP AQMSGGERQR IALGRAFAAQ SRAMLLDEPI AALDARLREE MRVELKRLQR
181 ENNQTFVYVS HDEEEVMAIS DRVAVIVGGR IAQIGTPEEV YNEPCSLAVA EVIGSPPMNF
241 FEGRFSAEGL RFESDVLETD IQVVCTTQKG GAGTLGVRPE DIWLGESEGN PSFKVRVSTV
301 EPLGGYTIIN ARIGKQIIKI RAPGQVALEE DAWQSVSLDA RRLHLFCAKG SRL
SEQDB ID: 3101377GPJ
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPRALPTWP GNRGKGMSSI QINNVTKRFG DFTAVRDLSI DIEEGEFVAL LGPSGCGKTT
61 TMNMIAGLEE PSEGEILFDG KDLSSLRIQD RNIGFVFQNY AIFTHLSVFK NLSYGLEVKK
121 VPKPEIERRV QAMADRMSIS HRLDQPASSL SVNEMQKLAI GRSAIVEPRI FLLDEPLSNL
181 DAGFRAYMRA ELKVLQHEFG QTMIYVTHDQ IEAMSLADKI AIIDQGKLMQ YGAPLDIYND
241 PQNRFVANFV GSPRMNLVDG ELREERGALH LMLHGGAEIP LSGKVRADFT RDGSVHGGSF
301 GVRPQDIYFG DKRGSNDIAM HGKVEVLERV GPKRLAYLQV QDTLFLAFDD LDRLRVGDEV
361 PFYLPSDKSL AFDMKTGRRL GGA
SEQDB ID: 3101377GPK
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDHTLTDRQ PTDASRGYWQ RVARDGDKMG FWFILPTFLL LLFIVIFPLF MQLYLSVTWW
61 TPLEGIPWYS AWEVFNWGEN YWFLATDPRF WGALWRTALI MIVAVPAQFL LGMALAYLFI
121 DTFPGRKIFY SILLTPMMIV PAVVGLMFFL LFQGTGPVNA HLGLPAEFSW LTDVNRAMIS
181 VIIADIWQWT PLMFLILLAG MLGVPSDQLL AARLLGGSNW QNFVKIILPR MKTVIIIALV
241 LRAVECFKIF DLVYIMTKGG PGVQTETISV FLYKQTFGEL EWSYVAAIGL TILIVLSVIA
301 AKGLAYMARK QG
SEQDB ID: 3101377GPL
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKPSPGALAL KYLFVLLACA VVLYPLLWMV TMAFKPYPEW TTVAGLTWLP KEPTWQNFEF
61 IFYGQAEGLV VSLDRTITGP LVASLVTSIC GTLLAVVCGT LSSYAVVRFG MAQSLPLSVL
121 QLRLFPPLAV MIPVMVMWAF IGAVDTWWGL SLIYGIVTLP FAFWLMKTFF EEVPVEIEDA
181 ARVSGCSYWR VFYRITLPIV KPGLATCALF VFILNWSDYL LALLLTQKEW VTLPVYMATL
241 TSAMGGQMYG MKAALGVIAA IPPVVFGLMI QKHLVRGLTF GALKQ
SEQDB ID: 3101377GPM
Reference:
3101377
Name: sugar ABC transporter, Subunit: periplasmic sugar-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPIREERMKN SSQIMTNPTR RAFLQNSSAA AAAAGFGGIG SFIASPVFAS DYAPGMTGGP
61 TGFEGAERFQ YNNTMSEGRA IEGIKALQAA GNAPAKISML LTDGAIGQIT KPFPEGGPSA
121 KEVWERETGI EIDIVGAPAE DIFKKVMQDV TTGGGTFDIY TGPWNSTGDL VSSGGAVNCS
181 DFVAKYQPDW ADPERGTPTP EMEKLLYTYA GDYYSFSLDG DFQTWFYLKG LYEDPRVQDA
241 FLSETGVALK TPDTWEEVDR ISKFFTGKDF GNGPMYGNGN LMSPFWGLAT FYARFASMDF
301 PNYHFFDEDG NPNLNSDLGI QCAEEHVRSF EWCPPDALTF TWAEAYATMW NLQIPHTAIY
361 TNLVKFGDGY NADGTPKSKA TGMIGSHLPV GRRFGDQLNR RSVLYYHITA WISSQSQHPE
421 AVYLFLQWLS STRTYTWMAG NPGGYFDPMQ QANFKEPLVA STYHPYAMET IPQTIARSVP
481 SINFAGQTAL DNALDEEIQA AITGQKSARE AMDAAQSKWE RIIKRQKRNG IVDAIKASRA
541 TWPTIVDPA
SEQDB ID: 3101377GPN
Reference:
3101377
Name: acetoin catabolism regulatory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acoR
Sequence:
1 MDQSIAFARH VQEIVSAAEG KQTTRDPEVV QSWLRCLNDY KLDPEHKGEA RILPQNILRQ
61 HQQEAEDLMT IARFGMEDLY RRVNSMGYVL LLTDAKGVTV DFIGDEKVDR ELKRAGLYIG
121 SEWSEQNAGT CGVGACLTSG EAIVVHQTDH FDMAHTPLSC TAAPIYHSDG SLIGVLDVSL
181 LMSPTEKYSQ ALTLEVVKSC VRRIELANLM NSRKSDWILR LNRTSEFLGV DPSCAISVAS
241 DGTISGLTHG AHQLFSKAQG VRKFSAQSFV GKPFEEVFDF DFNDIPCLLA AETPGEQALE
301 LSDGQVIFAD VQAPLRRERA PARSVLPKPL AGIHGGDASM QILAEKAARI VDKQISIILE
361 GETGVGKEYV AKALHASRKK KGPFVAINCA ALPEALIESE LFGYAPNSFT GANAKGKKGL
421 IEQANGGTLF LDEIGDMPLV LQARLLRVLA EKEVMPVGAT KPVPVDIRVI SASHRKLKSL
481 VDAGQFRQDL YYRLNGVVLS IPALRDRTDK PWVIRQIAAL VSEGSVMRFS KPAEEALLAH
541 DWPGNIREMI NVFELCLALS NDGVVGIEDL PENLIPQ
SEQDB ID: 3101377GPP
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVQKEKLAQ ANKRLMGLFK ADQKTMMAFK TLSDTAVREA QVSTAMKEMI AVAIAAARGC
61 EDCILYHVNE AKSHGAERGT LVEVLAVAIE MSGGPGTVYA AKALDAFDQL
SEQDB ID: 3101377GPQ
Reference:
3101377
Name: acetoin dehydrogenase complex, Subunit: E2 component, Class: EC2.3.1.12
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acoC
Comment: dihydrolipoamide acetyltransferase
Sequence:
1 MSDLITPILM PKWGLSMREG TLAAWHVEEG TEISPGDEIM DVETDKIANV VEAADGGLLR
61 RRVGQAGEVY PVRALLGVLA PESVSDAEVD AYVDAFEMPQ IEEEEDTGPA HEFADLGVGR
121 IRYITREGEG VPVILIHGFG GDLDNWLFNI DALAEKAPVH ALDLPGHGQS VKTVDDPGLG
181 TMVDAVVQLM DHLNIDKAHL VGHSMGGLVS GQVAIEHPGR VASLSLICSA GLGDEINAGY
241 IDGFVGAASR RDLKPVLKDL FADQSLVSRA MVDDLLKYKR LDGVQSFLEA LRGNLFAGGR
301 QAAGIAAALA GFNGPIQVIW GADDAVIPQS HANAIADASV TVVEGAGHMV QMENASRVNE
361 LISHHL
SEQDB ID: 3101377GPR
Reference:
3101377
Name: acetoin dehydrogenase complex, Subunit: E1 component beta, Class: EC1.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acoB
Sequence:
1 MARTLSMKDA INEALDQEMT RDPTVIMMGE DIVGGAGAAG EDDAWGGVLG VSKGLYHKHP
61 KQMIDTPLSE SAYVGAAIGA ATCGLRPVAE LMFIDFMGVC LDQIYNQAAK FRYMFGGKAE
121 TPVVIRAMCG AGFRAAAQHS QMLTPIFTHI PGLKVVCPSN AYDTKGLLIQ AIRDNDPVIF
181 LEHKNLYASE CDVPEEPYAI PFGEANIARE GSDVTIVTYG LMVPNSLAAA ETLKKEGIDV
241 EVIDLRTLSP IDMDTVIESV ENTGRLVCVD EANPRCSIAT DVSASVAQDA FKALKAPIAM
301 VTAPHAPVPF SPALEDLYIP SPDRIAAAVR KTMGA
SEQDB ID: 3101377GPT
Reference:
3101377
Name: acetoin dehydrogenase complex, Subunit: E1 component alpha, Class: EC1.1.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acoA
Sequence:
1 MSNPFPLEKD GLLEAYRRMK TIREFEERLH VDFGRGDIPG FVHLYAGEEA AGVGIMMHLK
61 DLDRIASTHR GHGHCIAKGV DVKGMMAEIY GKSTGSCAGK GGSMHIADLS KGMMGANGIL
121 GAGAPLVCGA ALAAQKLGHD GVGITFFGDG ASNQGTVLES MNLAAIWNLP AIFVVENNGY
181 AESTSVDYAV ASDSYVDRAT GFGMPGITVD GTDFFAVYEA AGEVVKRARE GGGPTLLECK
241 MIRFFGHFEG DAQTYRAPGE NEDNRKNRDC LKIFRAKVTE AGVLTNAELD AIDAEVATLI
301 EDAVREAKAA PLPTPAELTT DVYVSY
SEQDB ID: 3101377GPU
Reference:
3101377
Name: acetoin catabolism protein, Isotype: X
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acoX
Sequence:
1 MTKVGIIANP VSARDIRRIV SHAGNLPIND RANIVLRMLT GLMATGVEEV VIMPENGGIR
61 TQLMRTIDRE ARMGHLRFPR VSYLDMPVTC TSDDSAEAAR QMHDQGVGAI VVLGGDGTNR
121 VVVSRCGNTP IAGVSTGTNN AFPELREPTI TGLAVGLAVT GQVPCDHAYS YNKRLEVRVN
181 DQREIALVDV AVVSERFIGA RAIWKTANFR DLFVTFGRPD GIGMSSIIGL LAPLDRQTPE
241 GRRARLLPLE TAKTRLVAPI APGLIEEVGI GGVEKVLPDT VYLPSVSAGS FALDGERELT
301 FSETCDVSIR LQTDAFRTVN VPDCMAYAAR HGLLTRAASE ALRSAHQTGR TT
SEQDB ID: 3101377GPV
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPFHKNADQH GRWKHTELTI DAIKGIGGMF SLENGSGRRF LTRSDICLTE
SEQDB ID: 3101377GPW
Reference:
3101377
Name: RNA polymerase sigma54 factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoN
Sequence:
1 MPQFQRQIQT QAQKLALTQA MRASLSLLSM DADEAAEAIR REQSRNSFLR TVPPPLPGGG
61 GAADQPEIAH MESGTEDLLR QVALIRMTTR QNQLAQDLVH SLDERGFLPD SPEETASYLQ
121 CSPAELSALV PILQDAVEPA GVFAWSLADS FRLQLQAKNR FDPLIERLLC RLDLIARQDI
181 DGICKACDVD REDAIEMLED IRSLNPSPLF RQSHPIQASG EPELIIKTAP DGTCTASLNE
241 AALPRLLTDD ALFSSTMAAE TDAHAQSYYR DCYRGAANMV RAMQKRANTL LSAGQTIADR
301 QHKFIRSGRL RDKQPLTMTL IAQEAGLNKS TISRALSNCR IRLDSGIFPA EHFLARPLSD
361 DTPDRTRDQV LQRLRLLIET ENPRSPMSDQ VLARQLGKAR LSISRRTVAK YRQFLQIPGA
421 YERKRNT
SEQDB ID: 3101377GPX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSASGGSNR MTETDLRAFT NDLALATDGT GALDALCRFA QSLLPARLFT ITLIDLDAGQ
61 ALRVYSNMPQ SYPVSGRKPV TRDVWFQQVI EGQHSFVANS GAEIAAVFPD QPLIASLGCD
121 AVVNLPVVLG GRTVATVNLL DRAQSYPAMV LARIETELRL PAMATLAVYY MLEGSAPDR
SEQDB ID: 3101377GPY
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRPDTASLA TVSQPFIEDW LSALRRCCAK AEMAGFLDRS GLGAIHDQPG ARVTLDQIVR
61 LYKIAAVETG DEMTGLWSRP IRHRALQHLL ATVRESGSLP SALHRFSTFW NLLLDDFQFE
121 LHTGVAQIDL VLLPLGDGPV QRFGHMLILK LAHGLLSWLA GHEVPVRAVH FAFERPGFAQ
181 DYSVIFPAPV HFGASASGLS FDPAQLSPPQ ARSSAEMDAF LARAPRDWIF TSYHEHSQSL
241 RVRAFLFRSD WVGCSLSDAA QALGMSRRTL TRRMEEDGTS FQAIKDALRR DIAIRDLREG
301 RKSIEEISQD VGFSSAANFH RAFRRWTGST PRSYRSGADP SNM
SEQDB ID: 3101377GQ
Reference:
3101377
Name: flagellar biosynthetic protein, Isotype: FlhB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flhB
Sequence:
1 MSGQDDDSDK SYEPTPQKLQ KAREKGEVAK SADLSVVAAY AGLLLALSAL GAASITKLGT
61 ALTVLIGQAD GLSRLVFEGR AVGPVGGLMG TVGASILPWF LVPAAAVILS VVAQRAFVMA
121 PSKLVPKISR ISILQNAKNK FGRGGLFEFA KSFVKLLLYS VCLGFFIKLN LSDIVSSAGM
181 EARQSVLLMA RLLMRFMFLV ATVALVIGAI DYLWQHAEHI RKNMMSRKEL MDETKDAEGD
241 PHMKQKRRQK GQEIAMNQML ADVPGADVVI VNPTHYAVAL KWSRLPGAAP VCVAKGVDEV
301 AAAIRRSAAE AGVPIHSDPP TARALHAGVE IGQEISEEHY RPVAAAIRFA EAMRKRAKGR
361 AW
SEQDB ID: 3101377GQA
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTYQAPVRDI MFAIEHLSQW PQVEALQTYS EIELDDARAA LEEFGRFCGE MIAPLSTIGD
61 TEGARLENGR VVLPEGYKTA YDQFVDMGWQ SLSHPAEHGG MGLPKVVGAA ATEIVNSADM
121 SFGLCPLLTN GAIDALSITG SDAQKAFYLD KLITGRWSGT MNLTEPQAGS DLSRVRCTAV
181 PQDDGTYAIS GTKIFITFGE HDLSENIVHL VLARTPDAPE GVRGLSLFVV PKLLAGEGGE
241 TSQRNTLGCV SLEHKLGVRA SPTAVMEYDN ATGYLVGEEN SGLRYMFIMM TSARYAVGVQ
301 GVAIAERAYQ HALSYARDRI QSRPVDGSAQ DAVPIIQHPD VRRMLLRMRA LTEGGRALAI
361 ATGGWLDLAE HGPEEARAEA QSMAEFLVPL VKGFCTERAV EVASLGVQIH GGMGFIEETG
421 VAQFYRDARI LPIYEGTTAI QANDLLGRKV LRDGGRTARR FAEMIAATEG ELSKGGAAAQ
481 RIAQRLAEAR AAFAAGLDHL LATAGQDPNR AYAGSVPFLM LTGNLATGWQ LGLSALAAEA
541 ELAKGGDAEF LQAKIATADI FAQQVLVECS AEHSRITDTG DSLLTASL
SEQDB ID: 3101377GQB
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQDVTSGYS NLDLDLRDNG VCVVTLNRPD KRNALDVATI EELVTFFSTA HRKGVRAVVL
61 TGAGDHFCAG LDLVEHWKAD RSADDFMHVC LRWHEAFNKM EYGGVPIIAA LRGAVVGGGL
121 ELASAAHLRV MDQSTYFALP EGQRGIFTGG GATIRVSDMI GKYRMIDMIL TGRVYQGQEA
181 ADLGLAQYIT EGSSFDKAME LADKIASNLP LTNFAICSAI SHMQNMSGLD AAYAEAFVGG
241 IVNTQPAARE RLEAFANKTA ARVRPNS
SEQDB ID: 3101377GQC
Reference:
3101377
Name: SsrA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: smpB
Sequence:
1 MAKKISDPNY KVIAENRRAR FDYAIESDLE CGIMLEGSEV KALRGGGSNI ADSYAAVENG
61 ELWLVNAYIP PYEQAKMFKH EERRRRKLLV SRKELANLWN ATQRKGMTLV PLVLYFNHKG
121 IAKMKLGIAK GKKIHDKRET EAKRDWNRQK QRLLKDNA
SEQDB ID: 3101377GQD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNMSPPSPFS AGQAPTQVAF DRREMAVILG LYGRMVAAGE WRDYGISMLS DMAVFSVFRR
61 TAEHPLYRIE KRPRLRNRQG MYAVVGMDGQ VLKRGQDLTS VLRVLERKLI RVVRPD
SEQDB ID: 3101377GQE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGGWAMLPEL TSERFTTQTG WRVLVQVPEP DCPRVIAAVI AEDPLIWGDY DRVTFAAPGQ
61 QHFRSLPGGA NTPTDDAVSV PCLELSFFLS GDAGRLDPVL HAIYRVHPYE EPVILVLPAL
121 RTNHIRGVDE GNPNRFWNRE TADWVPDAHR RDVAGPPQSR GTVSRQA
SEQDB ID: 3101377GQF
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLTPRLDIL GAALADSSRA RMLCELMDGR AYTNKELASA AGVTPQTATA HLRRLEEAGL
61 IRATRSGRCL YHSIAGPDVA EALETLSALA PSDHLYRVQQ RKGARLKMLE ARSCYDHLAG
121 RLGVAIAQAL LELGDLARDG AQYRVVPSER WAKLGVTLTG RAPLARPCLD WTERLPHVAG
181 PVGREVLSHA LSANWLRRVR GERGLEVTPA GAVALRQILG IRWEGGQCYQ N
SEQDB ID: 3101377GQG
Reference:
3101377
Name: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, Class: EC5.4.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gpmI
Sequence:
1 MNAPKPVVLC ILDGWGLSDD KTANAPYLAK TPTFDAIMTK GPHARLITHG PDVGLPSGQM
61 GNSEVGHTNI GAGRVVAMDL GQIDLAIEDG SFFDNAALRD FIARTRAAGG TAHLMGLVSD
121 GGVHGHLNHI IAAAQAITNA GVPVVMHAIT DGRDVAPKSA YGFMAELEDR LPKGARIVTV
181 TGRYFALDRD NRWERVQEAY DAMVRGEGRR VSTAHSAIDY AYNQSESDEF ITASVLTGYD
241 GMRDGDSLFC LNFRADRARE ILRAIGEPGF ADFDTGARPA LSALLGMVEY SDAHNAYMTT
301 VFPKRDIVNT LGAWVARHGL RQFRLAETEK YPHVTFFLNG GKEEAEPGED RFMPKSPKVA
361 TYDMQPEMSA PEVTDKFVEA IGAGYDLIVT NYANPDMVGH TGDLKAAIKA CEAVDQGLSR
421 VIAALEQAGG AMIVTADHGN CEMMIDPETG GPHTAHTLNP VPVALVGGPA GVTLRDGRLS
481 DLAPTVLALM GLPKPPEMTG ESLIT
SEQDB ID: 3101377GQH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRHAALFLA LTLWSGTARA ESDPAEAAQA AARMLEEASV ALSEAESARD RVRALTGTVQ
61 AYEAGLAAMR DGLRRASVRE GQLATELRAR EGEVAQLLGV LQTIETAPPP VLMLHPSGPL
121 GAARSAMTLA EMTPALQARA NALGRDLNEV RTLRTLQQNA ARTLQEGLTG IQQARAELSQ
181 AIANRTDLPR RFTEDPVRTA ILVSSTETLQ GFASGLSEIA EGEIAASSAD ISDLKGSLPL
241 PVQGVLLRRS GQADAAGIAR SGIIVATRPR ALVASPTAAT IRYRGPLLDL GNVVILEPQP
301 DLLIVLSGLQ EVYGAAGEVI PAGTPVGLMG GAAQEIGAIL STSGDGSGTE RSETLYIEVR
361 EGDSPVDPET WFQTDKDG
SEQDB ID: 3101377GQJ
Reference:
3101377
Name: C-terminal protease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKVVLAGLA GTLAGIIATT QIAGPLVAQE AKANSNVYEQ LDLFGDIFER IRAQYVEEVD
61 AGELIEAAID GMLTSLDPHS SYLSPDDAAQ MRVQTRGEFG GLGIEVTQEE GFVKVVSPID
121 GTPADEAGIE AGDFITHVDG ESVLGLTLDK AVDLMRGPVG SEIVITVVRE GEDEPFDVSI
181 IRDTIKLTAV RARTEGTSVV LRVTTFNDQT YSNLEDGLAK QVEAAGGIDK INGFVLDLRN
241 NPGGLLTQAI KVSDAFLDSG EIVSTRGRNP EDGERFNATL GDLAQGKPVV VLINGGSASA
301 SEIVAGALQD HRRAIVVGTK SFGKGSVQTV MPLRGDGAMR LTTARYYTPS GRSIQALGVS
361 PDIVVEQPRR RPEAEEERVT PRSRSEADLR GRLNNDSLSE DEIRQIEEDR AKAEATAELR
421 QEDYQLAYAI DILKGLSAFA PAD
SEQDB ID: 3101377GQK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRGDRMSDLT LTKIRLRNGA WEGRLTGAPT TGKRPDIRVT HLDQPVPDVE LVEGTDSSFW
61 TLTIPVPDYA IADGVQTFLI VDGETETKLG DFTLIAGESV PDDLRAEVEL LRAELDMLKR
121 AFRRHCLETS
SEQDB ID: 3101377GQL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRVLDRLFH LREMRRWRRA ARNALSTPLS ELRGQRNRAR DLRTHLDRLI NVADGRLALP
61 LIGSSFFPKP HGTDWSWRPE LWRGPLASPG LSSVPTRSTL GGEVTLFHDC EFSELTLRQL
121 RNLREADLAP YGLRMDVFKF DGSFLSLVID LPETAAEGMT RAHLLRVDTI IESEKPLEIF
181 ARLNIRHGPN TEQIVRELPL HEQDVMVEFD LAYSRLNEKR IEKIWLDLIF EAPEMNQVIL
241 RDLTFCRHRR AAL
SEQDB ID: 3101377GQM
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMEPSLFSFI WKHSKRQQIV LLALTVISFP FLYATLELPK QIINDAIGAQ TDRIDLWGLE
61 LSQIEYLFAL CLAFLAMVIA SGLMKMKINT MKGVLSERML RRLRFQLIAR MMRFPRSYYS
121 TTSQGELVSM ITSEAEPMGG LMGDAVAQPV FQAGQMLTIV TFLFMQNVWF GLASVALIPL
181 QAWLIPRLQR QINLLNKARI QQVRHLSSEI GESAAGIADL RTNGGWRYRL AQITDRLGRL
241 YDIRFRIYQK KFFMKFLNNL ISQMTPFLFY SVGGYLAIKG QITVGALVAA LAAYKDLSSP
301 WKELLTYYNQ VQDMSLRWQV VTERFAPQGM IPAELFEGEP KEIPRLTGAI ELRDVTVRDQ
361 DGNTILEDID LTIPPGARVA IQSDRPAERA ALAQLLTREI VPSRGEVVIS GYPLSTLHQA
421 VIAARIGYAH SRPYLFDGTL GDNLLMPLRT RPQSDSLAPT RPGRRQIEAV EAGNSGDTLD
481 ADWIDPGLAG LSDGDQIRDW WFQLVEAMGL DEFMFRRTLR SRIDSRLHES LAAEIVAQRD
541 TVARRLNQRG LAEMVHRFHP DRFNPAVPLG GNLLFAAPVR EISQEQLVGD GRFIQMLRNE
601 GLADEAMSIA LGVVATLRQT FGRDGTQHPL FRRIGMEDAV YLRLLDIADR QAAGGTEALS
661 DEERAQLMTV PFLLTAEQIG PTFPEEYKDK ILAIRRDRAS RLRTLVGSDF VAVDPQVYIP
721 RLTVLENALF GRVSIVAGAQ AEAIEDTVAE VLAEAGLRRR IAAIIYDLPA GLGGANLPTV
781 FQERAAFSRA SIKRPDILIL DNALASHDSE SRLRTRQRLR ELLPRAIMIF MEDRFANPEA
841 YDLFIEIKQG RIDGVTRAQP DLAAGAAADL DRKLKIIAST PLFTRLDARN QRLLAFSAQW
901 YRASAGQVIF SSGQTADAAY LCLSGRAALR WPEDAPGERP ITLVEPGRLI GDLSIITRQP
961 RPMDLVAETD SRFLRIGAEE FRAVIEHDAG VSLHLLQTVA GHLVEAGDIL RAARINITDF
1021 TDQSLRPVPR PENTKARDA
SEQDB ID: 3101377GQN
Reference:
3101377
Name: CAAX amino terminal protease family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMPDRPAYTP HEQLVAPGRA RPELWRLIAG LIAIGVIVMA ANMVLYGAVN TLASPEWAAG
61 FTSGTTPDGL LVLLGSFGFV IVGVGVAACL FQHRAPLGIL GPPRLALRQF WQVFRLLLVL
121 GVLLLILPPY DMGAPLKENL PPGRWLLLLP LSILALLIQT GAEEILFRGY VQQALAARFR
181 SALIWMVLPS VLFALGHYLP QEAGGNALPI ALWSGVFGIL MADITARAGT LGPAIALHLF
241 NNMIALLIVS LPDSLSGLSL YLLPYSMADT EHLRAWLAVD FATMFVTWLL ARLALRR
SEQDB ID: 3101377GQP
Reference:
3101377
Name: Ac-CoA carboxylase, Subunit: carboxyl transferase beta, Class: EC6.4.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: accD
Sequence:
1 MNWITNYVRP RINSIFSRRE VPENLWQKCD ECGTMLFHRE LADNLNVCTQ CGHHMQITPR
61 ARFQALFDGG IFTEVEVPEP VADPLHFRDQ KKYPERMKAA QKGTGEKEAM LVASGEIGRT
121 PIVAAAQDFS FMGGSMGMYV GNAIIAAAQK AVDLKRPLIL FSAAGGARMQ EGILSLMQMP
181 RTTVAVQMLK EAGLPYIVVL THPTTGGVTA SYAMLGDVHI AEPNALICFA GPRVIEQTIR
241 ETLPEGFQRA EYLLDHGMLD RVIKRTDLRE ELITLTRMLL NLPPAVRGDL PPPEAATPET
301 AKEQTAPSEA PAKS
SEQDB ID: 3101377GQQ
Reference:
3101377
Name: folC bifunctional protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: folC
Sequence:
1 MTNPGSDVIL QRMLALHPKI IDLTLDRVWR LLAALDNPQD RLPPVIHIAG TNGKGSTQAM
61 IRAGIEGAGL SAHAYTSPHL ARFHERIRVA GELISEPDLV AVLDECYAAN GGETITYFEI
121 TTCAALLAFA RTPADYTLLE VGLGGRLDAT NVIARPALSI ITPISMDHEQ FLGDTLAKIA
181 GEKAGIIKRD VPVVSGPQPD EVLEVIEATA ARLGAPLLAH GQHWHVRQER DRLIFEDETG
241 LCDLPLPNLL GAHQIENAGA ALAALRHLNL GEAACEAAVT RAHWPARMQR LKTGPLVQSA
301 PIAELWLDGG HNPAAGVALA TLLASRPGRP THLICGMLNT KDVTGYLRPL SAQAGSLTAV
361 SIPGEANTLS AEQTAVAAQS VGLTASTAPD VATALARIVA AEPDARVLIC GSLYLAGNIL
421 RENG
SEQDB ID: 3101377GQR
Reference:
3101377
Name: ATPase, Isotype: AFG1 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAVSALYAT RVAEGTLQAD VAQEAALAEF DRIHEALSTP VKRGLFRKAP PPPRGLYLWG
61 GVGRGKSMLM DLFVEVLGET VPVRRVHFHA FMQEIHAGMH AARAKGVADA LAPVAEAVIR
121 SVKVLAFDEM QITDITDAMI VGRLFEALFA AGVVVVNTSN RVPDDLYKDG LNRQLFLPFI
181 ELIKERMRVW EMISPTDYRQ NRLEGARVYF TPIGPAARGE IEAIWRDLTG GAGGPLILKV
241 KGRDVELPAF RNGIGRASFY DLCGRMLGPG DYLAIAEAVK VLVLEDIPRL SRNNFNEAKR
301 FVTLIDALYE ARVRLICSAA AEPEMLYVEG EGTFEFERTA SRLREMQDKE WGK
SEQDB ID: 3101377GQT
Reference:
3101377
Name: transmembrane transporter, Isotype: major facilitator family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDRSARLINP ILIVSCIIIT VSFAVRASFG VFQIPIAEEF GWLRTDFSLA IAIQNLAWGV
61 GQPIFGAISE KIGDRKAIFL GALLYAGGMV LSAWSTTPLE HQIYAWAVGF GIAGTGFGVI
121 LAVVARASSD ENRSMSLALI TAAGSVGQVI GAPTAEWLLT FLPWQQVFIV FAVAVLALVL
181 TLPMLRAPAP SSKAELEESM GQILTRAFRD PSYTMIFLGF FSCGYQLAFI TAHFPAFVTE
241 MCGPILPGGV LHSMGITTTS ALGAVAISLV GLANIAGTLT AGWAGKHFSK KYLLAGIYTA
301 RTVIAAAFIL LPITPLSVIL FSVAMGSLWL ATVPLTSGLV AHLYGLRYMG TLYGIIFFSH
361 QLGGFLGVWL GGRMYDLYGD YTMVWWIGVG VGAFSAIVHL PIRENRAPLP A
SEQDB ID: 3101377GQU
Reference:
3101377
Name: Orn cyclodeaminase/mu-crystallin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIPHIPFAE GEAKLDWLEL TRALADGHTL PKAQIGDTFL YRDPDTMLTR SAWIDGLGIA
61 VKTANIFPRN PERGDPMING AVNLYSDHDG ALSALVDFHL VTKWKTAGDS LLAALRLADP
121 DAREVLVVGA GTVGLSLCEA FGAGFPKARL KMWNRTRSKA EEVAARYAGL EVVDDLAEAV
181 NRADIIVTAT MSSEPVIRGE WLRPGQHLNL IGAYRPDMRE ADDEAMRRAR IFVDSVDTTL
241 DHIGELMMPL ADGVITRADV VADYYDLDAF KASRDDITLF KNGGGAHLDL MTSRYILDKW
301 QG
SEQDB ID: 3101377GQV
Reference:
3101377
Name: HAD-superfamily hydrolase, Isotype: subfamily IA variant 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIEAVIFDI GNVLIEWQPE RYYDRVLGEE RRRQMFAEVD LHGMNDLVDQ GHHFTDTIYD
61 WAEKYPDWRD EIRAWHDSWI ELATPEIPHS VRLLRALRNK GVPVFALTNF GVQNFDYACT
121 VYPFLTEFDR AYVSGRMQMV KPHAPIYAAV EADCGLAPAA LLFADDRVEN IEAAQTRGWQ
181 VHHFTGPQGW AARLVAEGLL TEGEAA
SEQDB ID: 3101377GQW
Reference:
3101377
Name: ribosomal protein L23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplW
Sequence:
1 MSAKAQHYDV IRKPIITEKS TMASENGAVV FEVSIDSNKP QIKEAVESLF GVKVKAVNTT
61 ITKGKVKRFR GQLGKRKDVK KAYVTLEEGN TIDVSTGL
SEQDB ID: 3101377GQX
Reference:
3101377
Name: ribosomal protein L4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplD
Sequence:
1 MKLDVIKLDG TKAGNIDLDE ALFGLEPRAD ILHRVVRWQR NNAQAGTHKV LTKSEVSYST
61 KKIYRQKGTG GARHGSRKSP TFRHGGVYKG PTPRSHGHDL TKKFRKLGLR HALSAKAKAG
121 ELVVIENAEA EGKTAALAKQ VANLGWKRAL VIDGAAVNEG FARAARNIEG LDILPSMGAN
181 VYDILKRDTL VLTKAAVEAL EARLK
SEQDB ID: 3101377GQY
Reference:
3101377
Name: ribosomal protein L3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplC
Sequence:
1 MRSGIIAKKV GMTRLFMEDG KQIPVTVLQL DNLQVVAQRT TEKDGYTAVQ LGAGTPKIKR
61 VSKAMRGHFA AQKVEPKRKL AEFRVSEDAL IEVGAEISAE HFLTGQKVDV SGTSIGKGFA
121 GAMKRHNFGG LRASHGVSIS HRSHGSTGQC QDPGRVFKGK KMAGHMGAAR VTTQNLEVVK
181 TDAERGLVFI KGAVPGPKSG WVTVKDAVKK KAPEGLPFPA AVKSAATEAP VAEAPAEGGE
241 A
SEQDB ID: 3101377GR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRHSILDQM TRVGEALYLR EYERIRAVLE EEARIAAQIA RLDDQVVRIR AEGSGDHGYR
61 SVGADILWQS WESRTRRQLN SDLARARAKR LSMMDDLKRA FGRKQAIAQI AQDDKSARAK
121 ARRKAQLDAL TRDAALR
SEQDB ID: 3101377GRA
Reference:
3101377
Name: ribosomal protein S10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsJ
Sequence:
1 MQSQNIRIRL KAFDYRVLDA STQEIVNTAK RTGAQVRGPI PLPNKIEKFT VLRGPHVDKK
61 SRDQFEIRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KLQS
SEQDB ID: 3101377GRB
Reference:
3101377
Name: YaiI/YqxD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTLYVDADA CPVRAEAERV ATRHRLRMAV VSNGGLRPSQ NPLVETVIVP DGPDVADQWI
61 AERAGRGDVV ITADIPLAAK CVEAGARVLR HNGEAFTPAN IGQQLAMRDL MADLRAANPL
121 GAGGGGKPFS KADRARFLDA LEREIRAAQR DAQG
SEQDB ID: 3101377GRC
Reference:
3101377
Name: soluble pyridine nucleotide transhydrogenase, Class: EC1.6.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sthA
Sequence:
1 MSTFDYDLII IGSGPSGRAA AIQAGKLKRR VLVIDRKDRL GGVSVHTGTI PSKTLRETVL
61 NLSGWRERSF YGRSYRVKDR ISAEDLKARL HMTLDYEVDV LEHQFNRNHI DTLNGLARFV
121 GPHEIEVATE AGDTTRLTAA KFLIATGTKT YRPDYVPFNG KTVVDGDDFL EMERIPRSLA
181 VIGAGVIGVE YASMFSALDV RVTLIEPRET FLDFIDRTLI QEFTHQIREN GVDLRLGSAV
241 EKIEDTGSHI EISLANGRHI RAEMLLFAAG RMGATSALNL DAVGLETDHR NRITVDRKTY
301 QTSVPHIYAT GDVIGHPSLA STSMQQGRVA ACHALETPTL PESPWFPYGI YSVPEMSTCG
361 MSEEELQERG IPYEVGVARF RETSRGHIMG LEHGMLKMLL SLKTRRVLGV QIVGEGATEL
421 IHIGQAVMNL KGTVDYFVQN TFNYPTLAEA YRTAGLDAFN RMPIPEEFKV KKPKK
SEQDB ID: 3101377GRD
Reference:
3101377
Name: S-formylglutathione hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEKDRVMIET VSENACFGGV QGVYRHASAA TGCDMTFGLF LPAEAKDGPV PVLWYLSGLT
61 CTHENAMVKA GAQGWAAEQG IALVFPDTSP RGEGVADHAD YDLGQGAGFY VNATQEPWAP
121 HFRMWDYVAE ELPALVAEHF AIDPTRQAIT GHSMGGHGAL TLAMNLPGRY RSVSAFAPIS
181 NPTGSDWGRK QLNAYLGTDE AAWAKHDATL MMQQAGFDGP ILIDTGTSDQ FIDLLRPEAL
241 AAAIAERRQQ ATVRLQPGYD HSYFFVSSFM EDHVSFHAEA LYRD
SEQDB ID: 3101377GRE
Reference:
3101377
Name: peptidase, Isotype: T, Class: EC3.4.11.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pepT
Sequence:
1 MQNQFDKELQ DRLVRYAAID SQSDESVPTS PSTACQFDML HLLRDELVEM GAQDVELTEY
61 GVVLATIPGT APGPTVGFLA HVDTAPQFNA SGVKPRVIGG YNGGDITFPD DPALVLSPAE
121 HPYLAEKIGH DLITASGTTL LGADDKAGVA IIMTMARHLL NSPDIARGPI RVAFTPDEEI
181 GHGVNERLPA DLRADFAYTL DGGQVGEIEY ESFSADRAVV TVTGVSIHPG WAKEKMVNAI
241 HLAAKIVQTL PQATMTPETT DGRDGFIHAT DMEGGSSEMV IKFILRDFER DGLAAKGELL
301 RQVCAAVQAG EPRAAIKCEI YPQYRNMRYW LEKDMTPVEL ARAAAEAEGV APISVPIRGG
361 TDGSRLTEMG VPTPNIFTGM QCIHGPLEWI SVQDMATATR TCLRLAQMAA KG
SEQDB ID: 3101377GRF
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGERNLTEER DKFAALHPEA RHVVHGRDWG VIRVGQSGPA LVLIPGTLGR ADIFWQQIAA
61 LSGEARILAV SYPASGGISD WAADLAQIIS DAEMQGATIL GSSLGGYLAQ YLTATEPALC
121 GGLVAANTLA SVRGIDQVPP YALDLATTPI DDLRAGFEAG LASWQAPDHP YSDLARLLLQ
181 EVRTRIPEGE LRARLQALKT APELPAQSLP RDRMFTVESD DDHLISPPMR SALRAALTPA
241 RAYRFRATSH FPYVTRPDAY TALLREVLGL TGDHAIWPAG EESLS
SEQDB ID: 3101377GRG
Reference:
3101377
Name: Orn cyclodeaminase/mu-crystallin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKIISAEEIR QHLPMRDAIE VVEKTMIQVS QGKANLPLRT VMDINGTNRL GVMPGALSDP
61 TLYGIKVLSL FPGNPAKGLS SHTGTVLLFD AETGQPRAAL DADAITAIRT AAATAVATRA
121 LARSDAQVLA LIGTGEQAES HIEALTLVRE IAEIRVAGRN PERAAAFVRR MADHYPGITF
181 TAATDVEQAV SGADIVCTLT SSPSVVLHGD WIGPGTHVNA VGASIPSMQE IDETLLLKSE
241 LFVDYRPSAF AQAREIISAL ETGAMSEAHV RGEIGEVLSG KIPGRSGTDA ITLYRSLGIA
301 AQDLACADHV CRTIG
SEQDB ID: 3101377GRH
Reference:
3101377
Name: ATP-dependent RNA helicase, Isotype: DEAD/DEAH box family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKCASLRYM AQSLRRGESR ALLDIPLMTS PLLDALAERG FDTLTDVQQA VTDPELASAD
61 LLVSARTGSG KTVGFGLAIA PTLLGEAETL GPPAAPLALI VAPTRELALQ VSRELTWLFA
121 KAGGRIATCI GGMDARTERR TLERGAHIVV GTPGRLRDHI TRGALDLADI RAVVLDEADE
181 MLDLGFREDL EFMLGEAPED RRTLLFSATV SPAIAELAKT YQRQAARIST LGGERQHSDI
241 SYQAVQVSGG DGEHAIINLL RFHDAPTAIV FANTRAAVAR LTARLANRGF AVVSLSGELS
301 QDERSHALQA MRDGRARVCV ATDVAARGID LPNLDLVIHA DLPTNTEGLL HRSGRTGRAG
361 RKGISALIVP DKISKKASRL LKWAKIEAEW TQAPTPEDIL AKDEARLLAD PLWTDPVEDE
421 ETRIAAGLME QFTAQQIAVA CLRLYRAKLT APEELNQPPA RGAPSVAASF GPSRWISLSV
481 GREQRAEPRW LLPLLCRAGN LEKSQIGKIT MQAQETHVEL AEAAVQGFLD QIGPSGVVEG
541 EITARLLDGV PEMTRGPQGK PRPRSDRPAA KPFKPAKPRH KADRDSAAPA AEPRPFRERE
601 ATPAPAKPRR AREDGADRPA KPARATLHAG KSEKPYKPRK PASGPGVKPS SKPGGKPSDK
661 PGGKPWAKPG AKPGVKPGGK KPGGKPTAGA SRPAAGRPGG EAPPKRKRD
SEQDB ID: 3101377GRJ
Reference:
3101377
Name: dihydrodipicolinate reductase, Class: EC1.3.1.26
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dapB
Sequence:
1 MTHIPGIVIT GASGRMGQML VRTVTDSDKV RLVGALERPG HDWIGRDVGE AMGGQALGVA
61 VTDDPLEAFA QAQAVIDFTA PAATLGFAAL AAQARCVHVI GTTGMTAEQI AALEPAARHA
121 VIVRAGNMSL GVNLLVQLTK KVAAALDEDF DIEVIEAHHH HKVDAPSGTA LMLGEAAAEG
181 RGVRLDDVAD RARDGITGAR TRGDIGFHAI RGGDIVGEHD VLFAAPGERI VLRHVASDRA
241 VFARGALKAA LWGQGKAPGH YDMVDVLGL
SEQDB ID: 3101377GRK
Reference:
3101377
Name: ribosome-binding factor, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rbfA
Sequence:
1 MAKNKFHDGP GPSQRQLRVG EVIRRTLSEV LARGDVHDPD LNRMSITVGE VRTSPDLKIA
61 TAYVLPLGGR GQEDVVQLLS RNKGELRRMI GKKLGLKFTP DLRFRLDETF DRLDDTRRMF
121 DQDAVRRDLD E
SEQDB ID: 3101377GRL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRAAAVLFL LGVAGQAAAV DCRDLTHEGN LYTVCEVDAR TADLRLFLND VEGAPLGQFS
61 TVDQTLQTEG KRLAFAMNAG MYHDDRSPVG HYVEDGIEQK RVIANAGPGN FGLLPNGVFC
121 LRSGRADVIE TLDYQAAKPD CRFATQSGPM LVIDGALHPR FLPDSTSRYI RNGVGTSADG
181 ARAVFAISGN SVTFYEFGTL FRDVLKTPNA LYFDGNISRL YAPSLNRADL GFSMGPIVGV
241 AVEDR
SEQDB ID: 3101377GRM
Reference:
3101377
Name: tRNA pseudouridine synthase, Isotype: B, Class: EC4.2.1.70
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: truB
Sequence:
1 MARKRKGRDI SGWLVVDKPA GMTSTAVVNK VRWALGANKA GHAGTLDPEA TGVLAIALGE
61 ATKTVPYITD ALKAYVFTVR LGQATNTDDA EGEVIASSDL RPTDEQIKDA LAPFLGDIMQ
121 VPPKFSAVKI DGQRAYKLAR DGEDVELAAR PLWVEELLML DRPDPDHVLL EMTCGKGGYV
181 RSIARDLGAA LGCYGHVREL RRIWSGPFEA EDGITLEQVE ALAKTPELDS YLRPLEEGLA
241 DLPELKCSPE GAQRLRNGNP GMVYPGEAEY GDEAWASFEG RAVAVGIYKS GELHPARVFA
301 RPE
SEQDB ID: 3101377GRN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITRSHTKGD APSTAVYSDC ERYRYSLTRI WDPAGRKALF VMLNPSTATE VQNDPTVERC
61 ERRARTLGFG AFQVTNIFAW RDTDPRKMRA AADPVGPEND AAILAGAEWA DQIVAAWGTH
121 GAHLERGLAV ERLLRGTGLP LFHLGLTKDG HPKHPLYIGY AQQPSPWS
SEQDB ID: 3101377GRP
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGYFPTGVTC VWSSGMLMLA GLLGLAAVSG VVLMTGGGED DADEELLPAE DQQLEVETTE
61 TLGMISGGGA QQPLLMSDAI IPSDGLVLSG GSEGDVLTGQ EGNDQINGYD LNDSIAGDDG
121 NDTLHGAGGD DDIRGDDGFD LLHGEDGDDS LDGGAGNDNL FGHFGEDELQ GGAGDDTLYG
181 GQDNDQLDGG ADNDALHGGY GDDTLSGDAG QDTVFGGFGN DLILGIEGGP GNPISPVAQE
241 VDYLNGGQGD DTIWAGAGDI VTGGDGADNI VAGDWANDGD AIEVMDFDPD EDRLMVVWDG
301 PEGQSPQIEI SKDPENPDIS RVTVDGHDVA LLRGGEPDDV NDIVLVRPGD LPLTGTAA
SEQDB ID: 3101377GRQ
Reference:
3101377
Name: ribosomal protein S15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsO
Sequence:
1 MSITTEEKAR VMKEYGTKDG DTGSPEVQVA ILSSRIATLT EHFKTHKKDN HGRRGLLKLV
61 AQRRKLLDYL KAKDEARYQS LIERLGLRR
SEQDB ID: 3101377GRR
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTQAATILRT GRKFDQVLRG AREVFMSDGF EGANVDDIAR AAGVSKATLY SYFPDKRLLF
61 VEVAQTECQL MAERILSMID EDRPVREVLT ITATQLVAFL ISDFAQQVFR ICLAERERFP
121 ELARAFYAAG PENGQRQICE YLEKAVTKGE LVIADIPMAA EQFSELCKTR LWTRAVFGIQ
181 TRFTQAEIDE VALAAVDTFL ARYGA
SEQDB ID: 3101377GRT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFLSYRKHF RDLSEQEVIA LAISSEEDDA RIYRSYAEML RADFPATAKL FDGMAAEEDE
61 HRAQLIALHE RRFGAVIPLI RREHVAGYYA RRPVWLVENL GIERIRTEAA AMERDAERFY
121 LTAAARSTDA ATRKLLGDLA AAEAGHQATA SDLESTHLDD ETRANEDATA HRQFILTWVQ
181 PGLAGLMDGS VSTLAPIFAT AFATQDTWTT FLVGVAASVG AGISMGFTEA ASDDGELSGR
241 GSPVKRGFAS GIMTTLGGLG HALPYLIPDF WTATSIAIFI VFFELWAIAW IQNKYMETPF
301 FRAAFQVVVG GALVLAAGVL IGSG
SEQDB ID: 3101377GRU
Reference:
3101377
Name: malonate transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVEIFLRTLP FFVIIGLGFW AGRTRFFTPE ATAYLTKFVF FFALSAMLFR FAATLPFAEI
61 FNGQLVMGYL WGTAGVYGIA SLVAFLRKLD VPTAAVEAQC AAIGNVGFLG LPMLAMLFGE
121 AAIGPVMLVL SVDLIVFSSL IVILINGGRD GRLSLGTLRL IGMGLLKNPM IVSISAGLIW
181 SSLRLPIPAP LNDFLTILGG AATPGALFAI GASLAGRSAE RVQIAAWLSL CKLVIHPILV
241 ALAVLWVFPV DAFSASVAIA AAALPVAGNV YMLAAHYGVA PQRASAAILL STAVSILTVP
301 AFIAWVTSA
SEQDB ID: 3101377GRV
Reference:
3101377
Name: DNA polymerase, Isotype: I, Class: EC2.7.7.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: polA
Sequence:
1 MSTFGKGCHL HLIDGSAFIF RAYHALPPLT RKSDGLPIGA VSGFCNMLQR YVDGDHGPDA
61 PTHLAVIFDK GSHTFRNDLY DLYKANREAM PEDLRPQIPL TRAATEAFNI PCKELEGYEA
121 DDIIATLSNQ ARDAGGRVTI VSSDKDLMQL VGDGVEMFDA MKNKRIDRDG VFEKFGVFPD
181 RVVDVQALAG DSVDNVPGAP GIGVKTAALL INEYGSLEDL LDRAEEIKQP KRRQTLIDMR
241 AQIELSKRLV ELDANTPLDF TLDDLELRDP DPEKLLSFLA EMEFRTLTKR IADKLGAEAP
301 VIAEKASPEA EEAPQPEQPP FDASRYECVR DAAALETWIA QARERGWVAV DTETTSLNEM
361 TADLVGISLA VEPGAACYIP LGHRDGDAGD LFGSDKLAEG QLPLQQTLDL LKPMLEDPAI
421 LKIGQNMKYD AKIFARYGVA VAPIDDTMLL SYAMHGGLHG HGMDTLSERY LSHTPIPIKP
481 LLGSGKSAIT FDKVAIDEAT AYAAEDADIT LRLWQLFKPQ LHRAQVTTVY ETLERPLVPV
541 LAEMEMHGVK VDREVLSRMS NAFAQKMAGL EAEIHELAGE PFNVGSPAQV GEILFDKMSL
601 EGGKKGKTGK YSTPADVLED LATEHELPAR ILDWRQLSKL KSTYTDALQT HINPDTGRVH
661 TSYSITGANT GRLASTDPNL QNIPVRTEEG RRIREAFVAE PGNVLLSLDY SQIELRILAH
721 IADIPALKQA FADGLDIHAM TASEMFDVPL DQMTPEVRRR AKAINFGVIY GISGFGLARN
781 LRIPRAEAQE FIDRYFERFP GIRTYMDDTI AFAKEHGFVQ TLFGRRIHTP EINAKGPHAG
841 FARRAAINAP IQGTAADVIR RAMVRMPDAI RDLPAKMLLQ VHDELLFEVA EEAVEDTIAA
901 ARDIMEGAAD PAVRLDVRLV VDAGRGANWA EAH
SEQDB ID: 3101377GRW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTGARAIAV RSSMQYSKAG ILTESPMLPA RFAPVLFAAI MSGLMSCIVT CVATIRAVGM
61 DPGMAGKWMG AWVLAWPIAF VVLLFVAPLA RRLVAALVRS EA
SEQDB ID: 3101377GRX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIQAPETKI VDKSRVACDG GEGALGHPRV WLQIPEDTGW VECPYCDCKY VLKGSKADA
SEQDB ID: 3101377GRY
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEDAIRIEG LTKTYRGSHG QPEKQALKGI DLNVPRGSVF GLLGPNGAGK STLINILAGL
61 VTKTAGKVTI WGFDQDQNPR QSRAAIGVMP QELNLDPFFT PRAALEVQAG LYGVPRSQRW
121 SDEILAMIGL TDKAEAYART LSGGMRRRLL LGKALVHRPQ VLVLDEPTAG VDIELRQMLW
181 SNVRKLNAKG MTIILTTHYL EEAQEMCDQI AIINQGSVVA RDSTANLLGR LDARAMVIQP
241 DGPVSTLPQG PGIEAEARAD GTLALRYHNR QTSAEDVLAA VRAAGIHIRD VRTEQADLED
301 VFLALTSSR
SEQDB ID: 3101377GT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLGKLLPVLF LVVGLGAGVG AGVFLGPKPS QDSAHASDQA SDHGEEKPSK AKPGDQAKSE
61 PSEDHDAEDS GNEYVKMNKP FVVPLVHKDQ ISGLATVSLS LEVQPGFSEN FYAKEPKLRD
121 GFLQVLFDHA NIGGFDGAFT RPGNLDPLRV ALLESAQKAF GDNIVSVLIV DIARQDSY
SEQDB ID: 3101377GTA
Reference:
3101377
Name: sterol desaturase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDPDLIRFVA EESLRIVQRY LFFAAGAFAL FYLLLRRLMW PRKIQKRWPR LTDYGRDLAF
61 SLISVGIFAV ISSLIFFVFR DQTSIYGGSM GSRGWGYLVF TFVWMLALHD TYFYWIHRLM
121 HTRVLYRHVH LVHHHSTNPS PWTAYAFHPV EAVLEVGILP LIAFTLPVHW AAVMYFFIFQ
181 IAYNVYGHLG FELYPRGFHK HWLGRWINTS VAHNQHHGRF TGNYGLYFLF WDRVMGTLRA
241 DYDAAYEGAT GAAAPVTATK
SEQDB ID: 3101377GTB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRQESPMIR ITPLDTETVR AWQTGAPDAY GNPPERALSD GGGNPCRHCL RYIPQGAPML
61 ILAHRPFDGL HPYAETGPIF VCAEPCARHA GDEPLPEMLT NSPDYLIKGY GANDRIVYGT
121 GRVVPAADLS AGAEAILSRP DVAYVHVRSA RNNCYQARID RA
SEQDB ID: 3101377GTC
Reference:
3101377
Name: glutathione-dependent formaldehyde dehydrogenase, Class: EC1.2.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTRAAVAVE AGKPLEVMEV NLEGPKAGEV LVEIKATGIC HTDEFTLSGA DPEGLFPAIL
61 GHEGAGIVLE VGEGVTSLKP GDHVIPLYTP ECRQCEYCLS GKTNLCQAIR TTQGKGLMPD
121 GTTRFSMLDG TPILHYMGCS TFSNHTVLPE IALAKVRPDA PFDKICYIGC GVTTGIGAVI
181 NTAKAEIGCR AVVFGLGGIG LNVIQGLRLA GADQIVGVDL NPDKVAMATR FGMTDFVNPA
241 EVEGDMVAHL VELTRGGADY SFDATGNVGV MRTALECAHK GWGESIIIGV APAGAEISTR
301 PFQLVTGRVW KGTAFGGAKG RTDVPRIVDW YMDGKIEIDP MITHTLSLDE INKGFDLMHA
361 GESIRSVVVY
SEQDB ID: 3101377GTD
Reference:
3101377
Name: HemY domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLKILVFVAI IALLALGAGF LMEASGGVQI TVAGTEYTLG PLQSVIGFGL LVVAVWLFFK
61 LLTLLIATLK FLNGDETALS RYFDRGRERR GYQALTEGLM ALASGEGRLA MAKAARAEKL
121 LQKPELTNLL VAQAAEMTGD TKKAAETYRK LVTDQSTRFV GVRGIMKQKL AEGDDETARK
181 LAEKALALKP RHEETQDVLL TLQTRAQDWA GARATLTSKL KTGTLPRDVY KRRDAVLALS
241 EARDLLSETA SLDQQERAIE ANRLSPDLIP AAAMAARAHI AKGKPKNAAK ILTKAWQVQP
301 HPDLAHAFAE IAPDETPAAR IKRFAALAKA HPQHAETRLM MAELNIVAED FPEARRALGD
361 LLDHAPDARA YTLMAAIERG EGASDAVVQG WLARALTAPR GPQWVCDNCQ HIHAAWAPVC
421 GNCNSFDTLS WRAPQDTDAG AMTTANMLPL IVGAIEQKAP DVEEVDFETD ADSDDSVEGT
481 AKEVDGANEP VSR
SEQDB ID: 3101377GTE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNGIRYLKI FRFERDSAVA EKKDPELETV TDPMSETKQE LPEPAVDEAK AATEAPSEAE
61 AEAEAEAEAE AEAEAEAEAE AEAEAEAEAE AEAEAEAEAE AEAEAATPPE TAPQPAPTET
121 RRGGFAPALI GGIVAAVLGF LAGRADLIDP LLPPGLRASD GAEAIAALQS KLDQQQAALS
181 ALKSDIGKIE MPDISGLSAQ LGDLSAQLAP LATTAEDLSA RTDSQAQALS ALTARLSELE
241 ARPVAEGASP EVVAAYEAEL SRTREVLAAQ RAEVEQMVAD AQTLKATAAA DAQRAANRGT
301 LAQLRGQLEA GAAYAEPLAA LTAAGIDIPV ALSGPAADGV ASLAVLRDTF PPAARAALAD
361 LRQETRGTGL LAFLERQTGA RSVTPRAGDD PDAVLSRAEA AVTSGDLATA LDLVAALPEA
421 AQAALADWVA QASSRHQAIA AADALAQSLN SN
SEQDB ID: 3101377GTF
Reference:
3101377
Name: uroporphyrinogen III synthase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRPRGASER FVAGLRPEIR EALSVVYSPL LRIEPTVETL DFGPAAGLIF TSSNGVGIAA
61 RLSADRRLPC FCVGRATTRM AAQAGWSATM AGESAEALIA GLLAQRPDTP LLHLRGEHGR
121 GEVAANLTRM GLRTEERVIY AQRLLPFSDE ALAVLAGDDR VIAPLFSPRT ARQFAGLVRG
181 QAPLSVVAMS VAVAKPLENT PLSQVLTATA PDADAMRAAI ENLVTGAIRV EGRPGAH
SEQDB ID: 3101377GTG
Reference:
3101377
Name: O-sialoglycoprotein endopeptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQTLTILGL ESSCDDTAAA VVRQTEGQAA EILSSVVHGQ ADLHSAYGGV VPEIAARAHA
61 EKLDICVRQA LTEAGVSLTD LDAVAVTAGP GLIGGVMSGV MCAKGIAAAT GLPLIGVNHL
121 AGHALTPRLT DQIAYPYLML LVSGGHCQYL IAHGPEQFSR LGGTIDDAPG EAFDKTARLL
181 GLPQPGGPSV EGEARQGDPK RFRFPRPLLD RPDCDLSFSG LKTALMRMRD QLVGEKGGLT
241 RQDRADLCAG FQAAVVDTLA EKTRRALTLY LDEAPAEPVV AVAGGVAANA AIRAALETVC
301 AEAGARFTAP PLRLCTDNAA MIAYAGLERF RSGARDGLDL TARPRWPLDQ SSPAMLGSGK
361 KGAKA
SEQDB ID: 3101377GTH
Reference:
3101377
Name: glycerol 3-phosphate dehydrogenase, Class: EC1.1.1.94
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gpsA
Sequence:
1 MSIAVLGSGA FGTALAISLA GKGPVTLWSR APEQARQMQE TRENHQRLPG LPLPAALNVT
61 ADLDQATRCD TLLLAVPMQK LRGMLSEHAA ALHGRVLVAC CKGIELNSGL GPMAVMAETL
121 PGTRTALLTG PSFAQDIARG LPTALTLACA DPDLGRDLQA QLTTTNLRLY RTTDTIGAEL
181 GGALKNVIAI GCGACIGAGM GDSARAALLT RGFAEMQRLA ALKGARPETL MGLSGLGDLM
241 LTCSSDLSRN YRFGLALGRQ EPFDRATTVE GVATAHAVAQ LARDLGIDMP ISTTVAQLSN
301 GDYSVAEAMR SLLNRPLKEE
SEQDB ID: 3101377GTJ
Reference:
3101377
Name: YCII-related domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLVALIARDK DGALQTRLDN RAAHLAYIEE TGVVSQAGPL LDGDAMIGSL VILDVSDLAA
61 AEDWAANDPY AKAGLFQSVQ LIPWKKVIG
SEQDB ID: 3101377GTK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAYWLFKSEP ETWGWDDQVA KGDAGEEWDG VRNYQARNFM RAMALGDRGF FYHSQSDKAV
61 VGIVEVCAEV HPDSKSDDPR WECVDIRAVR PFQQPVTLEQ IKADPRLSEM VLVRNSRLSV
121 QPVTEAEWRA ICAMGQTDPD
SEQDB ID: 3101377GTL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELLNVLAAA FGAFALGSVW YMVLAEPWMQ DAKVPRGPDG RPEGGMTPGI FAASFVLQLI
61 VAGMMRHVFA LSGIDSPGAG IVAGIGVGLF FIAPWITLNN LYGMRPLRLS LIDGGYATLA
121 CAVMGLILTL F
SEQDB ID: 3101377GTM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKRDDLIAQ YADDLKNKCG MTPDMDLLTK VTIGCGPAIY DADASTVASS QPSELETVKN
61 NFLIKKLGLA DGPELDAAIA KVVDTYGKSE RNKYRAVVYY MLTKHFGKES VYG
SEQDB ID: 3101377GTN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWVEQIEKIL TPRTPLILRC RNVPIPLIVS VFVECDMFDE SLPISRAMKC LFVSVLCLSV
61 GATAADAKPK IKVVNKTYSV NATTAQDLIQ QMDARGPKGF WAYTDWYVKW TGGCDLSVSI
121 TYTMPKHKNE AKLDPELRKS WQSFVTALRK HEELHGAHGI QAAQEIEKSK CADGDSVIRK
181 WSEQDKVLDQ RTDHGKKDGV VLK
SEQDB ID: 3101377GTP
Reference:
3101377
Name: adenosylhomocysteinase, Class: EC3.3.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ahcY
Sequence:
1 MAGDYIVKDI SLAGFGRKEL DIAETEMPGL MTLREEYGKA QPLKGARIVG SLHMTIQTAV
61 LIETLVALGA DVRWASCNIF STQDHAAAAI AAAGIPVFAI KGQTLEEHWD YLDKSFLFDE
121 GPNMILDDGG DATLYILLGA RAEAGEDIIP VPGSEEEEVI KKQIAKRMAA SPGWFTKMRD
181 QIQGVSEETT TGVNRLYQLV KDGHLPFPAI NVNDSVTKSK FDNKYGCKES LVDGIRRATD
241 TMMAGKVAVV CGYGDVGKGS AASLRGAGAR VKVTEVDPIC ALQAAMDGFE VTTLEDEVAS
301 ADIFITTTGN KDVIRIEHMR EMKNMAIVGN IGHFDNEIQV AALKNHKWTN IKEQVDMIEM
361 PSGNKIILLS EGRLLNLGNA TGHPSFVMSA SFTNQVLAQI ELFTKGDQYE NKVYILPKHL
421 DEKVARLHLA RIGVKLTQLS PDQASYIGVK PEGPFKPEHY RY
SEQDB ID: 3101377GTQ
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKELAMFKP LLSALAGFGL ILSAGTATAQ SCAARDAIVD RLQQKYSERL AAGGLQPLSG
61 GASVIELWAS AETGTFTVLL TRASGISCIV AAGTDYFRTP DADPVPDIPS
SEQDB ID: 3101377GTR
Reference:
3101377
Name: HD domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATQPRAWQR MLSGRRLDLL DPTPVDIEIE DIAHGLAFVA RWNGQTHGEF AYSVAEHSLL
61 VEDIFARMVP GAGAKWRLAA LLHDAPEYVI GDMISPVKAA VGADYGLLDA RLTAAIHIRF
121 GLPAMLPIQI KKQIKRADRV SAWMEATRIA GFTEAEANRF FGRQKPELMQ GLDIRLRPPL
181 ETRAAFTARY EALISGV
SEQDB ID: 3101377GTT
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAQAPELDPN DPTTQPQPDG GWSEGLDRLS DAIVVPPEVS GFTQEAGVLH SDGRYCPQGA
61 LWRRYRPLTT EPPMPEKVSE VLSGRWLWGG VLWAHFGHFL VESTARLWAL NHIDGPIDGV
121 LFIPKRPRVG DQIRGFQRDF IDLMHPGLPI HVATDPIRVE ELIVPGQGFG LGPITQGTQK
181 FRDAIHAGFG KAVEPDGPSK IYISRSALGL GKGGMLGEER LEDLLRAEGY DIFHPEKYNL
241 ETQLARYKAA SHVIAADGSA LHLYAMVGRP EQKVAMILRR KAGATNLLAK NVAHFCRCNP
301 MVIDALYTEW VRGEGGKSNR LSFGELDHAV IGRGLAMGGF VRPDVDWSRA TDEERAQMFR
361 DKGLDQAGDF VESEEYRKRR RRIMRQERRA RRAATEDAPT DQTPEIKAS
SEQDB ID: 3101377GTU
Reference:
3101377
Name: photosynthetic apparatus regulatory protein, Isotype: RegA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: regA
Sequence:
1 MVDAPQPDIG PDKSLLLVDD DEPFLRRLAK AMEKRGFEIE TAGSVAAGRA IATARPPAYA
61 VVDLRLEDGN GLDVVEVLRD KRPDCRVVVL TGYGAIATAV AAVKIGATDY LSKPADATDI
121 TNALLATGDE LPPPPENPMS ADRVRWEHIQ RVYELCDRNV SETARRLNMH RRTLQRILAK
181 RSPR
SEQDB ID: 3101377GTV
Reference:
3101377
Name: regulatory protein, Isotype: SenC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: senC
Sequence:
1 MTRLYAFLAA VVAATALGAT WIATRGGDGN DRFAQCRAGQ IAGGAETIGG PFELVNAKGE
61 TVTDKDVITE PSLLYFGYTF CPDVCPLDTS RNAEAVDILE GRGQMVTPVF ISIDADRDTP
121 EVVGDFAANL HERMIGLTGS PEQVKAASQA YKTYYRAQDK SDEYYLVDHS TFSYLVLPEH
181 GFVEFFRRDE TAEKMADRVG CFLDAM
SEQDB ID: 3101377GTW
Reference:
3101377
Name: sensor His kinase, Isotype: RegB, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: regB
Sequence:
1 MPDSNMNLVL GQERSSWIRL RTMILLRWVA IAGQVAAILV AQHSYHLQLN LGLCYLAIGI
61 SAVGNLLAIF LFPENKRLGE FENFLMVLFD LLQLGFLLYL TGGLHNPFAL LLVGPVIISA
121 NVMGLRSTLF IGTTAIVLVT LLGLYHVPLR TEMGFILRIP DVFVFGHWTA IIIAIVFLGA
181 YSYRISSEVQ SMSEALAATQ MALSREQKLT DLGGVVAAAA HELGTPLATI KLASSELVEE
241 LDDRPDLRED AALIRQQADR CRDILRNMGR AGKDDLHLRQ APLSTVIHEA AEPHMHRGKT
301 VHFDEGPGAG GDLQQPSILR KPEVIHGLRN LIQNAVDFAR ANVWVEAEWT AETIIVSIMD
361 DGRGYPGHMI GRIGDPFVRR RRAEIDRRAR PEYEGMGLGL FIAKTLLERS GAELSFANGS
421 DPYQTLTKQA ERRGAIVQVV WPRAQIDAQT GENSIPLGLN EQFQV
SEQDB ID: 3101377GTX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVEWLALAAI SLLSAGLSAR FLLASTQRRK AVPHVLEPGG GQGHVFLFDG ADLIGASHGG
61 ADKDIHDWHG LRERLAEDFP GFPSDPDHVE QRGQIVVTPI DGRNDRDVFC EWVDGIVRVE
121 LRRHCAALDG VRRIPDTDPL RLAMDQAPYP VWYLDGDGGI RWCNAAYVML ARKVRGRNPE
181 LFDPLFPDTS DIGSPGKKTR ISITIGETRT KLWFDVVIVP QDTGCLCYAM DINAVVDAEI
241 AQRNFVQTLA KTFAQLSIGL AIFDRNRQLA LFNPALIDLT CLPADFLSSR PEVSSFFDRL
301 RNLNMMPEPK NYGGWRQQMN DLLQAASKGN YQETWSLPSG SVYSVSGRPH PDGAVAFLFE
361 DITAEITLTR RFRSELELGQ AVLDHLDAAI AVFASDGSLA FSNAAYHQLW KSDPERSFAQ
421 VTILDATRTW QDLCTATPVW GEIRDFVDSR ENRVEWEGQV QLRSGANLTC TVSPIQNGST
481 LISFTTLIDD LARSPAQAEG
SEQDB ID: 3101377GTY
Reference:
3101377
Name: ORF TIGR00150
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTASPLILHL DNPDETAHLA VRLGAALAPG DCLLLSGEIG SGKTHFARHL IQSLLPVAED
61 IPSPTFTLVQ VYDSARGEIW HSDLYRLTGL DEIEELGLSE AFSDAITLVE WPDRLGPLTP
121 DHALHLSFET DPADELKRRL TLSWSDPKWD PRIEALK
SEQDB ID: 3101377GU
Reference:
3101377
Name: flagellar L-ring protein, Isotype: FlgH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgH
Sequence:
1 MMQKCLSPKT LIAALVVLSA CGRADHLGKA PSFTPNTESP EHVAMLWPGL PLHTQPQRSV
61 DRASLWSGGQ NSLLGDQRAM KKGDILTVVI EIDEKAEISN DTNRSRSGSE SLGVPHLLGL
121 PQRIDEKLPE GASMSNAVAV DSSSASGGKG SVKRKEKLTL RVAATVVDVL PNGVLSITGS
181 QELRVNFELR ELLVSGYVRP EDISRQNEIT YDKIASARVS YGGRGQITDV QQPRYGQQVL
241 DMVLPF
SEQDB ID: 3101377GUA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGSAHRGAEM SDRSALATAF LAGTSWATAT RAPLAGDASA RRYERLTNPE TGQTAVLMDA
61 PPEQGETVHR FVELARHLRA QGLSAPEILA EDPAQGFLLI EDLGDDLFTR VIARDPTLEA
121 PLYEAATDLL VALRDMPLMA GLDSYGPALL AEKTDIAFDH YVSGITGDDV SETRDRFIDR
181 FGDLLHQTVQ GPKVLILRDY HAENLIWLPD RSDLARVGLL DFQDAVVGHP AYDLVSLLQD
241 IRRDVPARIE MPMIARFIEA TGADDHEFRT AYAVLGVQRN LRILGVFARL SRDLGKTRYL
301 ALMAAVWRHV MRDLEHPAMA GIADLLRETL PPPSSENLAR LHPR
SEQDB ID: 3101377GUB
Reference:
3101377
Name: nucleotidyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSSDLPVML FAAGFGTRMG DLTRTRPKPL IEVAGRPLVD HTLDLARAVS PPRIVANLHY
61 LAPLLAAHLA PQGVLLSHEQ PDILDTGGGL RQALPLLAAE TVFTANSDAI WSGPNPFALL
121 AEAWEPARMD ALLMCVPVGQ AIGHAGHGDF SRDAQGRIER GPGLIYGGVQ IVKTGGLGDF
181 DMPAFSLNLL WNRIGAAGRL FALEYPGRWC DVGHPGGIAL AEEMLRDV
SEQDB ID: 3101377GUC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFDPCPHPRV FALPPGVDFP RALVQGLRQR AAGQAPHVLA RAQVVVNTHR MERRIRALFD
61 AGPATLLPRV SLVTDLTALG AVTHLPPAIP PLRRRLELVQ LITRLLDQQP DLAARASIFD
121 LSDSLAALID EMQGEGVSPA IIRALDVSDQ SGHWARAQQF IAIAEHYLRS GDDELDVQAR
181 QRRVVEALIA EWALRPPEHP VILAGSTGSR GTTMLLMEAV ARLPQGAVVL PGYDFDQPER
241 VWDGLEDALT AEDHPQFRFA RLMARLNLTP DQIAPWSDDV APCPARNRLV SLALRPAPVT
301 DAWMSEGPQL EGIDTATRDI TLIEAASPRD EALAIALRLR QAAEDGQSAA LITPDRMLTR
361 QVSAALDRWN ILPDDSAGLP LHLSPPGRFL RHVAALFSAR LDGEALLSVL KHPLCHTGEG
421 RNEHLLHTRD LELDLRRNGP PFPGVGDLAA FATRREVPEG WTNWVARCFC DQHVTGTLPL
481 IDWVDRLRQL AEALSAGTEG GTGSLWEQKA GQEALAIVTA LADEAPHGGE MDARDFADLL
541 GGLLSTGEVR DRDAPYPGIM IWGTLEARVM GAELLILGGL NEGSWPESPA PDPWLNRRMR
601 HDAGLLLPER RIGLSAHDFQ QAIGAPEVWL TRAKRSDDAE TVPSRWLNRL TNLLQGLPDQ
661 GGAAALSEMR ARGRRWLSMA EALEEAPRSA PAPRPSPRPP LAARPRQLSV TEIKKLIRDP
721 YAIYARHVLR LKPLDPLVQA PDALLRGIVI HEILESFVRD SVLDMALLNR DTFLKRAATM
781 LEELVAWPTA RALWLARLDR VADAFLLSEE ARRADAGPIA FEARMRKQLD GLDFTLTGRA
841 DRIDRTERGS LCLYDYKTGA PPSEKQQAKF DRQLLIEAAL AEEGGFEGID PAPVARAVFI
901 GMGGSYKEVP APLDAEPPAR VWAELHQLIG AYFEPDQGFT ARRMLHKDSD AGDYDHLARF
961 GEWDRSATSE PEDLT
SEQDB ID: 3101377GUD
Reference:
3101377
Name: ATP-dependent DNA helicase, Isotype: UvrD/rep family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSARNAATER QVQAARPDTS TWLAANAGSG KTKVLTDRVA RLLLSDVQPQ HILCLTYTKA
61 AASEMQNRLF KRLGEWAMLA DAPLRAQLSD LGVPGAIDDA RLAHARTLFA RAIETPGGLK
121 IQTIHSFCAT LLRRFPLEAK VSPQFSEMED RAAALLREEI VEDLAAGPQA ALVSDLARHI
181 TDTDFASLTA AICQQRAAFA QPLDWAGLLT LFDLPEGFDT QALLSSVFLG GEVELIRALL
241 PALMGSGSND QKAAARLAAF TRPTLDGLIV LEQVLLTGAS AKSPFSAKID SFPTKGLRQG
301 ALARQMPQLE ALMLRVEAAR DQRLALAAAQ KSLALHRFAA VFLPEYDRRK QLRGWLDFDD
361 LILKARQLLT DPSVAAWVLY RLDGGIDHIL VDEAQDTSPE QWDVIEKLAQ EFTSGEGARS
421 GVERTIFVVG DKKQSIYSFQ GADPDAFDRM QGEFGRKLRD SGSNLEDLTL EFSFRSSSAI
481 LGLVDLVFRD RAQAGFRKES LHRAFKSDLP GRVDLWPLID KVEDEEDGDW TDPVDRPGAR
541 HHTVILAERV AGQIREMIDR GETIPVDGET PGTFARRRVR PGDFLILVQR RSDLFAEIIR
601 ACKAAGLPIA GADRLKVGAE LAVKDLAALL SFLATPEDDL SLATVLKSPL FGWSEQRLFD
661 LAHRRSERYL WAALRARRAE FAETLAVLDD LRGQTDFLRP YDLIERILTR HDGRRKLLGR
721 LGAEAEDGIN ALLSQALAYE RSDIPSLTGF LVWMQTDDLE IKRQMTGVGD MIRVMTVHGS
781 KGLEAPIVIL PDTAQRRAPR DAEIMLAEGT PLWRVPRDSS PALLSTAREA AQSREMNERL
841 RLLYVALTRA EKWLIVAAAG DLGSDGNSWY QAVANAMAEA GATGTEGDIL RLEHGDWTAP
901 ALVEERATPY TAETPPDWAS RPAPAPVAAV KTIAPSDLGG AKALPGEAGQ DEEAAKARGS
961 QLHLLLEHLP GTDPAGWQDH ARRLLPDLDA LLRDDLLAEA RGVLNSPALA EIFAPGTLAE
1021 VPITAPLGAR RLHGVIDRLL IGDSEIGVVD FKSNAVVPAR PEACPEGLLR QMGAYAYALE
1081 QVYPGHTIRT GILWTRTAQI MWLPHDLVAA ALGRIQIS
SEQDB ID: 3101377GUE
Reference:
3101377
Name: thioredoxin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trx
Sequence:
1 MSTVAVTDAT FDAEVKNSDI PVVVDFWAEW CGPCKQIGPA LEELATEYAG KVKIAKVDVD
61 SNPNAAAAMG VRGIPALFIF KDGQVVSNRA GAAPKAALQN WIDSSI
SEQDB ID: 3101377GUF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKTRVLVEF GMGSSLRRED YTEAALRALK DALWHNSVNM AELFGFPKEA MIVDAEIGVQ
61 RPEAVDNVAL AAVFPYGQPN ITVRQGGLDI DKPQGGGRTV IANAAVVVSF DMEAVG
SEQDB ID: 3101377GUG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDHRMILEM GTGNDLYGQD YTKAARRAVQ DALHHSSITL FSKLGIDHGQ MRVQVTIGVQ
61 RPDQVDCDAV AAELPRGVAT VCAVLGGLDV ADPDAGTHHV VATAAIEAYL PSLAGKYQLT
121 RNDPV
SEQDB ID: 3101377GUH
Reference:
3101377
Name: transcriptional regulator/arsenate reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRRDSAKGL VRILYFDKTR NMEITIPLRL STLGHPQRLA VFRLLMRRYP GRVAAGEIGT
61 ALDVKPSTLS SYLSALVQVG LVTQTREGTS LLYQVDMDGM RETMNGLFLD CCRGRPELCA
121 PTDLSNFATS PLMTHPAFNV LFICTGNSAR SIFAETLLRD EGGDRFNVFS AGTRPYSELN
181 PHAVEVLRAK GHDVTRLRAK NIAEFTTPET PKFDFVFTVC DRAANEECPA WQGQPISAHW
241 GMPDPVKAEG NGAQKSLAFQ QVYGTLRNRI RAFANLPFEQ LDRISLQRAV DDLGREA
SEQDB ID: 3101377GUJ
Reference:
3101377
Name: glyceraldehyde 3-phosphate dehydrogenase, Isotype: I, Class: EC1.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gap-4
Sequence:
1 MTVYALNGLG RMGKLALKPL LERGAEIAWI NDAVGSPEMF AHLLEFDTVH GRWQAEFGWD
61 DQSITIDGTR IPVHTSRRIE DLPLNGVDVV IDCTGVFKTE AKLTPYFDAG VKKVVVSAPV
121 KDGDTANIVY GVNHDIYEPA RHRIVTAASC TTNCLAPVVK VLHEGVGIKH GSITTIHDVT
181 NTQTIVDRPA KDLRRARSAL NSLIPTTTGS ATAITLIYPE LKGKLNGHAV RVPLLNASIT
241 DCVFEVARDT SAEEVNALFK AAAEGPLNGI LGYEERPLVS ADYTNDPRSS IVDAPSTMVV
301 NGTQVKIYAW YDNEMGYAHR LVDVAIMVGD SL
SEQDB ID: 3101377GUK
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRAPSERGG LSAYIAVTAA YWAFMLTDGA LRMLVLLHFH MMGFSPVQLA YLFVLYEVAG
61 MVTNLSAGWI AARFGLAATL YAGLALQVGA LVALSQLDPG WQIATSVAFV MVVQGLSGVA
121 KDLAKMSSKS AVKLLAPKQG DGLFRWVAVL TGSKNAVKGV GFLLGAVLLG FAGFTAATLG
181 MAAILAVILL AVLVAMPAGL PKGRKGAKFS EVFSKSANIN WLSAARVFLF GARDVWFVVG
241 IPVYFYAVLS DGSEAGNRAA FFMIGSFMAG WIVFYGAIQA SAPRLLRAAS RGEDGLIAAA
301 RHWAAWLALV PAVLTGATLI SSGPQPWLTA VLVSGLLVFG ALFAVNSSLH SYLILAFSKD
361 ERVTMDVGFY YMANAAGRLL GTLLSGLTYQ LGGVPACLGT AAVMVALSAL AAGRLQVAPT
421 PRSA
SEQDB ID: 3101377GUL
Reference:
3101377
Name: ATP-dependent protease, Isotype: hslV, Class: EC3.4.25.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hslV
Sequence:
1 MADDQFPGWH GTTIIGVKKG GEVVIAGDGQ VSLGQTVIKG TARKVRRLSP GGYHVVAGFA
61 GSTADAFTLL ERLEAKLEAT PGQLARASVE LAKDWRTDKY LQKLEAMLIV SDGQDMFVIT
121 GAGDVLEPEH DVAAIGSGGN FALAAARAMM DSDKSAEEVA RAAMAIAADI CVYTNGNLTV
181 EKIAK
SEQDB ID: 3101377GUM
Reference:
3101377
Name: twin-Arg translocation pathway signal sequence domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITRRSLFAT AAGVAVALAS STAAFAGGTK GHFEGRSNHV TSGSVKLVKD GERYVVELGD
61 DFSLDGGPDP RVAFGKDGKY DPDTKLGALL SLTGKQRYAV PPTWDVSAYN EVYIWCDVAG
121 VPLGVAKIN
SEQDB ID: 3101377GUN
Reference:
3101377
Name: ATP-dependent hsl protease, Isotype: HslU, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hslU
Sequence:
1 MTDLTPREIV SELDRFIIGQ KDAKRAVAVA LRNRWRRKQL ADDLRDEVYP KNILMIGPTG
61 VGKTEISRRL AKLARAPFIK VEATKFTEVG YVGRDVEQII RDLADAAIVQ TRDYMRDEVR
121 ARAHKAAEDR VITAIAGEDA REGTREMFRK KLKSGELDDT VIELEVADGA NPMPMFEIPG
181 QPGGNMGMMN LGDLFGKAFA GRTTRKKLRV ADSYEILIGE EADKLLDDEL VNKTALEAVE
241 QNGIVFLDEI DKVCARSDAR GADVSREGVQ RDLLPLIEGT TVSTKYGPIK TDHILFIASG
301 AFHIAKPSDL LPELQGRLPI RVELRALTEE DFVRILTETD NALTLQYTAL MGTENVAVTF
361 TPDGIAALAH IAAEVNQSVE NIGARRLYTV MERVFEELSF TAPDRSGEAV TVDAGFVDTN
421 LGELTRSTDL SRYVL
SEQDB ID: 3101377GUP
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRIRVAIILS VALLSACTDR SYTPITPEAL AVGSPATIFA ATTRVQKDDG SFGPDRADNL
61 SLLELTVSIP PDRRPGRLDF GYGRANPEKQ FILAGQTVFD QPEAFRARLK QELARQPAGQ
121 RELTLFVHGF NSTQTETAYR AAQLAHDIEM PGSLMVYSWP SKGHALGYAY DADSTVFARD
181 GLETVLRRLG EQRIDRLAVV AHSMGSFLLM EALRQIEIAT PGWSARHLDG VILISPDLDL
241 DVFRSQMRRI KTVPQPFVVM ASEKDNVLNL SRHLRGKQSS ERLGQIGSAA LITDLPVAVI
301 DTSQFSDEAE SGHFIAATSP TLLAMIAEAR NMTDLFEAGN VPLERAFPGI VSYARDTLDV
361 VIENNDR
SEQDB ID: 3101377GUQ
Reference:
3101377
Name: smr domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRRKLTRDE IDLWRKVVRQ ADRLHPERVD GVHPQTLPKP KPTKPLPVPL EPFELGQAAR
61 AKPGRHALSP SLSERLSRTP VQMDPKAYTR MRRGKLKPEG KLDLHGMRVD TAHPALIRFI
121 LTAQSQGKRL VLVVTGKGKY RDEPGPIPTP RGVLRHQVPQ WLSLPPLAQA VLQVTPAHIS
181 HGGEGAYYVY LRRNRG
SEQDB ID: 3101377GUR
Reference:
3101377
Name: MltA/3D domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGALRSAVL AGAMMTASAG AAETTHTVLS FAQLDGWAED DHAAALSTFL NTCDQFNDPD
61 WRSLCAMARE ATPETARGFF ELLFRPVLIE DGQDALFTGY FEPELEGARF PSSRFRYPVY
121 KMPPEARASN PWLERRQILT SGVMDNRGLE IAWVDDPVEL FFLQIQGSGR IRLPDGQTVR
181 VGYGGANGHP YRSIGVELVR RGVYSAHQVS AQVIKNWVRR NPEAGTELLY HNPSYVFFRE
241 LRHLPSDLGP VGAMNRSVTP LRSIAVDPAY TPLGAPVWVE KNGAGLMRRL MVAQDTGSAI
301 KGAQRADIFF GTGDAAGQAA GTLRDPGRMV VLLPIQRAYA LLPDGY
SEQDB ID: 3101377GUT
Reference:
3101377
Name: Tim44 family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNSPLIQLLV LAGIAIFLIL RLKSVLGTRE GFEKPPVPQQ PENRTRRDFE VIEGGPDRDI
61 TDHVPEDSPQ AQALAAMKRI EPAFSVSEFV QGARGAYEMI VMGFERGNLD EIEPFLTEEV
121 FETFVGVVAA REDQGLTIEA EFIGVRETSI QDVHFDKDSN RGEITMRFVG ELTSVVRDRG
181 GDVIEGSPTA VKRQKDVWTF ARVMGTDDPN WLLVATDA
SEQDB ID: 3101377GUU
Reference:
3101377
Name: FxsA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fxsA
Sequence:
1 MYLFLAFLLV PIIEIALFIQ VGGLIGLWPT LAIVVLTAVL GTWLVRTQGR MALGQLNRAF
61 NQLDDPTEPL AHGAMILFSG ALLLTPGFFT DALGFALLVP GVRVAVYRYL RARIQVASFQ
121 MGPGMRQPHR DAGDVIDGEW EEVRPHRERG AGPSGWVEGP DRH
SEQDB ID: 3101377GUV
Reference:
3101377
Name: protein export protein, Isotype: SecB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secB
Sequence:
1 MAETDAAAAQ QPPQIQMRVL GQFIRDMSFE NVMAQRGASG DVQPDVNVQV NLDAKKRSTD
61 NQYEIAIKLN ITSKAKGMDD VLFVFEIDYC GIFHVEGVPN EQLHPFLLIE CPRMLFPFLR
121 RIVSDITRDG GYPPLNLDNI DFMALYRSEL ARQQAAAQAE QKADA
SEQDB ID: 3101377GUW
Reference:
3101377
Name: DNA polymerase III, Subunit: epsilon, Class: EC2.7.7.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dnaQ
Sequence:
1 MREIVLDTET TGFDPETGDR IVEIGAVELW NHIATGNTYH QYINPERMMP AEAFGVHGIG
61 PDILEPPQQP EPGQVTLRDK PVFAKVGQAF RDFVADSHLV IHNASFDMKF LNAELRWMGL
121 PEIPFDRAID TLGMARRKFP GSPATLDALC RRFGIDNSNR VLHGALLDAE ILAEVYLELI
181 GGKQPDFGLS TVTTGDGPGQ ETAWRAMPRP TPLPARITEA ERTAHAEFVE KLGENAVWKR
241 A
SEQDB ID: 3101377GUX
Reference:
3101377
Name: dephospho-CoA kinase, Class: EC2.7.1.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coaE
Sequence:
1 MTFRLGLTGS IGMGKSTTAQ MFVDEGCALW DADAAVHRLY SSGGAAVAPM RAAFPDAVVD
61 DAVSRPVLKH IIAEDPQALK RIEAIVHPLV AEDRARFRDS ATADILVFDI PLLFETGGEA
121 AMDAVACVSI PPEEQKARVM ARGTMTEAQF EQIRAKQMPN EEKCARSDFV IVTDTLDHAR
181 AQVQDIVRQI RAGNIHA
SEQDB ID: 3101377GUY
Reference:
3101377
Name: shikimate 5-dehydrogenase, Class: EC1.1.1.25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroE
Sequence:
1 MTENRIPLAG VIGHPISHSK SPRLHGHWLK TYGINGHYIP MDVAPQDLAQ VVRTLPKAGF
61 VGVNITIPHK EAVMSVADQI TDRATLIGAV NTLIFREDGR ILADNTDGYG FMENLRAGAP
121 GWDPKSGPAV VFGAGGAARA VISALAEAGV PEVIVTNRTR VRADKLKDDF GQRVTVADWV
181 QAGNVIEDAR LVVNTTSLGM IGKPELRVPL DGLRADAVVT DLVYAPLKTR LLAEAEEMGC
241 TTVDGLGMLL HQAVPGFERW FGERPVVDAA TRAAALR
SEQDB ID: 3101377GV
Reference:
3101377
Name: flagellar basal-body P-ring formation protein, Isotype: FlgA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgA
Sequence:
1 MRYLGPILAL VLAQTAAAEV LVPTRTIRAK EIIGAEDLML KSAEVPGSFT DPAEVIGQEA
61 RVALYAGRPI RYADIGPPAI VDRNDLVTLF FDNGPLVITT EGRALGRGAA GDVIRVMNLT
121 SRTTVSGQIR PNGSIEVK
SEQDB ID: 3101377GVA
Reference:
3101377
Name: maf-1 gene
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: maf-1
Sequence:
1 MTVPLILASG SAIRAQLLEN AAVPFTKDVP RVDEESVKAA LLAESAPPRD IADALAEMKA
61 RKISDKHPGA MVLGCDQVLD FQGRLLSKPD SPETALAELK QMSGQRHMLL SAAVIYENGQ
121 PVWRHVGQVR LRMRALSDSY LSGYVARNWD SIRHAVGGYK LEEEGVRLFS TIDGDHFNVL
181 GMPLLELLNF LALRGVIDT
SEQDB ID: 3101377GVB
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMTDLLFTLY PWVKSLHIMA VISWMAGLFY LPRLFVYHVE KAEKVQEAPA IFHEMEEKLV
61 RVIMRPAMIV SWVCGLIMVL TPGIVDWGEV WPWTKGASVI AMTWFHEWLN ARRKGFLAGQ
121 NRLTGRQYRM MNEVPTLLMV VIVLSVIVKF
SEQDB ID: 3101377GVC
Reference:
3101377
Name: transcription termination factor, Isotype: rho
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rho
Sequence:
1 MTIESLNLAD LKAKSPKDLL SMAEELEIEN ASTMRKGEMM FQILRERADE GWTIGGDGVL
61 EVLQDGFGFL RSPEANYLPG PDDIYVSPDM IRQYSLRTGD TVEGEIKAPD DSERYFALTN
121 VTMINFEDPE KARHKIAFDN LTPLYPDERL KMEIEDPTIK DRSARVIDLV APIGKGQRSL
181 IVAPPRTGKT VILQNIAHSI ERNHPECYLI VLLIDERPEE VTDMQRSVKG EVVSSTFDEP
241 ATRHVAVSEM VIEKAKRLVE HKRDVVILLD SITRLGRAFN TVVPSSGKVL TGGVDANALQ
301 RPKRFFGAAR NIEEGGSLTI IATALIDTGS RMDEVIFEEF KGTGNSELVL DRKIADKRVF
361 PAIDILKSGT RKEDLLVDKG DLQKTFVLRR ILNPMGTTDA IEFLLSKLKQ TKTNGEFFDS
421 MNT
SEQDB ID: 3101377GVD
Reference:
3101377
Name: tRNA modification GTPase, Isotype: TrmE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trmE
Sequence:
1 MDTIFALATA QGKAGVAVIR LSGPRAYHTA CLLAGPDLPS RGLSVRQLKD SQGARLDDGV
61 VLTFAAPASF TGEDVAEFQI HGSLATTEAV LRCLGDLDGL RLAEPGEFTR RALENGKMSL
121 PQVEGLADLI DAETEAQRKQ AQAVLNGALG QLAEGWRAKL IRAAALLEAV IDFADEEVPT
181 DVSPEVRALL AEVRADLEHE IAGVRIAERI RTGFEVAIIG PPNAGKSTLL NMLAGREAAL
241 TSEVAGTTRD VIEVRMDLGG LPVTLLDTAG LRETGDLVEG MGIALARRRA DQADLRVFLT
301 EDVDAMGVEL QPDDLHVLPK ADQRPDTANA ISGVTGQGVD QLVQRISDVL KTRSSSAGIA
361 TRERHRVAMK TALDALDRTG TVLESGPDLY DIAAEELRTA IRALESLVGR IGVETLLDEI
421 FASFCLGK
SEQDB ID: 3101377GVE
Reference:
3101377
Name: phytanoyl-CoA dioxygenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPHPLVTPEM IETFQRDGVV LIRGLFADHV ETLRAGVAAN MAAPGPYASD NRKEGHTGLF
61 FDDYCNWERI PEFREVIETS PAAEVAAELM QSKTVQMFHD HVLVKEPGTS MATPWHQDGP
121 YYFVEGRQTV SFWSPLDAVS EATLRCVAGS HRWEKEVLPT RWVSEEGFFA DEGQYMPVPD
181 PEAEGMRIVE FEMAPGDAVA FDYRTLHGAR GNRSTARRRA FSLRLLGDDA RYVERPGRTS
241 PPYPGHDMVP GQRLREDWFP VLLKR
SEQDB ID: 3101377GVF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPDRQISKAG WTGMEYASFD HFLKTGGAAL AKGPVAMIFV EDDVELATTM RHHIQCGFKS
61 VLALMPDAFT LPPDVESRVH RIPFDCGPRL AVTNAINRII AAAPGIWMYY CFNAEYLFYP
121 FCETRSIGEM LAFHGEERRD AMLTYVIDLY ADDLGAFPIG VSLDRAFLDK SGYYAQARKE
181 PETGHPRERQ LDFFGGVRWR YEEHIPKDSR KIDRIALFRS APGLHLQPDH TFDDQEYNTY
241 ACPWHHNLTA AICSFRTAKA LKKNPGSTFE IQSFRWHNST PFEWHSRQLL DLGLMEPGQW
301 F
SEQDB ID: 3101377GVG
Reference:
3101377
Name: tRNA-i(6)A37 thiotransferase enzyme, Isotype: MiaB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: miaB, Linkage: megaplasmid
Sequence:
1 MHCKRRPNPV EAAADPAKAK ARPMSDPKKL FIKTYGCQMN VYDSERMAEA LGGQGYVETQ
61 SAEDADMILL NTCHIREKAA EKVYSELGRF KGLKAAKPDL KIGVAGCVAQ AEGEEIMRRQ
121 PLVDLVVGPQ SYHRLPELEA KTRAGEKALD TDFPEEDKFE KLKGRPKAKR GPTAFLTVQE
181 GCDKFCAFCV VPYTRGAEVS RPADRILREA NELVERGVRE ITLLGQNVNA YHGAGPNGDM
241 TLAGLIWELD KIDGLERIRF TTSHPNDMAD DLIEAHGTCA KLMPYLHLPV QAGSDKILKR
301 MNRSHTAESY LRLIERIRAA RPDIVMSGDF IVGFPEETEA DFQDTLDLVE QVRYGYAYSF
361 KYSTRPGTPA AERAQVDPAE ADDRLQRLQA VITRHQREIQ DGMVGREVSV LFEKPGRQPG
421 QMVGKSEYLH AVHVQDPGLE AGQIARVRIV ASGANSLAGE LA
SEQDB ID: 3101377GVH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRLPHPASRQ RDCRTIGNRC AQGSELHPFW LTIEGDHPPS EAASATLPDR LASSRRPLSG
61 TGAPSSAVWR WYIFLVRRGG IDMKAYLRAG AVLALTAVVA TSPEAQQRPT KPGSDVHNIT
121 ISCFRGPTSS VIWDRPNAVF VEDLVRMGYT YPEAHAIGER ICRDEWGVGQ HDYMRSSLLQ
181 IVAKTPPSH
SEQDB ID: 3101377GVJ
Reference:
3101377
Name: OmpA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAAALATVLA LTGLTTAPAT AQSTRTVIGE RYVPTIWVDP DGCEHWVMDD GAEGFMTPHV
61 RRDGTPVCRR GALCGTMPAD QFFATDSYRI SSEGQARLRQ FFQETGANGY IITGHTDSRA
121 SDAYNLRLSV NRANSVARVG RATGARIVDV RGYGERDPRV PNTSAANMAQ NRRVEIICVN
SEQDB ID: 3101377GVK
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKLIKGIALL AALGGLAACE ATDKTRDRGI DAKDLSQLKA GIWVDPTGCQ HWIIDDGLEG
61 YLSQRMDRNG KPVCDDSLPK GVATGPFKKG SNIVDAI
SEQDB ID: 3101377GVL
Reference:
3101377
Name: PhoH-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAISALTPPQ DSSTPAELQL EFPDNRLLID LCGEHDRHLV LIEQVLGVQI VRRGNLLSVL
61 GEDGARDRAA EVLEALYERL QSGRPVEGAD VDRELRMGRG EEAKDTPAED QLEMFLGGRI
121 EIKTRKKPVE PRTDAQKAYV KSLFENELAF GIGPAGTGKT YLAVAVGVSM FINGLVDRIV
181 LSRPAVEAGE KLGYLPGDMK DKVDPYMQPL YDALNDFLPG KQVAKLIEEK KIEIAPLAFM
241 RGRTLANAFV VLDEAQNATT MQMKMFLTRL GEGSRMVITG DRSQVDLPRG VTSGLSDAER
301 LLKPVPGISF NYFTSKDVVR HPLVAAIIEA YEADTG
SEQDB ID: 3101377GVM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIRIAGFVAA VLTLVWALVH AFVGGAETAT PLLHSALPEV ARGTGWLVWQ FMTGLLLVMS
61 AMLAWGTRAR NAALLWAASA QAAMLALLGI VLVPAIGMSY GLLPQGWLFL PVALLGVVAA
121 RGAAR
SEQDB ID: 3101377GVN
Reference:
3101377
Name: ORF TIGR00043
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTLDLTLEDP RWTILPPLAD RAISATLAQM GLDPELCEIS LLGCDDARIT ALNAEFREKP
61 SPTNVLSWPA EDLAAETPGG TPLAPEPDFT GAVPLGDIAI AFDTCQREAD AAGKPIADHV
121 THLIVHGLLH LLGYDHIRDE DATLMEGLET RILGNLGIDD PYTME
SEQDB ID: 3101377GVP
Reference:
3101377
Name: hemolysin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGDIEGSSSA AQSAQPEETG ETNADKTGFF TRIMDAFSSG ESQQEPTLGG ASAAPVPVPG
61 ILNLRRMRVE DVAIPTAEIV SVPLTVSKEE LVHVFRDSGM TRIPVYENTL DTPLGFVHLK
121 DFALTHGFNG NSTQFDLRSM LRPLLFVPPS MPIGVLLAKM QTERRHMALV IDEYGGVDGL
181 LTIEDLIEQV VGEIEDEHDT DEAQTWVKER PGCYIAQART PLDEFETEIG RSLTNHEDVD
241 EEEIDTLGGL VFMLSGRVPA RGEVVPHPDG VEFEVIDADP RRIKRLRVMI PDAAE
SEQDB ID: 3101377GVQ
Reference:
3101377
Name: apolipoprotein N-acyltransferase, Class: EC2.3.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cutE, Linkage: megaplasmid
Sequence:
1 MSLLAGWYLW QRMMLALGLG AVAALGLAPM SLWLATIGAL LALPALFLAS PGWRQAAWTG
61 WAFATGYFGH ALAWIVEPFL VDVARHGWMA PFALVLMAGG LALFWAAAFA LAAAPARGPE
121 RRVMLLVLTL SLAEMARGYV FTGFPWAGLA QIWVETDAAL LLAWTGPHGL ALATLAAVLP
181 PGVALARGLG GRALLLRCVP ALALGLAILA VDGARVPLEG SGKVVRLVQP NAPQHQKWDP
241 DWYPLFLERQ IRFTAAGTAP DLVVWPESAL PYWLDDAGPV LERIAAAARG TPVLLGANRA
301 EGPRIYNALA LIGAGGRIEA TYDKHHLVPF GEYVPLGDLL EQFGISGFAT RSGRGFSAGP
361 GPVTLAIPGI GAALPLICYE AVFPRDARGT AERPRLLVQA TNDAWFGTWA GPYQHLAQAR
421 MRAIEQGLPM VRVANTGVSA MIDPQGRITA ALALGREGYL DVDLPPALAP TVYGRTGDLP
481 LLVTLLVLLA AAARIQGRNL LPNSD
SEQDB ID: 3101377GVR
Reference:
3101377
Name: Met(adenosyl) synthetase, Class: EC2.5.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: metK, Linkage: megaplasmid
Sequence:
1 MSRQNYIFTS ESVSEGHPDK VCDRISDAVL DAFLTEEPEA RVACETFATT NRVVIGGEVG
61 LSDQAKLREY MGRIDQIARD CIKDIGYEQD KFHHETVEIT NLLHEQSAHI AQGVNAAEGK
121 DEGAGDQGIM FGYATTETPA LMPAPIQYSH AILRRLAEVR KNGTEPALGP DAKSQLSVIY
181 RDGMPVGVSS LVLSTQHLDP DLTSADIRAI VEPYIREVLP EGWLSADTVW HVNPTGKFVI
241 GGPDGDAGLT GRKIIVDTYG GAAPHGGGAF SGKDPTKVDR SAAYAARYLA KNVVAAGLAD
301 KCTIQLSYAI GVSKPLSIYA DTHGTGDIAP AAIEKAIDTV MDLTPRGIRT HLGLNKPIYE
361 RTAAYGHFGR EPEADGGFSW ERTDLAEALK KAV
SEQDB ID: 3101377GVT
Reference:
3101377
Name: DNA topology modulation kinase, Isotype: FlaR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQRIMVIGGP GSGKSTLGRK LGARLGLPVV HMDPIYWLGD WVERDKAEAM RMAKEVADGS
61 QWVFEGNHFA SMAYRAERAD LIVFLDMPRV LRMWRILWRS LRYYGRTRPD MGPNCPERFN
121 RAFLKFCWTY DREGRLRALG FVDDWRDRRR VRILTSRRQV AAFLVEIDRQ
SEQDB ID: 3101377GVU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRQFARYTLI AALTLGSALM AHAEEDDLVF RVDGETLVYD TTRGDEAGGT DDIEVAHVDR
61 LLALLRQNPE IRVLDLNSTG GSLYAGREMA RIVLDFDLDT LVSGECFSSC VRIFLAGAGR
121 RMLLGAKIGF HQTTWSPGSV EEYYNANRDS DGWGTPFDFA SWVYEDTQTE VHDDLIYMID
181 RGVDAEFAVR TKGVRADDSW YPSRLELTRA GVLRERLRDA E
SEQDB ID: 3101377GVV
Reference:
3101377
Name: tRNA (guanine-N7)-methyltransferase, Class: EC2.1.1.33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trmB, Linkage: megaplasmid
Sequence:
1 MSKTTPDRPR RNFYGRIKGK TLKPNQRTYL DEDLTPLAPG PVSWQDNPTR QPLDLNALFG
61 GRETWLEIGF GGGEHLVHQA ASNPGIGIIG AEPYINGVAM LLGKIRAAGG DNVRVHPGDV
121 RDLFDVLPAQ SISRAFLLYP DPWPKKRHHR RRFVTPEHLE PLARVLKPGA IFRVATDIPD
181 YVRQTLEEVP RAGFEWLAER PADWRQPWGD WISTRYEQKA LREGRVPHYL TFRRLEG
SEQDB ID: 3101377GVW
Reference:
3101377
Name: 3-phosphoshikimate 1-carboxyvinyltransferase, Class: EC2.5.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroA, Linkage: megaplasmid
Sequence:
1 MSGHGTPIPM TSHPCGPLSG VAEVPGDKSI SHRALILGAM AVGETRITGL LEGEDVLDTA
61 KAMRAFGAEV TRHADGSWSV HGVGVGGFAE PEQVIDCGNS GTGVRLIMGA MATSPISATF
121 TGDASLNKRP MARVTDPLAL FGAQAVGREG GRLPMTIVGA ADPVPVRYEV PVPSAQVKSA
181 VLLAGLNAPG QTVVIEKEAT RDHSERMLAG FGAEVTVEDT DEGRVITLTG RPELKPQVIA
241 VPRDPSSAAF PVCAALITPG SDVLVPGIGL NPTRAGLFTT LREMGADLTY ENERTEGGEP
301 VADLRARYSP DMKGITVPPE RAASMIDEYP VLSVVAANAQ GVTMMGGVKE LRVKESDRID
361 AMARGLRANG VTVEEGDDWW AVHGLGIGKV PGGGTCESFL DHRIAMSFMV MGMGAQAPVS
421 VNDGSPIATS FPIFEPLMGG LGAKLERA
SEQDB ID: 3101377GVX
Reference:
3101377
Name: cytidylate kinase, Class: EC2.7.4.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cmk, Linkage: megaplasmid
Sequence:
1 MTFTVAIDGP AAAGKGTISK AVAAHFGFAH LDTGLLYRAV GRRTLEGEAA ETAARDLRTE
61 DLERDDLRTA QVAQAASKVA VIAEVRAALV DFQRAFARRA GGAVLDGRDI GTVICPEAEV
121 KLFVTASAEV RAERRYLELT AKGQDTTRAA VLADVRERDA RDADRATAPM KPAEDAVLLD
181 TSTMDIPTAL AAAIAEIERK MPAKG
SEQDB ID: 3101377GVY
Reference:
3101377
Name: YHS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTFALTALI AALPMLAAPA FAADEVNVSN GISAGGAPLA AHGVDLVTLV RDGNPVEGFA
61 NYSATIDGAS YYFTSEENLK EFQAEPARYL PQHGGFCSYG VAVGKKFDGD PDKYVLADGK
121 LFLFLNAATR DKFLEDVAGT TATADGNWAK IKHVAVGDL
SEQDB ID: 3101377GW
Reference:
3101377
Name: flagellar basal-body rod protein, Isotype: FlgG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgG
Sequence:
1 MRALKIAATG MSAQQMRVET ISNNLANMNT TGYNARRAEF ADLHYQQIAR AGTVNASDGT
61 VLPTGVQLGL GVRPAAVTVH LEQGALSATG NDLDLAIEGR GYFEVTLPSG QSAFTRDGSL
121 KRSAEGLIVT SDGLSVVPEI TIPSDARSIS INAAGEVYAY FDDAAEGQLL GQVTLAGFTN
181 AKGLEAIGSN LFKETEASGS PITGNPGEDG LGTLRQGYLE DSSVDAVREV TELIEAQRGY
241 EMNAKVISAV DQMMSATTQV R
SEQDB ID: 3101377GWA
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLFALILLTL PALIIWLAAR IPALDRIGVV PLTFATGFAL ALSLDLSAFT QIQTTLQEVS
61 VALALPLILF AANLRRALTE ARGAGLAMAL SLVSVCVASL LGVLLFQGRV ENLPQVAGMA
121 VGAYTGSGVN MGAIKSATGA SDALFLTMVT YDIVFSIGYM LVIVLVGQRL AGLILPPFVP
181 HSQGDHEANT SHIADDSARG YARLIQRSGL AGSALAFGAA GLCVGVAVAL SGLLPETWSG
241 TATILLITTF GLLGAFVPRL HASTTSFHLG MYLILIFCLS SATLLDLSVL SGMNWALGGY
301 FAFILLGAMA LHALLCRLFG IDRDTYLVAS GAAIMSVPFI PVICGALRNR ALLVPGIAIA
361 ILGYAVGNYL GVVVASLAAG M
SEQDB ID: 3101377GWB
Reference:
3101377
Name: Ala racemase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSEAYFQKLQ AALIAAGRQL PTLVVDTERL AANMAAVRRM TAPSLALRVV EKSLPAPDLL
61 RVVIAGLETN RLMSFHLPFV QQAAAAFPEA DILLGKPMPV GAVAGTSPTL DAQVHWLIDS
121 PERLAEYAAL AAQSDRALRI CLEVDIGLHR GGFSLARAGE FAAALTRLRD DPNLHLTGLM
181 GYEPHIARLP RLIASRARAL DAARAAYARF HALTVQTLGA GTAAKLIYNT GGSTTFMLYD
241 GSGPETELAL ASALVKPTDF DLPALEALQP AAFIAAPVLK TVERPEIPMA PGLSRVLRLM
301 GRSPERACFI YGGNWLADPC HPAGARRSAL FGHSSNQEMY DLPANSTLKP GDFLFFRPRQ
361 SEALFLQFGD IAVFDGTAIT DWWPVWHETH
SEQDB ID: 3101377GWC
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTLTRRKLLG YGALAGLAVP AAMQAHWLSR DFTRPDYSPD IPPAPPGRQV WRNWSGYQVA
61 TPQQIYAAAS EEELATRIAA WPGRIRPVGS GHSFSALVPS QDMILDTGRL SGLISVDAAA
121 GMATFGAGTR LRQAAMLAAD HGLGFANLPD IDVQTLAGSF STATHGTGRG LQAMHGCITG
181 FRLITADGTA RDVTRDSNPD LFDAGRVSLG TLGVITRYTL KLEPSYALNR RLFILPTDEA
241 ITRMHDLAAA HRNFEFYVLP NLGYAAVITH DLYEGEIAGR VPSEDEDWIA TLKDLRDILG
301 WWPWLRRRAF GAYVALEVPA DGVLEDTTDE YWKLLSTARA TRMNEMEYHL PEDRAQEAVR
361 AVVAALESRK ESFFPMEVRF TGQDDAWLSP FNDGTRVSVA VHKLASEPLD MLFGTVEPIM
421 RAYGGRPHWG KLHSLNAPDL VALYPDFDRF AALRARLDPA GKFLNPHTAA LFGAGDV
SEQDB ID: 3101377GWD
Reference:
3101377
Name: cytochrome c5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRALILLISA LVLAALWWWL SGADAPAEPE ATDIARAETQ RPTDPELAAI YERSCMACHA
61 LVEAQAPLTG FVPAWAAREK ERGAHGLLLS ARNGFGNMPA MGLCLDCSDE QLAALIAFMS
121 GEGQQ
SEQDB ID: 3101377GWE
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVPTETDTPM HTRATPKQAR ARQRVADILD AASALLAERP PGDLNTSLIA ERAGVPVSSI
61 YRYFPTLRDL LDELSARAAG DLRQHFIETI AATEGEPDLV LRIRRTLEGI RVFMAEHPYY
121 RGLLLLLASL RGVQSVEDDD NAELVGFLAD RWARGLDGFT GGDPQVVATT AVQIALTLED
181 RMARQTSPAL EAQYHEEMVR ALDAYLSLYL RRDTEEES
SEQDB ID: 3101377GWF
Reference:
3101377
Name: 2-oxo-hept-3-ene-1,7-dioate hydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTPEQHADAA ARLIKAEETG RQIGLLSLAY PGMDMDDAYA IQQALAAHKQ TAGRHVIGWK
61 IGLTSKAMQY ALNIDIPDSG ILFDDMAFDD GATVPKGRFI QPRVEAEIAF VMKEPLGGAY
121 VTRADVLAAT DYVAPSLEIL DTRILRVDPE TGHARNVCDT ISDNAANAGV VLGKQRHAPD
181 AFDLRWVGAL TFRNGEIEET GLGAGVLNDP VESVVWLARR MAQYGQVIEP GHIVLSGSFI
241 RPVECPPGTR IEADFGPFGA VSVHFA
SEQDB ID: 3101377GWG
Reference:
3101377
Name: fumarylacetoacetate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKFATIAAER QELYGIIRDE GFVALSPDFP RWPDLRAVIA AGGLHDLAKA AMGRAVTHSD
61 FTYLPPVPNP GKIICVGVNF PDRNAEYKDG SAAPKYMSLF PRFASSFVGH GQPLIRPPEN
121 HTLDYEGEMA VVIGKGGRRI RAEDAYDHIA GLSVCNEGTI RDWVRHAKFN VTQGKNWDRS
181 GAIGPWMVPF THPAQIDAAR ITTRVNGELR QDDALANMIF SVREEIAYIS TFTTLNPGDI
241 IVTGTPTGAG ARFDPPRYLK PGDVVEVEVT GVGTLVNGVE DEV
SEQDB ID: 3101377GWH
Reference:
3101377
Name: 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Class: EC1.13.11.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hpcB, Linkage: megaplasmid
Sequence:
1 MGEIVLAAKC THVPTMLMSE QEGPVKGKRQ AAIDGHLEIA RRARALGADT VVICDTHWVI
61 NAGFHINANS RFQGLFTSNE FPQFIQNMPY DYEGNPGLGD AIAKEASARG AYTLAHHLDS
121 LELEYGTLVP MRFMSREHKM KVVSVAAWCT VHDHDESRIV GEAIRAAVEA SNSKVLLVAS
181 GSLSHKIWPN KDYAANNGTF TISSEFNRQM DLHVLEMWKR GDHATFLKML GDYARFCCGE
241 GSMHDTAMLY GALGWDSYDK PCEVVTEYFP SSGTGQTNVI FPV
SEQDB ID: 3101377GWJ
Reference:
3101377
Name: 5-carboxy-2-hydroxymuconic semialdehyde dehydrogenase, Class: EC1.2.1.60
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hpcC, Linkage: megaplasmid
Sequence:
1 MPDLSTRLAD LDRHLQRFRR DGVMNRIGGQ DVPGGAGRFD SISPVDRSVI CSVARGDAAD
61 MDAAARAAHA AFPAWRDMPA TERRAILIRI AEGIEARAEE IALCECWDTG QAWRFMSKAA
121 LRGAENFRYF ADQVVQARDG QHLKSPTLMN ITTRVPIGPV GVITPWNTPF MLSTWKIAPA
181 LAAGCTVVHK PAELSPLSAR LLIEIAEEAG LPPGVLNLVN GFGEDAGKAL TEHPLIKAVA
241 FVGESRTGSL IVKQGADTLK RVHLELGGKN PVIVFDDADT ERALDAVIFM IYSINGERCT
301 SSSRLLVQDT IREEFEARLV ERVNNIKVGH PLDPTTEIGP LIGEEHFAKV TSYFDIARQD
361 GATVAAGGEV VGDQGYFVRP TLFTGANNRM RIAREEIFGP VLTAIPFSTE EEALQIANDT
421 PYGLTGYLWT NDLTRALRFT DKLEAGMIWV NSENVRHLPT PFGGVKASGI GRDGGDWSFE
481 FYMEQKHIGF ATGQHKIQRL GA
SEQDB ID: 3101377GWK
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: A, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrA, Linkage: megaplasmid
Sequence:
1 MQNFRLKKGL DLPVKGAPVQ TIHPGPAIGS VAVLGADYLG LKPRMLVQEG DEVRRGTPLL
61 CHKDAPEAMM VAPVTGRVAA INRGARRVLQ SVVIEVTDAA DPGLDFATTG NGKTREGLTE
121 KLCAAGLWTA FRTRPYSKMP VPGDTPNAIF VTAMDSEPLA ADAATIIADA GSAFASGLAA
181 VALLSDGPTW LCHKPGDAIP GGDVAGVSVA TFDGPHPAGL AGTHIHFLAP LTSDKSVWTI
241 GYQDVIAIGR LLETGHLDPS MVIALSGPAA REPRLIRTIM GASTGDLTTA EISVDAPVRV
301 ISGSILSGRQ AEGPFAYLGR FARQVTLIEE DRKQHTLGWI LPMPSKFAVQ PVLGSAFSRK
361 LYALTSNLNG GRRAMVPTGT FEELMPQDYL PTQLLRALLV MDTDTAQALG ALELDEEDLG
421 LVGFACPAKY EYGLALRDSL SKIEKEG
SEQDB ID: 3101377GWL
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: B, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrB, Linkage: megaplasmid
Sequence:
1 MGLRNFFDRI EPNFTKGGKY EKLFPIYEMV ESFIYTPKTV TTAAPHARSY VDMKRIMTYV
61 VIATIPAILW GMWNTGYQAN SAIAMLGADA ATGWRIAILQ ALGISLDAAN PLANVAHGFL
121 YFLPIYLTTL IVGGIWEVVF ATVRGHEVNE GFLVTSMLYT LIMPASAPLW QVALGISFGV
181 VIGKEVFGGT GKNFLNPALV GRAFLYFAYP ANMSGDSVWT PVDGFSGATA LAVSAADGYQ
241 QLATNGITWM DAFYGTIQGS FGETSTLACL IGLAFLLMTK IANWRLIVGS MAGMIGFSLL
301 LNVIGSDSNP MFAMPWYWHL VLGGYAFGLA FMVTEPVSAS HTNTGRYIYG ALIGVMVVLI
361 RVINPAFPEG MMLAILFGNV FAPLIDYFVV QANIKRRARR HV
SEQDB ID: 3101377GWM
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: C, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrC, Linkage: megaplasmid
Sequence:
1 MSETQSKGLI ARFLAAPPDS VGKTIFVAVA VCLVASMIVS SAAVALRPVQ EVNKLKDKQM
61 NILQVAGLFE PGQNVAEAFK AFEPQVLELT TGRFTDQFDA ATFDDKAAAN DADLSRALDD
121 DPAGIGRQAL YRTVYLLRDE AGGIDKVILP IHGYGLWSTL YGFIAVEENG NDIFGLQFYQ
181 HGETPGLGAE VDNPRWKAMW NGKKLRDDAG DLQITVAKSQ PAAGADFYVD ALAGATLTSV
241 GVDNLVRFWM GEQGYAPFLE ALKAGEI
SEQDB ID: 3101377GWN
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: D, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrD, Linkage: megaplasmid
Sequence:
1 MSQTKKELLI DPLVDNNPIT LQVLGICSAL AVTSSLQVAF VMALAVTFVT AFSSFFISIL
61 RNQIPSSIRI IVQMVIIASL VILVDQILKA YAFEISKTLS VFVGLIITNC IVMGRAEAFA
121 MKNPPVASFI DGFGNGLGYG LILMLVGVIR ELFGSGSLFG VTILQTVNNG GWYVPNGLLL
181 LPPSAFFVIG LLIWAFRTWK PKQIEEREFK IQSVEAH
SEQDB ID: 3101377GWP
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: E, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrE, Linkage: megaplasmid
Sequence:
1 MEGLISLAVK AVFVENLALS FFLGMCTFIA VSKKISTALG LGISVMVVQA ITVPANNLLL
61 NTLLKPGALA WAGFPDVDLT FLGLISYIGV IAAMVQILEM ILDKYFPPLY NALGIFLPLI
121 TVNCAILGGS LFMVERDYNF AEATTYGLSS GFGWALAITA MAGVREKLKY SDVPDGLQGL
181 GITFITAGLM AMAFMSFSGV KL
SEQDB ID: 3101377GWQ
Reference:
3101377
Name: NADH/ubiquinone oxidoreductase, Subunit: F, Class: EC1.6.5.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nqrF, Linkage: megaplasmid
Sequence:
1 METFSLGVVL FTLIVIALVG VILMARSRLV STGNVNITIN GEKTISVPAG GKLLQTLAAE
61 KLFVPSACGG GGTCAQCRVK IHSGGGSILP TEESHITKRE AACGDRLSCQ VAVKQDMDIE
121 VPEEVFGVKK WRCKVRSNDN VATFIKALVL ELPEGENVNF RAGGYIQIEA PAHQLAYTDF
181 DVQDEYREDW DRFNLWQYKS VVNEPVERAY SMANYPEEKG IIMLNVRVAS PPPGSSDIPA
241 GKMSSYIFNL KPGDEVTISG PFGEFFARDT DKEMVFIGGG AGMAPMRSHI FDQLKRLKSK
301 RKISFWYGAR SKKEMFFVED FDMLAAENPN FEWHVALSDA QPEDDWKGYT GFIHNVLFEE
361 YLKNHPAPED CEFYMCGPPI MNQSVINMLL ELGVDREDIM LDDFGG
SEQDB ID: 3101377GWR
Reference:
3101377
Name: CBS domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAPSSYQAPT RGDKAEKTTY SQSASSNLAQ SQSTVADLLG GKGEAVFSVR PGDTIGQVVG
61 VLKDKRIGAV LVTDQNGALL GILSERDIVR RMADTPGQTL PQQAEGLMTR AVQTCAPDET
121 LNVVLKRMTE GRFRHLPVMR DGKLCGMITI GDVVNFRLRE LEYEALKMKQ MIVG
SEQDB ID: 3101377GWT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTGPGSNWPT GYRSSSRPCR HVSGPDMRMG PWAGSPACLL RLTPILPGHP DPQRANRPQP
61 GQNRSPPMFD TLYLTPASAA LIFFMVVVCG HGYRKSWKAE PPAPRWHLWA YGLPAAIGLL
121 TLAFLPLKG
SEQDB ID: 3101377GWU
Reference:
3101377
Name: thiamine biosynthesis lipoprotein, Isotype: ApbE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: apbE, Linkage: megaplasmid
Sequence:
1 MTPPRRWPMP QQRNIRGWPM VRWLALPVAL MLSGCLFEAE PEVVKLSGDT MGTTYHITAI
61 GADLDAEALG AAVEVTLAAV NAKMSNWDPK SEVSTFSART DTAPMPVSPE FVTVIGAANQ
121 VHAQSGGKFD ITLGPLIELW GFGPRKPEDP IPSDAEIASA LQGVGQARLL TLDTAGGTLA
181 KARPETGINL SAIAKGYGVD AVAETLRGFE IDDYMVEIGG DLVTRGKNDK GEAWRIGIER
241 PDRGAQTVQL VVPISDYGMA TSGDYRNYFE HQGQRYSHIL DPVTGRPVTH RTTSVTVIAD
301 SAMMADAWAT AMLVLGLDQG LKVAEAHKLA VFFIERDAQD GAEAYMTAQS SAFADLLNAA
361 D
SEQDB ID: 3101377GWV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTFLLAFFL LMIVMLGMSL GVMLMGKRIK GSCGGLNAIS GADRCVVCSK EIDPDSPLRD
61 RLQCPRARKM AERLQDAD
SEQDB ID: 3101377GWW
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAPTDQHDQL VLSIYDAALD PGKWPELLTR IARYAGGIGA MIFEVETPGD QPHLLASHFS
61 DTYQIDLVEG YLNQHNDLEI ADQAVFARHS RATDDIQLIP DSVLAASEAE LLARPNQKTM
121 MQYGIRYRCG ALLNKDQLFH DRFSMQFGSD ASDDLPQRLA RASRLLPHIA KALSIGRPIQ
181 AVQKRHQTVL NALDKLDVGF CVLDERMNVI AGNEEFRRQS EESGVFRRDP QGKLSFRSDD
241 DLSRARTLLG DPQQHGRFGA RPRKEALEAD HQSDARIGDA LCIDISPLHK AREIGEQALD
301 GFLLMSTDTS RTYRLEMPTI AALFDLSEAE CAVFELMAEG KTNKQIAEER GRSLDTINSQ
361 VKSILSKSNC DNRTQAIRMA TNISSGFLVR D
SEQDB ID: 3101377GWX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MISKHVIGMA LACGLVALAA PEAQAQSGWS VCRDVECLDQ GWNDAQRRWW YTTTQGSRLL
61 PLSWMRALEQ PGDGDGAIRA FLDRAYMDEL GYIANPDPVH NPEGLPLGWV VDQDKTLSAD
121 LMCDTFPETC DALTMREPWV GLTCSACHTN EITHQGRRLR VEGAPTLADF QRMEEDLLQA
181 LKDTVADRDR FDRFARGVLG ADQSIDGRES LELQLNEQIV WQQALADKNA APKVRYGHAR
241 LDAQGHILNK VALTIRHPNQ ITNVLADAPA SYPHIWNTSQ QDQLQWNGIA PRMARIRLLG
301 ENTELGALVR NTSEVIGVFA HLETDKSKVL RGYPSSARVR ELVSLERQLE SLQSPRWPED
361 MLGAIDWDLA AQGREVFTRK IDGESCADCH SHMAPGDTSS KMEISMTPLT ELGTDVFTTC
421 NTFLHRSKSG NFGGQLVDTK FTRIDRDEDY TRLMLVNATV GTIRGKLFEV LAAILGKDDR
481 PSGIRTESSL VTEYLPGVSD AKKKADAEEC LTQEHPLLAY KARSLNGIWA TAPYLHNGSV
541 PTLYDLLLPA RMRNVATALD AELPEDAATR PEVFGVGSRE FDPVKVGFVS ELDQNPFTFR
601 ARGEDGEPIP GNFNAGHDYG TAGLSEEDRR ALVEYLKTL
SEQDB ID: 3101377GWY
Reference:
3101377
Name: crcB family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSSRITHDLP LATLVVNVLG TLLLGFWLGQ PETGGPDIEH GRRLILGFCG GFTTFSSFAY
61 QTLDLHRTRS IATAAGNILA SVTLCALAFL MGTYLSG
SEQDB ID: 3101377GX
Reference:
3101377
Name: flagellar basal-body rod protein, Isotype: FlgF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgF
Sequence:
1 MANNIANSAT SGYRQQGLVF SEFVRGGLGT SSLSMARGQV RNTSQEQGVL TQTGGDFDLA
61 IDGEGFFMLE TPGGERLTRA GSFTPNAQGD LVNPDGYRLI DANGAPIFVP PDIDGVRIGP
121 DGTISGAGRL LGQIGLFKPV DPHGLIREGG VFFRADDGTE PIEGASIMQG FLEGSNVNAI
181 DQVARLVEVQ RAYELGQSFL QAEDERIRNA VNSLLR
SEQDB ID: 3101377GXA
Reference:
3101377
Name: crcB family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRQKAGSYLA VFAGGAIGSV LRELLGFQLP GLSFLTATFG INIAACFLLG WLYAIRHRLH
61 PHLLHLGAVG FCGGLSTFSS FVLELDQLTR MDGWSIGLTA MTLEIAAGLA AAILGEALGR
121 GREARR
SEQDB ID: 3101377GXB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDTPANKPCI ICVAITGSVP TKADNPAVPI TVSEQVESTQ EAFEAGAAIA HCHVRNDDGT
61 PSSDPDRFAR LTEGLHTHCP GMIVQFSTGG RSGAGQARGG MLPLKPDMAS LSVGSNNFPS
121 RVYENPPDLV DWLAAQMRSY RVTPEIEAFD LSHILRAIDM HGRGLLYGKL YVQFVMGVKN
181 AMPADREVFD FYVRMMRTRA PQAEWCAAGI GANQLTVNEW AIAAGGHTRT GLEDNIRLDR
241 QTLAPSNAAL VRRSVELCDK YQRPVASWQQ AREILGLPAA ARN
SEQDB ID: 3101377GXC
Reference:
3101377
Name: protocatechuate 3,4-dioxygenase, Subunit: alpha, Class: EC1.13.11.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcaG, Linkage: megaplasmid
Sequence:
1 MVQKLDYLKE TPSQTAGPYV HIGLAPGAAG FDIYERELGW DIAGPNAAGA RIRVEGRVID
61 GTGSPVKDVL IEVWQANAAG IHAHPEDPGQ VEEGFRGWGR VITDFETGDW GFDTVKPGPV
121 PGRNGAMQAP HLTLWIVARG INIGLNTRLY FSDEAEANAA DPVLNLIEWE NRRATLIANR
181 DERDGKPLYR FDIHLQGPQE TVFFDI
SEQDB ID: 3101377GXD
Reference:
3101377
Name: protocatechuate 3,4-dioxygenase, Subunit: beta, Class: EC1.13.11.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcaH, Linkage: megaplasmid
Sequence:
1 MPKPGEFYQR DRAWHPPAHV HDYKTSVARS PRQALISLEN TVSEITGPVF GHGDIGAGDN
61 DLIHNYAQAG HSALGERILL HGRIFDENSR PLPHTLVEIW QANAGGRYRH KKDTYLAPID
121 PNFGGCGRTL TDENGYYYFR TVKPGAYPWR NWVNSWRPAH IHMSIFGTAF AQRLITQLYF
181 EGDPLIHACP IVNTIPDPAA IDRLIAPLDM NAAIPFDCLA YRFDVVLRGR RSTLFENRLE
241 GN
SEQDB ID: 3101377GXE
Reference:
3101377
Name: 4-carboxymuconolactone decarboxylase, Class: EC4.1.1.44
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcaC, Linkage: megaplasmid
Sequence:
1 MSERYDNGMK VRRRVLGDAY VDRAEAGKTA FEAPFQTLIT EGAWGTVWAS DGISDRERSM
61 LTLALLAALG NFDEIPMHIR ATARTGASKQ DVLEAFQHVA IYAGVPRANQ ALKLARQTYD
121 EMEAD
SEQDB ID: 3101377GXF
Reference:
3101377
Name: 4-hydroxybenzoate hydroxylase, Class: EC1.14.13.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pobA, Linkage: megaplasmid
Sequence:
1 MRTQVVIVGG GPSGLLLGQL LHRKGIDTVV LERQSRAHVL GRIRAGVLEV GFVNLMREAG
61 VAERMDREGF VHHGTILAHG EEQIRISFEE LIGRHVVVYG QTEVTHDLYE ARDRVGGKSV
121 FNAEGVTIHD ADSDAPYVTY TANGTEHRID CDYVAGCDGF HGVSRQTIPT GIRKEFEQVY
181 PFGWLGLLSE TPPVSDEVLY SLSDRGFALC SMRNATLSRY YIQCALSDKV ADWSDDAFWA
241 EFRQRLPRAV AERLVTGPSI EKSIAPLRSF VCEPMRWGRL FLCGDAAHIV PPTGAKGLNT
301 AASDIHYLYH ALVQVFESGE TEGIERYSEQ ALARIWKTQR FSWWMTKLLH RFPEQSEFDL
361 RIQRAELEFL RDSRDAQTVL AQNYVGLPY
SEQDB ID: 3101377GXG
Reference:
3101377
Name: pca operon transcriptional activator, Isotype: PcaQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcaQ, Linkage: megaplasmid
Sequence:
1 MIDRRIKFRH IQCFVEIARE GSLKTAAAKL FLTQPAMSKT LKELEEITGT TLMRRSRAGV
61 ELTKPGEVFL HFARMSLASL QQGLDGIETE GRRQRETLSV GALPSVAAYL MPGAVSEFSR
121 LAPHALLRIQ DGPHGYLIER LRLGALDLVI GRMGPPETMQ GLSFTQLYQE QVVFVVRPGH
181 PLLAAPDLAR VADWPVIYPP PGAAIRPLVE QMLIANGIGE FPNRLETVSG AFGRVHARRS
241 DAVWIISRGV VANEIAEGRL VALPFGTELT RGPVGLMTRP DRPESAVAQL FALALRNVIG
301 AGAGA
SEQDB ID: 3101377GXH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPRQPNRPEP IRCALRRVAG VLGALLLVLQ LLVPHLAQAD EGAWIEICAE GGATWIQMPA
61 EETGDPCPDC GDCLLCSTAM DVLTPAYGAA VEPVILIARQ LTGTDVSVAA ARHRLWPETR
121 GPPFQDKRGA MC
SEQDB ID: 3101377GXJ
Reference:
3101377
Name: nitrous oxide reductase transcriptional activator, Isotype: NosR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosR, Linkage: megaplasmid
Sequence:
1 MLITRVIRVL LTLLFLAPLP ALASDLPRFL AALAPADLAP GADGFGPLRE DVPVAPVLKG
61 GETVAWAFLT SDFVGTTGYS GKPIHVIAAI DADAVLTGVK LVEHSEPIVL IGIPNSKMVA
121 LTEGYKGLDL KREAETGGEG HDLDIISGAT VTIMVIDDSL VRAGLKVARA LGLGGLSPAT
181 PEGPRREIDM GQTGTSDWFT LSGDGSVRRM TLDIGQINAA FDATGDERAK RRRERGAPED
241 TFIDMHLALV SVPEIGRTLL GEAEYANLVN WLEPGEQAIL VLGRGAYSFK GSGYVRGGIF
301 DRIQLIQGDS AVRFFDRQQR RLGTVAATDA PGFTELDLFK IPADAEFDPA APFRLQLLVQ
361 RAVGAVEKSF LTFDLGYRLP ERFLLPAAAP AVVEDASDEA AAKAALWQRI WKDRTVEIGV
421 LSAMLLLLTA TFFFQFQATM NARVFYWFRF AYLSATLFFI GWYANAQLSV VNLMALAGSL
481 RTGFSWDAFL LDPLVFIQWF AVAAALIFWG RGAYCGWLCP FGALQELTNK LARALRLPQW
541 TLPWGLNERL WPVKYMIFLG LFGLSFVSIP LAETYAEVEP FKTAIILKFM RDWPFVVFAL
601 LLLLIGLFIE RFYCRYLCPL GAALAIPARI RMFDWLRRYK DCGNPCQTCA NECPVQAIHP
661 TGEINPNECI TCLHCQVLYQ SEAKCPVVIR QIKRRARTGT VDPKLTLGHP PANHPNAKPQ
721 EAS
SEQDB ID: 3101377GXK
Reference:
3101377
Name: nitrous oxide reductase, Class: EC1.7.99.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosZ, Linkage: megaplasmid
Sequence:
1 MSDHDNNLSV TRRGLLGATA TGAVLASTGL GATLMTAREA SAAAKVNLEP GELDEYYGFW
61 SSGQTGELRI LGIPSMRELM RVPVFNRCSA TGWGQTNESL KVLTEGLLPE TKQFLASNGK
121 KTYDNGDLHH PHMSFTDGTY DGRYLFMNDK ANTRVARVRC DVMKCDKIIE IPNAHDIHGL
181 RPQKYPRTGY VFANGEHEAP LVNDGQILDD PSQYVNIFTA IDGDSMEIAW QVIVSGNLDN
241 TDCDYQGKYA FSTSYNSEMG MNLAEMTENE LDHVVVFNLK EIEAGIAAGD YQELNGVKVV
301 DGRKGAGNNY TRYIPIPNSP HGVNAAPDKR HIMINGKLSP TVSVIDVEKV DALFADNADP
361 RSAIVAEPQL GLGPLHTAFD NKGNAYTTLF LDSQVVKWNI AKAIEAYAGA DVDPILDKVD
421 VQYQPGHNST SMGETAEADG KWLISMNKFS KDRFLNVGPL KPENEQLIDI SGDKMKVVHD
481 GPTFAEPHDS IIVHRSKVNP VNVWDRNDPM WEDARQQAAA DGVDLEEGAE EPIRDGNKVR
541 VYMTSVAPTF SLEKFTVKQG DEVTIYVTNL DDVDDVTHGL CMANFGIAME VAPQATASVT
601 FIADRPGVHW FYCQWFCHAL HMEMRGRMFV EPRGA
SEQDB ID: 3101377GXL
Reference:
3101377
Name: nitrous oxide maturation protein, Isotype: NosD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosD, Linkage: megaplasmid
Sequence:
1 MRWPLLIATL IASPLWAADW DVPNRAGAIS ETLAQAADGD TLRLAPGIYA ETLVLSRPVT
61 LDGMGRATID GQGTGSVITV TGPGVTLRGL TVIGSGSDHD GIDSGIQLTK TARAPVVENN
121 VLIGNLYGVD IHGAKDALVK GNRIEGRQDR RMNARGNGVY VWNAPGAVVE GNDIQYGRDG
181 IFVNSSRRNL FRDNLFRDLR FAVHYMYADN SEVSGNVSIG NDLGYAVMFT SRVKVVDNVS
241 IGDREHGVML NYANDSVISG NVVKGAKEKC TFLYNANKNE FTNNWFEGCG IGIHFTAGSE
301 RNRIVGNAFV GNRTQVKYVS TRWVEWSEDG RGNYWSDFAA YDVNGDGIAD APYRPNDSMD
361 HVLWTQPAAK LLLGSPAVQL LRWSQSAFPA LLPGGVIDSN ALIKAPEPSA LKKVPHDG
SEQDB ID: 3101377GXM
Reference:
3101377
Name: ABC transporter, Isotype: NosF, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosF, Linkage: megaplasmid
Sequence:
1 MTDKALTIET LCKDRGPTRV LSDVSLHVAP GERVALLGHN GAGKSTLIKS ILGLTRIDGG
61 SIRIGTAAPG SAQARRETAY LPEAVSFHPA LTGREQLRLF ARLSGERADV SGLLERVGLA
121 DAMDRRIGAY SKGMRQRLGL AQVLLGKPRV ALLDEPTSGL DPISRQDLYA IIDELAGQGA
181 AVLIASHALT EVEARTDRIA ILRKGVKVAD DTLANLSALA GLPIRLRVRA RENADALAAR
241 LGGSRVNGAS VELLCDPADK MTALRSIAAM GEAVVDVDMT PPRLEDLYRH YAKETLQ
SEQDB ID: 3101377GXN
Reference:
3101377
Name: nitrous oxide maturation protein, Isotype: NosY
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosY, Linkage: megaplasmid
Sequence:
1 MTRFLAVAQT EMLILRRNRW LLVATLIMVL FALALTFAGS APTGTLGVDM LTVSVASMTT
61 LSVYLAPLLA LMISFDAVAG DMDRGSLPLL LSYPAGRGEI LLGKFAAHLA ALAFAMTVGF
121 GTAGAVAAWF GGAGPESLMA LLRLILTSIL LGAAFLALGY LLSATARGSA AAAGLSAGLW
181 LVFVVLYDLG LLGAVVMDKG GTFTQSVFPW VMVANPADAF RLWNIAATEG VAMASGMTGA
241 AQALPVWAAP ASLLIWPVLG LLLARAAFRR VEP
SEQDB ID: 3101377GXP
Reference:
3101377
Name: nitrous oxide reductase accessory protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nosL, Linkage: megaplasmid
Sequence:
1 MRTLALIALI ALAACKEEEA AAPPVPVDLT ESALSYFCQM NVAEHGGPKG QIHLKGHPAP
61 LFFAQVRDMV AYLKSPEREA EITAVYVSDM GAARSWAEPG PGNWIAADSA LFVTGADVAG
121 GMGAPELVPF ATPEAAARFI ARHGGQALPL NDIPDAAVLG PVDLTQPLAT PVL
SEQDB ID: 3101377GXQ
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MFKNRLILTI LAAGLALPAL ADGDADKGKK VFNKCKACHA VGEGAANKVG PQLNGIIGAA
61 AGQVEGFKYS DALIEAAAGG LVWDDESLAA FLAKPKDFMK GTKMSFAGLK KEDEIENVIA
121 YLQGF
SEQDB ID: 3101377GXR
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEPVQAEDEG LSPEALEAPD GETLGKMIRD ARKDKGLTLE EAARSAAIGR STLSKIENNQ
61 TRPSFDIIRR LMQALDLETP QLFVQSGKSD ISGRRDFTRK DQGEHQVTGT YDHELLCTEL
121 TSKRMLPYIS TIKARDVSEF DTWVRHRGEE FMFVLSGELT LYTEHYRPLP MKAGDSVYYD
181 SGMGHGCVST SDEDARVLWV SLEG
SEQDB ID: 3101377GXT
Reference:
3101377
Name: Gly cleavage system, Subunit: T protein, Class: EC2.1.2.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gcvT, Linkage: megaplasmid
Sequence:
1 MTDTPKRTPL YDLHVELGGK MVDFAGWEMP VQYPMGIMGE HKQCREKAAL FDVSHMGQVI
61 LRGDDIGAKL EKLCPQVFLT LPEGKARYGF FTNAEGGIMD DLIVSNAGEY FFVVVNAALR
121 HQDIPHLAAH LDGVEVTEIF DRALVAVQGP SAEDVVGRLC PAARDLKFME TMLGEIDGVD
181 CRISRLGYTG EDGYEISIPE GEAIRISRLF LAHEDCEPAG LGARDSLRLE AGLCLYGNDI
241 DNGTSPIEAS LLWAIQKRRR EEGGFPGAGR ILKEIAEGAP RKLVGIKPEG RAPARQHVEI
301 QSLGGETIGE ITSGGFGPTV GAPVAMGYVA SAHAAPGEKV NLIIRGKAQP AEIVALPFVA
361 QNYKR
SEQDB ID: 3101377GXU
Reference:
3101377
Name: Gly cleavage system, Subunit: H protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gcvH-2, Linkage: megaplasmid
Sequence:
1 MSTRFLQNLA PACGNRNILS EGSTNMTIYY SEDHEWLSVE GEIATLGITK HAADQLGEVV
61 FIEQKEAGDA FAQGDEIGVI ESVKAASEIY APVDGEVVEV NEELADNPGA LNDSPEGDAW
121 IYKIKLSDPA QLDGLMDLAA YTDMIG
SEQDB ID: 3101377GXV
Reference:
3101377
Name: Gly dehydrogenase, Class: EC1.4.4.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gcvP, Linkage: megaplasmid
Sequence:
1 MAFKLTDYEA YDFANRRHIG PSPREMADML QVIGFKTLDQ LIDATVPPSI RQKEALDWGP
61 AMTERDALYH MKQVASKNKV LTSLIGQGYY GTTTPAPILR NILENPAWYT AYTPYQPEIS
121 QGRLEALLNF QTMVSDLTGL DVANASLLDE ATAAAEAMAM AKRSSRSKAN NAAFFVDKNC
181 HPQTVAVIRT RAEPLGVDVQ VGDPSELEAG AVFGAIFQYP GTYGHVRDYT AEIAALHEHN
241 AIAIVAADIL SLALLKSPGE MGADIAIGST QRFGVPMGYG GPHAAYMATT DKLKRAMPGR
301 IIGVSIDARG NKAYRLALQT REQHIRREKA NSNVCTAQAL LAVMASMYAV YHGPDGIKAI
361 AQSVHRKTSR LAAGLEEHGF KVAPEVFFDT ITVDVGPLQK TVIEAAVARG VNLRKVGSDR
421 IGISLDEQTR SETIEAVWGA FGIDKKDDSV KNRAYRLPDY ALRETPYLTH PIFHKNRAEA
481 EMTRYMRRLA DRDLALDRAM IPLGSCTMKL NATIEMIPVT WPEFANLHPF VPEDQAQGYL
541 EMIDDLSEKL CQITGYDAIS MQPNSGAQGE YAGLMTIRNY HAAQGQGHRN ICLIPTSAHG
601 TNPATAQMVG YQVVPVRSDD HGNIDLADFR AKAEQHSANL AACMITYPST HGVFEETVRE
661 VCDITHEHGG QVYIDGANMN AMVGLAQPGE IGGDVSHLNL HKTFCIPHGG GGPGMGPIGV
721 KAHLAEHLPG HPEYGTAVGP VSAAPFGSPS ILPVSWAYVL LMGGAGLTQA TKVAILNANY
781 IAARLKDAYP ILYTSATGRV AHECILDTRP LNDEGGVSVD DVAKRLIDSG FHAPTMSWPV
841 AGTLMVEPTE SEPKDELDRF CEAMLSIRAE AQQIIDGKID PENNPLKHAP HTVRDLVGDW
901 DRPYSREQAC FPPGNLGVDK YWPVVNRVDN AYGDRHLVCT CPPMDAYEEA AE
SEQDB ID: 3101377GXW
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLADLFRTAN EILGAHAYRV SVHRLAAQPC ADPRRWTRRT VILLGDIRTR WSVADPLLPV
61 LRVLLAQAPR RVLVGGAVFL LRDAGLARNC ALAIHSNFCA AAAEEGLEGL PDAPLFHSDG
121 PVSSAVSGFA AVPLMLDLIA EDHGQVSADA LRAYLGLPAP QSQPRSRLSL GLLQRARGDR
181 LIERTLTLMQ EHIEEPLRIG DLAGMLGVST RKLQRQFLDL TGEGPLAAYR ALRIERAQQL
241 LEQTNLPLTE IIAATGFGTH SNLARWMRKE TGASPHILRQ RALSGRAA
SEQDB ID: 3101377GXX
Reference:
3101377
Name: catalase/peroxidase, Isotype: HPI, Class: EC1.11.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: katG, Linkage: megaplasmid
Sequence:
1 MDGNDAPNAG QCPVMHGHAA GTGMRNHHWW PNQINLKVLH QHSSKSDPMG AQFNYAEAFK
61 SLDLDALKAD LTALMTDSQD WWPADYGHYG PLFIRMTWHA AGTYRTADGR GGGSTGNQRF
121 APLNSWPDNG NLDKARRLLW PIKKKYGDKI SWADLLILTG NVALESMGFK TFGFAGGRPD
181 IWEPEEDIYW GSEGEWLAPS DTANSRYSGA RDLENPLAAV QMGLIYVNPE GPDGNPDIVA
241 SGHDVIETFG RMAMDEAETV ALVAGGHTFG KAHGNGPASA VGPEPEAAPI EAMGLGWLST
301 HGSGKGADAI TSGIEGAWKP HPTTWDMGYF KVLFKYDWEL TKSPAGANIW LATNVEDEDM
361 VEDAFDPSKK HRPMMTTADL SLRYHPKLLP HAKRFAEDPA AFADAFARAW FKLTHRDMGP
421 RARYLGKEVP AEELIWQDPI PAGTQIDADD AAALKAQILA SGLSVSDMVS TAWASASTFR
481 GSDMRGGANG ARIRLAPQKD WEVNEPAKLA RVLGVLEGIQ AGFSSGGKSV SMADLIVLAG
541 CAGVEQAAKA GGHQIEVPFT SGRGDASAEQ TDAESFAVME PVMDGFRNYQ ARELSTSPEE
601 MLVDRAQLLG LSAPEMTVLV AGLRVLGANH GGSAHGVLTN RPGVLSSDFL TNLLDMGTEW
661 KPSGKGVYEG RDRASGAARW TATRVDLVFG SNSQLRALAE RYAQDDAEAS FVADFVAAWV
721 KVMNADRFDL T
SEQDB ID: 3101377GXY
Reference:
3101377
Name: Asp racemase, Class: EC5.1.1.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRRVVGILG GMGPEATILL QQRLLATVRA ADDADHLPLL IDMNPQVPSR IAHLIQGTGT
61 DPGPTLAQMA RGLEQAGATA LGMPCNTAHH YAPAIEAAVS IPLLNMVSLS VARARALVAP
121 GARVGLLASP AVRMAGVFDA ALAEAQLTPL WPEDADRMLT AIRTIKAEGP VPAARAILTA
181 AAEELADKGA ALIFVACSEF SLIADSLPSS PPVIDTVDVL AEAIRDHTLA KP
SEQDB ID: 3101377GY
Reference:
3101377
Name: flagellar biosynthetic protein, Isotype: FliQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliQ
Sequence:
1 MMSEGLFYDT VRQGLWIAVI TSVPILSVAL IAGLAVGLFQ ALTSIQEMTL TFVPKLAAIV
61 IVFWISMGFM TQTLVNYFTT TLIPLISGGV
SEQDB ID: 3101377GYA
Reference:
3101377
Name: FAD-dependent oxidoreductase/aminomethyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKSRTRVVVI GGGIAGCSTL YHLTQEGWTD VVLVERNELT SGTTWHSAAQ VTNFGMNQTM
61 VGLKSHSIAL YKALAENPEY PINYHHGDGG IRLANTPEQM QGYRHFTSMA RGMDVHFEVI
121 DAQECARRHP LISTENLLGG LWDPLDGDID PAQLCQALAY HARKAGAEVY RNTPVTALTQ
181 HKDDTWTVHT ENGDIDCDIV VNACGYRVNE VGAMMGVHHP VASMEHQYFL TEDIPEIVAA
241 GHRMPLIRCP ISDYYCRQEK SGLLIGFYEQ DCQTWGMDGI DPNFVNALCP DDLDRVMDVL
301 EGAFARMPAL RETGIRSIVN GPITYTIDGA PLIGPIPGKR NAFCAIGLRA GLGEGGGHGW
361 LLAQMIVHGE ACYDTWCIDP RRFTGHANVE LTALKAIEDY QNEFRFHFPH EHRPAGRPAK
421 TTPLTPVLAA EGAEFTVVNG WERVDYIKPS PEFHPSLTFD FDEAFDVVAA EVKAVQNSVG
481 LAEVNGFNRI EITGSGRHAF LDRMFCGSVT KRAGRVGLGY LLNHHGMIKA EATIANLPAS
541 DRGPARVWYG SAAASEFHDM DWLSQHIQPG EDVQLRSLTN DQTILVLAGP RARAVLSACA
601 RGDWSREAFP WLSVRECFIG FAPATVMGVS FSGELAYEIH IPNASLYAAY LALRKAGEAH
661 GLTLFGARAV ESMRMEKGFL HWKADLITEF DPFETGLSRF VKLDKGAFIG KPALLDRQSD
721 GPRKMLVTLQ IATDRAPARG GASLMVGQRV VGTVTSGDWG HRVGMNLAYA FVDPELAEPG
781 SEMMLDLCGD MVAARVIAPS PYDPDHARMR G
SEQDB ID: 3101377GYB
Reference:
3101377
Name: Arg(Me2) dimethylaminohydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDPTYEFSR AITRRPAPSV IDGLRAEDIG TPDLGRMQKA HDHYVATLKS TGAEVIELPP
61 LDAYPDALFV EDTALCLPRG AVLMRPGAPS RMGEVAEMAP ALRACYGELR EIAGPGHIEG
121 GDILVTGREI LVGRSDRTDA AGVAELAGIV SDWGYTLREV FTPPGVLHFK TDCSLLDGET
181 ILATERLDAS GCFDGYRVIH TAPGEEAAAN TIRFNKLVLM PAGFPKTAEI LDKAGFEVVE
241 IDNSECAKLD GGMSCLSLRF
SEQDB ID: 3101377GYC
Reference:
3101377
Name: thiamine pyrophosphate-dependent enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTVGEALVA GLAARGVTCV FGIPGVHTIE MYRGLAASGI RHVTPRHEQG AGFMADGYAR
61 VSGRPGVAFV ITGPGVTNTL TAMGQARADS VPMLVVSGVN TRASLGRGMG HLHELPDQLG
121 LVSQVALEAH RVSQADQLAP ALGSVFDRLA TGRGGPCHIE VPLDVAGSGF DGALPAATPA
181 LPDEPEAALL DTAAARLDAA RRTVILIGGG AKGMETALQA LAERLDAPVV QTVNARGLMH
241 GHPLTVAASP SLDAVRALIS GADRVLAIGT ELGPTDYDMY ATGTMPSMAG LIRIDICDAQ
301 LARHPADLTI RGDAGATVVG LLARLPEGAR THDGASRATA ARHAAREEIG PYMRSMVEML
361 EAARDAVPGA LMVGDSTQPI YAGNLVYDHD RPGGWFNAAT GFGALGYAIP AAIGAAIAAP
421 ETPVICIAGD GGAQFSLSEL MVARDEALPI TFVIWNSRGY REIDMSMRAV GVEVVGCDPT
481 PPDFAAIAAA CGMPYATCAA GDPAGFAAAL AEARRHAGPT LIEIDAPYAP EQD
SEQDB ID: 3101377GYD
Reference:
3101377
Name: Asp aminotransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTTAITRRL TDLGGAKWGI YLRAKAMIAK GADVISLTIG APDVPPPAEL MDVAEAAMRA
61 GRTTYSDGAG EPGLRAALAE RYSASTGRAI SADQVMCFPG TQTALYAVLM GVAEEGDEVL
121 VGDPMYATYA GVIRATGADL VPVPLRPENG FRITAADIAA RITPRSRAIL LTTPHNPTGA
181 ILTPEDIAAI GDLACKHDLW IISDEVYEQL VFDGQGFSSP LAQPDLAERV IVVSSISKSH
241 AAPGFRSGWC IGSEAFTAAL LPLSETMLFG NQPFIADMTE AAVRNGSSVA PGMRARYAAR
301 ADRLAARLNG RTCLHVLKPQ AGMFAMIDVS GTGMTGEAYA AHLLDHAGVA VMPGASFGDT
361 IDGWVRVALT ADDAAFDTAC ERIAAHAAEF QSEDA
SEQDB ID: 3101377GYE
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MESSRRSFTR ESAEHRREAL IRATLTLIGR KGVQAATVRS IAEEAGVTLG LIRHYFDGKD
61 ELIYAAYQAH MSQLTDATMD CPRQAGEPAA HQLARIVRAS LTPPVSSPQA VGLWAGFLNM
121 VQRDPRMAEV HSRTYYDFRD RLQALIAPAL EEAGETPSPE QLRALAIACN AVIDGLWLEG
181 GALPEAFDPG ELVNIGLTSV GAILGLTLND PGEEA
SEQDB ID: 3101377GYF
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTATQKLTPE AGAASDLAGT LLIEDLHKSF GDLEVLKGVS LTANRGDVIA IIGGSGSGKS
61 TMLRCINFLE TPSAGRIVIG GEEIQMRADG TAANRKQLER VRTRLAMVFQ SFNLWTHRTL
121 LENVIEVPVH VLKMPRAQAI EKARALLERV GLAEKEDTYP LFLSGGQQQR AAIARALAVD
181 PAVMLFDEPT SALDPELVGE VLSVMRDLAA EGRTMLVVTH EMNFAREVAD HVIYLYQGRI
241 EEQGPPAQIF GNPQSERLKQ FLKSIN
SEQDB ID: 3101377GYG
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNFKTSLLAG LAALALSAGA AAAEEVKIGI AAEPYPPFAS PDSAGNWVGW EIEVIDAVCK
61 AAALDCVLTP VAWDGIIPSL TGKQIDAIMA SMSITEERMQ TIDFSNAYYN TPAVIVADKS
121 LDIDASPASL AGKIIGVQAS TIHQAYANAY FGDAEIRVYQ TQDEANQDLY AGRIDATQAD
181 SIAMADFVAT DAGQCCEIKG NVANDEAILG KGVGAGVRKG DDALREALNK GIAAILADGT
241 HEAITARYFA APIYSE
SEQDB ID: 3101377GYH
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEGLLDLLGL AKSAELLSLS PPGWGMNLLR GLGKSLQIAF GAFGFGLVIG LFGAYGKLYG
61 GPVVRDLLAI YTTVVRAVPE LVLILILYFV GTDLINRASE ALGYGRVEIS GVAAGIWVLG
121 VVQGAYSTEV LRGAILAVPQ GQIEAARAFG MPPVMLMRRV TIPAMLSFAL PGLANLWLIA
181 TKDTALLAVV GFSELTLETR QAASSTRAYF TFFLAAGGLY LMVTLMSSAL FQLLERRSRR
241 GQPSLKGAGR
SEQDB ID: 3101377GYJ
Reference:
3101377
Name: polar AA uptake family ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MMRLIRPMLM PHRLVLIALA VALALWCALT LRWDWLPKYL PLAMEGLWRT VWLLAASTFL
61 GFLLAVPLGF AQAVGPWYLA VPARVFCTLI RGTPLLLQIW LLYYGLGSVF PQIDGIRDSV
121 LWPYLRQAWP YALLALTLSF AGYEGEVMRG AFSGVNRGQL EAARSFGMPR FTLFRRIWLP
181 QAINNVLPTL GGETILQLKA TPLVATITVV EIFAVSSRVR QDTFVIYEPL LLLALVYMVI
241 AGLIALAFRW LENRVPTRRP GG
SEQDB ID: 3101377GYK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTMSRISHIE LDDSNLPPPT PEIEQERKVA IYDLLEENSF ALPARDDRAV PEGPYRVNLS
61 IRDKRLVFDI QTEDEEKAAE FHLSLGPFRQ VVKDYFQICE SYFNAVKTLP PSQIETIDMA
121 RRGIHNEGSR VLQERLDGKA EIDTDTARRL FTLICVLHFG G
SEQDB ID: 3101377GYL
Reference:
3101377
Name: arsenate reductase, Class: EC1.20.4.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: arsC-2, Linkage: megaplasmid
Sequence:
1 MVHPLPQSVL FCCDHNAVRS PMAEGIMKKF YGTGTYVQSA GVHNDMEIDG FCIAVCQEID
61 VELARHRSRS FDMMQEWGDD LSSFDLVVAL SPASQRRALE LTRFFHLDVE YWPIMDPTGL
121 GETRAEKLHH YRQTRDQIIK HLKERWGEPT ERS
SEQDB ID: 3101377GYM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSETVKRYFD AFNAGDVQGM LDCLSEDVAH HVNEGQIRVG KEKFAEFCAH MNRCYKELLT
61 DIVVFEAEGG TRAAAEFIVN GTYLQTDSGL PEAHGQTYRL PAGSFFTLEG GKISRVTTFY
121 NLADWVKQVS NG
SEQDB ID: 3101377GYN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAEVTGVRAL TGAALDAALE DVARLRIAVF RAWPYLYDGD LDYERDYLQA YRNSDRAIVV
61 GAFDGDRLIG ASTGMPLADH ADDFAAAFAD SGLALDQVFY CAESVLLPDY RGHGVGHRFF
121 DLREGHARAL GFAKCAFCGV QRPADHPLKP DSYRPLDAFW RARGYEKLPG AVAHFSWKDL
181 DQENETDKPL QFWIRDL
SEQDB ID: 3101377GYP
Reference:
3101377
Name: hydrolase, Isotype: carbon-nitrogen family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKIATAAYPL DWLDSWAHYE DKLAGWVSEA AGQGADLLVF PEYGAMELST LAGPAVAADL
61 ERSIHAVSER MEEAAALHLK LAGEYGVHVL GASAPVSTGD GRPVNRAELY TPGGGRDHQD
121 KQIMTRFERE DWDIVPGGPL KLFDTELGRI GVLICYDSEF PLLGRALSEA DILLVPSCTE
181 ALAGYSRVRI GAMARALENQ CVSVMSSIVG NNDWSDAVDR NTGMGGIFGP PDKGFPGTGI
241 LAEGQLNRPG WTYAEIDLTA IAHVRADGGV LNRSHWVEQD GRAQSVTNSC LSAKAPLN
SEQDB ID: 3101377GYQ
Reference:
3101377
Name: translation initiation factor, Isotype: IF-1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: infA, Linkage: megaplasmid
Sequence:
1 MAKEDTLEFP GVVKELLPNA TFRVELENGH EIIAHTAGKM RKNRIRVLAG DKVQVEMTPY
61 DLTKGRINYR FK
SEQDB ID: 3101377GYR
Reference:
3101377
Name: maf protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: maf-2, Linkage: megaplasmid
Sequence:
1 MAFILGSGSP RRLDLLAQLG ITPDAVRPPE IDETPAKGEL PRAYCTRISR EKVAAVEAGP
61 DDIVLCADTT VALGRRILGK PADADEAARF LRSLSGRRHR VITAVAVRRG GRLWERDVVS
121 QVKVKRLSEG EISAYLTTGD WQGKAGAYAI QGPAGAFVPW ISGSFSAIVG LPLAETAVLL
181 AAAGHSKFKG DT
SEQDB ID: 3101377GYT
Reference:
3101377
Name: RNase, Isotype: rne/rng family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKGRTIVLDH IAGREAAALM VDGQLDDFLI ASDAPPPGTI YRARADRPVK GQGGMFLTTP
61 DGPAFLRQVK GLAPGAHLLV QVTGYAEPGK AIPVTAKLLF KSRYAIVTPG APGLNLSRNI
121 RDEAERDRLL EIAHEEMEGH GFGLILRSSC AEVEGEVIAE DIAAMIAQAQ QVLEDDGKDC
181 ETLIEGDGPH VLAWRDWTDP AEVVTAAGGF EDHGVLDALE RVRGIAEPLP GGGHLYIQPT
241 RALVAVDVNT GSDTSLAAGQ KANFACAKLL PRVLRIRGLG GQITLDLAPM AKKDRRGFEA
301 ALRAALKADS EETTLAGWTP LGHYELQRKR GRVPVAEALS
SEQDB ID: 3101377GYU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTCPICGSKT APSYRPFCSK RCADLDLAKW LNGSYAIPAS SEDEEEPLDQ EAETPVAPRH
SEQDB ID: 3101377GYV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTFDFFEGPA GSGKTFSMVA HARQLIESDA LGEGQRMLAL TFMNGARRRL TSNLNAEASF
61 RRKFDCLTFD SFAQSLAKRR SAKLTDEMRQ QAEELGQFHG PCFLACELLN DVEVRRWVAR
121 TYPLVLVDEA QDLDVHRQGI VLGLKECCTT VVAADSFQCL SDGQETADFI DRLLRAGTTH
181 TLTQSHRTNK AGLLAAALAV RNGEDIRAVL NEEAIGKTNR VHWIGEGIEL VEVPATARNS
241 GLLAWNLAFQ LRLGSDDVAL LTPDSANTII RNAIGTVASK QRPWPHNAFS VSWEGGDSSV
301 ADELAEAIGF PDTAPYDEVC ALLEEHSAQP MVKTVIRRIR RLQRVTGQSE FEKAQLVSFI
361 SDAVRTNTRL GFKKSAKIKA MSIHGAKNRE FDRVIVLWPQ SATGSDEHKR RLLYNAMTRT
421 KNHCTVIVLG TGRLNSAPFA P
SEQDB ID: 3101377GYW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHIHRLKVSG LRGIQNADIT LGKHSVLVGP NNNGKTTIVE ALALLLGRDR LVRRLTEHDF
61 YQSRPIETSR ILIIATISGF PENDPQHSPS WFAMGRGGVE KWLNPATGDL AASADGEHTD
121 LSVQIAFAAR YDLQELEAET IRFFVDDEAT LGDPFHDETS YTQISSKTLQ ELGFFMVPAS
181 RTWDKWISFT SELFRRLVAT LGGLPATAIR DARERLWEPE VGQRLEEQDG LTAIVEQANS
241 ELGKLMPSSP RLRLRITGTD SNSVLESVVP HFAHGDGPTL PSARHGTGLT SLQSLLLLMQ
301 FGKARADANK SFVLAVEEPE LHIQPSQQKR LVNRLNALCD QTIVTTHSPL VAAMFPVEAT
361 YFVDNDDGQM SVSPLSKTAP AGPTNHKQHL FFAWRQKLIA ALMHQRVLIP EGISDVAWLE
421 ALQTALELRQ SWDSPEDEQS KFSTFVGVVP TDDAKIAETH DVVRRVHHHC AILVDGDQAG
481 RDYLAELNAA DPSPSAAIIW QTDWKIEHVV AWIAEANLAL VLPQLAEANS TAIENAAELS
541 AFLESRKSYA PTQEITSAIL MGESACRKRA AQLLNALCDT LLDPSVQSSP LFVRETEDGA
601 VMPTFRFEPP DDV
SEQDB ID: 3101377GYX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKIGGRDDFE NRYMGKFRAL AANYGVFVEY ERDRAGRDIG LHLTQPDSNR DGKIVTPALI
61 WFQMKGIMDG TLSREEYDAV EEVALDLEVA HLRFWYLNVQ PTYLALYIES VDRFLAIDLQ
121 KWVGAHFGAD ILTLEQKTVR VKVAKKNELD NEFFRTVLHG NLVPILRQSL RNENDKEIAR
181 FLRDSSVVQW LSRCQQQGIQ ARLTVVKWIS KMRTEAYFEA REQDGDWELF RTHWQYSMGE
241 LALAFPYVKF TPETRAEMVR YPETIEDFDG NEFQIWHESF IAIETETGME IDDDELEGEC
301 LLELGDGEFS FGDMGGGEIV EHRLALELNE IGVRWAETLA VLVKAEVLSV DSEPHMVSVA
361 PWHARDV
SEQDB ID: 3101377GYY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDIVTLKAI CDELKIDPRE ARERLRSAAS DAKANPELAK ARKPRTPWQW VKGSAAEKEA
61 RKALAT
SEQDB ID: 3101377H
Reference:
3101377
Name: RNase PH, Class: EC2.7.7.56
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rph
Sequence:
1 MRPSGRDLSE MRPVSIETGF TKHAEGSCLI KMGDTHVLCT ATIEDRVPPF IKGSGLGWVT
61 AEYGMLPRAT NTRMRREAAS GKQGGRTVEI QRLIGRALRA GVDRVALGER QITVDCDVIQ
121 ADGGTRCASI TGGWVALRLA VNKLMKAGDV ISDPLVDPVA AVSCGIYAGQ PVLDLDYPED
181 SEAGVDGNFI MTGSGKLIEV QMSAEGSVFN RAQLDQLLGL AEKGVGELVA AQMAATA
SEQDB ID: 3101377HA
Reference:
3101377
Name: flagellar hook-basal body complex protein, Isotype: FliE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDIRSLSAAQ AYASARPATQ ADPKDDSATQ GLRGTFQDFA ATLQHSEELA QSAMIGKADP
61 HALVQALAQS ELAVETAVTV RNKVVEAYQE ILRMPV
SEQDB ID: 3101377HAA
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPRMSIQSRV SRNIQRIRRE KDLSQEEVAH RADIHQTYLS GVETGKRNPS ILVVERIAKA
61 LGVDVSEIFK PN
SEQDB ID: 3101377HAB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRQHFRVSKQ MRSRNTLDAA KAQIAAGRKV ILTYGIGEDG RCSCKRDDCP SPGKHPLSKY
61 FPNGVYSATD DIELVQKALR THPRANLAIS LAGLTVVDVD GKAGKQAVEG LDLPKTVKVF
121 TGRGYHLYYQ GECSGGAFKG DEIDVLTGAN RMVMVPPSTH PSGKRYRYSS QSPSGMAAMP
181 KNLSKLKPDR TQHRKEGPQT ASTDLVIKSG SRNDFFFRTA CFLRRRFDDK NAVEAMLETL
241 NNDFTEAPLS PSELRSVIQS SGNYVEDTAA LFGPPKTTEP LPMEFLYYPY IPYFGVTLLA
301 GNPGMGKSLL VSRLIAAVTS GSPWPLSDEC APKGKVLLLS AEDNWQRVTL GRLLEHGADI
361 SQIRMMQRFK ILCPDNLEAM ARYIDEERPK LVVIDTLTAY MGSGRDMNRQ NEVGEFLGRL
421 TEIAEDAGCA VLAIGHLNKQ SSEHPLFRIV GSIGFAASIR SALFYGTDPT DRSRFALAHG
481 KANASELGKT IIFERFGGGR DETPVLHPVE FSDANEAEVC RVETNSVGRP ASATDSAREF
541 ILEFLSDQPV RWEAVESAVT SRSLASVGTL NVLRADMAKS GEIVQVGKGK STRWKLGEPR
601 TDE
SEQDB ID: 3101377HAC
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKRKLTTKFI ESQKPNPSKR LDFRDELMPG LVLRISTSGT KTFCLHKRIS GKMRRLTIGR
61 FGVVSLAEAR ERVRKVLYEI ETGRFEDRTG VEVETKPTLG DVIPDYIEKH AKVHNRDWKR
121 KEALLAKFAA LHVKRIDEIK RADVVKACDL IHKSAPVSAN RALAHLKHLM GWCVERGMID
181 ASPIAGMKPL SKERSRERVL TDDELGALWT ACDAEGYPFG DCMKLLILSG QRRAEVAEMR
241 WTELDLEKRL WTLPSQRAKN GRQHTVPITD AMIDVLRRVP RFLGSDYVFT TTGKSPVSGF
301 GRLKDRLDKA LPEGTEPWII HDLRRTMSTN MAMLGVPQPV TEALLNHKTG VVSGVAAIYN
361 VYSYTDEKCE ALEQWNRHLT KMTQGHSDRL AGKMSAQFSA
SEQDB ID: 3101377HAD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRLKVHAPVP NSIRTREEKI LARFPKSSSL LNSVRSRTDR YKFGISDREV NKFYRFSDYK
61 NSESFFAHKF RQFGKNYIDK TDVEIDIANS VNTIGPGTES LPPADRFIGL AKKFSGELLQ
121 ARQLKTPYVS ILTGPTGSGK TAYSKCLFSS GAQVFWANGI IPSRVEFTKF FKAGQELSSQ
181 QILDAIHQCQ TRDLLIYLCF SEVGVPSKDA LEGILSSHGE YREHHNKIRG MVALAEGKKI
241 DGSSFTLSEA HNIWKEQVGY FPEEVCRNIL GKIKSPSFHI QFLVSLDGFD ALKTKDFLIS
301 DRYHGPISAV ADLLSDALNQ VARYGGTPSS HNTNLVVFMR DTTYARIRLE LNLTPNGERR
361 IPVRWIVPPP YKILAETIVS AVDGDVSSSV GQEGLDSFVV NVRKNLINVL KGTSVGLSIN
421 QPISSAFSWN ARHMKRHIRR ICIWSLENYL ISHGDQLDER QKSAGLSEAW LWEKTINNRA
481 LKDMAAYSVL EAFFLDDTKC LQSKFRLNSR EISNFLEGSD LVSALAAIDE RPELEGLFDS
541 IFNYMTKGLD ESEGKCYPHT LVFVRILQIL KFDPGITIED LHDEISCFYD NISLEELRFY
601 TICLCENEYV VFEGVENSAS LDECRFFVSN FGFILLNKVI YSVSYFSQSL MISELIRSGF
661 GTHFRERNFR TNEDWIANCV FNSIIAYNIV QDAEIGERKC RQSAGKDFEK FSLCKRLRES
721 LIWEAQRIFS RRRFSGNLEW HFNNIPEKLK PLLGEFPNFD TLEEIWK
SEQDB ID: 3101377HAE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MWGTHLKQKG RWWHYYRSVP REFADVERKP LISFSLKTGD FTEAKRMAAD ISARLEQDWR
61 DAKARGVSLC AQDAAEQYRA AAAVQRQFGF APKPAADLTD EELLERLRLL ISGQQSAPER
121 GAVLGLTAEP QYSLSDAFDR FWDYIKDEWI RDSRDQQRVK RNIYLGSRPI DFMLLA
SEQDB ID: 3101377HAF
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo7;megaplasmid
Sequence:
1 METLERQRGL RPDHGGPGHR KRRAQDDHDR RDLSQGTPHC VEPVREKGGR GRQIGRTKGG
61 MNTKLHAVAD AKGRPIGFFM SAGQVSDYTG AAALLGSLPK AGWLLADRGY DADWFREALK
121 DKGIKVCIPG RKSRKKAVKY DKRRYKRRNR IEIMFGRLKD WRRVATRYDR CAETFFSAIM
181 LAATVLFWL
SEQDB ID: 3101377HAG
Reference:
3101377
Name: IS3 family transposase, Isotype: orfA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSMTMDDSIK RWTAKRKTAL VIEIIQGKTT VAEASRTFDL TPSEIEGWVE DAKRGMENSL
61 RANPLDIREQ YEKQLKDLQE AYGEAMLELR ARKKLAALMV SH
SEQDB ID: 3101377HAH
Reference:
3101377
Name: FAD-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKRFSRRAAL LGAGGVAGWG LSRWLGADLP GDGGTSRITA PSGEAWLNDA SGLSATPIHE
61 HLILQHDSGD DLIAAIRREL AEAKADGRPV NVGAARHSMG GQAIPRNGTA ITFDNGSVEI
121 DSASQTYLVH AGARWSQVIA ALDPAGWSPK VMQSNNDFGV AATFSVNAHG WPVPFGPMGS
181 TVRSLRMVLP SGDLVTCSAT KNADLFNLAM GGYGLVGVIV DLEVEMVPNT RLTPTFELMD
241 ASAFGEAFRS ATEDPAVTMA YGRLNVERAA FLQKALLVTY RETADQTDLP AAAGSGWMSH
301 AASRLYRAQL GNETFKSFRW WNETRLGPAL GSGEVTRNTL LNEPVATLDD RNPDRTDILH
361 EYFVGFGAFD GFLAACRDVI PASYQEFLNV TLRYVAQDDQ SALSFATEPR IAAVMSFSQE
421 LTQRAEADMA RMTSALIDRM VALGGAYYLP YRPHATVDQF TSTYPGAGDF ARAKRGLDPQ
481 LVLRNNLWDN YLGQL
SEQDB ID: 3101377HAJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTLQKLSLG YFLALMIAAS LNYVPGLTDE NGLAFGIFAL DIYDDALHVA SALWALVAGM
61 LSHRAARSFL ILFGLAYLGD GIFGFFTGFG YLDLGIFTND PAGIDLSLPR FLANLPHLAL
121 GGVAVWAGYR NAGQTP
SEQDB ID: 3101377HAK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLLWRWTKRL ALLLAVLAIG LGAPVVYVET MCRGNGLTQP YDALISPAHH RPESRTLLTY
61 PEWHIVHAYE DYAKVLSSGD PHDYGFLRAI GGFWNSLCTL SRIAPEHGGV DGGTKQMNYV
121 IGVSFTAELA LKAAYEETLG RLFAALRGPH RAPLDDLSAD QAAAYAKFLQ QVPWYKWQFR
181 EDVKDLRDRP STVLRDSERR LALGLEYRAK AAYADVIAQA VAQVGQDELV LRMIVTGVEA
241 GQLARYQGVR VLQERPEGIE IETPRYRALT HLIQQLAAEK VNLVEIAGND DILFTAISNR
301 PAEPGALFSS ERQGFGDYRH LILVKVPELA ERLRLLNESG LRLEHIHDY
SEQDB ID: 3101377HAL
Reference:
3101377
Name: histone deacetylase/AcuC/AphA family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPVGGWIQPP AAAGHAESPE SKRRFKSLMD VSGLTAQLSV QSAEPVTETD MARVHSEAYL
61 DRFKTLSDAG GGNAGEFSPF GSGSYEIAAL SAGLVKRAVF DVVDGTFDNA YALSRPPGHH
121 AMRDGSMGFC LLANIAIAIE AARAERGLTR VAVLDWDVHH GNGTQDIFYE REDVLTISIH
181 QENCFPPGSG SGSERGAGAG EGANLNVNLL PGAGHQSYID AMDILVLPAL HAFRPELIIV
241 ACGLDANNFD PLSRMTAHSG TFGYLTRAVM GAANDLCGGR LVCAHEGGYA EAVVPFCAHE
301 VVRTLAGVES EVVDPFRAVA EANQPPADFV AFQRQRLECF KASL
SEQDB ID: 3101377HAM
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRLILALAA LVLASVPYWL GGGALALVTE MLILLAIAQS WNLLAGFGGL LSLGHHAFVA
61 IGAYLLFAVT RDLPISPYAM IPFCGVGAAL LALVLTPILF RLREVYFAVG MWVAAEIVKI
121 VVSRMDYFGA SSGLPLFAAR RIDTSLLPSM GYWLALALTA GLCVGLWWLG RSPWGLHVHA
181 MRDDEIAARS LGVKTGRIKA LLFILSAAGS GMAGAIGFMG SLYVSPIAAF DINWTVYAIF
241 ICVIGGLGTI RGPVIGVMLF VALREALSAS PGWNLIALGL IAMLLMIFAP RGIDGLIPRL
301 GNLASKRHFK EG
SEQDB ID: 3101377HAN
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSIVIDILIN GLFLGGLYAL FGLGLTLIFG VMRIANIAHG EIAVAGALAL FTLGGNLPVH
61 PLVLLPVVMV LAFGLGWLLQ AQLINRVLSA DPMPALLLTF GLSVVLQNLM VEIYGADNRS
121 IDIGTIKTAG FQIGGVTLGY LPLAIFLLAL VLFGLLHLGL QHTRLGRAIR ATSQDADIVA
181 LFGIRQKRVF ALVMALAAGF AALAGMLLAM RSTITPFSGA ERLLIAFEVI VIGGLGSIWA
241 SYLGGIALAL VHVASFYFDP ASGLLYGHLT LLLFLLLRPQ GIAGKVVTR
SEQDB ID: 3101377HAP
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSMLEIENLD ARYGDFQALF GISLNVRRGE TIALVGANGA GKTTLLRAIA GLGQYHAGVL
61 RLNGRDIGSA SPQELARMGI SMVPEGRRLF TGMSVAENLM IGADLGRGGH WVRDAVFDLF
121 PEIAVMAHRP AGLLSGGQQQ MVSLGRALMT NPDLLLVDEV SLGLAPVVVD RVYAALAQLK
181 ERKTTLVVVE QDIRRALDVS DRFYCMLSGR VALAGASAPA AFDAVSRAYF GEAA
SEQDB ID: 3101377HAQ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLEARNLSKS FGGLEVLRDV SLTVEPGICL GIMGPNGAGK STLFDLLMDV TRADSGTVSV
61 AGRDVTGLDT AGRVKSGMAR AFQVPRAFAS LSVEQTLYLA QHAGHGVAPQ KAYDKVEAVL
121 EITGLTAMRH QMGGALRLLD RKRLELAKAL AADPQVILLD EISGGLTDRE AAEMVTLVHR
181 LKEAGLAVLW IEHIAHALQA ASDRIMMLAL GRKVIEDTPQ AVVADPQVRA LYLGTPA
SEQDB ID: 3101377HAR
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain AA-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRNQSLNRR SFLAGSAAFI GTLAAPSIVT AASKKLRIGF ISPLSGPRAS FGTSDQWMVE
61 TISKHLSGGL ISGGASHEVE IIVKDNQSNM NRSISVGNEL LLRDQVDMLL INDGDAAVAL
121 GEIADIHGVP TMSTMQPWQA WMFPRGSNPE QGFPWTFHFF WGADDAMSTF TRLWDQIDTN
181 KVVGDFYLDN PVGNAFADPA MGLPGFIERG GYSRVDGGMF KIDADDYSGQ VSRFKEAGAD
241 IVTGFGFPPH WITFWNQAGQ AGYTPKACTF AAAFLFPQAI EAMGDRGDGM TTEVWWTPNV
301 PFASSLTGQT ARELADAWEA ESNAQWVQTL GYSHALFETG LNALVQSGAP KDRAAVRDVF
361 ASTRLDTVVG PVNFADSPIR NTARTQLAGG QWRKSSGKHA FELVITENTL APDIGVESET
421 IALPQV
SEQDB ID: 3101377HAT
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNRYDLSEFV LKLMDKANTH TPLHFQKFMM DLVRDITRFD AAWWGWSLFR GGRIAMVHTD
61 VSDLPEDFEP RVKAQLANDP FVRTGRNLQR YARSITVAEA VTDPSFRDFA GHFNLTQMLN
121 GHCKVRDGRF NFFMSLYRRG AAEPFTDTEN ADFLAILRHI EQALSMSLQL DLGMRVDPNT
181 DWALVDATGE LFLSSTGFQH RAEFSATSRG RVPDLLRAAA ATASHVGRDG AVFTRERYSD
241 DLWLLRLTPP NPWGDLSRRE KLVANCLVQG MTMRQAAERL DVSVNTVRNQ VSSIYRKTGV
301 ENRVQLLRLA NPTLTEAAPD EA
SEQDB ID: 3101377HAU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVIVHLHYIW FSRLLASLAC NATGPADWRG PFQVEEDMPE ALKDIIAAKS RRFEENFARG
61 DVPALVADYY NNDPVVIGQG VATFTGREGA TQYFTGAVEA MKSAKLTTYT IQEGEDSAIE
121 TGGVKLTPRE DGAAQIDLTY VLVWQRHADG WAVHMDYFMP GVVR
SEQDB ID: 3101377HAV
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTIDAQAVAA ASEFEVANPA GGIAGHAPNA TLEDLDRAVA AAQGAFTLWS RQDDATLRAA
61 CEAVTAKIGE HAEELAQLIT AEQGKPLNGL GSRWELGGAQ AWAGYTSSLA LPVKILQDDD
121 AGRVEMHRKP LGVVGSITPW NFPLMIAVWH ILPALRTGNT VVIKPSPLTP LSTLRLVELM
181 NEVLPAGVVN VITGDDKAVN LGAAMSAHPG IRKIVFTGSC ATGQKIMASA ADSMKRLTLE
241 MGGNDAGIVL PDVDPEAIAE GLFWGAFINN GQTCAAMKRL YVHEDVHDAV CEALVAFARN
301 IPVGRGDDEH AILGPVQNAV QHAKLCRLVA AAKNKGNVLL GGESGEGLFF PPTIISGLEN
361 GDPLVDEEQF GPVLPIIRYS DLEAAIAAAN NSPNGLGGSV WSPDIDKARS VAQRLECGSV
421 WINKHGAIQP NVPFGGIKAS GLGVEFAEEG LAEYTDIQVV FS
SEQDB ID: 3101377HAW
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKRREEIEKE LGLDLCPIRT VLAQIGDKWS LLIILLLRDG GQRFSEMQRA IPDISQRMLT
61 QTLRKLERDG LVSRTVTPTI PPRVDYAITT LGRSLFAPIG AMAQWAVEKQ PQIIEARRAF
121 DAAG
SEQDB ID: 3101377HAX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIMSLRTTSA AAALALTALS AAADSAANKE IAVGLLEQGL AKGDRDFIMT HVAEGYIQHN
61 PQAADGREGL LGFVSFLETL DPPVTVNPVR VIADDNFVVI HQEAEFFGPK VIIDVFRFED
121 GKIAEHWDSI QETVTETASG RSMTDGTTKI TDLDKTAENK ALVTGLVKDV LMGGKIDRID
181 DYIAEGYMQH NPFVPDTREG LKGFVAYLGE NNISFWYSEL HLVVAEGNFV FTQAEGVYDG
241 TPTAFYDIWR IEDGMIVEHW DTVQPIPTEF AHENGMF
SEQDB ID: 3101377HAY
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPLPIRDLYT FFVVARAGAM QAAAHELGVT PGAISQRIRS IEDRYGKRLF VRSRDGVSLT
61 ASGKALWKEV KSAFAQIETS HNRHIGKDGK TILRISAAPT FAHSFLVSNL ASFNEDHPGI
121 RFNIETEDRL ADLRSEPIDL AIRHGLGDYA GLRSEWLCAP ELIVVGSPAL LESQHPVKEP
181 EDCLRFTLLP DETGLDWALW FEAHRVNAVA PSYGTAFKDG FLTVKAASRG QGLALINDIY
241 VREELADGRL VQLLPGSWPT KFAYYAVALP ETFDRPAVKA FVKWLCAACA VEQMHQK
SEQDB ID: 3101377HB
Reference:
3101377
Name: flagellar basal-body rod protein, Isotype: FlgC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgC
Sequence:
1 MREAEMSEFS KSLSVTASAL RAQATRLRHV SENISNADTP GYRRKTVPFE VERGRDDGVE
61 RVTTGRVKLD RRQLPDIFDP SHPLADETGH YQGSNVDLMI EIADAREAQR SYEANLKLFD
121 QARQMSASLM ELLRK
SEQDB ID: 3101377HBA
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRAPTINQNW TIVLFGFLAL SLAFSARAAL GLIMPVWQAE FGWSSGYISG VGAAALIVMA
61 GVAPFAGRLV DTRGPGLALN LGMGLLGVGC AVVAAMSSKW MFIVGFAGFG AVGFGIVATH
121 VVATAVTRSF DRNAGLAIGI ATSGATGGQF LIVPLIAALL AFASWRWSFG ALSVMSLALV
181 PCIRASLPPR VETDGGGDGD ARTTMAADFV TIVRLPAFHI LFWSFLICGF TTTGVIETHL
241 LPFASFCGFP PVPSATAYGV LSLVNLFGMI AAGWLTDRMN RPLLLGAIYA LRALTFVFLS
301 NLPGMPIEML FAFALFFGAV DYATVPVTAS LVASHVGLKV MGLAMGMISA GHAIGGAMGA
361 MAGGYLFDQT GNYDLLWTAS LWLAIGAGVM VMFLRERGRQ PAGA
SEQDB ID: 3101377HBB
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTEARKIPKP SFPYGSPGEL NSFLPYLLTR ITHIWSSELN QALASEKLPT PKLRLLSSLS
61 AYGELTVGQL ATLGVMEQST TSRTVDQLVD EGLAARSISD ADQRKRTVVL TRKGKKKLAE
121 ISPLINDFHA ELVGNVDPDK LQTCIEVLGE ILKGKTDY
SEQDB ID: 3101377HBC
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGEAATKSDR QQNQTRLWLN ILRLHGLVFG DLNRQLLDET GLSLAKFDAM AQLARNPDGL
61 SMGKLSGALK VTNGNVSGLV NRLIKDGMVV KAMSADDRRS FSAKLTDAGL TTFKQASEAH
121 NRILAELLRA VSDQDMVEAS AALRGILESM QTGASLD
SEQDB ID: 3101377HBD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDDFPDDMWS TRTKFRHGQC DPAGIVYTPN FFDVFNRAIE EWFDDALQIP YQDVIGRRRI
61 GLGYVAASAT FFTPFMMGDE AEAFVAVDKI GTKSYTLSVH LVKDQREAVR GTLTTVTTNL
121 DAHQSTEIPD DILEALLTYA EAYKLDKD
SEQDB ID: 3101377HBE
Reference:
3101377
Name: indolepyruvate oxidoreductase, Subunit: IorB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKDDTVKLPL RPEADATDRP LSIAIVAMGG QGGGVLTNWI VELAECQGWI AQSTSVPGVA
61 QRTGATIYYV EMMKPGRHGQ RPVLAQMPTP GDVDVVIAAE YMEAGRSILR GIVTPDRTTL
121 IASDHRSLST IEKMAPGEGI ADSGAVTDAI GIVAKRRIVF DMNRMAVENG SVISSALFGS
181 LSASGALPFP REDYHAVIQK SGKGVAASIR TFDAAVAQVE AGEKGEAPGT LEQRDTMPAA
241 LPRSLANPRA NALLQRLRTD LPVEVQAMAY LGLKKVVDFQ DAAYGEEYLE TLAEIAEKDR
301 AAGGDNRGFT FTNTAAKYLA NAMAYDDIFR VADLKTRAER RRRIEDDLKL SEGQIFGTTE
361 FMHPRLEELS SALPAGLAGW LRGKRELYAW LDRRVDKGRR VRTYSLPGFL MLFFLAGLKR
421 LRRRSLRHAE ETEHRTRWLT EATGALQSNY DLAVSILKVR RLIKGYSDTH ARGHSKFDKV
481 MQTIRSISQR DDAAMWADRL LRSALKDGDG DNLDGTIKTI QSF
SEQDB ID: 3101377HBF
Reference:
3101377
Name: indolepyruvate oxidoreductase, Subunit: IorA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAERSFAKEV EHLKLGEGDV FRGEGILAIT KALLQSGISY VGGYQGSPIS HLMDVLADAN
61 DILDDLGVNF QSSANEATAG AMLSASVMYP LRGAVAWKST VGTNVASDAL ANLASGGVTG
121 GAMVIVGEDY GEGSSIMQER THAFAMKSQM WLLDPRPDQE CMVGLIEKGF ELSEASNTPV
181 LLQVRVRSCH MTGEFVCKDN VRPDFTLKDA MNSPKRDLDR IVLPPAAYEH EVEKIERRLP
241 AAIDFVTENK LNEFFGPTGK DKSGKTGLIV QGGMYNSTIR ALQFLGLSDA YGNSKLPIYV
301 MNVCYPTIPS EIEAFCEGLD AVLVVEEGQP EFIEQSITTN ISRLRKPTEV HGKKYLPMAG
361 DYTVTALTKG IGQFLEDYEA SLLGNRAPAP DPVPILTNPA VAALKDVVPP RPPGLCTGCP
421 ERPIFTAMKL VFEELGEHHV SADIGCHLFS ILPPFNIGAT TMGYGLGAAS SAAFNVKGAK
481 RSISIMGDGG FWHNGLTSGI GHAVFNKHDG VFLIIDNYYS SATGGQDILS SRAFNKRRTT
541 NNSIVDAVKG VGAKWVRQID RTYDVNRMRA VLIEALTTDA EGPKIIVASS ECMLNKQRRV
601 KPQVAKALKA GKRTVKERFG VDEDVCTGDH ACIRLSGCPS LSVKELDDPL RDDPVASIDT
661 TCVACGNCGE VADAAVLCPS FYRAEVIHNP SSWDRFKSSF TLPAITYLQK RRARRAVNFE
721 EAAR
SEQDB ID: 3101377HBG
Reference:
3101377
Name: phenylacetaldehyde dehydrogenase, Class: EC1.2.1.39
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: feaB, Linkage: megaplasmid
Sequence:
1 MQVARPDSLV SQILPAVADY LDSPAKLLLG GTSTAASDGR TMDVFNPATG KKLAEVPWGG
61 AAEIDLAVKA AQAALEGDWS RMRPVERQRV LLNLADLIEA NGEELAQLET LNNGKSVMLS
121 RLVEVGNSSN YLRYMAGWST KIEGSTIDVS IAVPPGAKYQ AYTRKEPVGV VGAITPWNFP
181 LNMAIWKLAP ALACGNTVVL KPAEETPLTS LRLGELCLEA GLPPGVVNVV SGTGAEAGAA
241 LTAHPGVNKL TFTGSTEVGK IIGIQAMRDM KRVTLELGGK APMVMFDDMD LDQLSEAARI
301 GILFNSGQTC CAGTRIYAQR GIYDRICETM ANVVGALSVG SGLDPANAIN PMVSAKHQAH
361 VSACIAGGVE EGATPLLDTG AYDGEGYFVR PQIFTDVRQD MRIMQDEVFG PVFTITPFDD
421 PDEAIRMAND TRYGLGASIW TTNLNTMHRY VPQLQAGTVW VNSHNVPDAN MPFGGYKQSG
481 IGREHGRAAL DAYLETKSVC IAVR
SEQDB ID: 3101377HBH
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTTQHTPTP RDNFLRENNG RHQIHPMTHP LIIENRPPRI IVKGEGSYVT DIDGKTYVDG
61 VGGLWNVNVG HNRPEVKAAI TAQMEEISYY SSFAGTVTPP SIELSAKIME MTADEDMARV
121 LFSANGSDAV ETALKLSRQY WKLEGEPERT GFISLKQGYH GIQFGGTSVN GSTLYRSAYG
181 PLLPGCYQVD SPWTYRNPYS EDPEELAEAV ITQIDRLIQH QGAHTIAAFI AEPVQGAGGI
241 IVPPASFWPR LRQVLDKYGI LLISDEVVTG FGRTGAMFGA RGWGVKPDIM CFAKGITAGY
301 IPLGATVINE RVFAAWQKGI DPTGFIMHGY TATGHALGCA AANATLKIVE DEDLPGNAGR
361 MGQRLMEGLK DIPNWSSLVG EVRGKGLMVG LDLVADKDTR EPIDPGKGQG EMVATFARDE
421 GVIVRPAGPV IIISPPLTLS EKETDKIVDA LIKALRRYEE EK
SEQDB ID: 3101377HBJ
Reference:
3101377
Name: nitrilase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLPLQDFPKF TAAAVQASPV FLDAHKTAQK AVDLIAEAAG NGAELVVFPE VFIPGYPYWN
61 WITDPVTGGA WFEKLVRASV FADGPEIDVI RDAARAHGCH VVMGLNERSP VSLGALYNTL
121 LFIGPDGEVI GKHRKLVPTW AEKLTWTGGD GSSLKVYDTA IGPLGGLACG ENTNTLARFT
181 LLAQGELVHT ASYISLPVAP PDYDMAEAIK LRSMSHSFEG KVFTVTATST VSEEIIEAME
241 QVRPNARELL QRKSSAYSGV IGPDGREVVT GLIDDEGIVY AEIDLGKCIQ PKQMHDITGH
301 YNRFDIFDLR VNQRRQTPVA LSGAAVTFTN EHEQADGSTE PASE
SEQDB ID: 3101377HBK
Reference:
3101377
Name: gentisate 1,2-dioxygenase, Class: EC1.13.11.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gtdA-2, Linkage: megaplasmid
Sequence:
1 MAPTEIKPED DILGRARVRD TPELEAYYDD LAKIETGALW TVANDIEPWE PTPKSAPVHW
61 KWSDLRREVL RAIDLVRPED AGRRVVYLRN PQRKDVSAAC GWLFSGIQTM KAGERAGAHR
121 HAASALRFIM EGSGAYTIVD GHKVELGAND FVLTPNGTWH EHGILESGTE CIWQDGLDIP
181 LTNCLEANFY EVHPNDYQTT DIPLNDSPLT YGGPALLPQL DKWDKPYSPL LKYSWEPTYE
241 ALLNYAKASD GSPYDGLILR YTNPQTGGHP MLTMGASMQM LRPGEHTKAH RHTGNVIYNV
301 AKGQGYSIVG GKRFDWSEHD IFCVPAWTWH EHCNTQERDD ACLFSFNDFP VMEKLGFWAE
361 QALEDNGGHQ IVAD
SEQDB ID: 3101377HBL
Reference:
3101377
Name: fumarylacetoacetate hydrolase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKLVTYRDSA AGEGRLGVVV DGQVVDVEWL GEAAGEALPD SMLDLIDMGP DALAAITRAL
61 DATNAARPAG LAVPEENVRL LAPIPRPRKN IFGIGLNYVE HVAESAKSLD TSKELPKEPV
121 VFSKPPTSVI ASGEGIQHNA AMTQQLDWEV ELAVIIGKRA TRIAKDNAMS HVFGYSVIND
181 VSARDNRRAG QWIFSKGQDT FCPFGPAIIT ADDVPDPHNL DLWLTKNGVE KQRSNTRHLL
241 FDIPTLIADI SSGITLEPGD IIATGTPAGV GAGRDPQEWM WPGDVIECGV DGIGVLRNPV
301 VKIGD
SEQDB ID: 3101377HBM
Reference:
3101377
Name: Asp/Glu/hydantoin racemase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSAIQDNMHK TLRIGQIVPS SNLTMEREIP AMMRAREAQF PERFSFHSSR MRMKKVTKEE
61 LKAMDHDSDR CALELSDGAV DVMGYACLVA IMSMGKGYHR ESQARLHQVT VDNGHPAPVV
121 SSAGALVDGL HLMGAKRISI VTPYMRPLTN LVAEYIEAEG VEVSDSIALE IPDNLEVAAQ
181 DPTNLLEIYK RVNLKNIDAL VLSACVQMPS LAAIQKVEDE CGIPVLSASV ATTHQMLKSL
241 GLHAEVKGCG ALLSGAYA
SEQDB ID: 3101377HBN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRLKTFQEL FRRDRRPGDL VFAYIFLGFC LFLLFNLRDQ AQWLDNAKTV AQPAFWPTVA
61 VVGMTLFAGL HLVGSLVSPR IPGRLKEGAF WIRSGEYVVY FLIYVWCVPI VGYLLSTIVF
121 AVFLTIRLGY RSKQALGFAA FFGFAVVLVF RAGLQVKIPP GQIYEHLPDA IRTFAMVYL
SEQDB ID: 3101377HBP
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEAILGGIQI LLSWQVLVAL LVGSVGGVII GAIPGVGAAV AIAILLPATF AFEPIVGLTI
61 LLGIYGSSMY GGSIPAILLN TPGTPVNALT TYDGYPMTKR GQAHRALSLA YSASFFGGIF
121 AIICLILLAP VLAWIAPNFG SREIFLAALL GIILVILAHR GQIMAAGMMA FFGIFLSTVG
181 LESAKYTHRF TFGQDWLTGG INLIVIVLGL FAVSQALMLL LEQEKEPESA RVEGSLWGGF
241 AELLGLKRVA SVASSLGVMM GTIPGVGEFT AQFLSYTYAQ KTSKTPEAFG DGSPEGLVAS
301 ECANNAVPAA AMIPLLALGV PGEALTAMML SVFYVHNVIP GPQLFQNELD FVMALYMAML
361 LLNVIVIIFL LSSTNLLLKI TQIPTRFLGM MILVLSFVGV YSMRNSAVDC AMAAGFGIFG
421 LILKRLNLPI VPIILGVVLG AIMEVKLRSA MARIEEPLDW FNRPISVILI LLILFVIGNH
481 YRALILEHRS RLQKAADGEP EDAAEGKVAP EGF
SEQDB ID: 3101377HBQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKKLFSALAL GASLMGTAAV AEYPEKPVEF VIPFPPGDLE DLLTRIIADE FQDTYGVPAA
61 VVNKPGGGGG PFPGAVSVAN APADGYTIGS FVIGVPVVGP TIGIPDLQPD PFEPIGIFLT
121 YPFVVAAKGD APYSTMEELA THAKDNSVLF GHFGERSIPR RHMIAVSRQL GFEFSSEAAF
181 DALDCNTLAS GDADVISTTA QLIFPCLDNL KILASATNER ISIMPDVPTM GEIAPELDLS
241 TWNGLFVHKD TPADVREKIE AVAIKALNSD AAKELAANTG AVIYWKSAQE AKAQIESDIK
301 VLKIIDDLVA GN
SEQDB ID: 3101377HBR
Reference:
3101377
Name: sulfatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTQNRNILWI MCDQLRFDYL SCYGHERLNT PNIDKLAKRG VRFTNAYVQA TVCGPSRMSA
61 YTGRYVRSHG STQNGIPLRV GEPTLGDHLR DVGMRNVLIG KTHMRPDLDG MKRLGIDPDS
121 EIGARVGEGG FDAFDRDDGV HPTGYRKKEP AYNDYLRHAG FQAENPWEFW ANSAEGKGGE
181 NQSGWLLTHA DKPARVPEEH SETAYMTRRA MEFMEAAEKD GRPWCAHLSY IKPHWPYIVP
241 APYHDMFGPD DVKPAVRSDE ELKAAHPLFK AMTEEVYSRN FARDEVREKV IPAYMGLIKQ
301 IDDQLGQLFA FMQERGLDEN TMIVFTADHG DYLGDHWMGE KYLFYEAAAK VPLIIYDPSD
361 KADATRGTVS DALVEMIDLA PTFVDYAGGV PPMHILEGKS LLPLLHDDDS SWDRQYVFSE
421 LDYSNLPARL KLGRDIQDCR ATMVFDGRYK LVEVMGFAPI LFDLEVDPDE LKDLGRDPSA
481 EEVRQRLTSA LDAWHRNTRQ RITKSDAAYR ALDPVLRESD PDLMAGVIIG YWDEDEVEAE
541 KRRIARILGE NS
SEQDB ID: 3101377HBT
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo9;megaplasmid
Sequence:
1 MSRPTPPTYK TRNWPAYNKA LKRRGSLTIW FDPAMTWDAA PTGKRGRQPD YSDAAVQTCL
61 TMKVLFGMAL RQTTEFVESL LGLIDLDWAV PDFSTLSRRQ KTLKVNIPYR GSDGPLHLLI
121 DSTGIKVEGE GEWNARKHGG TKRRVWRKIH IGIDEKSLEI RAAEFTTSEI GDAPMLPELL
181 DQIPPEQEIG SVTADGAFDT RKCHEAIAAR GAAAIIPPRK NAKPWKPDTA GAIARNEILR
241 TSKRVGRTIW RLWSGYHRRS RAETKMHCVK LLGQRLTARD FDRQVAEFQL RVAVLNGFTA
301 LGTPITDAMG
SEQDB ID: 3101377HBU
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRRQFRCLRP GQSAEMALGG MTKITWQSSE SFEVEEAGTH HVRRGGLGQG ADDPLTGLFA
61 QPEVRKVFEV VEAQRHVVRP TKRSAGPNEI AVRLDVDDGA DYILAVRHPS GAIQFIGGQE
121 IGAGGKRSNS ALRTRRTRNY AIEFRAPISF YAEKDVRRGI VGDIKDAVVD AIVIKVKDFI
181 AKKTVDLAEA AIWKLLGREP GMKQLSIENG RLNLAPVSGR IKPGPNGRAL LFIHGTFSTT
241 DGSFGDLASA EFFGELARTY GNAIYGFDHY SVSVTPEKNA SDILKTLPSG GIDCDVVTHS
301 RGGLVLRTLN ERQGDLSQGK RFRLQRAALV ACPNEGTQLA TPDRWQGTLG WLANLLDLFP
361 PNPITSNAAL VMHWVTWFAK VGVAAAEGLD AMNMTGAQIR QLQSPPSPAP GQYSALVSNC
421 EPNGKLWARA LDLGIDWFFD EANDLVVPTS GGWRIDRVPD FIPKDQIGAY GPGGNIPAGP
481 RQVTHISFFD RAETLQFVLR ALSGAPQHLP ELDLARALPV SRSADGAVLP AMAEEVEPQV
541 AELPAFETVL HRAEAAAPRK APARRLAAHP NSSVFELIVL DPEQITRMGF PRVEEEEAED
601 GHGTPFLYAA YGGARVMVPF YLKKAHLPPK TGNETEDKRL KSMAAEMGQR WGKLFGFHRR
661 VQSVLDGNPR ARELSPDELR IFGELLFETL LPQEVRRLYD VARSREHDKL FVIFTSMIHW
721 VFDMPWEFAR DPERGTYLAT EDVHFIRNVL TQTPVEKLSP RESLKILIAT SEPRDQRRVS
781 ATEEIAKLRK AITELQRDGL IEFEIRKNAT PRNLHHEIAT GNYDVVHFIG HGYWNTKSGE
841 SGLVLEDETG NSRPLGGRPL REILSGRGIR LVFLNACDTG RSRRASGVET TSLAGVAQDL
901 FGRGVPNVVA NQFPVGDNAA VAFARTIYEY LAHGKTIAQS VREARISANY EKDGQSMDWA
961 IPVAYARDPE DRLVVERKAA GGDGLG
SEQDB ID: 3101377HBV
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRFRVFAVLS FAVLVALAGT GVPQAQSVSE APYSISRFRL DDFSTPILHR NETASGSLEI
61 FFVVPQFQVP EGKERQFLTE MVDNYWRGLA VVPGSGTAPV GIVSSANSVV LSANNTTMES
121 IKTHSELVWN VESFGDVQVL GEEVAAQDGV SLSLFYQAVP VRVVHRSDTN ADPSSITRAS
181 NAISLQYRVF DNTKLGALIG GFAGLLAAWV YFYLRTIRRI RDRGRASLRL QELQTRLEKA
241 ELRAERLTDQ PERQSTSIPP LDVPRPPVPP ALLDALADKT AMVAFGSGAS AQAGLPTSHE
301 LILRLVDRFD TQISDRLRQN IQYATSANEE GVVEPDRFSA IVEALSDQVS RPALIEAVQD
361 IFADMRRNTG FYETLSRIGW SGALSLVWDD MADENFLAAN PPFLRLNPED TDEMRQAIKA
421 GEKLLLRGWG GLTEASGENI VLTFEEFRKL LEERPEFGRQ LTLLLQTRTF LFLGLSPISL
481 REYLTALNPY LEVTQGRHFA LVPASYENEL FVRPLEQYGI ELLEYDPAGD HAQVKNFIDD
541 LLQQARNLGQ YRQPEEDRAN PLAWQPLTRL ELENIGPFNT LEIDLPTGRI PNDTAEVHGE
601 PWTIITGENG MGKTVILRAI ALVLSASDPL VAARAGSLLK LGKQSGRVTL SVGTRKIEVR
661 LVRDRKVIVT SRQISPLAAG QFLVLGFPAL RGAPSGEPAG PRELDEQPPG PQDVYPLVLG
721 SVDDRMLNLK QWIVNVLSAA RGGDAKNRRL AETLDSIVSQ IMPGGVVGFA PLSEANVLKL
781 SIRTPGDGGV EREVPFEQLS QGMSAIFNWV GVLLQRLHDI SGEDEDPSKV AATVIVDEID
841 VHLHPEWQRR VVTLVKDIFP NVQVIASTHS ALIVSSVTAD EVRIFRRIDD GEFQLVRPTR
901 ETYGRSATDL MQGEALGVQN ARTVDFDEKV VEYLDLRKLA SRNPDQEDRY QDLRSELQDA
961 NWAGISEEPA PVVTAEDIQR LSQKYF
SEQDB ID: 3101377HBW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHRLDPNYTS EALKKLIEIG QEKAKELIDA FEEDPASVEV GTFYTKFKDD LIACQNGNCA
61 YCEQLVSGHP GDVEHYRPKN RVTLDSGKVL TIKHPKHGEM NHPGYFWRAY SWDNLFLSCG
121 DCNKARYHSD QDGRTKFGKQ DRFDILGKRA VDPCDDLNDE LPLLVHPVDG DPQKDLTLDG
181 ENLYQAHNDR GQYTIDLLGL NRRADLIERR SVALERGQLV VWEFLDAVKN EKAKKQMEKA
241 ELLQKIIDGS IEFLSAYRLG LFGELKKLDD LGVDLKIGEL VQKVLKTGGD PSADAPR
SEQDB ID: 3101377HBX
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSKRTTLITG GNSGIGAAIG QALLERGEAV VSLGLEMPED RHNDLHGYTA DLTDADATAE
61 VALRICKDHQ IDALVHNAGL ILPNLLEDAD PADVLTLAQL HLAAPMALTQ AALPGMVERG
121 AGRVVFISSR SLQGMPTRSA YSATKAGING LARTWALELA PKGITVNVIA PGPVLTDNFW
181 AIVPKDGEQQ QKIANGIPVR RIGTSDDIAN AALFFLDDKA GFVTGQVLFV CGGTSLAGLS
241 G
SEQDB ID: 3101377HBY
Reference:
3101377
Name: cyclase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTQTPLAALS QALITGGVEC IDLTNTLSPD FPVIVLPAEF GQCAPFRMEK VSRYDDNGPA
61 WYWNNISMNE HTGTHFDAPA HWVTGKDLPS NTVDAVPVQD FVAPAVVIDI SDEAAADEDF
121 VVTRAFLEDW EARHGKIPDR HWIALRTDWY KRVGTPDYLN LKEDGAHSPG PDGGAMDFLV
181 HQRNCIGLAV ETVGTDAGQA FHFDPPLPAH SILHGNGRYG LQCLTNLDKL PTFGALIVAC
241 PLKIEGGSGS PLRVIALVER AQA
SEQDB ID: 3101377HC
Reference:
3101377
Name: flagellar basal-body rod protein, Isotype: FlgB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgB
Sequence:
1 MKLIEGEAPM FSDLNVFKMA YAMATHAGTR QAVIAQNMAN ADTPGYRERD IAPFAETFAR
61 ETAGTAMQAS RTSHLNGTAA SAASWAPFET NAAGDPNRNN VSIEEQMLKA VEVKRQHDRA
121 LAIYKSSMNM LRVGLGRG
SEQDB ID: 3101377HCA
Reference:
3101377
Name: oxidoreductase, Subunit: short chain
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDPLQRPRR KDPLRRTTLG HVPPRLRSRA AMEMATHAAQ GRFVLQTCES CDRATYPPRD
61 RCPNCWGELV WREQDAGGQV AAETTIRHST DTYFRNHMPW RIGTVRLDAG PTAIVHLHGE
121 AGVGDRVNMV LKLDRGGNPA LFAMPRGDVP NMQDDPQFRS FTADPKHRRV LVTDGRTDTG
181 QAIARALLDA GAAKVFVGDC APLMRFAGKQ QLAALDGAEL VPLDVTDTHS VGNLAAQLGG
241 RIDIVINTAG QVREGGVAFG AKLSDLQAGL DTGVVGLMRL AQAFGPALGA RSDDGVNSAA
301 AFLDVVPVSG LSGQSGYSGT AASAAARLSL LSGFRGEMQK AGIRVMSVLT GPVDDAWHQR
361 LPQPKTAPSH LARTVVAALR DGQEISCAGD VAKDLFARWR ADPLLTMREE NR
SEQDB ID: 3101377HCB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGMQARYDGV AVCAPITVPY VRFSPESAHW WTGAALRALG QKTGLNAGDI DGFCFASFSS
61 APDTVVGMVQ HLGLSPRWMD HIPTGGASGI MALRRAARAV QCGDAEVVAC VAADTNQIDS
121 YRQTLAGFSR FSQDATYPYG FGGPNATFAL ITDNFMRQFG TTRETFGKLC VAQRENALSN
181 PLALMKKPLT IEHYMNARPI SDPVHLFDCV MPCAGAEAFL VTTPDKAEQL GLSTARILST
241 IERHNAFADD TVQFRGGWER DQEALWDRAG CGPGDVQCVQ VYDDYPVIVA MQLADLGFCS
301 KPGLNDFIAA NEFTISGSLP LNTNGGQLSA GQAGAAGGFQ NVTEGLRQIL QCPLGEQVSD
361 AHRALVSGFG LVNYDRGTCT GAAVLQREAL R
SEQDB ID: 3101377HCC
Reference:
3101377
Name: AMP-binding enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRRMNKTVFG RFTETAHRRG DAPFLHVLEE TAVIYGIPAG DISYGEMGAR IADWADRLSL
61 AGFGHGHRVG LLLQNRPVFL EIWLALNSLG ASVVPINPDL RLAELEYMVA HSEMALAIVL
121 PERHQEMSEA VANAGSEALV ITSDTDIPPA PAPSTPTVDL GPETECALLY TSGTTGRPKG
181 CILTNEYFLH SGDWYAETGG YISLRRDAER MLTPLPLFHM NAMAVSVMAM ITTGGCLTML
241 DRFHPRSWWE AVRKSGATVV HYLGVMPPML MGAEPSEADR DHDVRFGFGA GVDPKLHAAF
301 EERYGFPLIE AWACTETGSG GVISAHEEPR KVGTSCFGRP CDNVAVRVVD DSGQDVAPGQ
361 PGELLVRRAG DNPRYGFCAG YLKNPEATEE LWKGGWLNTG DVVLQDEDGS LHFVDRKKNV
421 IRRSGENIAA VEVESILNRH PDIRISAAAA YSDDLRGDEV AVFLILENGG GDEAKAVEIV
481 TWALGQMAYY KVPGWIAFVE DLPLTATQKI LRGKLKSLLE DTAARSGFID TRHLKKRQQ
SEQDB ID: 3101377HCD
Reference:
3101377
Name: aromatic 1,2-dioxygenase, Subunit: beta
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTPETLIDFV YDEAATLDEM RWEDWLALFH EDGRYWMPLE WQQQDPILQP SLMYEDQLLL
61 TVRVERLSGE RTFSQKPKSR CHHLLQRPRV LSLGEGDGIF RLRTSFIYTE TRGDNLERYS
121 GWVSHKLVEV DGALKIKLKR VDLINFDAPF GNLQLFI
SEQDB ID: 3101377HCE
Reference:
3101377
Name: aromatic 1,2-dioxygenase, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDRYRGNAEA VKNLVRGHAV HRDVYVDKEV FDLEMEQLFP NSWVYVGHES QLKDPGDYIT
61 SKIGHQPILI SRHKNGTIHV LHNRCPHKGV KIASEPCGNT GKFFRCPYHA WSFKTDGSLL
121 AIPLKKGYEG TGFDNDRAKD GLPRVENVHI YRGFIFARLS DTGLSFEDYF GDSLSTIDNM
181 VDRSPKGEVE IIAAPIRYMH TCNWKMLVDN QTDTCHPMVA HESSAGTAVS VWEREKHRFT
241 ETPMAVQLYA PFMSPYEFYE SAGIRVWPNG HGHSGVSGSI HQDYDDVDGY LEMMVEAYGE
301 TRAREILGDI RHNTLYFPNV MVKGPVGILR NFIPVAVDRT LVESWAFRLV GAPDKIYERA
361 LMYNRFINAP TSIVGHDDLE MYERAQEGLL SDANEWINLR RLYEEGEPED VTEVVNGTSE
421 RQMRNTFYAW RKFMVQGMEQ KQEVSA
SEQDB ID: 3101377HCF
Reference:
3101377
Name: oxidoreductase FAD-binding domain/oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPSVAAEVIA VSSETRDIKR FILKPQDQGL CTWEAGAHLR VVVSDGSTRA YSLLRLPDLS
61 DDQIALGVLL EAKSAGGSKF MHALKPGDMV KVSDAANQFP LGGHEEHAVL IAGGIGVTPI
121 LSMASDLVAA DRSFEMHYAG RTEGALSFVP ELKAICGDAL HIHYDDQPSA MNIQAILENT
181 PTGSHVYFCG PSGMIEAVKR TAKELGWSDE RIHFELFATA ADESQNTAFD IEVSDTGQII
241 HVPADKSIIE ALEEAGLDPL YDCQRGDCGI CQCDVIEGIP DHRDVILSDA EKASNTVMQI
301 CVSRSKTPKL VLDL
SEQDB ID: 3101377HCG
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo7;megaplasmid
Sequence:
1 METLERQRGL RPDHGGPGHR KRRAQDDHDR RDLSQGTPHC VEPVREKGGR GRQIGRTKGG
61 MNTKLHAVAD AKGRPIGFFM SAGQVSDYTG AAALLGSLPK AGWLLADRGY DADWFREALK
121 DKGIKVCIPG RKSRKKAVKY DKRRYKRRNR IEIMFGRLKD WRRVATRYDR CAETFFSAIM
181 LAATVLFWL
SEQDB ID: 3101377HCH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAEQKNPSKS KSAPADREDR LKAALKANLA RRKAQAKART AQDGADHNKK G
SEQDB ID: 3101377HCJ
Reference:
3101377
Name: UDP-GlcNAc 1-carboxyvinyltransferase, Class: EC2.5.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: murA, Linkage: megaplasmid
Sequence:
1 MDSILVTGNG PLNGQIPIAG AKNACLTLMP ATLLSDEPLT LTNAPRLSDI KTMTLLLQSL
61 GAEVSSLQDG KVLAMSSHDL TSHTADYDIV RKMRASNLVL GPMLARLGQA VVSLPGGCAI
121 GARPMDLHIE ALEALGAEIE LRDGYLHAKA PGGLKGAVHE MRFASVGATE NMVMAATLAK
181 GTTVLKNAAR EPEIVDLVRC LRAMGAQIEG EGTSTIEIQG VDRLHGATHQ VVTDRIELGT
241 YMLAPAICGG EVELLGGRLD LVGAFVEKLD AAGIDVAETD KGLKVSRRNG RVSAVNVTTE
301 PFPGFPTDLQ AQMMALLCTA EGTSVLEEKI FENRFMHAPE LTRMGARIEV HGGTATVRGV
361 ERLKGAPVMA TDLRASVSLI LAGLAAEGET LVSRVYHLDR GYEHVVQKLE AVGARIERIK
421 G
SEQDB ID: 3101377HCK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDATFKDGR EAPLNLGAED GDDLKIISTL VQDAVFPITE MSWRPGTRRF ALLLNRFRWE
61 DRTAAEQRGR GYERVQSLLV IDSVLGVASQ GIDRSDTDTV LSLLSVTFEP ETDGAGQILL
121 TLAGDGAIRL TVEALDVTLK DVTRPYLAPS RQAPHHSD
SEQDB ID: 3101377HCL
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRRATLFDLF DMSRVLTRSI SQLCTADHGG DAEAIARWCA NKTPQALRAQ MMDEGAEFWL
61 LTRAGQIAAV GALAEIDQTA GTGRVTLNYV DPACRGQGAS AALLAGLEAR LSEQGIERGL
121 LTSTATARDF YLSRGWRPDG PPRRGRWILG HPMAKTLAP
SEQDB ID: 3101377HCM
Reference:
3101377
Name: glucosamine-fructose 6-phosphate aminotransferase, Class: EC2.6.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glmS, Linkage: megaplasmid
Sequence:
1 MCGVVGVAGV GDAQKEILGM LTNLEYRGYD SSGMAVLSNG RLHVVKRQGA LSELKKELAK
61 PSVPLHGSSG IGHTRWATHG APSDINAHPH LSSDGKVAIV HNGIIENYKP IKEQLLDDGY
121 VFQSETDSEV IANLAAKLYQ ECGAGSYRQV LSRLQSRLVG AYAVVIQFAD APDLIGGIRN
181 ECPLNYIQND GQSAISSDLS SLVSYGRDVF CLKDKQCVIL GNEGVEVFDE SGAESEAIAI
241 TINWSVEKAR KDGYDTFLQK EIHEEPAAAQ AFCREIRNHR AALDAYLKQH SFTKIVVVAC
301 GSASFSAIFA EALARQFELP VDVISEVGSE MRYNPPIISS TTLVLAISQS GETADTIGAV
361 KAAKQKGAQV VAFVNVAGST LEFVSDLVLP LSAGPEISVP STKTVTNMFL AVYFFLDAMR
421 QALSGARDES WFTSAEDFRA ALAEMVGRER EFRSIADRIS GYQSCFAIGR GVDFSIAKET
481 ALKFKETSYL HCEAMNAGEF KHGSISLIEY GMPVLCILTD QAQRKKMVSN INEVRARGAQ
541 CIVISDLQPT EIEDAEAMTV ITVPAVGPVW NTILTLVVAH YISFLIGTLR GIDVDRPRNL
601 AKSVTVE
SEQDB ID: 3101377HCN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHITKFAEGG QFEPRKIAAA LRTSAEEVAM TVGLGKDALQ RRARINSDKT QRRLRELVEV
61 LNKVEPRFGS ELMAYAWYRS EPLPGFDGRT AMQLVQEGKV QQVLDYVDAV DAGVFA
SEQDB ID: 3101377HCP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPLRHGRYRG PLYRALNPVY AREPLSGRGA ERYGGRFNAR GIPALYTALD PASALREANQ
61 VGSLQPTILV SYRADLGPVF DSRDTGELEQ RGVSARMLAD PGWRQAMLDG REVPTQDFAR
121 GLVADGYVGL LVQSHAKGAS DSDLNIVLWR WAGDGCTLGV IDEENRLGRM
SEQDB ID: 3101377HCQ
Reference:
3101377
Name: transcriptional regulator, Isotype: IclR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MATEKRKRGR PKSFADKSEQ NTNQSLDRAI DILECLASAR GLALSEVAER LDLAPATVYR
61 ALHTFESRRL TEIDPETQTW HIGPDLFRLG SAFLLRSSLV ERARPVLRKL MEVTGETANI
121 GIERDGEILF LSQVETQSNI RAFFQPGTRA PLHASGIGKA LLSQYDRARI DRLLPEMRLE
181 QFTMKTRFDK EQLLSELDLI HRRGWALDDE ERTHGMRCVA APITDFTGEA IGGISVSGPS
241 DRMPDARLTE IGNIVRDAAL DLSRRLGAPL SVSIRPSTDE A
SEQDB ID: 3101377HCR
Reference:
3101377
Name: Ser-glyoxylate transaminase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSFQNPVFIP GPTNIPESLR KACDMPTIDH RSPLFGQILH PARAGVRAVL KSETAEIFIF
61 PSTGTGGWET ALTNTLSAGD GVLAARNGMF SHRWIDMCQR HGLAVEVVET PWGEGLPADR
121 YEEILAADTH HRIKAVLATH NETATGVRSD IAAVRRALDK AGHPALLFVD GVSSIGSMDF
181 RFDEWRVDVA VTGSQKGFML PAGLAIVGFS AKAMEATATG TLPRTFFDVH DMARGYANNA
241 YPYTPAVGLM NGLNQACRML LDEGLENVFA RHHRIAEGVR AAVHAWGLEL CAASPDLYSD
301 TVSAIRTPEG FNATDIVTHA ASKYGVAFGV GLGEVAGKVF RIGHLGSLTD VMTLSGIATA
361 EMCMADLGLD IGLGSGVAAA QEYFRSHSAT SLLAAA
SEQDB ID: 3101377HCT
Reference:
3101377
Name: pyridoxal phosphate-dependent enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYIPTFEDML AAHARIEPHI RRTPVRVSDY LNELTGAQLF FKCENFQEPG AFKIRGATNA
61 VFGLDDAQAA KGVATHSSGN HASCLSYAAM LRGIPCNVVM PSTAPQAKKD TVRRYGGVIT
121 ECAPSTSARE ETFARVQAQT GGDFVHPYND PRVIAGQGTC ARELMEQTDG LDIVVAPIGG
181 GGMISGTCLT LSTLAPETRV IAAEPEQADD AYRSFKAGHI IADDAPKTIA DGLLVPLKDL
241 TWHFVSNHVA EIYTASEQEI IEAMKLTWKH LRVVMEPSSA VPLATILKNR KAFAGKRVGV
301 IITGGNVDLD KLPWMNG
SEQDB ID: 3101377HCU
Reference:
3101377
Name: Thr aldolase, Isotype: low-specificity, Class: EC4.1.2.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKDMTNLDNF EVGFDIPAKP GMDAAEIQTP CLVLDLDALE RNVKKMGDYA KAHGMRHRVH
61 GKMHKSVDVA KLQERLGGAV GVCCQKVSEA EVFVRGGIKD VLVSNQVRDP LKIDRLAQLP
121 KLGSRIIVCV DDLANVADLS AAALRHGTEL EVLIEIDCGA GRCGVGTTQD VVAIARAVDA
181 AENLKFTGIQ AYQGAMQHLD KYEDRKAKLD IAIEMVESAV QGLKAVGLDP ELVSGGGTGS
241 YYFEANSGVY NELQCGSYAF MDADYGRILD QNGQRIDKGE WENAMFILTQ VMSHAKADKA
301 IVDAGLKAQS VDSGLPFVHG RDDVEYIKCS DEHGVVADPN GVLKVGDKLR LVPGHCDPTA
361 NVHDWYVGVR GGKVECVWPV SARGKAY
SEQDB ID: 3101377HCV
Reference:
3101377
Name: Orn cyclodeaminase/mu-crystallin family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAAGTARNFP VIREAIGHAD ALYGFKSGFD RQALNLGLKS GGYWPGNADK GLTNHQSTVF
61 LFDADTGRCQ AVVGGNLLTA LRTAAASSVS IKHLARQDAK VIGMIGAGHQ AKFQLRAALE
121 QRNFEKVIGW NLHPEMLVNL QEVADEAGLP FEAVELDGMR EADVIITITS SFDAILKADQ
181 VSPGTHIACM GTDTKGKQEV DPQLLVMADV FTDEVAQSIS IGEAQHAVAH GLIQAADVAQ
241 IGAVINGTNP GRTSDAQITL FDGTGVGLQD LAVAATVVER ARAAGAGTEI AF
SEQDB ID: 3101377HCW
Reference:
3101377
Name: membrane protein, Isotype: major facilitator transporter family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRDHVSRAIL ASALFAATYA VNLQAPLYAV YAGNSGVGAA AVTVAFAAYV AGLMPTLILL
61 GGLSDRIGRR LPIALALCLG AAGTALLAVV PTWPSLVLAR LLLGVSTGLA TTAGTAYMAE
121 LFGADRTRQA TLLVTSATSL GFGGGALATG LCLSLGGPSV MPASFVALFV AAPLLALAVL
181 GLPRADTPHP VALLRLPVFP AGSWQFGAAL ALAWSATGMT IAVVPLQLAA QGLGAYTGMV
241 IFLAIFVGFL SQPLARRLGN RVALSVGFVL VPTGFVTLLL GVWTQSIGLV LAGTAITSAA
301 SYGFTYLASL AEFALRAPDN RARAAAGLFV YAYVGFSLPT IGSGALADRF GLLPAMTVFA
361 ALLVTLTWAV AWRGAKVAEL RQPAQ
SEQDB ID: 3101377HCX
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKYSKLVETL AARIKAGEIR PGTRLKTHRA FAEEHGVALA TATRVYNTLK QRGLIVGEGG
61 RGMFVRQPEV PPTLGIEQPE EAPGIDLVFN MPGDPGDGEV LRAGLRGLAG RGDLNALLRY
121 QPHGGVLAER RVIANYLSPR LGKIEPERLF ITSGAQHGLS VVAFGLLKRG DGIATDPLTY
181 PGFRAVVGLR DLELHPVPGQ LGSMDPLALL RVCAKTRLRA LYLMPSVHNP LGTVMDEYSR
241 RAIVAIARHH DLLIFEDGAY DFLETDPPPS FLELAPERTV YIGGVSKVLA TGLRLGYVVV
301 PPDLAGALSM AIRATTWNTP ALITALVTQW IEDGTIGHFE QTRRAAGARA QAICRACLGH
361 HDFSAHRNAG FAWVPLPGRL RAEEVVARLA NRGIAVSTAK PYAVGPTTPN ALRLAFGGLN
421 DALLRSSLTT ISTVLDMA
SEQDB ID: 3101377HCY
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNRATLSMQN THAPVTPCGW LVAALLEAGV PLAEIEAWLG QRLPPDHRDR TVLPSEQYFR
61 LFEWGAGVTA NPDLGIQIAA HLTSRDFGLL GYLLENSDSL GTWLHHLTTY NAVFSQDAEI
121 SVMRAQGSVV VGYSPVPVAG FTPLQDIWSS IGMIVHAIRV ATRCDWYPAR CRFSTPCPAD
181 TSALEALLGP ELHFDHKTNQ IELPVRDLDL AIPGADPVLL EILKRQADGI VATLRQQEEI
241 VSRLRLMITA HLAEGGFDTV RAARALNMSV RKLHRTLAER GTSFRNLRNE VLGETARAHL
301 ADPGIQITEI AHRLGFSETS AFTRAFKALE GMTPRDFRAR SLGKT
SEQDB ID: 3101377HD
Reference:
3101377
Name: H-transporting 2-sector ATPase, Isotype: flagellum-specific, Class: EC3.6.3.14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliI
Sequence:
1 MTAPDPLALK AEFDSLSLVR HVGRVTGVAG GVIQIQGLAR QAQIGDRVEL KRNFGPSLGG
61 EVLQVEGSTI NMLPDSAPEG VSLGNRVVLH PIPGFAPGRH WLGRVVDPFG RPLDGRPLMR
121 GSKARDLMRA PPPAVQRKPL GQRMATGLAA LNTLLPIVRG QRVGLFAGSG VGKSSLLATL
181 AKSMQADAVV VALIGERGRE VNEFVAKALG PEGLARSVIV AATSDQSALV RRRCAWAAMT
241 VAESLRDEGL NVLYLADSIT RFAEAHREIS AAMGEAPALR GYPPSVTPLI TGLCERAGPG
301 TEKQGDITGV FSVLVAGSDM DEPVADILRG VLDGHIVLNR EIAERGRFPA IDISRSVSRS
361 LPDAATPEQN ALIGEARRLI GAYEQSEVMI KAGLYSEGAD PLLDQAVRVW PELDAFLARL
421 DPQGIEHSFS RLQLVLRRSK SGPRH
SEQDB ID: 3101377HDA
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIFRAFSVLV LPVALLAASA ADADGAALYA ESCAGCHGET GQGNGELRAP ALAALDAGYL
61 IRQVGHFRSG VRQVNPDNDM AVAMVELLPD VSEADTAEIA SYLASLPLPV LEDDNDPPGF
121 RSRGLYSGCI SCHGARAQGI EALNAPRLAR QYGWYLAEQL DAFRVGRRGA HPEDDPGRQM
181 KAMADAIGSE ADIAALVSYI ATLDP
SEQDB ID: 3101377HDB
Reference:
3101377
Name: di-heme cytochrome c peroxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MADEITLAET CPPSFQLLAD GTCELVTLYQ FYDSPPQHGG LRARLDPPAN RYTPQQIDLG
61 RYLFFDPILS SGGDLSCASC HDPAQGLSDG RKRGLGVTEL NRSTPSLWNV GFASSLMWDG
121 RAETLEQQAL LPLFNPAEMA ANADGIETAL NAAPGYVSLF QTAFGKSPSL ETTAIALAAF
181 QSSLISLNSR YDRYAHGDAT ALNPQEIRGM NAFRGFVARC SQCHIPPLFT DFELAVVGAP
241 ADERGFADPG AGALAADPAR LGAFKTPTLR NITRTAPYFH AGQFDTLKGV VDFYNNTAGH
301 AAPEGQDLRI HWHVHMTDGP KLSAGTVADI VAFLGALEDE SLMPRRPDTL PSGLLPQD
SEQDB ID: 3101377HDC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTGYGKTFAL LGTCATLLGP PLSAQTGSVL SDLQNEEVQA RYRAAAAERI ACPRIEGDAA
61 LMAAFAKDAA SKWDRAAMGC ATEYGARAME ALSLPTNLIW AVATFRTDNI ETHLQVLGAH
121 LDYFEVLDKS YSAHYQGIEM ATELGLRWEQ ARERSETLMT RIDPLVPKLT EARLLRAAYL
181 LASTLRETPP EVQNTAVAAA LEDLQIAIAE NPEALDGLGP LLLGQVLAVL PEFLGGDILA
241 AIDLLEQAHA LNPTDLSVHH TLVEAYLGER ETDKALALLR HAASIDPSTE NPQDYADEMK
301 YLGGLALRAG APDLARQMAG HRSAILAAHP QLDPRKEMAA LGHGGADPLT GKKPDDLN
SEQDB ID: 3101377HDD
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKNTGILRGA VIASLLGSTA MAAELTVPSG GDIQAIVDLA APGDTILVEP GAYHQSVYVD
61 KPHITLRGLR KGDAWALLDG EMKLNDGIIA SGHSIVIDGF KVTGYKGNGI MTQGANNFEI
121 SNNYVEGAFY GIFPQFGRNG LVVGNTVTGA EDAGIYVGMS DNVDVIDNVA FGNVMGIEFE
181 NTRNALMAGN HVYDNAAGIT LTLVPGLPVK DAHSQVIRDN RIIGNNHENF APASSIAAGV
241 PSGTGILVVG PDNITIVDNE IADNDNVGVF VADLITFGMD SDPKLDPYSD GVRVLGNTWR
301 NNGENMNGML ADMLTATGRT GIEVLAMGKG RDSCVLPADG VDTLGTNRWQ DCADENSAAL
361 VTARIEGGAD EPVYTREQKG RLTYLAVCTG CHAYDSVLHG PSVQSIQALY DGDPSGMVNY
421 ISNPVRKRDG FPEMPPQTYL GEETLDAIAR YILEELGQ
SEQDB ID: 3101377HDE
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTIETVLSHT TFTGYTAAQR TILENALRDM YANSATGKIL LDKVTAALPL DIKFVAGEAQ
61 AFRGTGRVEL DFAAVANLAY FDANGKGVAV EIEHVLRHEL VHALQGIGDS PRGTTSTDSA
121 KGPTLVFEKA INDEMSKSNR LSYEGVDSDT AIIPGTDYTG GAAIDLALAR SGNEDTSGNN
181 PATNDLLWGR GNGSNYFKSG NGTDYLYGNG GNDVLEGGGG NDSVNGGTGT DRAVFSGNCS
241 DYTITSNANG TITIADNRAN SPDGTDTLKD VEYARFADGE MNLTTGEFAC PGQNVVIVID
301 KTGSMSNDIA AAKAAAIEIA NALFGTTEKP VASTLAIVTY WDSNTVTNLS FTKHDSVADR
361 KAAALAALNN LSTSTSGMTE NLNTALLHAI NGNAGTWDTR NKSNKIIVFT DEDADDPHLR
421 AEVVSKALAA DIAVPPPPVG NAVPLQSAIE QVQGTNFVDY TDTPFSDPYG AAPLQILPVV
481 IGNSSTANSD LESLADQTNG QVFNASTSDP SQAAQNVIAA INASSGTDGD DSLTGDDNPN
541 SIGGLAGNDT ISGAGGNDTL SGGPGDDVLN GGAGDDSLRG NAGYDTVDGG ADTDTVVVNA
601 NSTDVNIIGS SDPITIQSPD GDVVISNVEF VRFLDRTMAV STLATLTTVN TFGGRGDDSM
661 DGDANGNRLW GREGNDTVNG NGGNDTLNGG LGNDAVNGGE GADQLSGGGG NDTLDGGDGT
721 DTAVFDLTSA SASVDGPDDA LRVDTGQGIV TLRNIEFVRF TDRTFNLTDL QALRDQTLIG
781 TPGNDTLRGS YGNDTILGLD GDDELDGGLD NDVLNSGEGQ DTLLGGPGDD LLRVTQTIAP
841 TVVDNTVSNP VSNPMTLPEN WSLDAFGDVA DPTTVPHQTL AITGSDETQE AFRFTATAGQ
901 IWTFDIDGAD FDTVLALYDN NGTQITSNDD SSTSNGAGGS TSGRDSFIQH TFAADGTYII
961 ALQRYGGGTI SSTQMATLNI SATGVTVPPV TTTDANLLDG GADNDTLEGG GGDDTLIGGL
1021 GDDSMTGGAG SDTAILATSQ QFVSGQNVTG GVQLTSSQGV DFLGSDIEFV QFNDGTLTLA
1081 QAAALAGTVP SAINGTNAGE AVDGTTATEI INGLEGADWI SPGGGSDTVD GGPGNDMLSF
1141 FNLPDTPGRT NLDYRLTIDM GAGTAVSHDG AERIQFANIE RLTGTIFADH ITGSSSDDYI
1201 RGLGDYDWIV ATEGADTIDG GNGQDMISFL EWQNTDPNTI SDAFTPNGAP PTGAQATGVL
1261 VNLANPTQNT NLASGLTLVS VERVTGSARQ DVFYGDDGQN DFRGLGDFDW FVSSDGGRER
1321 YYGGDGVDTV TYFNAPGAVT ANLRNGAVVN GNESGYGTQG WAARDLYFEI ENLVGSNFGD
1381 HLTGSADRNQ LSGLDGDDFL FGFGNIDYLK GGAGNDTIDG GGSSDYALFD GDLVDYTLTR
1441 TAENRVTVVG PDGNDSLIDV EYFRFDDQDV RIWDLPLV
SEQDB ID: 3101377HDF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAGEAKGMIG PRLLSGLVLV LGFLGTELVA KGECNEDGGW KMTVSAASGD ILNSVSNQRE
61 ADENTLALAG QHRDLLEAAL TAAGQRGASA DIFVVTAPAF TDATAGPVSW PPAGAQLASP
121 WLTMSRTGTG RLTLTLFVSD LRVIADGALQ ARGAAPADYR TGPGWRSMTF SCLAQAAESY
181 VSHVSASQPP ESWVAGQECV PPTFAGPMAW LFRSAPQNFF APFDMTVMKR IEAARGSSTA
241 FYEALYRALI RHGVALLASE AGSGDAWWHD ALREVTE
SEQDB ID: 3101377HDG
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVSALKSRWD THFGGILLVC VVAAAATFLS EHYGAPAMLF ALLIGMAFHF LHRDAAFAPG
61 LDFSAKTLLR FGVGLLGLRL SIGDVESIGY GAVGAVGGFV LATLACGAML SYLFGRRMAF
121 GLLAGGSVAI CGASAALAIA SVLPARADRE QDTLFVVIGV TALSTIAMIA YPILFASLGM
181 SDLQSGFLIG ATIHDVAQVV GAGYSISDEA GVIATFVKMV RVALLPVVML VVMFSFRGAQ
241 SQRVTLPWFL VMFIVLAVLA NAGVVPQVVI DAIGTLSRWC LVIAISALGV KTSLATIAHV
301 KPSYGVILVV ETLFLLAIAI GFVLLGGV
SEQDB ID: 3101377HDH
Reference:
3101377
Name: ACC deaminase/D-Cys desulfhydrase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHLARYPRRF IAHLPTPLER LDRLTAELGG PEIWIKRDDC TGLSTGGNKT RKLEFLMAEA
61 ELQGADMVMT QGATQSNHAR QTAAFAAKLG MDCHILLEDR TGSNNANYNN NGNVLLDHLH
121 GATTEKRPGS GLDMNAEMEK VAEKFRADGR KVYTIPGGGS NPTGALGYVN CAFEMLNQFN
181 ERGLKVDHIV HATGSAGTQA GLITGLQAMN AQIPLLGIGV RAPKPKQEEN VYNLACATAE
241 KLGCPGVVAR EDVVANTDYV GEGYGIPTES GLEAIRMFAE LEAILLDPVY SAKGAAGFID
301 LIRKGHFKKG ERVVFLHTGG AVALFGYDNA FDYSGRWVA
SEQDB ID: 3101377HDJ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQLDWIDDIL AVIDTGSLAA AAERRLLTQP AFTRRVRGIE ERIGAALFDR SRKPVAVLPG
61 VLALEPDLRE LSGRLRRLQQ DLRVSAEDAR RGVTLVCQHA ITTTISPRIV RDLTASQDIS
121 VRVRSGNRDE CLMLLLSGEA DFAVAYEVPG ERDPMLPQAF DRAELETDLL VPVHAPGLEA
181 AGARTAMPVI GYPPDVFLGQ VFDRFVAPRL PAGFTYEVRA ETALTLAACE YALGGIGVAW
241 LPLTLVAPHL AAGRLCRADG LPEQPLTVTL MRLSGASARR GDRSWLMLCG QPGVSSGPKD
SEQDB ID: 3101377HDK
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MESSFVLLFM FTSLVAFMLS GAGLAFVLGA IAFISTILLW GPAALIVAVL NTFETMTSEA
61 LMAIPLYVLM ASILQKSAII DALYDAMETW FSRLNGGLAV GTIAICTILA AMTGVVGAAV
121 AAMGILALPS MLSRGYHPPL ALGAICAGGT LGILIPPSVV TIVYAITAQI SIGQMFAAGI
181 VPGLMLAGSY MAYVLVRTWF NPALAPKPVH LKPIPLAVKL GKLKSLILPA LVVIGVLGSI
241 YAGIATPTEA AAVGVLGAML SALVTGKLRL SVLSDAATDT LRVTAMILWI TIGARAFISV
301 FVATGGADSI LTFVETLEAS RWVVLGAMVL ILIFLGLFLD EIGIILLCVP VFLPIVDTLG
361 FDPLWFGVLF MITAQMAYIT PPFGYTLFYL KGVLPEGIGI GQVYRGVIPF FLIQVAILIL
421 FALFPALVTW LPELLTQNAR
SEQDB ID: 3101377HDL
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTSLARRITA LNHNLFMCAR WLVFIIALMM LWEVLSRYFL EHPTSWAPEF ATLIFGPFFL
61 LGGPYLLHLG GHVAVDVLSA RAQGRLATGL RLAGLVLAAA FGIILLWFSL PLVLQSYQYG
121 ETSYSAWNPV LWPAKAFLPL SALLLVLQAI ADAIDIFAEE IHA
SEQDB ID: 3101377HDM
Reference:
3101377
Name: TRAP dicarboxylate family transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTNLNRRNAL QLGAVALAAP AILTGGAARA QGVTQWRMQA LWGGGTTPML YEEKFCARVL
61 ELTGGTLEIT PFSGGQIVPP AQAFDAVRGG AFQMMKTFDG YTAGKIPAHG FSSTVPFGFP
121 EPDQYEAWFY ERGGLDLARE SYAAAGLTYV APTVYGEEPI HSKVEIREIA DLKGLKGRFV
181 GLASAVMADF GVAVSPLPTS EVYSALDKGL IDVADRGDIK ANYEEGIHEV AKYLILPGVH
241 QPTTATSYIA NTGAYEALDN QQKAALAVAA REVSGALRQD ILVSNGEYLR KFADAGVEII
301 DFDPADVVQG RERAVESWAK AATDDLSKRM MESQMALMQE LRLL
SEQDB ID: 3101377HDN
Reference:
3101377
Name: hydroxymethylglutaryl-CoA reductase, Class: EC1.1.1.88
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mvaA, Linkage: megaplasmid
Sequence:
1 MTGKTGHIDG LNSRIEKMRD LDPAQRLVRV AEAAGLEPEA ISALAGNGAL PLSLANGMIE
61 NVIGKFELPL GVATNFTVNG RDYLIPMAVE EPSVVAAASY MARIARENGG FTAHGTAPLM
121 RAQIQVVGLG DPEGARQRLL AHKAAFMEAA DAVDPVLVGL GGGCRDIEVH VFRDTPVGAM
181 VVLHLIVDVR DAMGANTVNT MAERLAPEVE RIAGGTVRLR ILSNLADLRL VRARVELAPE
241 TLTTQGYDGA DVARGMVEAC ALAIVDPYRA ATHNKGIMNG IDPVVVATGN DWRAIEAGAH
301 AYAARTGHYT SLTRWELAND GRLVGTIELP LALGLVGGAT KTHPTARAAL ALMQVETATE
361 LAQVTAAVGL AQNMAAIRAL ATEGIQRGHM TLHARNIAIM AGATGADIDR VTRVIVEAGD
421 VSVARAKQVL ENT
SEQDB ID: 3101377HDP
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKKIDRVIES IQSRITEGRL KPGQKLPSIR QAVDEFGVSK NTVIEAYERL SARGLIRSVH
61 GAGFFVCAST PAPLSKATQP AHIVEAVDRL TLLTAQLDQE KLPVRVGDGR PPQSWMNDAL
121 PLRMKGNIFK NFVGDPSGYG GVSGHLQLRE LIAARSNRAD MSVHPDQIVT TFGANHALDL
181 IIRRYLEPGD VVLVDDPGYY PLLGKFKLAK IRAIGVPRTP TGPDLDVMET LAAAHGPKMF
241 FTQSTCQNPT GSSMSLPVAH GVLQVAQRFG LMVIDNDPFT DLPGNAGVPL SALDAFNSVI
301 AISSFSKLLS ASFRVGYVIA RPEVARELTE LKLLTVVNSS RFSEMVIAEL IKSQRYGRHL
361 NKLVNRLEEA RRDYHRKVRK LGLDVFCAQE TGYYSFLQLP HTVDEGQLVR KASAAGIMLA
421 PGRLFAVDEN PARPALRINV TRADDPRFYR FLKRQVIDGQ V
SEQDB ID: 3101377HDQ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNLQQLAVFR EVMETGSVSA AARNLGRTQP AVSASLKALE VNLGIALFER EGRRLVPVPE
61 AHYLLSEAAE ILARVNTTEM NLVGMRNRTR GSLSVVGMPG PSVYLLPDFV SRFGSKADDL
121 KISLSTRSSP QILNLIAAQA FDVGFCDLGF CDMSAEDLNS SLYHTKTIMS DCLCALPAQH
181 PLAGRAVIDA RQLSGERMGV LAGTHSTNRD TRAAFEQAGA VFNPRVEAQY FIPLLRFVEA
241 GQICTVLDPL SAETYKRMNG GEVGIWFARF LPSVRFGYSI VTPKQRPLSL LAQDFVDGWS
301 DHVREIIADH S
SEQDB ID: 3101377HDR
Reference:
3101377
Name: TRAP transporter solute receptor, Isotype: TAXI family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGLQKYFIGA ALATLVSAGS VAAQDPTFFR IGTGSAGGTY FPIGGTIANG ISAPPGSRPC
61 EEGGQCGVPG LIAIAQSTTA SVYNNTAVQN GELEAGLAAA DVTRDMYLGE GKFEGKIHEK
121 LRVIANLYPE DLHLVLPKGV TINNLGDLKG KRVGIGQAGS GTQVAVLQML ENWGVTRDNI
181 EEAELNLAQS SERLADGQLD AYFYAAGWPV AAVVQLASTK GLELHSFTEE DMKVINDIIP
241 AYIPSKIPAG VYEGLDYVVN TPAVSALLVV SSDLSEELVY GITKAMWNDN TRNLLDNGHA
301 KGKLITLETA LGGMDNLGVP LHPGAERFYR EAGLLK
SEQDB ID: 3101377HDT
Reference:
3101377
Name: TRAP transporter, Isotype: 4TM/12TM fusion protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDATSQKTD TLTAEELAAI EEKYDESAAT RPVSPGFARF LKVVALSFAT YHYLTAGFAL
61 PTDHWHMGWH LSGLFILTYA LFPAIRTRGT YDLKTGLMHY GGVPYLDILL MGLGVASALY
121 LGFAWRGVPW LGIEEQTFRM GNPNGYDMLF GSILIVLVLD IARRTLGWVL PAIICVFMAY
181 ALFGPVFPGI LQHPGVKIRT FVSSMYFPQE GIFGVTLWVV STIVFHFVLF GVIAQRTGLG
241 QLFIDNATIL AGRYTGGPAK VSVVSSAFFG TISGSSVANT VSTGALTIPN MKRLGYPGHF
301 AGGVEAAASA GGQITPPIMG AAAFIMAEFL EVPYTTIVIA AIFPALLHYV GVFSVVHLMA
361 RRLNLQGLSK EMLPRLGAVW REGWANMVPL VGLLVVLFSG YTPYMSAFCG ISLAIVTGMA
421 RRSAPVTLAY PAAFIAFVVW KCTGGGFDLP MSALLVALTL LGSLNPQERI RLPQMAETFE
481 TGVKYALAVG AAAAAVGIVV GVINTTGVGF RVGFMVTQSA GELGASLHSL LSFGRFELFS
541 VTDITLFISL IFIAVACILM GAGIPTTALY IMLVSVAQPA LAQLGVPPIA SHMFVLYYGV
601 VAEITPPVCT SAYAAAAIAN SNPFRTGISA FTLGLGKIVA PMAFVYAPVL LIVSQTGFDL
661 WTFSYTATSC ILGVICLSVA VVGYWLAPMG ALFRVLLAMA GLVFIAPSLQ ADLIAALIAA
721 PAVLSQIVLR RRTTEAG
SEQDB ID: 3101377HDU
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSEEITVLGA GIVGICTALS LIERGLKVTL IDRDAPGQAT SFGNAGVISP WSVIPQSMPG
61 MWKKVPGMML DPVGPLAVSP TYLPRLAPWG MRFLAEGREA RVRAVSAAME FLNRDCIDLY
121 RRHLKGTGHE GLIRDSYYVH AYRDASAARL DTLDTELRRR AGAEVERIDA ADLRALEPAL
181 SPDFTAAVLI KGQARALSPG QLGAVLADKF QQLGGRLRQT SVQSLHRQDD GGWLCRTDQG
241 DLKAAKIVLA MGVWSARLLS PLGVHIPLEA ERGYHVTFTK PGITLNHSVM DAEMKFVASS
301 MTDGLRVAGT AEFAGLDAAL NKRRLDGLVR LACRLSPDLT AEPHATWSGQ RPSLPDSLPC
361 IGEVEGLPGL VAAFGHSHYG LMMAPKTGEL VADIVTGRMA NTDLSPYKAT RFKRFWPVSN
421 T
SEQDB ID: 3101377HDV
Reference:
3101377
Name: MOSC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSRTGPLMTE PTLNARIDGI FLGSVAERWP GRPPSAIGKT AVGGCREINE FGFIGDAQAD
61 LDHHGGHDKA IHHYPSDHYP SWIAEGQIPA EAVPAAFGEN IVSVGITETN ICIGDRLRLG
121 TAIVEVSQGR QPCWKVSEHT GNAKMAYLFQ KTGRTGWYYR VLEPGQVSPG DQISLIERHH
181 PEWTVETVTR ARLTRRITSK DAAALAELVV LAEGWRSAFA RMAAGETHED TDARLIG
SEQDB ID: 3101377HDW
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSKEYHIREL IMRLARLDVS ESWAEDLNPA QRAVLEYLSR ANKFSRSPSH VAAFLGTTRG
61 TISQTFKALL QKNYVTEKRS QSDKRVISFD LTQKGRALLA RPRLLISGLE SLDSSEQNAL
121 LSTLQSTLNS LLEQNKGQPF GLCKECRHFT SSNGGGYCNL LSEKLAPPET EQICHEQDPL
SEQDB ID: 3101377HDX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTTSGFALA ALVLSAASAT AGGDHANHAI KQEGAIKSAV DGGKVAAFDI LAAHAHRTGN
61 VVTFHMTTNG KAGENVPAAT GAVGGSDVWT YVWPTSLEPS AVGFEEGTGI LAMAATSHPD
121 FDDTPLYDEN LDGDPANDGV IWHSHWVVLT PTEECGTGAL AVRDIPEGAT PKLPATWPGF
181 PIFLDSPGFS PVFDGPEITV KAAFNSDIEL GGVSYDGVTS ALKVNANVHS PLLCVVDVFD
241 VASGNLSLPG KIE
SEQDB ID: 3101377HDY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSETWLPTLV TATPQEGFDL AVKLSRIAVK KTQPDAQVRD TLRAVYEKDA NALIAVSAVV
61 ATHFQTIAAA NDYWKD
SEQDB ID: 3101377HE
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLEGLMIGLG TAFSLTNILM VIGGCLIGTF IGMLPGLGPM SIIAIMIPVA ITIGDPSAAL
61 ILLAGVYYGA IFGGSTSSIL INAPGVASTV ATSFDGYPLA RQGKAGKALT VAAISSFCGG
121 TIGAILLMVF APALASVALL FHSAEYFALM VVGLSAIAAF AGSGQVGKAL LMTLLGLIMA
181 TVGEGALFNM PRFTMGVMDL QSGFGFITLA MAMFALPEAL YLVLDPSRST QGGESGEIKD
241 LRITRAEAKS IAPVIGRQSV QGFLIGVLPG AGATIASFLG YAVERNIAPK AEQEEFGKGS
301 LKGLAAPESA NNAACTGSFV PLLTLGIPGS GTTAILLGAL IALNVTPGPR LMVDDPQIFW
361 AVIISMYLGN LILLILNLPL IPYIAKILAV PRSFLIPFIL FFTLMGAYIG QNNSTELLIL
421 VGLGVCATVL RFADYPLAPL LIGFILGSML ENNFARAMQL YDGLGFILER PMTVGLLVLA
481 ALLVILPSYR ARRARLRAEG VADAD
SEQDB ID: 3101377HEA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKAPELQIQQ WFNSATDLTL ADLRGKVIVI EAFQMLCPGC VMHGIPLAQK VRAAFPEDKV
61 AVLGLHTVFE HHEAMTPISL KAFLHEYRIK FPVGVDQPGD GAMPRTMAAY QMRGTPSLLL
121 IDKAGDLRAH HFGDVSELLL GAEIATLLGE AAPSVQKQAG TPQGDANCDN DGCTV
SEQDB ID: 3101377HEB
Reference:
3101377
Name: MOSC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSWKGIVIGL HIAPRSFLPM KTVPQLELVA NVGITGDRYA SEDGYYSDRP EEGRQITLFE
61 AETLEALKRD CGIDLAADEH RRNVTTRHVP LNHLVGQRIR IGDCLLEATR LSTPCRHIEQ
121 ITGKDIFEPL LHRSGLHARI LEGGIIRAGD TICPA
SEQDB ID: 3101377HEC
Reference:
3101377
Name: oxidoreductase FAD-binding domain/oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVKPIHRVTT VIKETRDIAP GVRLLRLSDP DGWDLPPFSP GAHIHIHLPD GLVRPYSLCG
61 DAADRSSYFI AVQKEPDGRG GSRQVHALQQ GERILVSLPK NLLPLTNAPH VILIAGGIGI
121 TPFMPMIHEM SRQGRTFELH YASRQSDAAF LPELEALCAG RMTRYDAERG QRLRLDDVIS
181 AIDATGHLYC CGPERMIGEL LAKTGHMRDR VHVEYFGVSA DVGQQAYEIR LARSSRTVPV
241 KQGQTMLEAL RAADVDVSAS CEGGICLECK TRYLEGTPVH RDITMPKSER DTHLTPCVSG
301 CAGASITLDL
SEQDB ID: 3101377HED
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MFQAARVRRS PWTCRLVTKA TPMTDPAQPI LFLLRPDFLD PATGDGAFFC PHCLRLEGLL
61 SIYPVLRHSL QICYVDFPKP RGALAQLAGA ESQSCPQLVL PAGDDELSGR WSVAGAADAR
121 RIENTADIED YLILRYGLSD RHP
SEQDB ID: 3101377HEE
Reference:
3101377
Name: hydrogen peroxide-inducible gene activator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSGLSLRDLE YIQSIAQEGH FGAAAVGCGV SQPAISQQVL KLEARLGFAI FERQGKHVSL
61 TPSGAQFLRK AEVVLAGARE LLDMSVGLSD NLEGELRVGV ISTLGPYLLP LVLGSIKSRY
121 PQIRLRLSEE PTTVLEQMLA DRELDAILIA TEPKHQHLET AGLFFEPFAL ACPADHGRTP
181 GQPVAWADVR GAELVLLSEE HCLRDQTMAQ QRSAGQIPGK IRRISRVSNG
SEQDB ID: 3101377HEF
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTFMLSGLV IAGLACSAQA DGDPEEGKKV FKKCAACHAI EEGKNKVGPS MFGVWERPAG
61 AVEGFKYSQP MAEAGYTWDE EHLAGFLAAP KKYLPGTKMT FPGVKKEEQL ADLLAYLKTL
121 Q
SEQDB ID: 3101377HEG
Reference:
3101377
Name: FNT family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSYADTVLGF ARIARAKAEH LNADPLGFVI LTLKAGAYVG AGILLIFSVG QGVDASIRPI
61 VMGASFGIAL TLVVFAGAEL FTGHTMYMMH GVLTGRASIR DLARCWCASW AGNLAGAILL
121 AAIFVIGGGG LILAAGDEAL LYKVAAKKMH GTAPELFAKA ILCNWLVCLA LWTSARARDD
181 VTKCVLIFWC LYAFIAAGFE HSVANMTVFS VALLSNHPDG ISIAGAIWNL TWVTLGNTFA
241 GAVIMGFGYW GAASRPSFSD TGIEKSAHGK PE
SEQDB ID: 3101377HEH
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRCVLAAPA FFTALALRWG AAESPIQHVL IQMPLLVLAG ALLAWNLKAR RDWALPLFIL
61 ALSVFLFWML PRSVDWALTR AGEVAKLVSL PLLLGVPLRL SWPWLGPVLR GFLQANALSM
121 LGVLGFLYIH APIRICNSYL VSDQQDLGVG FLIAAAGLTC LWVCPVLFGQ AEQDASPPWS
181 FPGAKDLKS
SEQDB ID: 3101377HEJ
Reference:
3101377
Name: SCO1/SenC family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLRPALASVL AAVIGGGFLW YATDGAQAFT SEAARRLDVA RSPRPVPAVR LEDMNDRTIA
61 LTPQNGEVVL VEFIYTVCGD ICQIAAGDFA AIRDKLRAQG ADVRLISVSF DPLRDTPEQM
121 RIYGENHDAD GNIWTVARPA LDDLEALLTL FGVTVIPDEW GGFQHNAAIH VIDGEGRFSA
181 VFDTDAVAAV VDRVAGEPS
SEQDB ID: 3101377HEK
Reference:
3101377
Name: heme-Cu respiratory oxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTAHTPQAG AVKLTMILSG AVFALMMIFG LAMRAAQAQW IELDPAIFYQ LLTAHGAGMV
61 GTAALSGAAI LWYFCGRHLT LSAGIFWAFL GLFLLGVVLI LSAIFLGGFG GAWTFLFPLP
121 ANSGGAWGPA AAAAFMLGYT SIGVGFLLYY LELGRRIRAR YGNLTRALGW SLILGKADDD
181 VPPPTIIAAT SVTIFNSIGI VLGAAVLVAS LVHLLVPGFE VNALLAKNLI YFFGHVFINA
241 SIYMAVTAVY EILPEYTGRP WKSNRVFAIA WNVVLIFVMA VYWHHLLQDV VMPPWMLVVG
301 QLVSYFSGIP LIAVTAFSTF LYIRGSKMTW DLASSLLVLS VAGWSIGSIP ASIDGMISVN
361 KVMHNTMWVP GHFHTYLLLG EVAMAFGFMA WLVRGKAISE MVGLDRVAFY TYLAGASGFI
421 LVFLFSGAAS IPRRWAVHYE DWLTHDRIGT AFGALVVMGT LLFVLRFVAR LGRSDG
SEQDB ID: 3101377HEL
Reference:
3101377
Name: cytochrome c oxidase, Isotype: ba3-type, Subunit: I
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQSNVLLISL VLMAAMAVVF YVAARASDGP EPGPRANSKR TGLIWAMLVV GVLVSVGTLR
61 PWPHALASTD DTINVAITSG QWWWEIDTVE IPAGKPVNFS VTTEDVTHGL GIYNADMRLL
121 TQVQAIPGYT TEITYTFDEP GQYEILCMEY CGIAHHEMVN EFEVVSVEE
SEQDB ID: 3101377HEM
Reference:
3101377
Name: Rrf2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQISKFSDYA LRILIHLATS EGGLMSTREI ADLQQLPFNH LAKISQWLTH EGYVESVRGR
61 HGGMRLALPP DAISIGGLLR KSERGTPLVE CMKEGGGCCV MTPACGLLPI LIEAQEAFFH
121 SLDGSTLQDV LSGNRGMQNL IRALGVRSKY DPGSAAVQDA
SEQDB ID: 3101377HEN
Reference:
3101377
Name: cytochrome c oxidase, Isotype: III, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoP-2, Linkage: megaplasmid
Sequence:
1 MSVKEKDPVT GTALTGHEWD GITELDTPVP WAARWALWVS IAIAALFWVF YPSFPLVTDY
61 AKGLVGYSSR AEVGRVLAEA DAQRAMNFAP FANGDIAALA GDTALETRYS DAISKLYADN
121 CSACHRVDLA GQTGFPNLRD AHWLWSGAPE EIEYTIRHGI NAADEDTRVS QMPAFGTDQL
181 LDRQQIEDVT EFVLSLSEGD HNAVAAGRGQ NVFAENCAGC HGDDGRGGLE SGAPDLGDAA
241 WLYGGSRDDI HDSIYRGRQG VMPAWKNRLD DKQIRMLTLY LLWQADNAGN
SEQDB ID: 3101377HEP
Reference:
3101377
Name: cytochrome c oxidase, Isotype: IV, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoQ-2, Linkage: megaplasmid
Sequence:
1 MTHDAVLVFS KTWGAIYLLV VFVAAVLWTY WPSRRGLYDE AAQSPLQKDE DRPCR
SEQDB ID: 3101377HEQ
Reference:
3101377
Name: cytochrome c oxidase, Isotype: II, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoO-2, Linkage: megaplasmid
Sequence:
1 MSTAHQKLER HSIAFAMMIL FVASIGGIVE IAPLFTIENT VEEVEGMRPY TPLELAGRDI
61 YVREGCYACH SQMIRTLRSD VERYGHYSLA AESMYDHPFQ WGSKRTGPDL ARIGGKYSDD
121 WHVAHLEDPR ALVPGSVMPG YAFLSATRLD TGHLPAALEA LRRAGVPYTD AQIATAEQAA
181 GWQADAEQAY ESELQELFGD NVQLRDFDGR PGELTEMDAL VAYLQVLGTL VNFDTLDPEE
241 INR
SEQDB ID: 3101377HER
Reference:
3101377
Name: cytochrome c oxidase, Isotype: I, Subunit: cbb3-type, Class: EC1.9.3.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccoN-2, Linkage: megaplasmid
Sequence:
1 MPRKLTFEDL AVLLALSAVM LTGIAILGWG VPTVYVMHGW LIAGAAGWGL IWMINRATDP
61 AQDVPHAYND KATKFGVVAT FIWGVIGFAV GDILAWQLAI PDLNGDMSWS NFGRLRPVHT
121 TAVIFGFGGN ALIATSFYVV QRTSRARLAS ETLPWLIFWG YNLFMLLSVS GYLAGITQSK
181 EYAEPEWYAD LLLVVVWVGY LTLYLRTLAR RAEPHIYVSN WYYLGFIVVI AMLHIVNNLA
241 VPVSIAYPKS YSLFAGVQDA MTQWWYGHNA VGFLLTAGFL GMLYYFLPKA VNRPVYSYRM
301 SIIGFWGITF LYLWAGSHHL HYTALPDWVQ YLGTSMSIIL LVPSWASVFN GILTINGAWD
361 KVRTDPAVRF MMVAILFYGL TTFEGSFMAI RPVNSLSHYT DWTVGHVHAG ALGWVAFITF
421 GAMYKMVPWI WRRDGIYSER LEAWHFWLAL TGTLIYVGAM WNSGMTQALM WQTYDADGAL
481 YYSFLDSVLA MHPYYAARAI GGLLYLIGAL IGAYNIYMTI SGPKRETTRK SGPLARQPAE
SEQDB ID: 3101377HET
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MANIDYSRAR IISDPAPATI VRWLVAGWRD FCLNRTYSLL YGGGLVLFGW ALILLLFRNG
61 LAWALLPMLA GGVLVGPVVT VGLYRVASGK TRVAAKGQIT LVGIILMVFA MAWIRAATIL
121 FAIVYGLKPF EGFVATLSLL LSTSSGWVLL VSGTLVGGLF AALGFAVSAF SLPMLVERDI
181 DGFSAMGLSF NATTQNFRLT VLWGMTIAAL TALGILTGFL GLVIIFPLLG YATWHAYDDL
241 FRQGGGAKPQ PGSEHVRIVG EEV
SEQDB ID: 3101377HEU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSGSSLRPHQ LFDITRTEID QVVRRFYAEV RAHDVLGPVF NSAVTDWPEH EDKISGFWAG
61 AILREPGYFG NPMQVHIANP NIRSEHFPVW LDLFQKVLEQ ELTGDVASAF SLLAQRIGKG
121 LSMGIENFRQ PDGAAPNLT
SEQDB ID: 3101377HEV
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CycJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycJ, Linkage: megaplasmid
Sequence:
1 MASLKKSRRV RLILFSGVAL VSATALIGYA MRDGIQFFRT PTEVATDPPA ANEVLRIGGM
61 VEHGSLVRDG ANFSFRVTDG ETSFPISYVG IVPDLFREGE GTIATGSVIG GVFRATEILA
121 KHDEVYMPSE LAEMEALRD
SEQDB ID: 3101377HEW
Reference:
3101377
Name: 5-aminolevulinic acid synthase, Class: EC2.3.1.37
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hemA-2, Linkage: megaplasmid
Sequence:
1 MLNAPDYSSH FEDALQDLRD TGNYRVFQEH NRLVGRFPLS QVMGEDGPRT ITVWCSNDYL
61 GMGQHPVVRG AMKSAIDTYG AGSGGTRNIS GNHGPIVALE QELATLHGKE AGLVFGCGYL
121 ANLATLATLG RLLPDCVMIS DELNHASMIQ GVLASKAEKR IFRHNDVAHL EEILSELAAD
181 RCKVVAFESV YSMDGDIAPI AEIIRVSKKY GALTYIDEVH AVGMYGATGA GVAEREGLAG
241 QIDIIQGTLA KAYGVIGGYV TANAEIIDAI RSHANGFIFT SAPPPTVVAG ALASVRHLRD
301 STSERESLHR KAVLLRALLK DARIPFMDAP SHIVPVMVGD PFKCKQLSDL LLERHAIYVQ
361 PINHPTVPKG TERLRITASP LHSDGMIHGL VSALVDCWRD LQIGWATPLG SGR
SEQDB ID: 3101377HEX
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MADIFTLILV TTVFAGILLP LLRPGSDRDL GAGLEDTDPS KQWEAERARL IEQMQDNDIA
61 LAEGRIGVVL YGDTSSRLTA EANRFVDRLR KMRPLVQRPG SPQSRSTGDG ISFLSAAAVV
121 VAALGVHFAA NVNDLDMTVS PHATGAIPLA AASDEVRDPV MASLGPDGAP NIAEMVGRLE
181 ERVYDGNPTE DDIQMLLRSY RVLERGEDAI EVLQIAAERF PGNVQFKMML LRGRLQDPEF
241 DPSEDLVRTV ETVLQQEPDL LEAHWYRGLI QARQGRHEAA RETLMTLRPK LSANPRAAGA
301 VDALLAQLET TTQSDN
SEQDB ID: 3101377HEY
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CycL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycL, Linkage: megaplasmid
Sequence:
1 MKRLMLILAL IVMSFPAGAA SVSEDPTEPR VRDLAVLLRC PVCQSENILD SHSSTAREML
61 VILRERIAEG MSDAEIFEFF RTRYGDYVLL SPPMTGPGRI VWLVPAGLVL LGLGVFMLIL
121 ARHKRRAARE LKDSVLMSPL DASGLKGMEL
SEQDB ID: 3101377HF
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTSARGVKVN ILFPLAGNIP GESPAGAAGA APPCTLNPTE PETPMALDRW IALVILMICL
61 AYGYAAFFTM DAGLAPFMKR NPIWPSTFPK ILSVLAVLAA LSILLGLEKG AAAPKPMEIN
121 YRRLTEYKLG QALALLALMV AYALLLRPLG FLLSTLAFLS IGSLILGERR FHILLPVAAA
181 AAGLVWYLVQ VVLGIFLSPW PAFMVNGG
SEQDB ID: 3101377HFA
Reference:
3101377
Name: thiol/disulfide interchange protein, Isotype: DsbE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dsbE, Linkage: megaplasmid
Sequence:
1 MTIEVDMPRK KGGLEWKLPL LAALVGLPLL LGIGLTRDPN RIPSALVGKS MPAFEIPYLQ
61 RAGMLNSAEH AGKPMLLNFW ASWCTTCRVE HPKLVELGVR SQLSDEFSIL GINYRDDPAR
121 AAGFLNREGH FGYPSGYDER GRLGIDFGVY GMPETFFIDA DGVVQARHAG PVTDKVLAKY
181 LPLIGVDP
SEQDB ID: 3101377HFB
Reference:
3101377
Name: cytochrome c-type biogenesis protein, Isotype: CycK
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cycK, Linkage: megaplasmid
Sequence:
1 MIETSIELGQ FAVSLALILS VFGCFQAVLA ARSGAASRLV SARNAIFANF VLATIGCAVL
61 IQAFVTSDFS VAYVAQNSNR DLPMLYKVTA MWGAHEGSLL LWLWYLTLFS AAAVWLHWRD
121 YPKSMPWVIA TLAAIQLGFL AFVVFLSNPF LTLTPMPGNG RDLNPLLQDP GLAFHPPVLY
181 LGYVGFAVPF AFAIASLIRG QTGVEWVTVV RRWVLFAWTA LTSGIICGGY WAYYELGWGG
241 YWAWDPVENA SLMPWLTGTA LLHSMMVQDK RGMFRAWNVF LVVTTFLLTL LGTFLVRSGV
301 LTSVHAFAVD PGRGAYMLGF MTVAMVVGYG LIILRADRLQ DDGGISSLLS REAAILGNTV
361 LLLVVTATVM AGTLFPLVVE VFSDAKISIG APYYNKVIVP IMVALVFLLG LGPSVPWRQM
421 SAKRFVGRFR LPLAFAGLTA VAAVLVSEAG IITLAAIFAV GFAGFASLAD IASAIAARRR
481 VMEQGVLRAT GDVLTHSRQR IGALIIHFGV VMIGAGMIAS GLFQTTQTVA MRIGDRAEAG
541 GYTLTLRELQ DTGSANYNAR VARFSISRDG ELLFEMAPEK RFYPVREMAT TEIAIRSSLA
601 GDLYMVMGDE DGQGTVVVRI FWNPLVNWIW LGWLVLLLGA LLSLSKPSRR AARSRTPEPI
661 EGVPAE
SEQDB ID: 3101377HFC
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQVVLRIDEK DTRTLQQQVF HQIRALILEG RLRSGDPVPA SRELSQQLGV SRNTVLIAYE
61 HLLSEGYLES RANVGTFVSS ALPEMSMSTL TSPANDQPSE PSGQSPAPAC MPLLEHSVIS
121 PNRKKDTVDF WVGRSDGSAF PAREWRRILD TKLRHAKGQL SEYHDPRGLR EFRQALADHI
181 GPTRGVLAKP EDVVCVGGSQ DGLALIARAF SRTFRTFIHE DPCYLGARAV FSNFSYDTVA
241 VPVDRDGLRV DLLPETGRSL LYVTPSHQYP TGVTLSLERR LQLLQWAERT DSIVIEDDYD
301 GDFRYEGTPL TALRGLDRAG RVIYLGTFSK SFGPAIRIGY LVSTAELSDA FAMWKGILSN
361 GQPWLEQAAM ADFITGGSFR RHLRRIRSTY MARRDLLARE LTTRIPGTSI HGMRGGMHIS
421 ARLPKGICAE TLQKAAAEHR IAIYRARDCG AWLSPSNTDF DDLLVLGYAA VSDRNIRKAV
481 DVLAHAAEQQ SG
SEQDB ID: 3101377HFD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYRLLPSRTI AVLLSVIVPM AVAGIFFFSR GGSVADNTPD PYAYKVAEEE LSEETRQLAG
61 MIEGAQAKIY DLTVPETDLA LARAEVIELP GGRDLIVGWQ SRVTEPVLRS DIKPSEEIAL
121 ITALKSHLPE DAVVLAMPDL SDRLSQFAPS HYPLAAMAGQ QAYRAPAGTE DTVLRMEKRW
181 LGERSETEQP ELFRDFIDAM VAEDAYGLAR LQVMAGGSEA YIALHVRDSF DVGITAPDKI
241 LVGLKDFPGG THAHDVTRQV KTWIADQDYA AYTVSQIGDD TIRSYFLADA KDKATLLGQL
301 LPFNTARVGL VPGAKLVFQT GGYWVYRIDP VAATN
SEQDB ID: 3101377HFE
Reference:
3101377
Name: hydroxylamine oxidoreductase, Class: EC1.7.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MMAAKLNFLN KIRPALCVLF SALLITPARA EIPDALYTAL GLDKDVAPNV LYDALVKRYR
61 DPEQGAGEGA FADLWEPIPF SAYMAPQNFY QGPDLDIEVS RTECVECHES VTPGWVHSWE
121 NSVHGNLDEI RGLDASDSRH YKQELIGQVE TNLHSMGLLE EGQRLNDVGC IDCHMGVGVE
181 SGNHKTDLYM PDAASCGQCH VQEFAERESE RDTLDWPQDQ WPDGRPSHAL SYIANVETAI
241 WAGMEQREVA AGCTMCHTTQ NTCNSCHTRH EFSAAEARKP EACSTCHNGV DHNEFENFML
301 SKHGVIYNAS GDEWDWELPL AQAFEQGGQT APTCQTCHME YEGEYGHNLV QKVRWGFNPM
361 PEIADNLDHP WFEERKESWV ATCTQCHSES FARSYLDVMD QGTIDGIELV KEAKVIMQGL
421 YDDGMLTGQT TNRPAPPAPD EDAPGGFFGF FASQGNNPTA IDVEYAEMWE QHIMKHFKGL
481 AHVNPGGFTY SNGWAKLIRS LARIKDADTT LREKADMLAR IKKLEEGN
SEQDB ID: 3101377HFF
Reference:
3101377
Name: His-ol dehydrogenase, Class: EC1.1.1.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hisD-2, Linkage: megaplasmid
Sequence:
1 MPQFLDSRQP DFETAFTALL GAKREDSPDV DAVVAGIIAD VRARGDAAVI ELTERFDRVA
61 LTPQSLRFST EEIAQAVDEV PAPERAALEL AAARIRAYHE RQMPQDADWT DDTGARLGWR
121 WSAVSAAGLY VPGGLASYPS SVLMNAIPAK VAGVGRLAIA VPTPDGQVNP LVLLAAQISG
181 VDEVYRIGGA QAIAALAYGT DTIAPVDKIT GPGNAFVAAA KRRVFGKVGI DMIAGPSEIL
241 VIADRDNDPD WIALDLLSQA EHDESAQSIL ITDDAAFGRA VAEAVDKRLE TLERRAIAGV
301 SWRDFGAVIT VSDLDEAAAL SNRIAPEHLE LCVSDPEALA ARTIHAGAIF LGQYTPEAIG
361 DYVGGPNHVL PTARSARFSS GLSVMDFLKR TTMSRMTPEA LRAIGPAAAQ LARSESLEAH
421 GLSVQARLDR LNG
SEQDB ID: 3101377HFG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRQALIDLAQ ELSAVCGCYE PDALCDALGV EDRPDLRHDV LGALSRGVTE VLCPVPEASP
61 RYGWMLAPDP RAAALRRFLT RAQLDQALEL APTPWQDDLF GQVLHQLLAG AQVEVARPKG
121 SDNETRLLTH LRHNAAILDA VQFARAVPAL DARALETLES EAKRQIQEVQ KWRDLVIVLP
181 RRHFGYDNIR RRLSHFLRGK TKDTRPLLLT GTGGIGKSAV LARLLQDWQT RRDAPITVIL
241 DFDRPQLKTG APFQIAREIL NQIAVGVTRT LDPPEAAANV SKQLRMRRAM LSSTDLMGEV
301 RDHGAQADFL ESQLPGWFRG DWTHGLRSQP IALAFDSFEA VDRQGGEVVR LILAVEEQFR
361 RELPGLRCVL SGRAEPLEGE ELDDRFGPSS RRITLDGLSV EAGAQLIEEE DRRLSEEDQQ
421 RKGIDRPPVL TDETLRRTVS RLLKGHPLAL LIFVKYARTH DGDIADLIAD LEEDGAGAFR
481 SEFAHRFLYE RILDRIDDPE LRSLAHPGLV LRQINTDLIR FVLAVPCLGL PEGTVLPEGR
541 AEALRKKLEN EYWLVDPGEP PFDLRHRADV RRMMVAGLFA GPREADTAAD HKRKARLRED
601 ALAVCSAARD YFRLGPPDGS DEGARQRWQA MDPEMRNLHA LYYEAFLSPR DVPEFDAQTA
661 RALDLSLGED LETLPAAWRA RVNVLLGRVL SKEEAFDLGD DLRELAEKQE FTSAAQHGLS
721 TADEDFTTVS EASESRAGDP LGVRAHEDVY RPDGSDWRSA SRLSRDIQRA FAAARFAEVA
781 DLAPRYFEAL EFRSNKEIAE DHADAMQRGY WRHPMWQCLL VAGSGVETSA MAQAASVFLD
841 SADHQRALPG VIAFIAQQTD PMQRHKELDV LQGADFKSYV DAYRMSGSIL DGWLGRKTAL
901 MASGRGVPLS GKPISRSPRA LSLAAGRAGR AEEEFGALFE AAPDLAGRLE KFWAHGAPGI
961 SDITDLYRQF GEEEDLTRLL ASEALPQTDL AFRMFRGLNP DLYPPLRRIL EEQEGEVVLR
1021 LAEALAQRAR HWPEELRMSA LSGYSRNQSA TLVEVADQCG ELGTLCACLA EFDSRAGTVR
1081 EMFDSLSAWF FPFARDLEI
SEQDB ID: 3101377HFH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTEQDWTEER LISCVLGVVR GLHFARPQLR GWYDGWLAAR RLPGAPVSFA HAMVVTGRGG
61 GLNPARDGDA LCLALAALGG PQAVADCFAA AVSAGLFDIG ASDPLPVHRR QLAQKMISAL
121 GLKRAHATLQ RANTEALVDE TAFWTDPGNI LPGIILGRRR LCRVEALNEM GDRVTGSGFL
181 IGAFDGADQF PRDQGYDRPA AGAGRSADPL RLFRDNRHRR GQGRGVRRGR GLVDRPQRDR
241 AQTGRGLRLG QAGQAARLAA RGRWVLGLCC DPADRRAGSA TGLVRSGAGN AGRAEWGLDP
301 ASSGFGGTHD HRRQGGLWPT APAAVVSSGD YGAWLLGRAG AGPEWSTGGA ALSGARGPDP
361 SARCPSSSRA QRGGPAHRRR RRSGSQGGAG QAGRDPRPQP GGGLSGRAPT GLWPRRLHRR
421 ARAAVEGRPP HSARACGIPR GGGGHPPGQK LFGRDPARAL CRARTPSYRV SRRRRTGRCL
481 SHGLRYAGQL CPRCGGQPAR GTRHHHPGLC QTAGVEVHAA GQRPAGRPHG LDPA
SEQDB ID: 3101377HFJ
Reference:
3101377
Name: Ser protease, Isotype: subtilase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLDLLKAAAR VATPTGQEAL PTDILSFTLE YPEPVTAEAA RGAIAALLEG DRFDLFPATQ
61 ADDDMLILQF PGVPIEQSPG YLFAEAAALK EALDLVSVTP DILPPFTDAE SVPPPVENVG
121 DVIWDLCRAH TPPLADRNWA LRLIKADRAM SRFGVTGAGQ RIGQPDTGVA AHHELKHGVD
181 KARGYNFVDN TPDPTDPLLP SMGSPGHGTG TASVVISRRS GRVNGSAPRA SLVPLRTNNA
241 VVIGSWAPVA RALDHARAQG CRIVTMSLGS GFAPRLIRRA VARAVSADMI LLAAAGNCVR
301 FVTYPAFDRN VIAVAGVDHA GRRWRGSCRG PEVDIAAPAE NVHVARRRPG ETDLSDVTDT
361 GQGTSFAVAL TAGVAALWLE HHGWTALRQE ARRRGLPLQE LFRAALRQSA NAPAGWDHSQ
421 MGAGIVDAEA LLALDPADIM VGAAPESAGP AELLFGADFD AGGLQAEAEY LAFDWRLRER
481 PEASATVENA MREMPSPALA ALLGDRQPLG EPGLVLAPAA PPAPLDRAFR RLAAGRGGTT
541 ESAADLSYEA SVDRLRGEGL DTVMETVNEL FQARAESAPD LVDTDMQAEA ADKIRQAVQS
601 HLDPDRDVRL SPGEVGFALE ALVKLSGRPA IRVQADGSEL FDPLLGTWRA DLLTAVSRWQ
661 PLVRAVGRID ARNPQGVWVH VGTGFLLADG LVMTNRHVID AFAEPMPEEN GQRPFKLRFP
721 VSIIFDPDAA DETTRYTLTE VATAGGARIG RTVNMARLDM ALMRIDPDNG HAPPPDPIDR
781 GLISTTDLAL TKILVAGYPA EPRNVRGPDP RQDQDTYLAF WARLGELYGD RYGVKYISPG
841 MIEARPGAVT GDPRGWAFSH DATTLPGNSG SAILSLHNPG QLCGLHFGGQ SLETNLAHDI
901 QAVLGMGDGA FATGLLNGQG E
SEQDB ID: 3101377HFK
Reference:
3101377
Name: transcriptional regulator, Isotype: crp/fnr family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRPTSRNALP PLETVLAGVS LLAGLEAEIL SRFAADLELV TVHTGQTVME QGETSTEMYV
61 VVRGRLVGLL LSPNGKEVAF TEITAGRYFG ELSALDGRPR SLTISAAETT VLARMPAQRL
121 LDWMAREPRL AHNLAIDLAE RNRVLTERVF GLVVHDVDKR VRALLIQQAQ AARQLKPGGV
181 LDPSPTHDAI ANYIGATREA VSRVMARLSA AGVIETGRRR LEIADIEQLF EGL
SEQDB ID: 3101377HFL
Reference:
3101377
Name: adenylate/guanylate cyclase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSRTIGSVTS WLADIGLEVY AERFEQADID LEVLEHLSDQ DLTDLGVTSL GHRRKILARI
61 ADMRDAESIV APPAPVEEDQ SERLYLTVVF CDLVGSTQLA HTLGEERFTD LLGEFYRAVD
121 GAVDRYGGHV AQYHGDGVLI YFGYPQALED AALRGVMAAC ESCRQVGAIA VPGALPMQVR
181 VGVASGPVVI GDRQLSQNAR GGRAYGAVVN LAARLQAEAQ PGGVVVSDTT AALVKHHFDL
241 NFLGLRHLKG IDEPAPVYAV EARRTPDLGV ALLARPNRVP FVNRRSELAR LSACWNAVAM
301 GAFNLITVAG EHGIGKSRLV GEFLDRLRRE DRPVRHVNCP QQGRDTPYGA FRLLLDHDPN
361 LPAATALLAE LEAVPKATQA ERRQRRARVI GLLADHFGQT ESGPKVLWID DLQWADPSTI
421 EVLLTLASRR PPGLMLIVSA RNALPDQRLM KVDGLVPISL GLMSPEHTNS IVREVLGDVQ
481 GAEALVAPLV ARAEGIPVFA EELALEMRAR LAGPEDVDAE NLPDMSVPSS LQQSLQARIR
541 RLVRARPLLR LVASIGREAP VPLLRDLWSG PGSIEEALDE LIAAGLAELH LARDSQHENR
601 LILRHQILQD CAYDIILTRD RERIHTAIAE ALARRRAAGQ AVEPTLMADQ LERAGRLRPA
661 AELWAEAGRA AAAQSADAEA VALFRRALAL VPRIGATEGD WSDQFEADTL LALFPALIGA
721 KGYRAAGEDV LNRINALIER TGGSQRVFST MFFRWIDICV QGDIDAGHEF AAGLADIAHA
781 DPTGLHALVL DRMLGSSHMF RGEFDDARGY LDRFLATYDP ARHADPLRPF GATDNHATVL
841 CCVAAIEAFT GTPETTRAAT AAALAAARAT ELTHTLCHTL TFGAAFPAAI RRDWSQFRIH
901 ASELRQLAQE KELAFWLVYA RMLTGIGDIA AGRVDEGQAE YAYGSNVLGA QGFEFLQPTF
961 RVIHALAEEA AQRDGPSGDL ASLERAVRSG ERWMLPECLR LKERWGAS
SEQDB ID: 3101377HFM
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLWYDSRAQR LRERSAVWAQ NQKTDPDFDG LPPKYAEELQ KNILGTVVLP GDPEYDTDRM
61 LSNPRFSAYP QVIVYCEVET DVAECLRVAR ALSMAVVVRS GGHSTAGFSS QNGFLIDVSR
121 MNDVCISPEA LRAWVGPGTN FGKFNAKLLP YDLHTPGGAC PDVCVGGYMQ GGGYGFTARI
181 FGMNCDQVEE IRVMMTDGRI VHANAELNPD LFWAVRGGTG SNFGVLLGVK YRLYRGSTFA
241 GFSVRWSMQT DAGVQDTATS LAWLQENFMR TGAPDTMGYQ MIWAFEGPEG QAKEPVLLMR
301 GMYRGTREEL QEKLAPVLAL PGATLQAIYD PQQYIDLNRI LLSEPYEVPE FPADMTPMPP
361 PEAKISRYVA KPIDAAGWKA LLDYFRTSPS PYTIAAMEIY GGAIARMPKG ENAFFHRDVY
421 CDLFFDVFWL TEQEKETMLA FIAGWEAAFA PHWTGQSYQN YPSPDNPGFA DEYWGDTYWL
481 LRLIKHKYDP INLLRFPQSI QPLEWHPPGP GFPPGFRGFE DPIQAIAG
SEQDB ID: 3101377HFN
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDLLTVNDRP GQYPPSYYAA HASTLDPFPR AAGALTCDVC VVGGGFTGLS AALHLAQRGY
61 DVVLLEAQRV GFGASGRNGG QVGQGQRLDQ QELEKMLGRD HAHALWQVAR QSVDLVRDLA
121 ASDLVHADFH PGIIHADHRE RFVSHSHDYV RHMHEEYGYT AIRALDRDEM RHLVASDAYH
181 GGSIYDDAGH IDPLELVLGL ARMAVAAGVR IFERSKVSTL TEGDPALLRT DDAEITARHV
241 VMGCNGYLGR LDDRVAARVM PINNYIIATE PLGPERQEAL IRNNHAVADS KFVINYFRFS
301 DDHRLLFGGT ESYGYRFPSD IAAKVRKPML EIFPQLADVR IDHAWGGTLG ITMNRMPHFE
361 RLSGNVLSLS GFSGHGVALA TLAGQIAAET IAGQAERFDL MARVPGRPFP GGPALRTPLL
421 ILAMLWFSLR DRL
SEQDB ID: 3101377HFP
Reference:
3101377
Name: integral membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSAGIVAIIL SAALLHAIWN AIVKSAADRT TMLGLVASGH VLAGAVMVTL LPLPAPESLP
61 YILLSTVIHF GYYYMLGQAY RHGDLSVVYP IARGIVPALV ALWALLLLGE TLPAQAWVGI
121 ATIAAGIQLS SWSALRHGVG RAALGFAVGT GLCISAYSVV DGIGVRLSQN TLSYWAWGAF
181 LHIFIAGFVA IRKRGTLAGL KPKVWATGIL GGLVSMAAYG LVLYAKNFAP LGAVSALRET
241 SVIFAALIGF VFLGEGNWKR RLGAAALMAA GVALIGTAG
SEQDB ID: 3101377HFQ
Reference:
3101377
Name: Na/Pi-cotransporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAIFSFLISL AGATMLLLFA VRMVRTGIER AYGSSFQRVM TGNNGVMRAG AVGLVMAVVL
61 QSSAAVALLT SGFAGAGLMG FGQGLAIVLG GDLGSALVIQ ILSYRLDWLV PLLLAVGGWL
121 FVKTEQRKAR QFGRILMGIA FILISLRFLR EAMDPIRDSA FLPAIADYLA RDYVTAFIVG
181 GALAFVMHSS VAAILMCVTL VQIGAIPFSA GLSLVLGANF GSAFIPVWLS RGMTMPARRI
241 PFANLALRGT WAVLCLFAVN LALRNGFAPG PHGGQELVYA HLAFNASLLV LALPFCNLLA
301 APFARLLPDP AQPVDADTLA RPASSLDPAH IGSPAQAVSS LKRELLRMAD LVEAMFRPVL
361 GLYRDGDKTR IKAVQSLDKE VNACLSGIRR YVAALPADQI GREAARSARD MLEYAVRLET
421 AGDVVAGRLC VLAGDLRKTG NQFSKEGWSE LQHMHETILA NMKLASNVLI SDDLESARLL
481 SLEKTELKRA ERSSRKRHFR RLQNGEVQSF DTSDCHLETL RALREFNSHI SAVAYPILYA
541 NGQLLETRLI ETLPATQDED
SEQDB ID: 3101377HFR
Reference:
3101377
Name: nitric oxide reductase, Subunit: F protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRAFLCDPLS RAWLALLGLS LAGALLTLAP VPQALIGSGV LILALIKARL ILSRYLELGQ
61 SPAWMRGIGT VLTGFVLLLL ALSLL
SEQDB ID: 3101377HFT
Reference:
3101377
Name: nitric oxide reductase, Subunit: E protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MWVLILSELL VFGAGLVALL AVRLSDPAGF AEAQDHLYRT GAALNTVVLV TSGFLAACAL
61 RWRRSGRRAR ARWALLLAAG LGALFLVIKG AEFAGKAAQG ISYDTHPFFM FYYLLTGFHA
121 AHVLAGVAIL LLVAWRDAPR NIEAGAQFWH MVDLVWVLLY PVVYLAG
SEQDB ID: 3101377HFU
Reference:
3101377
Name: nitric oxide reductase, Subunit: D protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: norD, Linkage: megaplasmid
Sequence:
1 MVQIDFEPWE PEETIGKLWH SLASRLDAPL VHEGAAVDLS EVAGRLAVLF RGLGGSAGVE
61 LRPVSPEISR HRLSWRRRLG TEAEALPRAS FDGEVLRLPD RLAVFPMRAA NGALYVWLAA
121 AAAHAGTRVE EDDPLRADLR ALSAARAMVA ATLADAPGLR PLYAELCKGL LQQRDLPNLP
181 PAEAAVEELI RLMLGDPQPL SARAAQFQAM DETLTAPHGY QPFRPVPLWP ELRAVALSEH
241 HEAESRDTEG PPEDSGEKTH RARRRKSDMA ARHDSFILHK FEAILSWAEF LNLNRRVDDD
301 DPDNAKKAAD DQDEIGLGQI SKAPPTRLKL HLDLAPEDVD RERLSGRVLY PEWDVRTGAY
361 LTDHVNVLTS EAEIRDGAEA FTHDPATARR IRAVKRQFEA LRPGRMMTRG HLDGDQLDIE
421 AAVRGHLDRL ANGEGSERIW MQSRPVARDL AVSILLDVSR STESAVSGRA VIDIEREALA
481 ALAWGLDACG DDFAIHAFSS LKRARVYVQR CKGFGEMMSP QVEARIASLR PGFYTRLGAA
541 IRHASADLAG QGRKRRLLLV ITDGKPNDLD HYEGRHGIED TAMAVREARR AGQSVFGVTI
601 DKSGKSWFPR MFGQGGFAVI PDPNRLTLAL PQIYRQLVGA
SEQDB ID: 3101377HFV
Reference:
3101377
Name: nitric oxide reductase, Subunit: Q protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: norQ, Linkage: megaplasmid
Sequence:
1 MQMDGSKHMG TGAADAPFYL AQGDECDIFT AAYDNNLPVL LKGPTGCGKT RFVAHMAAKL
61 GRPLYTVACH DDLAAADLIG RYLLKGGETV WVDGPLTRAV REGAICYLDE VVEARKDVTV
121 VLHPLTDDRR ILPIDRTGEE LEAMPGFMLV ASYNPGYQNI LKTLKPSTRQ RFISLEFDFP
181 APELEARVVS QESGLPLERC KPLIRLAGKL RGLKGQDLEE GVSTRLVVYA ATLIAQGMPT
241 ERAILAAMVE PLTDDEDIKR GLLDLTTAVF G
SEQDB ID: 3101377HFW
Reference:
3101377
Name: nitric oxide reductase, Subunit: large, Class: EC1.7.99.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: norB, Linkage: megaplasmid
Sequence:
1 MKYESQKIAL VYFAVAMGLF AIQVLGGLLA GWIYVAPNTL SELLPFNIVR MLHTNSLIVW
61 LILGFFGAAY FLIPEEAERE IHSTKLAYIQ LAILVLGTLG VVVTYVFNLF EGHWLLGKEG
121 REFIEQPKWV KAGIVVAALI FLYNVSMTVL KGKKTAITNI LLLGLWGLAL LFLFSFYNPS
181 NLALDKQYWW YIVHLWVEGV WELIMASILA YLMLKLTGVD REVVEKWLYV IVAAALFSGI
241 LGTGHHYYWI GTPGYWQWIG SIFSSLEVIP FFAMMAFAFV MVWKGRRDHP NKAALLWSLG
301 CATLAFFGAG VWGFLHTLHG VNYYTHGTQI TAAHGHLAFF GAYVSLNLAI FSYAMPILLN
361 RDPYNQVLNM ASFWLMSSGM VFMTFVLTFA GTIQTHLQRV LGEYFMDVQD QVAIFYWMRF
421 GSGLVVVIGA LLFIYAMWVP RREIIERGTA ETPAE
SEQDB ID: 3101377HFX
Reference:
3101377
Name: nitric oxide reductase, Subunit: small, Class: EC1.7.99.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: norC, Linkage: megaplasmid
Sequence:
1 MREVMTKSMA RNIFYGGSLF FILIFLALSA HSHMYIRSTS TNAETLTASV ADGKHVWEKH
61 ACINCHSILG EGAYFAPELG NVMTRWGVQD DPDAAFEMLK GWMEAQPTGI EGRRQMPRFD
121 LSDTEMRNLS DFLLWTNTID TQGWPPNDAG
SEQDB ID: 3101377HFY
Reference:
3101377
Name: Mg transporter, Isotype: CorA-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRAHSLTPIC IFDFEDGRAI PVAEDWPAAA PASGAGFRWL HLDLSDPASA DWLHAHIPPV
61 AASALAQAET RPRCDPLADG ILLNLRGVNL NPGSAREDMV SLRLWVTPAL VVTARIRRIR
121 ATDELRQQSD SGRGPGSVAL FLSELLHGLS HRIETVSLEL DDRTDGIEEE ALQGAGDMHD
181 RLSALRLTVI KLRRYLHPQR EALDALLRNE AGLFDSAGLV LLREAVDRTR RTIEELDATR
241 DRLAAVQDQI ASEQVRLLGR NSFVLSVVAA VFLPLGFLTG LFGVNIAGMP GTGTPLAFWL
301 LAGASALLGL AIVLLFRLLK WL
SEQDB ID: 3101377HG
Reference:
3101377
Name: Bordetella uptake gene family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTNLTRRVM MAAASAAFAF STPSWAEPVV DSIHFLIPGG AGGGWDGTAR GTGEALTAAG
61 LAGTASYENM SGGGGGKAIG YLIENAASNH GTLMVNSTPI IIRSLTGVFP QNFRDLTLVA
121 GTIGDYAAIV VGKDSPVNSM TDLLASFDAD PSGTAIGGGS VPGGMDHLVA AMVMEAAGKD
181 SLAVKYIAYD AGGKAMAALL SGEIAALSTG FSEAVDLANA GEVKIIGVTS DDRVAAYPDA
241 PTMKEQGIDT TFVNWRGFFG APGLPEDRLA AYQEAIAKMY DTPEWEAVRA RNGWVNIHNS
301 GDDFRAFLEK QEQQIGDLMR KLGFL
SEQDB ID: 3101377HGA
Reference:
3101377
Name: NnrS protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTALARLFSE GYRVFFLAAG LYGLFAGAIW VLYLAGDGPA LAQVPSQWHA HEMVFGYATA
61 ALGGFFLTAV PSWTGAPGAR QGFIALAAGM WLAGRLAVWY AGVLPPVWVA VLDLAFLPVL
121 SLKIVTQLLK RPKPQNLMFL LFLAYLWAAD LWLHLDWIGT GYGDTETGLR AGLAVLCALI
181 SVLGGRITPA FTRNAMKRAG VAETLWPVSR APLERAAVVL ALLLPGMVLG GAPAGLSGAV
241 ALAFGAVQAL RLMRWGGLWC LSQPILWALH LALAMLAAGM ILWGLAGLGL GSELAALHLL
301 GIGCVGGMTL AVMSRAALGH SGRPLVAPGP MVLGYGLMAA AALTRWAGSG FEALYLPAML
361 LAAALWTAAF ATYLAAMWPA LIGPRAGAAG
SEQDB ID: 3101377HGB
Reference:
3101377
Name: cytochrome cd1 nitrite reductase, Class: EC1.7.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirS, Linkage: megaplasmid
Sequence:
1 MALGLAAPMV AAQDSHGSDA GAAYQPSMTT LGALNLEIPG RREGDPVMTQ EEYNIGNKIY
61 FERCAGCHGV LRKGATGKPL TTDITRDVGY EYLRDFITYG SPAGMPNWGT SGEMSEEEID
121 IMARYILLDP ASPPEFGMAE MRETWKVLVA PADRPTEKMN DIDIDNLFSV TLRDSGQVAL
181 IDGASYKIHA VIDTGYAVHI SRISASGRYL FVIGRDALVN MIDLWMETPA TVAQIKVGSE
241 ARSIETSKFK GFEDMYAIAG SYWPPQYVIM DGDTLEPLKI KSTRGMVYDD QSYHPEPRVA
301 SIVASHFNPE FIVNVKETGK ILMIDYSDIK NLKVTEIEAE RFLHDGGFDS SKRYFLVAAN
361 ARGKVAVVDT KDSTLTALVE TGGQTPHPGR GANLMHPTYG PVWATSHLGD ETVALIGTDP
421 EGHPDNAWKV VQTLYAQGGG SLFVKSHPTS EHLYVDAPLN PDAEISGSVA VFKLGDLAQE
481 EPEYTVLPIV EWAEIGEGQP RVVQGEFNQE GNEIWFSVWN AKDLESAIVV VDDKTLELKA
541 VIKDPRLITP TGKFNVYNTR ADVY
SEQDB ID: 3101377HGC
Reference:
3101377
Name: nitrite reductase heme biosynthesis protein, Subunit: E
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirE, Linkage: megaplasmid
Sequence:
1 MTPAGHVHLI GAGPGDPDLL TLRALRLLQE AQVVVYDRLV DPRIVAMAPE GARMIPVGKS
61 PKCHPVPQDR INRILLDEAR AGHVVARLKG GDPMIFGRGS EEAAFLMAHG VRVDYAPGIT
121 AAQGASSATG VPLTHRGLAT GVQYVTGHRQ AGQVLDLDWK RLADPDTTLV VYMGVANIGQ
181 IAIGLMTENL PATTPVLAIS RATTPGERRL LSRLDRIAAD ARAEALEAPT LFIIGKVVSL
241 YAQQPVTDLL EQAVAHG
SEQDB ID: 3101377HGD
Reference:
3101377
Name: cytochrome c55X
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirC, Linkage: megaplasmid
Sequence:
1 MQAGTALGTG KALLTIAAFL ATTAFAAETL DPDALRRLVQ QDCGSCHGLT LKGGLGPDIR
61 PEALGHFDRE VLTGVILDGI PDTAMPPWRP LLTEEEAEWI ARYLQDPEAR
SEQDB ID: 3101377HGE
Reference:
3101377
Name: cytochrome cd1 nitrite reductase, Class: EC1.7.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirF, Linkage: megaplasmid
Sequence:
1 MKPLVLTLVA ALMAGTAGAQ TVATGDLGLV IERATGSVLL VDQSERAALA RIEGLGDLSH
61 ASLVYSPDER FAYVFGRDGG LTKLDITTRQ IVNRVLQSGN AIGGAISDDG RLVAVSNYDP
121 GGVRVFDADT LEMVADIPTG GKTIGLVDAP GRRFVFTVWD TGETWIADFT SPEPMLTTIP
181 GMGKNPYDAL ITGNGRTYIT GLFGEDGLSA LDLWDETPQP IRVLPGYGRG QQEMPVYKMP
241 HLEGWALTGR EFVLPAVGHA QVLWVDADTL TETGRTATHG QPVFAMARPD GRQVWVNFAH
301 PLNDTIQVID TVSKEVIHQF KPGPAVLHME FTPRGHEVWI SVRDAGKVMV YDTRTFEKLR
361 EIEADSPSGI FFTVRAHRTG L
SEQDB ID: 3101377HGF
Reference:
3101377
Name: nitrite reductase heme biosynthesis protein, Subunit: D/L
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MCQITDPVDR ALLDDWQRNF PITDRPFLGL AEQLGISEHE VITRLARMQA AGRITRVGAT
61 IAPGSASAST LAAVAAPEDR IEEIAGMIGA EPGVNHNYQR EDDWNLWFVA TGPDRAHVDA
121 TLARIGAASG LRVLDLRLLR PFNVDLGFRM GAGAPRVPTR RAVDASVLRP GDTDLLQALT
181 QGLPLVPAPY AALAEGLGLT PSAAMARIAL LQQAGVISRL GVIVRHRALG WSSNAMVVWD
241 LPSERIDSAG PTLAAHPGVT LCYERRPVPG VWPYRLYTMI HARSRREALA VLDSAKALPE
301 LADTPHKVLF STRCFKQTGA LIKPRKEEAA
SEQDB ID: 3101377HGG
Reference:
3101377
Name: nitrite reductase heme biosynthesis protein, Subunit: G
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirG, Linkage: megaplasmid
Sequence:
1 MTPDATDRRI LNRMQEDLPL TAHPYAAVAA ELGLTEDDLL ERLARMKAAR LITRFGPFFD
61 AAAMGGAFCL CAMAVPEAEF ESVLTKVNAH PEVAHNYERT HRLNMWFVLA TETPQGIAAT
121 ADAIETETGI AVLRFPKLQE FFIGFRVAA
SEQDB ID: 3101377HGH
Reference:
3101377
Name: nitrite reductase heme biosynthesis protein, Subunit: H
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirH, Linkage: megaplasmid
Sequence:
1 MIDETDRRII AAMQEGLPLV PAPFARVAAD LALPEPELME RIAALKARGV VRRIAAAPNH
61 YKLGMTSNGM TVWNVDDARI ADLGARVGAL PFVTHCYERP RALPDWPYNL FAMVHGADRD
121 EVEAKRAEIA ALLGTACRGH DILYSTRILK KTGLRLKERT
SEQDB ID: 3101377HGJ
Reference:
3101377
Name: nitrite reductase heme biosynthesis protein, Subunit: J
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirJ, Linkage: megaplasmid
Sequence:
1 MFRLTEYMHQ LIAPTPVRQR RPGPVKPVVI WNLTRRCNLK CRHCYTVSAD VDFPGELSHE
61 QAMETLEDLG RFKVPAIILS GGEPLDRFDF FDIAMRARQM VPMLALSTNG TRIHGETADR
121 IADVGFSYVG ISLDGIGATN DWFRGVEGAF ADALRGVRAC KARGIKVGLR FCLTEGTQHH
181 LPNLLQLCDD EGVDKFYLSH LVYAGRGDKN RGEDAAHLRT RHAMDLLLDR AWVAAAEDMP
241 LDIVTGNNDA DAGYFLDWVR RNFDAAKVAH IRAHLAAWGG NSSGLGVANI DNLGRVHPDT
301 YWSDYTVGNV KTAPFSQLWT GDDPMLALLR TRPRPLKGRC GACTLKDVCG GNTRIRALQL
361 TGDPWAEDPA CYLSDAEIGV TGSDRLTVTP FRGKKHDPAH QFF
SEQDB ID: 3101377HGK
Reference:
3101377
Name: nitrite reductase, Isotype: N, Class: EC1.7.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nirN, Linkage: megaplasmid
Sequence:
1 MLAGPVVAGP AEDYAEYCAS CHGAARLGGL GPALIPETLG RMRGPKVAAV IREGRTATQM
61 PGFSDTLDEA AIAALAEYVK EPLAEIPAWG EGEIMASRVL DGDYVAAAAP VWDADPMNIT
121 LVVETGDHHV SVLDGDTFDV LDRFETPFAV HGGPKFSPDG RYVFIMSRDG WVQKYDLWSL
181 QQVGRVRAGL NSRNIAMSHD GKWLAVANYL PMSLTLLSTE DLSVAKVMKV TAKDGTPSRV
241 SAVYQAPQRQ SFILALKDAP EIWEVATDPD AHPVYEGFIH SREKGMVEAI ASSEGLFARR
301 RIEISEPLDD FFFSDDYRNL IGAARDGVRG VVVNLNVGRE IAELPLEGMP HLGSGISWAR
361 DGRRVMATPH LKEGKLSVID TESWTRIATI ETEGPGFFLR SHENTPYFWA DVFFGPNKDA
421 MHVIDKQSLE IVRTLRPAPG KTVAHVEFTR DGKHALVSVW EEDGAVIVYD AATLEELRRL
481 PMKKPSGKYN VWNKITFSEG TSH
SEQDB ID: 3101377HGL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLLWPAVTAT VAINLFMAAL MLRVLGGTPL GPVAALLWSL PLGIPASWLA GRWLRRLLDE
61 AES
SEQDB ID: 3101377HGM
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVAKQISKAD IHLLRVFCIV VDSQGFSNAQ VALNVATSTI SRQISELETR LGMRLCDRGR
61 SGFRVTEKGE TVYQAAQKLF GALGEFQETV DGSRGRLFGH LALGIIENWA SNTSAPIVQA
121 LSRFTDLAPD VTIELHSLAP DDIEFAVLDG RVPIGIGVFH SPKPGILYTK VCEERVCLYC
181 GSGHPLFHMT NLEDEERVLR QAQFAKRAYL NEDVVAPKTR NLPSNATAHQ MEAIALLILT
241 DKYVGYLPSY FAEEWVAKGR MKIVAGGSFD RPVSVQTATR RGMKLNSVGR TFLDILTAEA
301 VKQGG
SEQDB ID: 3101377HGN
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MENLTRWMTT TVMLSLGTSA FAADVVIGVP NWPSVRATAH VLKIVLEDNL GLEVELQNGS
61 NPIIFEAMDA GAMQVHPEVW LPNQSNLHNT FVKEKGTVAM NPNGIAADQA MCVTRGTAER
121 TGIKALSELS DPDMAAKFDS DGDGLGEIWI GAAGWASTNV EKIRAKSYGY DQTMTLKEMD
181 ETLALAEVDA ATDQDTNIAF FCYTPHHMFQ LYDLVLLEEP PHDPAQWKVA QPTDDPNWLE
241 NSSAAVAWDK AYLHIHYQAE MDPAAAAVLA KVDLTSDQVS AMVYALIVDG MDAEAFARNW
301 VEENADQVDS WLN
SEQDB ID: 3101377HGP
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.32
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: opuAA, Linkage: megaplasmid
Sequence:
1 MGTDEVIRLE RVWKVFGEQA EDAIAAIQAR GLSKAEVLGE FGCVVGIANC SFSVKKGEIF
61 CVMGLSGSGK STMVRHINRL IEPSAGSITV LGQDVLALSP DQLRKMRATN LGMVFQHMAL
121 LPHRTVRDNV AFPLQVRGEP KSRRWEVSQR CLEMVDLQGY EDRFPRELSG GMQQRVGLAR
181 ALASDPDVLL MDEPFSALDP LIRRQLQDQF MALSAELGKT TVFITHDLDE AIRIGTRIAI
241 MKDGRIVQIG TPEEIVTRPA DDYVRDFVDG ISKLKLVFAH SIMVPISQYR AKHWENLDAS
301 IRVSHATDLD HLIDVSTATE QPIVITADDG TDVGVIDKPT LLKGIQGGKA
SEQDB ID: 3101377HGQ
Reference:
3101377
Name: Gly betaine/Pro ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDMGMQGGP VAPSTAVGDF AGQNGAYYSA AFKRIQDTTG FAWSWNTMAA LFGPIWGAAR
61 GVWGFFWMFL VLELFALVQL GRGLWGELGS QQLAKLDRAL ANIAKREAQA AELQAAGDAA
121 GAEAKLKIAE NLKKVAARAQ EQADLAAAEA TSILLIGLAL LLLVKLLEGF YANIAYEAHY
181 LKWRAKPQSQ QAGIRTSSIV FGVVMVLAIV PLTLLRFTVT NPDQVLARLT GGLFGDTIPV
241 THFPVEKEYF SALSKRGDAG FDWAADNFSD AFDGITAGIR WFLDGLEILL LQTPWPVVML
301 VIVVAASRLA GLRVAIFTAA SLAYLAFMGL WELSMITVAL IGTGAILCIL IGVPFGIWFG
361 KSRRAYAIAE PVLDFMQTMP AFVYLIPIIA FFGTGKPPGV LATLIFAMPP VVRLTALGMR
421 GVPETTKEAA IAFGCSPWQL LFNVELPLAL PSIMTGINQT ILMSLSMVVI ASLIGADGLG
481 ALILESLQYA AKGQGLLGGL AILLCAMVID RIAQGIYRKR VGGA
SEQDB ID: 3101377HGR
Reference:
3101377
Name: agmatinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDPHLNSMM ENLYWWGIPT LFRCPNLPPA GQDIALVGVP HSTGNGTTER DQHLGPRALR
61 NVSSMQRRMH GGFGLDPWSA AKIADLGDVP FPRANDNEDC IEQITRFFRE IDAAGARPIS
121 VGGDHSITGG IIQALGCGAI TRGQPVCLLH LDAHTDVFTK VDHFLGARKS AAHWGAYLAD
181 QGKVDPGHSM QIGLRGHART LDWLQPSYDY GYNVVTMKEF RQRGLADVVA QIGEVLAGRP
241 VYITFDLDCL DPTIAPGVSN IEAGERGFDI DEAIGLLNAV RGLNIIGGDI VCMMPTKDSP
301 NQITALTAGA VMFEMISMVA ENIANQARGA GT
SEQDB ID: 3101377HGT
Reference:
3101377
Name: agmatinase, Class: EC3.5.3.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: speB-4, Linkage: megaplasmid
Sequence:
1 MSQKDTEFFQ PVSGMDLPRF AGVPTFMRLP HVTPDHAAYD QVQIGLVGVP WDAGTTNRPG
61 PRHGPRQLRD LSTMIRAGNP ATGVNPFALV NCADLGDVAP NPIDIMDCMD RISRFYAGLK
121 SSGILPVTAG GDHLTTLPVL RGLASDAPVG LIQFDSHTDL FDSYFGGNKY THGTPFRRAI
181 EEGLVDPRRM VQIGIRGTAY NTEDVEWGEA QGVRIIRIEE FFDRGVADVM AEARDIVGDK
241 PTYCTFDIDF VDPAYAPGTG TPEVGGPNSF QALQVVRELS GLTLIGADLV EVSPPFDAQG
301 NTAWLGASIL FEMLCVCAKA ISARARDA
SEQDB ID: 3101377HGU
Reference:
3101377
Name: C4-dicarboxylate transport sensor protein, Isotype: dctB, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dctB, Linkage: megaplasmid
Sequence:
1 MRLRSFVFPT IATAVVAISV FKVSYGYFQS EERTKARGRL SLYQTSVSGE LERFSHLTYV
61 LARDPVVIET ANGGARRDLN IRLEAFAKQA GLDAIYLIKP DGFTIAASNH REPGSFVGQN
121 YAFRPYFQDA LAGQQGRFYA IGATTGLPGY FIADAVHGDP ETPAGVIAIK ISLTKLEESW
181 LGSGEQVFLA NQDGVVLLAS DPAWRYKTLS PLSDMRRQEI KAARQFSGQE LDPLDWAVLP
241 DRRARIAGSE RLHLVGSDLP HGWELHFFAS DDQALTRSWL VTALVVILAA IGFIAFQIQR
301 ARRVDAELRR SAREEAELRL ANEQLAKEIQ ERMTAERRLK RTQSELERAS RLAALGRLAA
361 SVTHELGQPI AAMRNHLVAT EMAGGAQTRL AANIAGLVER MEGITRQLKF FASSTTEEFT
421 AIDLRDAIRV SLDLVAPNLE QSGTGVRLDL PDTPVHIRGI RLRIEQVMTN LLRNAIDATE
481 DSTDPMIRIR AGTDSDDAWV EIKDNGHGLG TATLADLQEP FVTTRESGRG MGLGLAISAS
541 IVKDHDGKMS ACDSDTGGAV FRVTFPLTAS EDG
SEQDB ID: 3101377HGV
Reference:
3101377
Name: C4-dicarboxylate transport transcriptional regulatory protein, Isotype: DctD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dctD-2, Linkage: megaplasmid
Sequence:
1 MEERRPYSIL VIDDDKSMRL SLVDLLEAAG WQVEAIARAT LVAAKLDDNP PDVILSDIRM
61 PGMTGLELLS SLDHASAPPL VLISAHGDIP MAVQAMRDGA YSFVEKPYEP RRLLSILTHA
121 AEQNRMQQDN SRLKERLIRL SGLDRILLGQ TAEIVSLRQD ILDLAGTRAT VLITGETGTG
181 KELVAHALHD LGGDGQAPFL ALNCAALSQD TFETEMFGIA GQSEGRLAKA SGGTLFLDEI
241 CSCPAAVQAK LLRVLEDKQI LPVGASSAIK AEFRVISATS EDVQDAVSAG RLRQDLLFRI
301 NTVVLGLPSL RHRRDDLMLL ARHFLEHYAH VYELAVPKMS QDDMAALLAH DWPGNVRELR
361 NVCERRVLAA RRGGGSMARA IAADQQLDDV PGTLREAVAV FERELISKAI QAHEGRMDAA
421 AEALGIGRRT LNEKIVKLGL DKGALL
SEQDB ID: 3101377HGW
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQNTLKGVAI AALTVSFVGE AGATEWNVSV WGKRRAFTEH VEKLAELVSE KTGGAFTINV
61 SYGGLSKPKE NLDGISIGAF EMAQFCAGYH ADKNRAITVL ELPFLGVNTL AEEVAVSNAV
121 YAHPAAQQEM AQWNARLLMT SPMPQYNLVG TGAPRDELAE FEGMRVRATG GLGAAFSAVG
181 GVPTSVPATE AYNAMESGVV DTVAFAQHAH LSFGTINKAD WWTANLNPGT VNCPVVVNID
241 AYEALSDDER AALDSSVDEA IAHYLTNYGA LLKKWDDVLA EKGVEKVMIS DAVLEEFRAK
301 VAGPISAKWV EDMTAQGLPG QELLDLVHAT LKAARGS
SEQDB ID: 3101377HGX
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAGHASVLQD GSALSRLDRA LLRLERGLAL ISGLAVFSLM LLAVVSVGGR NAMNAPLPGY
61 VDWIEQAMPL IAFMGIAFVQ REGGHIRMDL VIGQLKGRAL WLFELISVLL ILGLMMLLVW
121 GSWAHFLRAF DMGAPLWSRD SSIDIGIPLW PSKLLAPVAF SVLCLRLGLQ VWGYGRAFVL
181 GLEAPVAVPL IQDVAAQAAA EAEQLAGHDN G
SEQDB ID: 3101377HGY
Reference:
3101377
Name: TRAP transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDSIDIGLWV TGGLLVLVLT GMRVAFAAAL AGLVGLVWIF WAKFGYDPDR FGKALTVAVK
61 TAGQVPHSKV SSQALSLIPT FILIGYLAYY AGLTRALFEA AKRWMAWVPG GLAVSTVFAT
121 AGFAAVSGAS VATSAVFARI AIPEMLAIGY NKRFAAGVVA AAGTLASLIP PSAILVIYAI
181 IVEQDVGKLL LAGFVPGAFS AVIYVALIVG IAVVFKSVGP PVTGFTWRQR FASLPGALPI
241 VFVVVIIISF VYNPFGGDAW GTPTEGGALG AFVVFCMAVF RGMKWAEFKS ALLETAKLTV
301 MIFTIIWGVL IYVRFLGFAD LPGAFSDWIT SLQMSPMLIL VCILLAYAVL GMFMDAIGML
361 LLTLPVVYPA VMALNGGEAV SAADSAFGMS GPMCAIWFGI LVVKMAEFCL ITPPIGLNCF
421 VVAGVRPDLS VQDVFRGVMP FFVADAVTIA LLVAFPQIVL WLPGQV
SEQDB ID: 3101377HH
Reference:
3101377
Name: DNA-binding response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFLLVEDNQ SLASAILDRL RLDGHVVDHA ANISLAEEFV ITTDYDLILL DIMLPDGDGR
61 SFLKMQRDHR SETPVIVLTA RSEVSDRVGV LDLGADDYLT KPFDFSELEA RCRAVLRRRG
121 GRSSNQKRIG GLTFDPLSGL LEVCGLEVPL RNKELRLLEI FLAAPDQIFS KARLVDRLFS
181 YDEEVSENAI EVYVGRLRKK IAGSGVEIQT VRGLGYRIRL Q
SEQDB ID: 3101377HHA
Reference:
3101377
Name: gluconolactonase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MFGVLEGTGF ETIELEFNAC FIGHARVERL WTGARWSEGP AWFPAGRYLI WSDIPNNRIM
61 RWDETDGSVS EFRRPSNNSN GNTVDGQGRL VSCEHLARRV TRTEHDGEIT VIAEAVAGKR
121 LNSPNDVVVK SDGSIWFTDP AYGIMMDYEG DRAESEIGAC HVYRWDPETL RVTAVATDFV
181 KPNGLAFSAD EKSLFVSDTG GTHQEGGPAH IRKLTLMPDG KGVSGGEVFA ECSNGFFDGF
241 RLDRDGRIWS SAADGVHCLN PEGRLIGKIH IPEIVGNLCF GGAKLNRLFI AATSSLYAVY
301 LNVNGLK
SEQDB ID: 3101377HHB
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDSRKPGHRP VTMRDVAKAA GVSRMTVSRA LKKDSPISSE TRERILKVVK DMNYVPDQVA
61 GSLTTKRSGF VGLLLPSLNN LHFAQTAQSL TDVLEQGGLQ LLLGYTAYSP EREEQLVETM
121 LRRRPEAMVL SYDGHTEQTI RLLQRASIPI VEIWEKPAHP IGHTVGFSNE RAAYDMTNAL
181 LARGFRKIVF LGEKDDDWTR GAARRAGFKR AMREAGLNPD QEIRLGAPPL SIEDGVAAAE
241 LILQEYPDTD CIFCVSDMPA FGLLSRLKSI GVAVPEQVSV VGFGNFEVSR FASPEISTVR
301 VDPIAIGRET GSLILRLLDP KQRSPQTAQH ITLPPVLEFR PSLKNL
SEQDB ID: 3101377HHC
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MINGKNLIDG VWVGSDNVAH SADLAGQSFA LATKAQVNAA CQAARRDFRA YSKTARGERA
61 AFLRAIAEEI DKLGDEITRT GMAETGLPEM RLIGERGRTT GQLRMFADLI EGTDYLDIRK
121 DGALPDRAPL PRPDLRLTHK AIGPVVVFGA SNFPLAFSTA GGDTASALAA GCPVIVKGHS
181 AHAGTADLVA QAIETAILAC NMPKATFQML QGSGREVGSA LVQHPEITAV GFTGSLAGGR
241 ELYDQCHARP HPIPFYGELG SVNPMFCLPA AMDARAAEIG AGWAASLTMG AGQFCTNPGI
301 AVMVKGDPAD ALEAACVDAL RKTPEQKMLT DGIHKAFESG VKGVSGLIEE VAGCGTAKAA
361 RSGLPALFKV TARAWMANPI LQQEIFGSAG IIVLCDDVAE MVELAEILEG QLTVTLHLDD
421 ADADLAAVLM PIVEEKAGRI LANGFATGVE VCSSMMHGGP YPASTDVRAT SVGTLAIARW
481 LRPVSYQNIP SALLPSELRE
SEQDB ID: 3101377HHD
Reference:
3101377
Name: dihydrodipicolinate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSTRYTGIWP VAPTPFHDDG SLDLDGMKRV LDCLIDQGAD GICILANFSE QFLISDAERE
61 TLTRLCLEHV AGRVPMIVTI SHFATQIAVE RARFAKGLGA DIVMMMPPYH GALLKGTAQQ
121 TFDQFKAVGE VGIPIMVQDA PLSGVDLPVP LLVRMAQEID MVRLFKIECP RAANKLRALI
181 EQGGAAIEAP FDGEEAITLL ADLDAGATGS MTSGMIVDQI KPVLTHYHAG RLDEATAAYG
241 RVAMAINHEN RQCGWQSCKA AMVEGGVIRS DFCRHPIDPL HPAIRARLID LLRPLDPLVL
301 NWGK
SEQDB ID: 3101377HHE
Reference:
3101377
Name: galactonate dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSKIKSVRTR VWNWTGPTVP PTGNFCTNAS DVLWDKGDAM SSFRFHQWLT CEVETDDGTI
61 GIGNAALAPT VVKKAIDDWF APMVIGEDPF DYAYLWEKMY RRSHAWGRKG IGMTAISAVD
121 LAIWDLMGKL TGKPVFKLLG GRTKEKIPVY YSKLYSGPID TMQAEAEEAR KNNYPGYKMR
181 FGWGPKDGMA GMRENLKRVE AVREVIGYDV DLMLECYQGW NLDYTKRMLP KLVKYEPRWL
241 EEPVIADDVE GYRELNAMNI VPISGGEHEF SVIGCKDLIE KKAVSVLQYD TNRVGGITAA
301 QKINAIAEAF QVPVIPHAGQ MHNYHLTMAN ANCMISEYFP VFDVEVGNEL FYYIFEGDPA
361 AVDGFLDLDD NIPGLGISIT DKYLKHFEIQ E
SEQDB ID: 3101377HHF
Reference:
3101377
Name: Thr(4-OH) 4-phosphate dehydrogenase, Class: EC1.1.1.262
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pdxA-2, Linkage: megaplasmid
Sequence:
1 MSKPRIAIVP GDPSGIGPEL IAKLLNDEGV LEAANVLLVG DRHLWEQGAA QAGQEVPLNS
61 LDPRAIPIQT GLAHLNMQTI DPSEISIGEV TVAGGTTSLR CLEKALDLAQ AGLVDGVLFG
121 PFNKAAMTAA GLNAEDEHKY MARYLGFAGY HSEINVLDDL MTTRVTSHIG LKDVAANISQ
181 EGILRAVNLA NDTLRKAGKA RPRIAVAALN PHAGDNGKFG REEIDILEPA VRQAQEKQLD
241 VTGPWPSDTV FLKAKRGEVD AVVTMYHDQG QIAIKLMGFE RGVTVAGGLP IPVATPAHGT
301 AFDIAGQNKA NVGATRQAFD LLVRMAKTHR ADREAASGDT Q
SEQDB ID: 3101377HHG
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSQTMMLIEK SSHCVSWYDT ETGALQGRLA LPDFPHEFVV DQDNHYAYVG HYGVQNSGVE
61 GTDGRSVIVI DIRKQEIVHR YDLGEHARPH GISLDAQGRL YVLSEWSGHL LVKENPRAFD
121 QGWDHVTPVG GEKPHLFALT GDGRTAYSMN LNSGDVTVLD PYDPTRIPVS IKTGEKPEGR
181 CLREEAGVLY TSQRISNTVA VVDTKTLQVQ RIFPTPQDPC RVYYDAKRNR LVTMNHHGGS
241 FSVFDEATGE MLHEQKTPAN PLALCIDDEA AYAYIAIDCE QVQRFNLDTF EVVQTFDTGK
301 EPDVMVILPE GYSKHWEVNA
SEQDB ID: 3101377HHH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MENTIKTRAL THKGTMKMLE AAIAEAEKIG QPQCIVIVDA SGELLAEVRM SGAKFLSRKS
61 ARSKALTASS IGAPTTNIPE AVRPFIASAT GGDVTGLPGG LPIISESTLL GGIGVGSGSG
121 NQDIAVAKAA LAAIGAETDF A
SEQDB ID: 3101377HHJ
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNTLKLLAGA AAALAMSLSA AAAETTLKLA HAAPETDLQQ AMSLFFKEQV EARSNGSVKV
61 NIFPSGQLGN DAQMIDGTRA GIIDISMVGL NNYSGLMPES AAFTLPFMFP TRDAAYRVLD
121 GDVGQGVLAD MAQFGLKGLG FPENGYRNMT NNRGPIKAPA DVAGLQMRVN NSKALNDMFA
181 ELSANPQQIP VAELYTALET GVVDAQDHPI GVTLSFKFYE VQKYLSMTRH AYSPLALTMN
241 HKAFEGLSDD EQKIVLDVAK EAVDLQRKLS IEKEDGMIAD LEAAGMTVND DVDGAAFQAA
301 ITPVWDSFVA QHGDGLIKAI LAASK
SEQDB ID: 3101377HHK
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTLALFLGVL LVSIFLGLPV AFALLLASIA LMFQLDTFST DILAQSLING VDSFPLLAIP
61 FFLVAGEVMS AGGLSQRIVR LATSLVGHRR GGLGYVAIFT SILLAGLSGS AVADAAALVS
121 ILYPMMKKAG YPEGHSMGLL ASGGIIAPVI PPSLPLILIG VAGGISIKSL FLGGIVPGLL
181 MGLTLVLVWG VLMRKEDLEV APRATAGERL RAVREGFWAL LLPVIIIGGI RFGVFTPTEA
241 AVVAAVYAIF VSTLVYRELN LKALFHVLVS AGRATAMVMF LVGCAMVAAW LITIAQLPQQ
301 LAAMLGPLVD HPRLLMAVIM LIVLAVGMVM DLAPTVLILV PLLMPVVKLA GIDPVYFGLM
361 FVINTSIGLI TPPVGNVLNV VCGVGRVPMS AAVRGVAPFI LAYLALLALF VVFPNIIITP
421 MKFIIG
SEQDB ID: 3101377HHL
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRLRCNNTGA SGVRVSKTRS VGRPIHMLNW LWKSLDWLIA GLTIGMIGLV FANVVLRYGF
61 SSSLRPSVEL SRLGLVWVVM MGAVVALRRN EHLAVTEFSE TLFPRLVPAL RRIGWVVILV
121 CVSMLFVGSF NQMNANWGNI SQLTGLPSAL FYLAGALSGA LMILISVVRI FSLQAFQHEL
181 GE
SEQDB ID: 3101377HHM
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSLKKNKKIG HKVTLTDVGE LAGVSAMTVS KVLRGTGRIP EETRKRVRLA AQELGYVTNQ
61 LASLLAGASS NMVGVLIPTA RDVVYSDILS AINSELRPAG LRTFIGESYF DSDVDFEQVS
121 SFLSIRPAAL ILHGGITRKA ETLKLLKKQH CPVIQIWDVE NTDFDISIGP SHVEAGRLMA
181 EHFLSLGLER VGYVGAEMEL DICAAVRANS FERTLNAHGV QLIRSVAEDL PRQAEGGEIL
241 TRRLLDHHPT IQGIHFLNDA MALGGMRVSF ERGISVPDQL KIGGFNATSY VHSVRTRLTT
301 ISMSYQNIGR KAAQGVIALY SGEQVPQIQV EPITLERGNS T
SEQDB ID: 3101377HHN
Reference:
3101377
Name: ribose ABC transporter, Subunit: periplasmic ribose-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MATSAFCAIS SAALADGGQT KLPLLELPGI EDRDYWVPGE VNVEGKLEAM QAVVGAKAVP
61 FAGTQAEPIQ IAMIYPSADT SDFWARNYIA MTKRLEELGI QFETTEFASR QIEHSLQSTY
121 ANQVVQDADL YDFVIFGPSE LAIQADNIDK MAASEGFSTF VWAFHTPLKD LKNQPDGWFD
181 FSSAAGALTM CDYMLGRLGN DVTMAMNRGI PGITDDQRSG DFKACVEEKG NWTTIYEHYG
241 EYQREGGFEG TSLILQAYPE ATVIHNANTA MAMGSVEAQI SVGKEKEVFS TGWGGTGLEL
301 DAIRRGELDA TPMRMGDDVG AATAEAIKAH LEGRSDELPF VFLGRITVAH DQMSAEEIDA
361 LEAEAFRFSG VGALER
SEQDB ID: 3101377HHP
Reference:
3101377
Name: ribose ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rbsC-1, Linkage: megaplasmid
Sequence:
1 MTTTTTNLQS KTLMERLEPY LAIIGPMVMI FAILLFMGVA EPARYFRLSN LNLILLDAAL
61 YMPMAMAMTF VITQRGIDLS IGSIAALSGI LMAFLIKQYG FPAWVAMPLA IVLGATMGLI
121 NGLIITRFKV PDLIGTLAMD LVYRGLALVI AKGLVLARFP DLITEMGRGQ IPGFIPVPVV
181 IGLLTMALGY WALTRTHFGR YTISIGSNPE ASEMTGIAVD RHKIYAYVLM GASAALAGVM
241 LTGKLNAIQA TSAPYFNLHV IAAVVVGGTS LFGGRASMLG SLAGVLLLSM MINALVTLRI
301 EFFWQSVASG AVIVSSVALY TWMQKKDRDG SRSLLAGLRT SEAQKLMKFS ALLIGLLILL
361 LAVGAGLATD PKPTG
SEQDB ID: 3101377HHQ
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDQPLVRMR GITKRFGGVT ALQDVDLEAY SGEVLAIVGD NGAGKSTLIK ILTGVYQATE
61 GEIFLDGKRL EMSSHSDAIK VGIDAVYQTL ALADHLTPAN NMFLGNELTK RVLGIPMLDN
121 RRMKSEATRI LDERLGVRLR SMDVQTDSLS GGQRQAVAIA RAVYHEDLRL LVMDEPTAAL
181 GPQETARTLK LIKSLRDQGL AVILISHSLD DVFEVADRVH VQRRGRAVGV VNTAQSSVQE
241 VLGLIVGAQD AAA
SEQDB ID: 3101377HHR
Reference:
3101377
Name: ribose ABC transporter, Subunit: periplasmic ribose-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLKRTFMAVS TAALLSGLGV PVFAETPFDG PTTGPAAAEG KSIVVVAGDL KNGGILGVTN
61 GVKEAVEAIG WELRILDGAG SIQGRTAAIG QAMALRPDGI IINGFDAVEQ QAALEGVVSA
121 SIPMVAWHSG PKIGCDAPGG IFANVSTDAM TVSEVAAKWA MEEGGSNVGA VIFTDSTYQI
181 AIDKADRIKE TIEAMGGTVL EYVDTPIADT SSRMGPLTTS LLQKYGDQWT HALAINDLYF
241 DFMGPALASA GIKSADGPQA GSAGDGSEAA FQRIRSGNYQ AITVAEPLNL QGWQLVDELN
301 RAIQGEACSG YVTTPALVTK DGLEKLGESN QFDPDSPYRQ AYQAIWGN
SEQDB ID: 3101377HHT
Reference:
3101377
Name: ribose ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rbsC-2, Linkage: megaplasmid
Sequence:
1 MQSLESNALE PTKAELKNAS SRTRLLRLLP VYGLVILTAF LILLFSILLP NTFPTILNLR
61 AIISDKAIIA LLSLGAMIPM AAGRIDLTVG YGIVLWHILA ISLQTLYGLP WPIAVALVLA
121 LGLLTGFLNG LLVEVAKIDS FIATLGTGTV LYALALWHTG GRQMVGALPD SFYAINGTFV
181 FGLPITGFYV LGITVAMWLV LEYTPVGRYL YAIGANQRAA QLNGIPTRKF VIGAFMSSGF
241 ITAFAGVLLA SKLRIGQASV GLEFLLPALV GAFLGSTTIK PGRVNVWGTI IGVTILAVGI
301 SGIQQFGGSF WVEPMFNGVT LLIAIGIAGY AQRRKGAKK
SEQDB ID: 3101377HHU
Reference:
3101377
Name: ribose ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rbsA, Linkage: megaplasmid
Sequence:
1 MSGALQSNLF FDGIQKHFGG TYALRDVSLN IERGEIVALL GENGAGKSTL IKILGGIHKP
61 DEGRVLIDGQ AYEHRPGGFG ERQSVAFIHQ DLGMIEWMTV AENIALALGY SRKAGLISWR
121 SVDAFAQQAL DKVGCDIDPT TRVQDLSRTE KSLVAIARAL AVDCDFLVLD EPTASLPADE
181 VERLFEALRP LKQQGVGMIY VSHRLDEIFQ IADRVAVLRD GELVGMRSIS HTTPEELVFM
241 IVGRKTRQVI KPQAAPGDTI LDVQELQVDA AGPVDFKLRR NEIIGLVGLR GAGHEHVSRA
301 LFGCEPFSGS VSLNGQVPDL TSPQGALSSG IGLVARDRTA ESVAMSLTIR ENTFLNPAAV
361 GRSLFSFLTP RQETALAEQI GSDVALSPND QSMAIESLSG GNQQKVVIGR WLETKRQLLI
421 CEDPTAGVDV GAKAEIYALL NTALEEGVGI IVVSTDFEEV AAICHRAIVF SQGKIAGELT
481 GTELTTENLI QVASASNVAT N
SEQDB ID: 3101377HHV
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSSTQNKPNK NNKVSLAQIA KAAGVSKMTA SRVLRDEGGF SESTRARVMA EIDRLGYVPN
61 RLATVFAGDQ RSTFVGVSIP ELGNEIFAQV LEGIDRKLGA FGHQTVLGMT EHALEQEEKW
121 LETVLSWQPA GLIVTGRSHT PKSIQLLSGA GIPLVEIWDF NSSPLDMSVG LNHFDSGYSM
181 GRYLTGLGYR QFGYVGTSHD TANAASARLA GYAKVIGDSG GSLKKQLLLK DAPGFYTGYY
241 GTEQLLAANS DVEVIYYQND NMAVGGLNYC QKRGLSIPGD IGIAGWGDLP IASILPYRLT
301 STAVPHLRIG MIAAEMVLSQ INGEARRRSQ DVGFTLIPGS TVRSQLE
SEQDB ID: 3101377HHW
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MFKPHGRHLI AGKWVDGDDS FSSEPAHGPS HRFAVGRVAD VDAAATAAEN AFWSFASSTR
61 AARADLLTAI ADEIDACGGA ITEIGTQESG LPEARLIGER GRTTGQLRLF ATHILKGDYL
121 DRRHDAALPD RQPLPRPDLR MIQRPIGPVA VFGASNFPLA FSTAGGDTAA ALAAGCPVVV
181 KAHGAHPGTS EIVAEAVKAA IERCGFHPGV FGLIQGGNRQ VGAALVQHPL IKAVGFTGSL
241 GGGRALFDLC AARPEPIPFF GELGSVNPMF IFAGALANRG SAIAQGWAGS LTMGAGQFCT
301 NPGVAVMLAG PNADAFAQSA AEALAQVAPQ TMLTDGIAEA YRAGQRRMGA ATGVRELLST
361 PCDQRSAAPS LYATTAKAWL ANEELAEEVF GPLGMIVTAD SVEEMLAIAR DLQGQLTCTV
421 HVDAEDAAAA TRFMPVLERK AGRILANGFP TGVEVSDTMV HGGPYPASTN FGATSVGTLS
481 IRRFLRPVCY QDMPEGLLPA DL
SEQDB ID: 3101377HHX
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGGKRAIKRQ SLPDVIADDI RERILNGDLT EGMTIRQEAL AEEYTVSRMP VREALKRLDA
61 EGLVQLTNNL GATVTKHSLD EISEIFDLRI LIEVDLFRRA IPVMAKADIE RCERILEAME
121 SSYDADDVAK WGALNYKYHA ALYAPARRSL TNDVLQRVNL QSDRYVRMHL SVMRQRDPAR
181 KEHRELLELA QAGKVDEACA LLTRHISQTK QNLLTLMAAK RASDTA
SEQDB ID: 3101377HHY
Reference:
3101377
Name: FAD-binding oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEGRDIIVVG AGIIGISTAL RLQSCGFKVQ VLDRAGVAGE ASAASAGAFA FADVVPLATP
61 GIMKKAPKWL LDPLGPLSVP PAYALKIAPW MLRFWRASWR DRFAAALDAQ ARLNGFAKEA
121 LERQIAEVDG EPFMQRDGQL QLYEGAREFH ASLEGWEHRR RRGVMFVHLH SPEAIAEIQP
181 GLAPRFTHAG YTPDWLNTVD PRRWAEHLAH RFQQRGGVIG SADVRSIERH GAGAKLKTAA
241 GDILASRVVV AAGAWSHHLA RTLGDRFPLE TERGYNTTLP AGAFNLRTHL TFSGHGFVVS
301 RINGGVRVGG AVELGGLDLP PNFKRADILL QKAARFLPGL TTQGGQRWMG FRPSMPDSLP
361 VIGASARLPN VVYAFGHGHL GLTQSAATAE LVADLVSDRV PALPMAPYAP SRF
SEQDB ID: 3101377HJ
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDRLRSSGS IRRRLTIQLV GSAAVLAALL FLIVQTFTRE LAEETHDRIL LASATSIMDA
61 VSVRAREVSV DLPYAALSML SNVSDDRVFY RVMLGAETLT GYDDLPVPRP EPRAIGAMFE
121 TLVYKGESVR MATTVRWLSR NGVSTPLTIS VAQTRTGQTE RLADLTRTAL LLGAGFFAVA
181 VLLAVWTAQS SIRPLRELAG MVSRRGPTDL RPVTRPVPAE MAPLVRSLNS FIDRLRLSLS
241 RSEDFIAEAA HRVRTPLATV RTQAENTLHR IERPENRNAL REMIRAIDES SRAAGQLLDH
301 AMVSFRADSL ERTPFDLTDL VAELVNRLRP VADLKDIELF LEISGPHVMS GDPILVQNAV
361 RNLLDNAIKY APEESRVIVS LAGDATTHVL CIRDAAGGFH EDEIDGLTER FVRGRNAEGT
421 VGSGLGLTIA REVAEAHGGR LDIANTKDGA GACVCLHFPS A
SEQDB ID: 3101377HJA
Reference:
3101377
Name: TRAP transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAPLLMFAAL FVLVFAGVPV AFSLIIIAVV FGYTVFGDLI FLQLYGPLLS TASNFVLAAI
61 PLFIFMGAVL ERSGIARRLF HALQLWLGGF PGGLSLSTIA MCAIFAAASG VVGAVEIVVG
121 LMAIPPMMKA GYRNDLIAGT ICAGGSLGTI IPPSVIVVVY ASIAQLSIGQ LFAASIMPGF
181 LMVVFFVGYI LIRSLRNPAD APPLPIHDRA IPLKEKMTIS LTAMLPPLAL IVMVLGSLLA
241 GIASATEAAA VGAAGTLLLT LMFRELTLKL VMDSLGVTLR ITAMIMLIVA GGTMFTSIFA
301 VTGGGGLVRD AVESIGYGNF GIIAFFLTVV FFSGFVLDWV SIVLIFVPIF APIVKSAGID
361 PIWFAMMVLV VIQTSYLTPP MAPSIFYLRS IAPRSMTYGQ MYRGVLPFVG AQMLVLVVIV
421 FFPATVTWLP SILVGL
SEQDB ID: 3101377HJB
Reference:
3101377
Name: TRAP transporter, Isotype: DctQ-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIPFQTLCER FSKALGFLGR MAIFSLIVAM LYEVVARYAF GAPTLWAFDI SYMLNGSIFL
61 LGAAYSLQED AHVRIDFLSQ RFPLRIQQLL NGAVYLLVMA PITFAFTWVA ATKALKAFST
121 GEVESVSPWA PLVWPFYGVI ALGLIAFALQ FVVEALKYLS GQKQPGTAES EITELEI
SEQDB ID: 3101377HJC
Reference:
3101377
Name: TRAP transporter, Isotype: DctP-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKISSFLTAG ALALALSGPA LAAEVEWKMT AGVGEGSFLY QNFMERFVGN VATLTQGRVE
61 ITSFGAGVLA PAFKAYEVVQ DGIVEAGHST PSYLVNQDAT NAIFASFPGG MSAEATLHWV
121 YEGGGEEMLQ TFRREEMGLH SIVVGIGTSE IMAHSNVKIE TVEDLAGLKY RTSGAFAAVL
181 QNEFGGVPTV VPGNEIYTLL QRKGVDAIEW STPGANITEG FHEVAPYMIM PGVHQPSFLW
241 EVFVKQETWD ALPADLQTLI TAAAKLTTYE GYTRFGDSDV KAMADFRNTN VELVVMARAE
301 SEKIREAGRN WAQTQAKTQS EAGSRRMQDI LDSYLAYQSN WAANSGYLVR DGAE
SEQDB ID: 3101377HJD
Reference:
3101377
Name: Pro racemase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHVIDSHTGG EPTRVILSGG PHLGSGPLSE RAARLARESR AFYRSVMLEP RGQPAMVGAL
61 LVEPVDPDCI TGVIFFDAEA VLGMCGHGTI GLTVTLAHMG RIRAGTHKIE TPVGIVEVCL
121 SDANTVTITN IESRRVHRAR QVDVDGFGPV TGDVAYGGNW FFIVDPSPIP IERTNIRALS
181 DAALAIRTAV IANGIGGEEG QPIDHVIFYE MSPRSAVHSR SFVFCPDGTY DRSPCGTGSS
241 ARLACLAAEG LLNAGEEIIQ ESVIGSTYRL SYQPGPNGGV IPKITGQAHV MAESTLHFHT
301 DDPYRNGICH APQ
SEQDB ID: 3101377HJE
Reference:
3101377
Name: dihydroxydipicolinate synthase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSNIFTGTMP ALMTPCRADR TPDFDALVRK GTEMIAAGMS AVVYCGSMGD WPLLSDEQRM
61 EGVERLVKAG IPVIVGTGAI NTRSATAHAA HAQAVGAAGL MVIPRVLSRG SSLVAQKNHF
121 KSILSAAPEL PAVIYNSPVY GFATRADLFF ALRSEHPNLI GFKEFGGKDD LRYAAEHITS
181 QDDQVTLMVG VDTEVFHGFV NCGATGSITG IGSALPKEAL LLASLSQKAA AGHPEARKRA
241 LELEDALGIL SSFDEGTDLV LFYKYLLVLN GEEEYRLHFN ETDALSDAQR NYCEQQYALF
301 RTWFAEWSKQ GGVLAECM
SEQDB ID: 3101377HJF
Reference:
3101377
Name: transcriptional regulator, Isotype: IclR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQERLIRLLE AIAGAANPPN ATDLAQLTGL PRATIYRNIS SLVDCGFVEV TDCGSRYVLG
61 MRFVKIALTG KSDMHVINAV SAMMQQVVKT SGETGFLARY RGGRVDLIHI ETPADPSLSY
121 IYPGLGPRPA HACSSAKAIA AFITPELRDE LLDIQPMRFN QNTITDPDQI QRELNQVRRY
181 GYAICDGEID EGVSSVAVPI NVDRLGAIFS MGVVGPSNRI KPMVQNRILP VLSAEAVRAA
241 AAIQHCSVVD AETTNAEALA DAREGLNKTH
SEQDB ID: 3101377HJG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKRREFGALA AGALAMGLPF RAFADETCQS PYMPKITGQE EFVYVWTLGV EGMGDEQDKL
61 VTIDLRPGSA TRGQVINSVS VGGRNEAHHG GFSADRRFFW TGGLDTNRIF IFDVHSDPSN
121 PKLHKTIDTF VKDSGGVVGP HTFFALPGSM MITGLSNDDD HGGRTALVEY NDDGEYVATY
181 WMPTADDMQG AVAVGDAVAD GYGYDIRALI RKNVMLTSSF TGWSNYMMDF GQMLQDAEAM
241 KRFGNTIVQW DLHTRQPKKV FNVPGAPLEI RFPWGSNANY AFSTTALTSQ LWLIYEDDAG
301 EWQAKAVADI GNPADIPLPV DISIAADDQT LWINSFMDGK TRLFDISDPH KPFQIYEKVI
361 DRQVNMVSQS WDGKRVYFSS SLLANWDKKG KDDAQYLKAY NWDGKELVED FAVDFYELGL
421 GRAHIMRFGS SALYSS
SEQDB ID: 3101377HJH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRKRFLLSGL TLVAAATVVG WQVWSPVPPA RPSPMSSVFE ASDAYQFDPP APGSYRLNRI
61 KRAPDGRVLD IAGTEHSLHD LTRGKISLVS FVYLTCGDVN GCPLAMSVFF DVHDASGDLP
121 GLNEDVQLLT ISFDPARDTV EAIEAFAYPI TSDEQAGDKL NWQVLTTSGP QELRPILDGY
181 GQVVDRSEDQ ETISHLLRLF LVDRQGDIRN VYGLGFLDPR LLLTDIETLL MEEAGA
SEQDB ID: 3101377HJJ
Reference:
3101377
Name: methylamine utilization protein, Isotype: MauG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIRALATVLA LIAPAALAGD YGTALPAPIS AETCPADPES WTKAALERSL TAQLGLPLVP
61 HPADNPPTEA KIELGRKLFF DRRLSINRTM SCAMCHVPEQ GFANWELATA IGVEGRSVKR
121 NAPSVINVGF LTPLFHDGRD PALETQFVAP LVARNEMANP SIGHVVAELN RLPDYRRLFD
181 AAFAAPASLD RIGQAFGAYQ RSLTLGNSAF DRWYYGGDET ALDAAAQRGF ALFSGTAGCA
241 SCHVIETDHA LFTDQAFHDT GYGRMREERR QNPPASHPVQ VAPGVVHQVD FSRIRSVSAP
301 READLGRYEV TEDPADRWTF RTPGLRNLAV TAPYMHDGAL TTLGDVLEFY NAGGAGHPGQ
361 DARIRPLGLS PDELADIQAF LMALTSEGLD CLVAEARSHP PDNF
SEQDB ID: 3101377HJK
Reference:
3101377
Name: glutathione-dependent formaldehyde dehydrogenase, Class: EC1.2.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRTRAAVAVE AGKPLEVMEV NLEGPKAGEV LVEIKATGIC HTDEFTLSGA DPEGLFPAIL
61 GHEGAGVVLE VGEGVTSLKP GDHVIPLYTP ECRQCEYCLS GKTNLCQAIR TTQGKGLMPD
121 GTTRFSMLDG TPILHYMGCS TFSNHTVLPE IALAKVRPDA PFDKICYIGC GVTTGIGAVI
181 NTAKAEIGCR AVVFGLGGIG LNVIQGLRLA GADQIVGVDL NPDKVAMATR FGMTDFVNPA
241 EVEGDMVAHL VELTRGGADY SFDATGNVGV MRTALECAHK GWGESIIIGV APAGAEISTR
301 PFQLVTGRVW KGTAFGGAKG RTDVPRIVDW YMDGKIEIDP MITHTLSLDE INKGFDLMHA
361 GESIRSVVVY
SEQDB ID: 3101377HJL
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSNSTDEDAE LGQRLRVIRE RAGLSQRALA KRSGIPNSTI SLIEGGKINP SVSTLRRVLG
61 GIPIGLSDFF AFEPEQEKAS FYAAEDLTEI GKGKLSLKQV GSNLVGRAMM ILYETYQPGA
121 DTGRVMYGHE GEEGGVVLSG RVEITVGSQR KILGPGDAYY FDSRAPHRFR QVGPETCTIV
181 SACTPPTF
SEQDB ID: 3101377HJM
Reference:
3101377
Name: 4-aminobutyrate aminotransferase, Class: EC2.6.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gabT, Linkage: megaplasmid
Sequence:
1 MKNAEIARRR DAAIARGVGM QTQIYVERAA GSEVWDVEGN RYIDFAAGIA VVNTGHCHPR
61 VMQAVRAQAE AFTHTCHQVL PYESYIRLAE RLNDRVPGDF DKKTVFVTTG AEAVENAIKI
121 ARAATGRPAV IAFGGAFHGR TFMGMSLTGK VMPYKTGFGA MMPDVYHVPF PVELHGTTTD
181 EALAGIAKLF KTDLDPGRVA AIIIEPVQGE GGFYPAPAAL MRGLRALCDS HGILLIADEV
241 QTGFARTGHL FAMEGYDIAP DLTTMAKGLA GGLPLAAVTG RAEVMDAAAP GGLGGTYGGN
301 PLGIAAAHAV LDVIDEEDLC HRANELGSRL KQRLTQVRER VPEIVDVRGP GFMIAAEFNT
361 ADGGAPNPDF ANAVRAQALS RGLVLLTCGV FGNVIRFLAP LTIPEDVFAE ALEILETSIL
421 AVKGG
SEQDB ID: 3101377HJN
Reference:
3101377
Name: succinic semialdehyde dehydrogenase, Class: EC1.2.1.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gabD-3, Linkage: megaplasmid
Sequence:
1 MTTLALNDPG LLETRAYVNG VWIEGGARFA VQDPATGDLI AEVADLGAAD TAAAIDAAHA
61 AGPGWAALTG KERGAILRRW HDLMIQNADD LATILTAEMG KPWAEARGEI LYGASFLEWF
121 AEEAKRVYGE TIPGHQRDKR IVVLKQPVGV VGSITPWNFP NAMIARKVAP ALAVGCTFVA
181 RPAELTPLSA LAMAVLAERA GVPAGVFNVI PSQDAAGVGA ELCANPKVAK ITFTGSTRVG
241 RLLMQQCAPT IKKMSLELGG NAPFIVFDDA DLDAAVDGAM IAKFRNNGQT CVCANRIYVQ
301 ARVYDAFADK LAAKAAQLRV GNGFDTGVTT GPLINSAAVS KVEAHIADAL AGGAEVVLGG
361 TRAPLGGTFF APTVLRDVTR DMLVCREETF GPLAALVRFE SEDEVIDMAN DSEFGLAAYF
421 YSRDLARVWR MAEALESGMV GVNTGLISTE VAPFGGIKQS GLGREGSRHG IEDYLELKYL
481 CLGGIG
SEQDB ID: 3101377HJP
Reference:
3101377
Name: fructokinase, Class: EC2.7.1.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cscK, Linkage: megaplasmid
Sequence:
1 MILCCGEALI DMIAAPTIGG GHGFLPQPGG GALNTAIALG RLGQRVGLVT ALSRDMFGQR
61 LAEALTASHV DLSGAARVDR PTTLAFVQLR DGQPEYAFYD ENSAGRMLSA TELPPLPPEA
121 SALCLGGISL ACEPGADAYA DLLERHGAGR VVLIDPNIRP ALVGDEARYR ARLGAMIARA
181 DILRLSDEDL GWLCPDAPDL RAGARTLLAL GPALVVVTRG AAGATGYLPE GAEVSVPAPR
241 VNVADTVGAG DTFIAGMLSA LAEQGLLTPA ALAGLRAEAL KPALTHGARV AALAVSRPGA
301 NPPWAHELAP PPG
SEQDB ID: 3101377HJQ
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPGLPYLRAG SGPALVFVHG YLGGAAQWAQ EIERFKDAFD VIAPNLPGFG AAADRPGCAS
61 IEEMAAAVLG LLDELGIAEF LLVGHSMGGM IAQQMAADRP DAVKRLVLYG TGPLGLMPDR
121 FEPIDTSRER LLADGVDCTI RRIGATWFRA GAAAAAYPLL VEIGARANPQ AAMAGLGAMA
181 AWDGRAALPR LSMPTLVLWG DCDKSYRWPQ IHTLWSNIPD ARLSVVPGTS HAVHLEKPGF
241 FHSILADFLT EP
SEQDB ID: 3101377HJR
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEWYVVGLGL LGLLMLFISI GLPIPFALAA ASLPFLWQIQ GWKTSIVSSE LKLWGVWIDY
61 ILLAVPLFVF LGELIGKSKI GPNLYQFLHQ GVRLRGSAAY GSIGASAGFG AVCGSSMVGA
121 LTIGGVALPE MLRLGYGKRL SSGVLAAGGT LSVLIPPSLI LLFYGIVTDQ SIGDLFIAGV
181 IPGIILVSSF VVVVLIWGIL RPEDIPGSED AAKMPMRMIV ATVGPVMLIG LVITVAIYAG
241 IATPTEAAAV AASLTVLLAF WVGGLTWQGF KEAIFSTMRT MGYLGLLLSA GVLFGFVLTY
301 YRVPQQFTEL FLSFDLSPYT VLAIVLVFYI ILGMFLEPVS MTFITLPTIY PLMSAAGFDL
361 IWFGVVYTIT MEIAVLTPPV GLNLYVIQAI SRDQVTIGDV IMGCLPFIGA MILLIAVLIV
421 APDVALWLPE QMR
SEQDB ID: 3101377HJT
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNDGIDRLIR GVERGVVWLA GLGAVIVLVQ MVWITYGVFV RYGLGKPDRM VTEATALLLF
61 PVAFAGLAFA LREDAFPKVT MLTDQLRPGA RRFFDILNHL LMLGVGGFFA YAGVSATIRS
121 FNSGVASEIL HWPRYMFWAP GAVALVLFTL YTALRLIRLI MRPAPTGDL
SEQDB ID: 3101377HJU
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYLNLKTATA SALALACGLA AGTASAETTL RLSTYVNEAD IRYAGFTHFA DLVAEKTGGS
61 VKVEVFPSAT LHGWSEGVDS VQGGVSDISW INADNRLPCY AVTSLYPAEV SLEDQTGLDA
121 AYAALIRDEA ANAGLVPLFN SNYSYDQEWW FEEPVADIGN LDGKLVRSIG PLVSMMIETW
181 GGEPVFVAPK EVFQSAERGV VDGINMGVAT YSSWKLWTVM PYMVNANLFY GNIQYMMNKA
241 KFDALSADEQ AALTAAAAET EAWLQPRYEA WVDQQVGNAV MQGGGAAVSI SDDQRASLIA
301 SVKPKWDETV NAACGGELAD SIRALLASHA P
SEQDB ID: 3101377HJV
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDINWLRDFT CLARTLNFTR ASEERNITQS AFSRRIKSLE NWLGIPLIKR STYPVQLTEA
61 GQQFLPVAQE TIASLTDIRQ VLRAQEQGVT AFQRFAVLHT ISVNYLTRRI AEFEDLIPNL
121 RVRVYSDNLR TCCQLLSDGT CDFLLYYRHQ DVQPVFEEKQ FARKDIGVEL MYPVAETGAA
181 RAGGWDLDGD GRQPIPYLSY DPSSFLGTVV DQTIGTRTPP LAIRYMDALT EAIKRRVLSG
241 SGMAWLPESV IAEELAAGRV TIIGGPDWQA PLTLSLFCSR DRLDETGQKV WNAL
SEQDB ID: 3101377HJW
Reference:
3101377
Name: long-chain fatty acid-CoA ligase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MANPLYDRLF GAHAGQDTPF LYLPDGRVIS HAAFLGQAAR LAHVATNLGL KPGDRVAAQV
61 EKSPEALALY AACAQAGLIF LPLNTAYTAD ELSYFIDNSG AALIVCDGRN RDMLAPIAEG
121 LGARIETLNA DGSGSLTERA ATMPDRFDTV ARGGGDLAAF LYTSGTTGRS KGAMLTQDNL
181 LSNAETLARE WRFTADDVLL HALPIFHTHG LFVATNIALI TGGSMIFLPR FDLDQIIAQM
241 PRATSMMGVP TFYTRLLGDA RFTRELAQHM RLFVSGSAPL LAETHVEFEE RTGHRILERY
301 GMTETNMNTS NPYEGARRAG TVGLPLPGVE LKVTDPETGE TLPQGEIGVI EVRGPNVFKG
361 YWQMPEKTAA ELRADGFFIT GDLGFVDEQG YVTIVGRGKD LIISGGFNIY PKELELLLDD
421 QPGVLESAVI GVPHPDFGET PLGLLVPRPG QTPDTQAIMA TVETALARFK HPRKLIVLEE
481 LPRNTMGKVQ KNILRDQFKA LFEKQ
SEQDB ID: 3101377HJX
Reference:
3101377
Name: oxidoreductase, Isotype: GMC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDRFDFIIVG AGSAGCVLAE RLSASGRHTV LLIEAGGSDR RFWVKVPLGY GKTYDDPSVN
61 WCYTAQSDPG LAGRAAFWPR GRVLGGSSSI NAMAYVQGLP HDFDDWETAG ATGWNWQAAR
121 DTYARIETRD RPGTDGRRQL SGSGPVHVSD VGDRMHPFSE HFLSAAAQAG WPLLDDLNGP
181 ERTGIARLQG TVRNGRRWSA ADAFLRPALK RPNLFLVSNA LVERVTLHDG AATGVEYRAR
241 GQLVRASATR EVIVSAGAVN SPQLLQLSGL GPAALLQRHG IAVARDLPQV GQGLQDHLGI
301 SYQFTATQPT LNNRLGNWPG KLAAGLRYLL TRGGPLSVPI NQIGGFVPST IGGRADMQVY
361 CNPMSYSVRP DGKPDVAPMA GFLICAQPCR PSSRGAVTIR SADPRTPPDI RPNSLSTNED
421 CAMAIAAGRI AQRLARTPAI RAVTREGPDI AAMSDGDLLA DFRQRAGSVY HASCTCRMGS
481 SARDSVLDAR LRVHGVAGLR VIDASSFPNV TSGNTNAPVM MLAARGAEMI LQDH
SEQDB ID: 3101377HJY
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKLPNPTWLR SFEAAARLGS FSAAADELGL TPAAVSQQMR LLEKQLKTTL FERLPRGVAL
61 TDMGKAYAQP VRKGLDDIQV ATAGLFGTTR RRQIKVRASI SCAALVIAPR LHGFLASHPD
121 IDVDLSTFVW ANRFQDGISD IDIRFGFGDW TDGRLTHLGH EFAIPVCSPD YLTGFGAAPR
181 LDHLAALHIF TIHGSESDWP RLFAQMGLAP PVAARVTRFD SSLMALQAIS AGSGLAIVLE
241 SFAQPFLERG AAVAPVPDRL AIRPAHFLVE RDGGERRDEV RAFADWICTL FQGPRP
SEQDB ID: 3101377HK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLSALSLCL TLWAAIAGAF EVEEHALFGA ADGRVLRILS TTDTHILRPL IDSFLDARPG
61 VAVDYLSVSS AEVMRAIVDE GERFDLVLSS AMDLQIKLAN DGYTRPHRSA WTPLVPDWGN
121 WRDHVFAFSQ ETASVVLSRA AFADQDLPRT RQDLIDLLRS DPDRFQGRVG TYDVAVSGLG
181 YLFATQDART AESYWRLMEV LGGLQVKLYC CSGEMIEAVA EGRIDMAYNV LGSYARARTD
241 LAESILVIEP EEYTNMMMRT AVIMRDAAEP DLAGAFADHL IAAAWSDPPA PDYPFPGPPA
301 TDRPEGASLR PISLGPGLLV FLDRLKRQRF LEEWRNAVQQ E
SEQDB ID: 3101377HKA
Reference:
3101377
Name: carnitinyl-CoA dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: caiD-2, Linkage: megaplasmid
Sequence:
1 MSDSPVRTRR DGAIFEVTLD RPKANAIDLV TSRIMGEVFR EFRDDTDLRV AILTGGGEKF
61 FCPGWDLKAA ADGDAVDGDY GVGGFGGLQE LRDMNKPVIA AVNGIACGGG LELALSADMI
121 IAADHATFAL PEIRSGTVAD AASVKLPKRI PYHIAMELLL TGRWFDADEA HRWGLVNEIV
181 PGTQLMERAW DLARLLASGP PLVYAAIKEI VREAEDAKFQ DTMNKITKRQ LRTVDVLYSS
241 DDQLEGARAF AEKRDPVWKG R
SEQDB ID: 3101377HKB
Reference:
3101377
Name: ThiJ/PfpI family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRKLAAVLFE GFEMLDYFGP LEMFAMFPDE IEIVAVAEHA APVRASGGPA VMPDRVFADG
61 ADYDLLLVPG GRGTRREVDN PVLLDWHVAA SARAELVTSV CTGSALLARA GLLDGRAATT
121 NKLAFDWVAS QSDKVDWRAS ARWVADGRFL TASGVSAGID MSLDALARLL GPEAAEKAAH
181 WAEYVANRDP ENDPFARMDK M
SEQDB ID: 3101377HKC
Reference:
3101377
Name: acyl-CoA synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSKGLSRMFQ PRSIAVIGGG AWCRQVIVQC RRMGYGGAIW PVHPKAVEVE GYPAFARLED
61 LPGAPDAAFI GINRHATIEA VALLSAMGAG GAVCFASGFS EALAEDETGG DLQAALVAAA
121 GEMPILGPNC YGFVNALDGA LLWPDQHGCS RVERGVAILT QSSNIAINLT MQQRGLPIAY
181 VVTCGNMAQT GQARIAMALL DDPRVTAIGL HIEGFGDLRD WEALAAKAHA RGVPLVALKV
241 GASEQAQQAT VSHTASLAGS DAGAQALLDR LGIAPLRALP DLLETLKLLH CNGPLTGVDI
301 ASISCSGGEA SLIADMSVGS ALRFPALTAR QRQALRAALG PMVALSNPLD YHTYIWRDAQ
361 AMAAAWSGMT GDGIALTFSI VDYPVTDPAD WTCATQAALK VRAETGAPFA VVATLPELMP
421 ADVAAELMAG GVVPLMGLRE ALAAAEAAAS LHAPDPVPVC LPGQEDATQL LDEGAAKAAL
481 AAHGLEVPRN RTARADEAAQ AVEGMCGPFA VKGVGLAHKS EHGAVRLGVP AADVARVAAE
541 IGTPEVLIEE MVSDAVAELL IGVIRDPAHG FVLTLGAGGV LTELMRDTVS LLVPAARADI
601 AAALQRLRIA PLLAGYRGKP GADMDAILRA VEAVQDYVLA HAGTLGEVEI NPLLVAPDRA
661 VAVDALIRLE
SEQDB ID: 3101377HKD
Reference:
3101377
Name: acyl-CoA dehydrogenase, Class: EC1.3.99.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: acdA-3, Linkage: megaplasmid
Sequence:
1 MHFGLSEEQE MIVSTVRSFV EKEIYPHETE VERTGEVPKE IADEIKRKTI ELGFYACNFP
61 EEVGGAGLSH LEFALVEREL GRGSMALNHF FGRPQNILMA CEGEQKERYL LPAVRGERMD
121 ALAMTEPGAG SDVRGMKCSA VRDGGDWVVN GTKHFISGAD HADFIIVFIA TGEDMTPKGP
181 KKRITAFLVD RGTPGFTIRD GYRSVSHRGY KNMVLEFDDC RLPDAQVLGE VDGGFAVMNE
241 WLYATRITVA TMSVGRARRV FDYALNYAAE REQFGQAIGK FQGVSFQIAD MITEIDAADW
301 LTLAAAWRLD QGLPANREIA SAKVYASEML ARVTDTTLQI FGGMGLMDDF PIERFWRDAR
361 VERIWDGTSE IQRHIISRDL LRPLGA
SEQDB ID: 3101377HKE
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLLFDNFSNH CLANTVEPMR AANMLSRRPL YAWRFLTPDG APVHSSSGLQ VAPHDRLAAG
61 RGAMLLVMPS YGFRTLDGWP TLRALRAAAQ RYPVLAGLDT GSWLLARAGL LDGHRATIHW
121 EELTRFAETF PQVETLRERF VLDGPRITCS GAMAAFDLIL HLIGRDHGQL LALEVAQLFM
181 TRDSARSHDA PAGGGTRQVN RAVMVMQDTL EQPLPIAEIA RRAGCTQKTL ETRMRAAFDA
241 TPQTVYRRLR LNLARKLVTE TDLPVSEIAT RCGYDNASAL TRAFRARFGQ PPRGLRANG
SEQDB ID: 3101377HKF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRKPDPYDA AEGIAGPYDS DPVEEDDLWF LPAQEPGEDE VDPLFPTPRA AQPLLFDPLE
61 WRAAQDALSA DLADLALGFG ALDERLRAGP RQWVQRLALL EVADLGWWAG DRIGAERLAL
121 WTGLRLGATS EDVQALARAG WAVRRLSGGP APDTGGWAEG LAGFLDRSGA EGDTVPETVA
181 DLGDVMAAAA ALHPATRAAM LFHCWIMLGQ GPSAGLEAAV MAARHGAAMG RGGALFLPLA
241 LSGPGALRGA GAAEQKLTAW LRGAAQAVTA ALLHLDRVAA WSARAIEKTS DLSGRTPPAL
301 IEVLTAWPMV TAPLAEAQSG ASRAAVQRNL DLFARRGLVR EVTGQGRYRV WTAAV
SEQDB ID: 3101377HKG
Reference:
3101377
Name: branched-chain AA aminotransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTTPQPETAP RTTHDAEADA RNRDILIYVD GDLVHRDEAK VSVYDSGFML GDGMWEGMRL
61 YDGEWAFFDA HMDRLFNSCK AVALEIGKTP EEIRAILDRT AAANGMTGDA HCRLMITRGR
121 KAKPFQHPGL SKWGPTIVAI VEHSVPSERV QGTGIRLASV PQVRGLPHSQ DPKFNSHSKL
181 NCVIACLQAE QAGADEALML DPHGFVNTTN ACNFFIVRRG EVWTSTGDYC MNGVTRANVI
241 TLCREAGIPV FEKNFSLYEA YGADEAFLTG TFGAQTPVAE IDGRVIGAGG GAGPVTRRLR
301 ALYKAMVAQN VAEQKARRG
SEQDB ID: 3101377HKH
Reference:
3101377
Name: phosphatidylserine decarboxylase, Class: EC4.1.1.65
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: psd, Linkage: megaplasmid
Sequence:
1 MKMRDTFLKP MHPEGRKFVG IFAAITVILF LIWSVLGWIG VGLTVWCYYF FRDPERVTPA
61 REGLIVSPAD GIVSMIEKSV PPAELGMPDQ ALTRISVFMS VFNCHVNRAP IAGRIAAIAY
121 RPGKFFNASL DKASADNERN SLCIEMADGR QIAVVQIAGL VARRIVCFSS TGDTLRTGER
181 FGLIRFGSRL DVYLPEGVEP MVDLGQTMIA GETVLADLQ
SEQDB ID: 3101377HKJ
Reference:
3101377
Name: CDP-diacylglycerol-Ser O-phosphatidyltransferase, Class: EC2.7.8.8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pssA, Linkage: megaplasmid
Sequence:
1 MTDPLDNEEQ SKVRLIHLLP NLLTIAAICA GLTAIRFGYE GNFEMAVRLV LVACVLDGLD
61 GRVARFLNHS TAVGAELDSL ADFVNFGVAP VLILHSWALQ DFSGIGWIAV LFYSICCVLR
121 LARFNVSGRL DPKSAPSDFF VGVPAPAGAL LVLLPLVVSF AVSDMPVAPP AIVALHICVI
181 GILMISRMPT YSFKNMAIDR SNAKFFLLGA TILSAALLTY LWITLTFIIL AYAGCLVWVY
241 RSSRKLKKTK G
SEQDB ID: 3101377HKK
Reference:
3101377
Name: phosphatidylethanolamine N-methyltransferase, Class: EC2.1.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pmtA, Linkage: megaplasmid
Sequence:
1 MELNAVKSSY ARWAPIYDKT FGAITNVGRH AAVDYINAHD ATELLEVGVG TGLSLPNYRP
61 GLKVTGIDFS EEMLAKARAK VESLGLGHVQ SLRQMDARDL DFADASFDVV AAMHIISVVP
121 EPERVMAEMA RVCKPGGLIV ITNHFARDSG MLARVERFAA PFANLLGWHP DFEISSVLKQ
181 PDLTVIERKS LPPMGMMTFL VLQKCE
SEQDB ID: 3101377HKL
Reference:
3101377
Name: hydantoin racemase, Class: EC5.1.99.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKILVVNPNT TASMTNKIAR AARAVARPDT EIVAATSQAG PASIQGFLDV ATCVPGLLEE
61 VARHKDVDAI VIACFDDTGL DAVRTLVSVP VLGIGEAAYH AASMIANKFS VITTLSRSVP
121 GLENNLMRYG LAQKCARVRA TDIPVLKLEE GDPATLSKIR SEISASIAQD NTEAIVLGCA
181 GMADLMAQLS AEFGLPVIDG VAAGVTFAEA LVNNRLGTSK IGAYSRS
SEQDB ID: 3101377HKM
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: livF-2, Linkage: megaplasmid
Sequence:
1 MTAMLDFKDV ELYYDHVYAL KGVSLHVNKG ETVALIGANG AGKSSILRAI TGLAKPKSGS
61 VTFEQARVDG TDPSAIVKRG IAMVPEGRRV FPFMSVKDNL LMGAFTRSDK ADIQKTLDNI
121 LTRFPRLKER YTQAAGTLSG GEQQMMVIGR ALMAKPKLLL LDEPSLGIAP KLVQDIARSI
181 VAINRDEGVS VLLVEQNSRM ALSISHRAYA MATGNVVIEG NSKELLHDDR IKAAYLGGEV
SEQDB ID: 3101377HKN
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: livG, Linkage: megaplasmid
Sequence:
1 MSPLLQVRNV TKKYGGLTAN NDVSFDVAEN EILSVIGPNG AGKSTLFKMI SSFTSTTSGE
61 VLYRGERISN LRPHIVARKG VVRTFQETTI FKSMTVRESV VVAQHLRAKA SLAGYFLGSK
121 AAKDDVSAFG KYADELLEFL GMSEIANELA SNLPQGNLRA LGIAIGLATD PRVLLLDEPF
181 AGMNHDETMN MVNLVRAVRD DRGVTVMLVE HDMPAVMTIS DRIVVLNFGE KIAEGTPAEI
241 QNNEKVIEAY LGSVDDEIGM
SEQDB ID: 3101377HKP
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLGFSSKQLI GTGIFLFAIF IGVPLVIGAT GRWDFYFTLT SVALLAIASA GVWLTFYIGR
61 INIGQGAFAL IGAYVSAILV VKAGWSFWIT LPAAGLFAAI VAILVGLPIL RLRGVYFAMI
121 TLVLTQVVTL TALALPITNG AKGISNIPLP SGLSILGIPL IPDFGAMENT KLAFYLTACI
181 LMVATYAALY RLVNSRLGHL CRSMQQNEEL ASSIGVNIAY IRIVIFAISS FFGGIGGAMF
241 GAIAQSVYPS TFVVADSVNF MLNCFLGGLG YVFGPMLGTL VLYFGWDLLF EIGKYQMLVY
301 SMILIAVIRF LPNGLLSVRF DKGDKK
SEQDB ID: 3101377HKQ
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEQILANGVY LGSQYAMIAL GLTLIFALMN VLNFAHGQMY VIGGFVTYTF YGQWGIPFVL
61 ALVMSCVTLA ILGALIEKFL FAPVIKGSAR EESTMLLAAG IAFFLDALIL LIFGEKQRGV
121 PKIVDGVFNW DFRIIMPYDR ILICVLAILS IVAFIGLMQY TKTGRALRAL AQDRTAAQLM
181 GVNVDRYSMI GFALGAMLAG LVGGLLVTIT GVNLGMGGPT SIKAFMMVMI GGAGVISGAI
241 WGGIILGFME AIGLALLYQY GDITYLLIFV SLMIFLAIRP QGLMGKPWG
SEQDB ID: 3101377HKR
Reference:
3101377
Name: branched-chain AA ABC transporter, Subunit: periplasmic branched-chain amino ac
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQRRSLMKAA MTAATLTAFG TTAALAENPV LKIGFVGVTS GPAAAWGISN QRSMETRAAW
61 INETGGYTIG GTTYDIEIVS FDDQKDPKRA IAGMERMAQE GIHYVVGPNV DDGAAAVRPV
121 AEANGIMYFP YAFPKELYQA PASNAVLGMV ANYQSGPAIY KYLMEKEGVE TVAFIAANES
181 DPLSQRDGGV AAAEALGLKV VSSSVTYQVD TTDFTPVLTP VMRTQPDLLV LSGVSPANAP
241 QLIRSARELG FQGLISTETA QDAGVLAEGA GDLANGFISV GGASTPELAS PMMNEFVKRY
301 TEMFGEYNDE SNTKVYALEY ILETLKANPA AIEDVAAFQA TMDTFEAPNP YMNGDATLRY
361 VGMTSFGQRR QVAVPLVVNV YQDGAFETLF VAAVD
SEQDB ID: 3101377HKT
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPSNPQQSSR ATPDRPSGSD ESVIVERIYK AVMEQRLAPK TKLSEARLCE TFGVGRMRVR
61 RALLLLSSQG IIELQSNRGA YVACPDTAEA NEVFAARMLI EPPLVRQLAQ SSGNIDLTIL
121 TEHIALEDAA RERKERTEII RLSGEFHTKL AQATGNKFIF RMMRELVTRT SLIVGLFGSS
181 ENASCPDDEH NNILKAIQSQ DPEMAETLLI SHLNHIQNGL DMDMRQVPQD DLAAILGSD
SEQDB ID: 3101377HKU
Reference:
3101377
Name: site-specific recombinase, Isotype: phage integrase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKPVRPQPAT PPALSENDRQ ALNDLYVRGT PENTLRAYER DLLYLTAWKQ LSFGAPLAWP
61 EQHECALRFI LDHSRDLGDA TGPAREVAEA LIARGLRRSL ACPAPATLNR RIASWQAFHR
121 MKNLDSPFDS PLLKQARAKA RRAAARPTAP KSRNPITRPV LEQLLATCRG SRRDCRDRAL
181 LMLGWASGGR RRSEIASLRV EDVSLRDFAA DGIAWLMLVE TKTTRRGATP RLVLKGRAAQ
241 ALVHWLEVSG IEDGPLFRPV SKSDRVLTRR LTPDAIYQIV RHRLQLAGLP QDFASPHGLR
301 SGFLTQAALD GAPIQAAMRL SLHRSVAQAQ RYYDDVEIVE NPATDLLG
SEQDB ID: 3101377HKV
Reference:
3101377
Name: replication protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRKRRIFDI DMPAMEDIPV GKVPDKVLDK HRRGPMATAI SENADALRDR QETEDRIRAE
61 NDQLAHELVR LKKEGLITDL VPLDAVHAER LTRDRAAGPD PELDELKTSI REIGLSNPIR
121 VEKRADGGYE LVQGMRRLSA YRALYEETGD ERFARIPAGI LANAPTDDQY RRMVDENLIR
181 KDISFAEMGA LARAYAEDPA NDCADVDKAV SVLFKSASYT KRSYIRAFAS LLMMLGKSLE
241 HPNEIPRNVG VDLKRKLDGD PGLVRAVSSA LLAQPGRSAA DEVAILRGFA EGAGVPEPQA
301 RTAAPSGDKT RRAKTTFQIS RPSGIAKCSA SNGRIDLRYN LDFTRIDRQK LEQAVAKLID
361 SLQED
SEQDB ID: 3101377HKW
Reference:
3101377
Name: replication protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: repA, Linkage: megaplasmid
Sequence:
1 MYTHEDLSHL RNQSLKLQGW IRQQTFSPEM EKTLRRFSSW EVSELIFNVN QSTFRGKLVA
61 DPTLPGGEVE PDGRQRWFSL EEVNELRRRL KINRKSLMPP RPAGKRAIRA AVANFKGGAG
121 KSTVALHLAH AAALDGYRVL VVDFDPQATL SHSMGLTDVA EDYTVWGIMA RDLIRETERM
181 NNRAAAAESG TTLPRRQLPA SITGMGLGDL RVGDFIKPSS WSTIDAIPSC ANAAFVEFAS
241 AQYRHLNPEW SFFAAVSRYL DQIPDDAYDL ILFDCPPAIG YQSMNAVFAA DMLYIPSGPG
301 YWEYDSTTSF IGQLAEALED LSHGFDGVLP TGKIGLPKTF AEIRFILTRY EPGNALHQAM
361 YEAFRKVFGH HVTDHPVEMT RAVEQSGRFL NSVYEMDYRE MTRETWRRAR GTFDNAYREF
421 REVMLSAWSK LEDDA
SEQDB ID: 3101377HKX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQIAKPVGRN ASALKYDILS ALAVHALAGD KHRQRLILRL SALITTRYNW QRNELSMGRD
61 EIARLWSVDE RTVKREMARL RTLGWVTVKR PGVRGRVSVY ELDLKQMLLD TRTSWAVIGP
121 DFEARLDETP QAETAGNVVP LHVPPPLGES SDDPVWAQVQ AALYGRDPEL WSSWFQHLSE
181 VERGGGRAVL MAPSRFMADY IAAQWSGRLL AAYSRIDPSI RSIRIEAAG
SEQDB ID: 3101377HKY
Reference:
3101377
Name: S1 RNA-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDRIARTIAA EINARPEQVD AAVKLLDEGA TVPFVARYRK EATGGLDDTQ LRTLADRLTY
61 LRELEARRET ILGSIRDQGK LTDELSLMIA RAETKAQLED IYLPYKPKRR TKAMIARENG
121 LEPLAEAILA DRKAEPETLA QAYLSEGVPT TKDALNGARD IVAERLTEDA TLLGELRAFL
181 HREAMLSAKV IEGQEQAGAK FSDYFAHSEK WATTPSHRAL AMLRAQKEGV VTLDIAPDAE
241 GAARAETMVA SRLETRGSGP GDAWLRKVAG WTWRVKLSLS MMVDLMGDLR ARAQEEAIQV
301 FARNLKDLLF AAPAGARPTL GLDPGIRTGV KAAVVDATGK LVATDTLYPF QPKNDLRGAQ
361 ASIARLIAQH GIELIAIGNG TASRETERMV ADTLKLLPSS VKAPTKVVVS EAGASVYSAS
421 ELAAREFPGL DVSLRGAVSI ARRLQDPLAE LVKIEPKSIG VGQYQHDVDQ HRLGQMLEAV
481 IEDVVNAVGV DLNTASAPLL AHVSGLGPGL AEAIVAHRDM NGAFAARRDL LKVARLGPRA
541 FEQCAGFLRI RDGKEPLDAS AVHPEAYEVA RRIVGACGRD IRQIMGHEGA LKGLRAEQFV
601 TESFGLPTVR DILAELEKPG RDPRPSFVTA SFADGVEDIT DLRPGMVLEG TVTNVAAFGA
661 FVDIGVHQDG LVHVSQLADR FVKDPHEVVK TGQVIKVTVT EIDVPRKRIG LSMRKDGGAS
721 ARQEKPARSG GPRDRSPRGP MQSGPKGGGG SGALGAALQD ALRKR
SEQDB ID: 3101377HL
Reference:
3101377
Name: oxidoreductase, Isotype: GMC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFDYVIVGG GSAGSALAAR LSEDPGRTVC LIEAGGRGDS LLIRAPAAVV AMLPGRPRIN
61 NWAYETVPQP GLNGRRGYQP RGKALGGSSA INAMLYVRGH RRDYDEWAEL GCDGWSWDEV
121 LPYFRKSENN QRGADPMHGG SGPLQVSDQQ SPRPISRAFV EAGAAMQIRQ SDDFNTGDNE
181 GIGLYQVTQF HKPGHQGERC SAALAYLYPV MGRPNLTVIT RAHAKQVLFE GKRAIGVRYR
241 KAGQSHTARA ACEVILCGGA FNSPQMLQLS GVGRPEDIAP HGIAMVHELP GVGQNLQDHL
301 DFTLAYKSRD TDNFGLGLAG AVNLLRHARA WRRDGSGMIA TPFAEGGAFF KTDPGLERPD
361 IQLHFVISIV DDHARKLHMG YGFSCHVCVL RPGSRGTVSL ASADPLAAPV IDPQFLSDPA
421 DLSALMKGVR KTREMMRSQP LSGYIHKELF IDGEPDDAGL EQHIRARADT IYHPVGTCRM
481 GRDEMAVVDP QLRVHGVEGL RVVDASVMPR LIGGNTNAPT IMIAEKAADM IRAAAQA
SEQDB ID: 3101377HLA
Reference:
3101377
Name: sulfoacetaldehyde acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTHINGGEAV YRVLKANGID TVFGLLGGSM LELYDAMHKG REIAYVGARD ERAAGHMADA
61 WARMTGKPGV VLGAQAGPGV VNIVTAVAEA HLAYSPMVVI AGAITRADQA KDTFQEVDQV
121 ALFAPICKRS VMVTDPSRLA PMLEDAIRLA NTGRRGPVVL HVPRDLFAEE IPAIYPKPLA
181 LARPGPAAPA DVSAIAALLA GAVRPVIFAG GGFKWGAGRD ALTALAETLE VPVVASTGHA
241 DVMRHGHPWF AGQAGPRGNR VASRLTKEAD VMVVLGARLG FNSTFHSNDY VGAETRIAHV
301 DVEGAAVGRY FPAEIAAQGD ARLTAEALTE AGERPNCDAW RERFRADMDS LLAERAEEAL
361 VETLPMHPRR ALGELRNTLP EDAIVTLDTG NTCLQAADRL AHYAPMSLIT PLDFGLVGFG
421 LAAAIGAKAA APERPVVAIM GDGAVGYTMI EIQTAISHKL PITIVVLDNE AWGAEKAYQQ
481 EFYGGRLLGA EIESPRFDKF AELCGGKGIW VDGPGGMGSA LQEAIASGQT TVIQAKIDPG
541 ALMTLRKDLF KAPQKEAKA
SEQDB ID: 3101377HLB
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDTTRVTRV AIIGGGIMGV AAQFQLAENG WTDTILFEKA ELTSGSTWHA AGQIAHAVGS
61 RIAGWINKTS IETYKRVEKE TGQSIGWHEV GGFRIATTDD EVDWMKSIMG VGRLLDLPMD
121 LVGPDEVAKG NPFYKVDNVK AAVQTYEDGH IDPSGVTMAL AAATRARGAK IERRNQVLGA
181 SRKGDMWCLR TEKGDVLAEH VVIAAGSYAN QVGEWFGLKI PSVSCLHHYL VTDRVPEFEG
241 RPELPVMRDN AFGGYIRQEQ KSGLIGIYEG HVCPTVWEMP KGAPWAAENE LFEADYDSIG
301 DFLMIAFDKM PILAELGIKR VVRGAITHTP DGGMLVGPSG APNVWLSCGS SIGLAWGGGA
361 GKVLADWMVH GETSINTRSL DPRRYGDFAS DHYIVERTKD EFMRRHDTPC PGKQFHSLRP
421 LNRHQLYDRL AAKGAVFGEI AGWERPRYFG DVGEVEQIGW GHQSWHENAL AEAQATRATA
481 GVIDLCAFAQ FEITGTDAGK LLNRLSANRI PHKDGRMSLN HLLTEKGRFE TEITIWRINE
541 NRYFTGSPIT RANPDFAWIK SHIRPGEDVQ MVNRSADWGM LAMSGPASRR ILSELTDADL
601 SNAAFPWLSG QEITVAGVPC YALRVSFVGE LGWELHALLN RIPELYDALF DVGSAHGLTD
661 LGSYAFNGMR MEKAYRASGE LTTDIGPFDV GLERFVVTEG RDFIGKEALL QRDPEWELFY
721 AELQSDDIDI HGGEPVFFRD QIVGLTTSGG YGYTLGKSLG WLFVRKGTPR ADIAVRILNE
781 TYPVTIHDAP LFDPDNLRPK AED
SEQDB ID: 3101377HLC
Reference:
3101377
Name: FAD-dependent oxidoreductase/aminomethyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTLPSHARTV VIGGGVIGCS IAYHLAREGR KDIVVLERSK LTSGTTWHAA GLVRRLRPSA
61 TLTRLINYSI DLYGELERET GQATGWTQTG SLTLATNTDR LTNIKRQVSL GRAFGLEAEV
121 VDANRAQELW PLIEVDDVIG AVWSPADGRV NPSDVALALS KGAKARGVHL FEDTAVTGLK
181 KKGGRISAVE VGEHVIEAEE VVIACGLWSR EVAAMAGAHM PLYACEHYYI LTKPLAEVQA
241 LGPGAHLPTL NDQDAYLYAR DDVEGLLVGS FEPHAKGIST KDLPANFSFD LLDEDWDHFM
301 PMMENALRRI PALETAEVRK LLNGPESFTL DSQFMLGESP EVPGLFLMGG MNSTGIALAG
361 GAGRAMAEWI IAGEPTMELN EADIRRFSPE MDVLGALEAR IPEVLGRHYD NPYPGRAMDT
421 ARGQRRSPVH EGLVAAGARF EARGGWERAL HFGGDEAHLP LTFGIPKWRD QVAREVDACR
481 NGAAILDQSA FGKIMVQGPD ACTFLNRLCA AQMDIAEGRI AYTQILNARG GVESDLTVQR
541 HGPETYLMIV GAGEVVRDMK RMRETRGDFR VEFTDVTSGY AAIGLAGTKA REVLQATTNT
601 PVPDLKRFRF APVEIGLARG WAGRLSFTGE EGYELYVPSD MAMAAHEALV AAGATHAGLF
661 ASGSLRIESG FRAFGHELTP GTTPQEAGLG AFCAFGTGFV GQGALANAGS PKRRVVSLLF
721 DDPNAMPIHD EPIYYDGRVV GQITSAAWSY RFGRSVALAM INAPLDLIAT QDVVTGFEVE
781 IACTRFAASV SVKPAKEAF
SEQDB ID: 3101377HLD
Reference:
3101377
Name: Glu 1-semialdehyde 2,1-aminomutase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MMNQDLSTRA RASLPGGVSH ELRYRDPYPV FIDRAQGGEK WDVEGRRYID FKMGSASQML
61 GHCHPAIVEA IQKQAERSVF SADCHTREIE WAEWVNRLYP SADRTRFTAS GTESTMLALR
121 LGRAYSGKDH VLRVEGHFHG WHDHALKGAK PGSDQVPSLG IPDAINDLIH ICAADPQAME
181 SALQDDRIGT VIIEASGANY GCVPLATDTL RALHDVVRAA GVVLIFDEII TGFRWSPGGR
241 QARDGIVPDL TTLAKVVTGG LPGGAICGRA DIMELLNNAT VRNGFGPAVS HKGTFNGSPL
301 IAAAACAAMP LLANGEAQAQ ADAMAERMRD GMNAAMKRQG VAGIAYGDSS IFHVFFGRDR
361 LDGLGPAEIR GLPKPLVKAY RDGMLSRGVD MMAYTSGLTS SAHTPELIDE ALLAFDDTLS
421 EMIRDGALT
SEQDB ID: 3101377HLE
Reference:
3101377
Name: trimethylamine methyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTKTNRRRGR KDRLKQVSEP DPQPPVWPGV VGGRLKPLSP DEESLVEEAA FKLLEDLGLS
61 QAIPSMIEKV TTAGGTMTDD GRLLFPRTLV KWAIDGAQRG FTLCGQRPEN DLKIEAARVH
121 MSTGGAAPGV FDLDTHAYRD STLQDLYDAA RIVDRMDNIH HFSRPVVARD IESNALMDLN
181 TAYACLAGTS KHVSISVTEP RNVADIARLC YAVAGGEAAF RARPFLTEMV CHVVPPMRFA
241 EEACEVLELA IKAGFPVQLI SAGQAGATSP ATIAGSLVQA VAETLAGLVF ARLVDPEAKA
301 IFAPKPLVAD LRTGSMSGGG GEQAILMAGA AQMGRRWDLP TSSIAGITDA KRLDAQYGAE
361 KSLAVAMAAH AGSNIITQAA GMMSSLLGVS HAAYVTDNDM LGNILRTVRG IEATPENIAA
421 DVIAGVCRGV GHYLGEQHTF SRMKSDYFYP EIGDRRAPRD WQDNGAKRIG DVAREKTREI
481 LSGYFPSHLP DDVDRALRKD FDIRLTRAQI GRPA
SEQDB ID: 3101377HLF
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTASLTALRA FDAAARNGSF RAAAADLNVT PTAISHHIRG LEDQLGVKLF RREGRDVALT
61 DDGRRLADAT NQAFGLLDNA VQSLRRSARK AVRVSAGPIF TARWLMPRIS DFWEAHREIE
121 LEVVPAIHPG ARDRENVDIV IRWDRIADMG RDAVKLLELS PVAIASEDFV AKRGPIDHPK
181 DLLILPLLHQ RNHWGWLDWF EAMGVSLADP LYGPIFEDAN VLLRGAAEGQ GAIIGWLPLI
241 DQDLAEKRVV RVFDERIAPT HGYFVDVQHN SRARVEVRAV EDWLISQS
SEQDB ID: 3101377HLG
Reference:
3101377
Name: isocitrate dehydrogenase, Class: EC1.1.1.42
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: icd, Linkage: megaplasmid
Sequence:
1 MAEKMNSDIL YTIVDEAPEL ASASFLPIIR KFVSAADITV GTPDISLAGR IIATFPENLT
61 ADQRQSDDLA ALGELVKTPT ANVIKLPNIS ASVPQLVAAI EELQNQGYDI PSYPEAPATD
121 AEKDIRARYD AIKGSAVNPV LREGNSDRRS AKAVKSYAQK NPHSMGEWVS TSKTKVSSMP
181 GNDFYANEKS ATITAAQAGK ARIEFIGADG SVSELKKNWQ LDEGTVADAT FMSVKALGAF
241 LAEAIEDTKA DGTMFSLHMK ATMMKVSDPI IFGHAVKAWL APVFEQYGDR MAALGVNPNS
301 GLGDLLERVK GDAEILAAIE AVKADRPAMY MVDSDKGITN LHVPSDVIID ASMPAVIRAG
361 GKGWDQTGAK GDTNCVIPDR CYATVYDETI NFFKANGALD VTTAGSVANV GLMAQKAEEY
421 GSHPTTFEAP ANGTIRIVLA NGDVLHSHAV EAGDIWRACT VKKAPIENWI QLAMDRQRLT
481 GSEAIFWLDA NRAHDAQLIA YVKPVLEAAG VADKFQILAP REATAQSLKT ITAGKDSIAI
541 TGNVLRDYLT DLFPILELGT SAKMLSIVKL MQGGGLFETG AGGSAPKHVQ QLVEENHLRW
601 DSMGEFCALG ESLNFLADSR GNAKAGVLGR AAEAATQGIL DFNRSPSRKV GQPDNRDSHY
661 WFARYWAEAL AAQSDDADLA AEFAPLANAL ADGEQAILTE LAAAQGKAAD IGGYYKPSAD
721 LKAAIMRPSA TLNAIIG
SEQDB ID: 3101377HLH
Reference:
3101377
Name: amidohydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPNDTHAQTG ASGPTTLFTN ANVLTVDAEF STAQAIAIRG NRILAVGSDA EVRAAAGDDA
61 TVVDLEGKTV LPGFIDAHAH AVSGSVVDAI MDYVGMARFT TVDEVLNHIA TRAAKTPAGD
121 WLVFRNFDPA VQEGADALTF AELDPISTDH PIFILNASGH LAYANSRAFE VSGLTNDVPN
181 PPGGEFVRDA DGNLTGTIKN NVAFLQIAEN YPAMKQVNPV EGLLGLLGKW SQQGLTTVSE
241 LSLGALAQSP ADVQVMAAAA QSGRMTARLR AYPFYTLGTE TWDNAGVKQG DGNALARVAG
301 YKLVADGSNQ GFTGLQREPY LNREDRGLAY MEPDELTTTA LERAGKGWHL AIHGNGDAAI
361 DNILDTCQAL ADAGIDMARV RPRIEHCSIL HDEQIARMKA LGVSASFLIG HVHYWGVAMR
421 DQVFGLEKAQ LLDRCKSVEE AGVGFTLHSD FMVTDPNPLH MIEMAVTRRT WKEPDYVLAP
481 QERISVDSAI RAMTSEAAWQ LFSDHEIGSL EPGKLADMVI LDQDPRKVAP DEIKAIKVLE
541 TWMDGQRVFA A
SEQDB ID: 3101377HLJ
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDSKDRQIIR ALQQDGRMTN QDLAEKVSLS PSPCLRRLRN LEKSGAIRGF SVDVDPAAYG
61 LPITVFVRIR LERHNQEDVH RFETRVRQID EVLECHIMTG AMDYQLRVVV SDLDAYERFI
121 RTRIHPIGGI ASIDTSFVYS TVKKTAVFPR LG
SEQDB ID: 3101377HLK
Reference:
3101377
Name: Met gamma-lyase, Class: EC4.4.1.11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: megL, Linkage: megaplasmid
Sequence:
1 MTHAKGFASR AIHHAYDPLD HEGALTPPLH LTSTFAFETA EAGGEMFAGE RQGHIYSRIS
61 NPTLDLLEQR IATLEGAEAG LALSSGMGAI TAVLWTLLSP GDEVIVDKTL YGCTFSYMRH
121 GLAKWGVTIT HVDLTDPENL KTAISDKTRV VYFETPANPN MRLVDIAAVS EIAHGASASV
181 VVDNTYATPY LTRPIEMGAD IVLHSATKYL GGHGDVVAGL VVGGAEQISE IRLYGMKDMT
241 GAVMAPFNAM LILRGLKTLA LRMDRHCASA QVVAEWLAAH PAVGEVHFPG LTSFSQHALA
301 NQQMAQPGAM IAFELKGGMD AGRAMMNRLN MIARAVSLGD AETLIQHPAS MTHSTYTPEE
361 RAEHGISDGL VRLSVGLEEV EDILADLAQS LDAPQVQAAA
SEQDB ID: 3101377HLL
Reference:
3101377
Name: transketolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSTPQDLSHL KTIEQRILWL SHWMIHHANH IRPKVDGIKI GGHQASSASM VSIMTALYFS
61 TLRPEDRVAV KPHASPVFHA IQYLMGNLDR ARMENFRGYG GVQSYPSRTK DVDDVDFSTG
121 SVGLGVAVTA FAALVQDYIA AKDWGQGAPM GRMVALVGDA ELDEGNVYET LQEGWKNDLR
181 NCWWIIDYNR QSLDGIVREG LFERVEKIFD AFGWDVVRIK YGALQRAAFQ EPGGDALRDW
241 IDACPNQQYS ALTFMGGAVW RKRLMEDLGD QGPVSALLDR RSDDELAELM ENLGGNCVAT
301 MAETFAAIDH DRPTCFLAYT VKGWGTPIAG HKDNHGGLMN KTQFAAWQAH MGVPEGQEWE
361 PLATVADPAA LRAFLDGVPF FAKGRRRFSD ARLAVPGIEI ASDREISTQA AFGKVLDDLS
421 KGDSELAARI VTTSPDVTGT TNLGPWVNRR KLFARKDQAD AFIEHKIPST AKWEFTPKGQ
481 HIELGIAEMN LMLLLGAAGL SHSLFGKRLI PVGTVYDPFV ARGLDALNYA CYQDARFLLV
541 GTPSGVTLAP EGGAHQSIGS PLIGMSQDGL AAFEPAFADE LAVIMEWAFD YLQRDGEGDP
601 DERTWLRDET GGSVYLRLST NPIEQPGKRV DDAFRQGAID GAYWLRKPGP NAEVVIAYQG
661 AVAPEAIRAA GLLGEARRDV GVLAVTSADR LNAGWSAAQR ARARDNPAAL SHIERLMGEL
721 PPHCRLVTVI DGHPATLGWL GSVAGHRTIP LGVEHFGQTG TIGDLYRHFG IDAGAIVERV
781 EGLTSGRPGQ PARLVG
SEQDB ID: 3101377HLM
Reference:
3101377
Name: 5-carboxymethyl-2-hydroxymuconate delta-isomerase, Class: EC5.3.3.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hpcD, Linkage: megaplasmid
Sequence:
1 MPHFIVEYSG NLEDALDIGA LCEVIRATAA GIDTFPMPGI RVRAFRADHW AIADGDPKHG
61 FIDISIRLRA GRAPEVKQAA AAEVFEAVRA FVAPVMAQRS LALSLEMRDI DPDLSPKTGS
121 IRDHL
SEQDB ID: 3101377HLN
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPRFPRIDAV YETHLPVRDL DRAVTFYRDV LGLELAHRHA ARGLAFLWVG GQQTGMLGLW
61 QAGSAPMRMV LHMAFRLELE AVLAVPAALT AAGVDPLGFD GDPVSEAVVI GWMPALTVYC
121 KDPDGHSIEF LCPLPDAPDP DFGIGPWSRW RQR
SEQDB ID: 3101377HLP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDKTQSYDIF LIAPPGLEQV LAEEATACGF DEPRVVPGGV ETRGPWSEVM RANLVLRGAG
61 RVLVRIGGFP AVHLAQLDKR ARKFAWGDFL RPDRPIRVEA VSRKSKIYHA GAAKQRVERA
121 ITEELGAPIS DEAEIRLMLR IERDFCTFSI DTSGEALHKR GHKEAVGKAP MRETMAALFL
181 RQCGFDGAEP VLDPMCGSGS FVIEAAEWAA GLMPGRSRSF AFEQLAGFDA AQWQSMRNAA
241 GAGGRPESLY SGSDRNAGAI DASRANATRA GVADFCAFHQ RPVSDIRPPE GRPGLVIVNP
301 PYGARIGDQA RLRSLYGSLG KVLMDRFSGW RVGLITSEMS LARSTRLPFQ APGPVVDHGG
361 IKVRLYQSVR LR
SEQDB ID: 3101377HLQ
Reference:
3101377
Name: cyclic nucleotide-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAHEAQKAIA RNSLLIRSLP EQHVDALLSQ AVWRSYDRGE TLFLQEEKAQ AIHVVIDGWV
61 KLFRMTPTGS EAVVSVFTRG ESFGEAVALR NTPYPVSAEA VTPCEVMHIP SPVFVSLMRR
121 DPEICISILA TTFGHLHSLV AQLEQLKAQT GAQRVAEFLL ELCDCDTGAC EVTLPYDKML
181 IAGRLGMKPE SLSRAFSRLK AAGVTVKRNH AEIEDIALLR DYAESDPADS WSKS
SEQDB ID: 3101377HLR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTSRVQVVLA AIDSANSADP RLDEGRPEAQ LYGERMSAEL ARLVPDAADV LQIAARGQHV
61 ERWKLARATY PEGRAGYLAW RRAQAVHHAE VVGRLMSEAG YGAEEIETAG RMLRKQGIKR
121 DPLVQALEDV ICFVFLRWYF APFAAKHSPE KVQDIVEKTA RKMSAPARAR VLEEFDLPAD
181 LATAFAG
SEQDB ID: 3101377HLT
Reference:
3101377
Name: oxidoreductase, Isotype: 2-nitropropane dioxygenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYRNSLMERL ALDHPIIQAP MAGGGDTPEM VMAVGKAGGL GSMGVSYLQP DRISANATRV
61 REGSNAGFAV NLFAPLDPPP PPADPGPALD FVRPHYQALG ITPPGTVNGA EFDFEAQVEQ
121 VLDSGASVFS FAFGIMPEHV IERARQRGML VMGTATSVAE AQALEAAGVD AVIAQGAEAG
181 GHRAGFGADL TRAMVGTMAL VPQVVSAVGV PVVASGGITD GRGIAAALAL GASAAQMGTA
241 FLTTTEAGIP EAHKQAILDA KETDTTLTRA FSGRPARGIR NRVIADGEAM PDRLLDFPYQ
301 NALTRTLRAE AAKQQNPDFL SLWAGQGLGL ARRLSAAELM QHLIEEMRAA LASAARYG
SEQDB ID: 3101377HLU
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDIADLRFFD CVARVGNMNR AAAELNTVQS NVTARIRNLE HDLGVVLFHR HSRGVEVTAA
61 GEVLLPYARQ VMTLLGDARK AVTQDGAPEG PLSLGALETV LALHLAPVLS EFAGAHPAVD
121 LSIQTGTSRE LVEMVLAHGV EGALVCGPVA HPDLEATPVF REDLCIVARR DGRSLDQVLG
181 APGVRQLVLR LGCSYRQRLE DVLARRGVVG VRTLEFGTLD AIRAGVAAGV GITLMPRRLV
241 TRVWGEAGLA LHPLEPGEGL VTTDYIRRKS SYVSPAQQAF LDALTRDPPI RMAG
SEQDB ID: 3101377HLV
Reference:
3101377
Name: rzcC protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIESETLAES QAGTRAPEPD FEPEVLAKIE KLRDHIRDSF GKVAMAMMAI PRYRNQSLAD
61 LNHLVLDPLT RDRLAIACAP KSKGKLGDVA GFAIWASVSE PVDAKSREQT KAGTFPIRLK
121 AEDWTSGAIN WLLDVIAPDP KTTAQVIANF GQLLKGGDLR MPPIVARLVD KETLEKLGAT
181 PQAPSQTA
SEQDB ID: 3101377HLW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHYWVLGQQN TGEYSGSLNP LDGDLGHVEL VDTSIDIGIK PIMQSLVMTA GRRVKPERLP
61 RKVSHDMSAD RIDDLAMVHT YLTVSEPLRT LIEQFAPGDV QYEPFDVVGK RDGAFQQRRY
121 WFIPTVRLHA MDKDKTRPPL ADIGYFRQST PLEDQHIVFD ASVTDNRAIF ASAEYPGILF
181 VSDALVEAIE ASGLTGARFR RRFASTASEL L
SEQDB ID: 3101377HLX
Reference:
3101377
Name: methylglyoxal synthase, Class: EC4.2.3.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mgsA, Linkage: megaplasmid
Sequence:
1 MLKSKPKNIA LIAHDLKKRS LATWVFNNQT KLKRHNILAT ATTGGIIQKH CPQLRIRVTK
61 SGPLGGDQQI GAMIADDGID LLIFFTDPLS PHPHDVDVKA LSRLAVVYDV PMACSGATAD
121 LIAASGYLD
SEQDB ID: 3101377HLY
Reference:
3101377
Name: 2-dehydro-3-deoxyphosphogluconate aldolase, Class: EC4.1.2.14;EC4.1.3.16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: eda-2, Linkage: megaplasmid
Sequence:
1 MDSPRNLKSS RIIEICRLCP VIPVLEVEQI EQATPLAQAL IAGRLRVLEV TLRTDCALSA
61 ISEMSRVPNA IVGAGTLRTP EDVRAAKQAG ASFGVSPGAT DRLLDACEET GLPLLPGAAS
121 ASEVMTLLEK GYTAQKFFPA EASGGRAALR SFGGPLPLVK FCPTGGITPE KATHYLELGN
181 VMCVGGSWIA PTSLLRSGNW AEIETRARHA SQLGGQASC
SEQDB ID: 3101377HM
Reference:
3101377
Name: chemotaxis protein, Isotype: MotB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: motB
Sequence:
1 MIMKVVEMGA HTNAAPIIIK KKKSGGGDGH HGGAWKVAYA DFVTAMMAFF MLMWLLNATT
61 EKQRKGLADY FSDSIPINPV SGGGDGSFGG DSMFSENAMV TTGTGGVNRR RADADRSRGS
121 TGVDRQGGEG EPLEEFKTLE AALQGRGGES LVSEQLRKHI VTRVTDEGLI VELISTDESP
181 LFETNSDRPT QLMKELAKVV VRAADMVSNG IAVGGHIRAH PVVLARNPVW ELSTARAERT
241 RVLFEGLGMK EERIQRVTGH ADRKLTDPNP MAARNDRIEI IFLRS
SEQDB ID: 3101377HMA
Reference:
3101377
Name: 2-dehydro-3-deoxygluconokinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSNAELVCVG EPLFELSNVG PGKWNAGVGG DVSNVAVAAA RQGTRSTMLT QLGDDDFAAE
61 IRNSWAAEGV NDAYVRTLVG AETGMYFITH DAGEHKFEYR RSGSAASQVR PEDLSEGVFD
121 NAAIVHLSGI SQAISASARA TTDKAIAIAK KKGVKVSYDP NLRLKLWPLE EARKVILDTV
181 RKVDIFLPGL DDARILTGIE EPVDIVRFFA DLGAPIIALT MGDRGVLAAN DGDMRFISSP
241 KVDAVDATGA GDCFDGAFLS QLINEYSVFD AAAYAATAAA ISIQGHGAAK SIPNREAVLA
301 LQEQCRGEIW TAPEI
SEQDB ID: 3101377HMB
Reference:
3101377
Name: dihydroxy-acid dehydratase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDFQKKKLR SQDWFNNLED PEMTALYLER YLNYGLTIEE LTSGRPIIAI AQTGSDLSPC
61 NRHHVTLAQR TREAIRTAGG IALEIPVHPI QETGKRPTAM LDRNLAYLSL VETLFGYPID
121 GVVLTIGCDK TTPALLMAAA TVNIPAIALS VGPMLNGWHE GERAGSGTAI WMARQKFAAG
181 EIDAKGFLEI AAASAPSVGY CNTMGTASTM NSLAEVLGMQ LPGAAAIPAP YRERGQMAYA
241 TGLRIVEMVH EDLRPSDIMT REALENAIVL GSAIGGSTNA PIHLNAIARH LGIHLTNDDW
301 ERLGFNIPLL VNMQPAGAYL GEDFYRAGGV PAVVSELLEV GRIPHPAAKG ANGKTLAENY
361 AGIKATNSDV IRPVDRALMR NAGFLNLKGN LFDSALMKTS VIDAAFRERY LSNPEDPEAF
421 EGRAIVFDGP EDFHARIDNP ALKLDANCIL VMRGAGPKGY PGGAEVVNMR PPSYLIKQGV
481 RALPCIGDGR QSGTSGSASI LNASPEAADG GGLALLQTGD RIRVDLGKRS VNVLLSDEEM
541 ARRRERLDAA GGFPIPQSQS PWQDIFRQSV TQFSEGMVLK QATEHQDIAR KHTLRNNH
SEQDB ID: 3101377HMC
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MFVMLLGLLL TGMPLAFVTL LVALIFALGW FGPMAVPLIT SRIFSFVNSF VFVSVPMFVL
61 MASILDRSGI AKDLFDAMRV VGGRLRGGVA IQTLLVAVVL AAMSGIIGGE VVLLGLLALP
121 QMLRLGYDRR LAIGVCCAGG ALGTMIPPSI VLIIYGLTAS VSIGDLFTAS FLPGLMLASF
181 YIAYVLIRAY LNPDIAPIPE PDEIPTKEKL RLLKGLILPI LVVFMVLGSI YGGIASVTEA
241 SAMGVLGVAL SAVIRGEFNW ELLKGASLQT LSTVGMIVWI GIGATALVGV FNLMGGINFV
301 SGLIIGVSDN PTVIVLVMML ILFVLGMFLD WVGIALLTMP IFVPIIRELG LDPVWFGVVF
361 AMNMQVSFLS PPFGPAAFYL KSVAPEGISL GEIFRSLLPF IAMQVLALAI LIAFPGVTGR
421 W
SEQDB ID: 3101377HMD
Reference:
3101377
Name: TRAP dicarboxylate family transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MASDSHDFTN ERAGPTSAPP EAGTLGKIID RLGIVFAIAI LSSAAILNVE VVLRYAFNSA
61 TIWAHETVIF LTASSFVFGG LYVAARNAHI RVVLIYDLLN IKMRRLFDVV ISVICSFSCA
121 FFAWASWQSV SRAVWTPEGH IRIETTGSAW DPPTAGLIKI FLFIVLILLC VQFAVLAFNY
181 FRKRDG
SEQDB ID: 3101377HME
Reference:
3101377
Name: TRAP dicarboxylate family transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRRYISQLIA TAVFGAALAG SAAAQEYSFR FQSSDPAGNA NFILQKSWAE DVRERTGGKV
61 AIELLPVNTI VAHTETQDAV AAGIIDGHFT DTSYFAGKEP AFGLIANPVG AWSDPQQMFD
121 FMENGGGKEL MNSLVEPYGL HFIGATTPGL EAFVSKVPLD GVDDLKGIKM RAPEGMVQRV
181 FAAAGAVPVN LPGSEVFTSL DKGVIDAADY TVFSTNHEQG MHDIAKHPVY PGFHSMPLVE
241 VSMNKTTWES LPADIQATLE QSVSDFARRQ VSTLAERDAV AVAAAAADGV TVHDWSAEER
301 ARFRAIAKGE WEAAAGASDA SARVYSTLTK YLSDNGLLE
SEQDB ID: 3101377HMF
Reference:
3101377
Name: transcriptional regulator, Isotype: LacI-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRKAEKKSSI TLVDVAREAG VSAITVSRVI RTPHVVSERS RRKVEAAVEK LGYVPDAAAS
61 ALASNRTDVI GLLIPSLTNS VFSDVLRGMY DEAENHPFSI QIGNFRYRPL TEEMLIGKFL
121 RQKPAGLIVA GLDQTDISKG MLRAADCPVI QIMDYDASAE GDMIGFSHYE AGAAAARHLR
181 DRGYRRIGFL GARMDPRTQR RLAGFNDALN GTDDPQQSKR VIVTSTASSV SLGAELLREL
241 LVRAPDSDAI FCNNDDLAIG ALLEAQRRGI RIPEDFGICG FNDLEMSKQM NPGLTSIATP
301 RYEIGRLAIS TIVDALSSDK ASDPTRIDLG FTVVMRGSSA RAVD
SEQDB ID: 3101377HMG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSSNSTHTVS GTVWNQTGNA IKKVWICHFP GKGAAPQYFE TQNSLNNNQG ESFSYDGIQL
61 PSGGNDQWMV YYQDAFNNLI GTDGLFNAEI NHNNGGVTIT LDGTSVDVGQ KSSIGVEDTT
121 TYTAMQVPMV AGYLSQGGIS VSDMYIAAGL TAPTKSGIGI ALSGGGSRAM SAGIGQLQAL
181 VSMGWTKDVL AMSTVSGGGW VGIPYMFLPK EFSDDDFLGS YLPPEQLTNS NINTMGPSQI
241 GGKTNKMSAL TLFISMLHMS HAVSDDDRLY SNGTMIWQML MARYFLHPYG LVTIGHDFNP
301 SDTFAYSDAV IKNNALVNQP VIRSDPFQQA DMADPYKIAR PMMISNMMLE VQNQSATTFG
361 APVVSTPFFT GCLGAPDATT TRGIKSSVGG AAVASQGFNS MYWYLNGNQP QDQANLVISQ
421 RRNWALADCL GTSSSAIAAG VLQFMSRLSL NEIADGVMEN GPDVLEADRE MLPEDVYLEL
481 KNMYDAGDRE SLLAQLSAQD IPSFLKTPSY MYWSPAHVES SGTSKNPMDY EANFVDGGLM
541 ENTGVANLLA FTDINVVFAF INTATAMTKT GGAGIPGQNG TDIQVTEDIA ALFGYRPYSK
601 SKGWERYSST DLTKGSIQSR CLARAQIFPD GKFAEFLKGL WQATLDENNN PGVYPAVLSQ
661 LLELRANPLF GIFKSRLVTI SWHYLTPASS WNAALTPSVS STLSGISDFP NYPTIRTGLD
721 YSEVNFLSSF AGFCALPSNR KPGTSSLMEE VFMSTPDMPD LED
SEQDB ID: 3101377HMH
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDLRKLDLNL LVTFEAIYTA GNISHAAKRL NVSQPTISNA LARLRDTVGD PLFIRSGRGV
61 APTPRATGMI GPVRDALQMI QSGFGDDERF DPSTTRRNFR IVVLDMLEPI LMPPLVRAVQ
121 DYRSVTLEML PVMDFPIAEG LNDGSLDLAL TTFDPQHGDI ECEQVGAAKI VIVARKGHPR
181 IKGEMTPALV SEIGHVALIP KIRALSRVDE VLRYAKIDRH IVYMVTRFWS FPHILANSDL
241 IAMMPGDFAA HAALFYPLDI FPVPFEFPEQ HIYMIWKKRH GLDPGHTWLR EKIVEAYRES
301 EARPPGARAS VPGAPRPSDF GQTN
SEQDB ID: 3101377HMJ
Reference:
3101377
Name: HAD-superfamily hydrolase, Isotype: subfamily IB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKRFAFFDVD DTLITVKSMF DFFRYWTLEW RRESAALEAF EREFSQLRAA GESRENLNRA
61 YYRYFAGIRS EDIERAGAAW ASAWLAHPER FFIAAPVHLL RELSADGVEP VFVSGSFDAV
121 LRPIADHLSV TNILAAPLEL RADGCYTGRI GTPQTIGAGK AVAIRNFLSE QKVRADVCLA
181 VGDDISDLPM LQSVGTAVVV GEHPQLTEIA DARSWRRLPA MAE
SEQDB ID: 3101377HMK
Reference:
3101377
Name: tautomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPVIQISTFK MADQQKAEAL LHEVTAAMHR VTGVPLDKIS VFLTEVDPAR WADAGVVGTH
61 PEFQNLSRRK AYGEVSG
SEQDB ID: 3101377HML
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDEDGNFVVI GAVTTRADDG VTTRWTGAVV SAQSPVPAFG ERAPYTIIER FEPDEPLPKH
61 LGDKVLHTLP LPLPCNNYPM VFAPQQYPDA NTEDRPSYPL HRAPIPDFEP EHGRQLDRPV
121 TLAEWVRASG TLTVTLEHEA RKARFSFTFS DLLPRTLYTI MTLREHDLDP AGPTRPGPLG
181 VPNVFVTDRS GGAAFEAVLP NPFPDPSQEG GNRVINVVVL CMSSQMSHGG AIGRYGLGGD
241 IHAQLKFPQP MFHEFTTRA
SEQDB ID: 3101377HMM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTDNSMKFDT LIVVADKFAE FTVEKPAVTL SQLHAMLKLP KHLVPGAVRL LPGQGLSEGD
61 IADLIVQINA LDPAGLKWEL SLLRTLPERA DPCISHKRRS CNTLIGSPTK TAHDCYRIDL
121 CIDENCELMG DHQTGQHVQG MLLIEAARQS FIAVTEKYLL TDLEEKTYFV INAITTEFTG
181 FVFPLSAHIE YRIVSANVND RRRKYQVEMD FIQNGELRTR IGCAFTVFPH QVIAEKEAAL
241 ARDAAHCALT QVSLGANAHA A
SEQDB ID: 3101377HMN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPAELVLISR YPAKPAAAPA LAAKLAPVAR GRTLVALDDD EVVTLVPLEA ETALDGLRHS
61 LSEDAAEFAE FLSGDIRREI VSFVEAPKSC NGPLPDTPYI QLRHVEVKPE QYAAYRDWRD
121 ATIFDVVRNA DEVENFLAYH SVVSGQPGVM FVSGFSVAPD TYGEVFASER YQDIVRQAGD
181 RYITGGTGGL YTRIYADMSG RVS
SEQDB ID: 3101377HMP
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEKPENIGNT ISIIGKPSGR SLVWDDTRAF LAVARHGTLS AAAGALHIGI ATLSRRIDRM
61 EEALGVPLFV RHQSGYQLTE DGSDLIEKAE AMENAAIALS TGAKLQAQLT GKVRLATAEN
121 FASGLIIPAL PEFQARFPGL MVEIVTDITT VNVHRRDADL ALRMVKPQRG NVTLQRLGTL
181 GYGLYASEAY VQGRNPGTDR GSYETDAFIS WGEGQSHLPA AQWAERMLRG RAPALTTTSL
241 STQVTAAAAG LGLAVLPHFL AADAGLVCLN ANIGIDQPIY LVIQSDLAQS RRTRALADFL
301 AELVHSNRTR LRGY
SEQDB ID: 3101377HMQ
Reference:
3101377
Name: oxidoreductase, Isotype: aldo/keto reductase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLRRKLGQDL EVSAIGLGCM GMSEFYGPRD DEKSLDVMSR AVVLGIDFFD TADMYGPHHN
61 EELIGTFLRQ SRARIQVATK FGIVRNPGEY KRSLDNSASY ARTACEGSLR RLGVDCIDLY
121 YVHRVNTNQP IEETMEGLAA LVKEGKIARI GLCEVSAETL RRAHAVHPVT AVQTEYSLWS
181 REVENSVLPT CRALGIGFVP YSPLGRGFLT GRFQSPDEIT DGDFRASLPR FAEDAITQNR
241 SISNVIAAIA AEKGCSQAQL SLAWLLAKGD NIVPIPGTKR RRYLEENAAA ASITLTGEEI
301 ARLEASIAEL PIIGERYTAE GMKGVDA
SEQDB ID: 3101377HMR
Reference:
3101377
Name: carboxymuconolactone decarboxylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKPTHGIERD TLALAILDQL ESGASERVSN NLDAFDASAT ELILGFSFAD VLSREGIDLR
61 TREMLTVAML GAKGTAPGQL DFHMRAALNC GVTRPEIVEI IYQIAVYAGV PAAMNAITSA
121 KKAFEAANI
SEQDB ID: 3101377HMT
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSQYSQRATW RAWLAIAALG TGSFSIVTAE LAPIGLLSQI GGDLGVSTAK VGLIVTLYAW
61 IAAAAALASA IWLGGLPRRP LLVGLMAVLA ASGFATSYSG SFAGLMSARI IGAVAHGAFW
121 AMIGTLGAQI VPARQVGVAT SIIFGGVSVA SVLGVPLANL VGTSEGWRSS FLIIGWLSLA
181 VALAVLVTVP AVQGTGRIGT QALFRILSNR RFQRIFLATL FAVTAHFMAF TYVEPFLANA
241 SAIPVRAIAP LLFTFGAAGI AANMLTAALI DNWLKRIVTL SLLLAAAALG VLALFGPQLD
301 LYGAGLALIV WGGSISAILV GLQTWVLKEA GADALQASAI YVALFNGAIG LGAAIGAALL
361 GVTSLPGLFL CSALLIGIGI VSVISLAEPQ MSPAE
SEQDB ID: 3101377HMU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSPKSPPSGP AKPIATPIVS SDHLAGTDQG WQFSELEYAM TMTYNAFSRW MTHCMKAVGY
61 KDFNPLDILV LHNVNHRGKE KRLSDIAFML NVEDNHTVNY ALKKLAKADL VVGRKVGKEM
121 FYSTSDQGRQ VCEAYRDVRK ACLLDAAEAT DRDYDEISHV ARVLRSVSGL YDQASRSAAS
181 L
SEQDB ID: 3101377HMV
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSRPAAPLQG MAYALAGFAV FSLHDALIKA LGAGYSVFQI IFFATLFSFV PITVTMLADR
61 RVDTFRPNNP GLVLLRSGLM VGSMVSAFYA FSQLPLTEVY TLLFTFPLLV TALSVPLLGE
121 VVRAQRWAAV GIGLIGVLIV LRPGMSALTL GHLAALTAAV CSALATILVR KIGNSERSAV
181 LILYPMLLGA LAMGAMQPLV YRPPELVHLG MMALVGVMSF AAQHLIIQAY RAAPPAVVSP
241 IQYSQIVWAT LLGAVLFGER PDGWVALGAG IIIASGLFVV WRESRANVST RSPVLRAANP
301 RPDAGPSPAP KGPALEPDR
SEQDB ID: 3101377HMW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSNWFMIWPG SKGGGAALND RRHISGPGPH DIHRFGIAAM CAAHACPFCV SANGAMQQRR
61 HPGRRPPQDP IS
SEQDB ID: 3101377HMX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGKGAALPRR LAAGGQAQGG YKAHHGPAQH GDAIAQGLST QALGLAMISV DLRLAQVGNV
61 ELVHDLAGVQ GRRRRVE
SEQDB ID: 3101377HMY
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTANFIKEN NARQFWQPMT HPADAQANPP KIITGAAGVR IRDIDGHETI DAVGGLWNVN
61 LGYSNDAVKQ AITGQLDSLP YYSTFRGTTN DAAIELAYDL CDFFAEEGIQ RVFYTSGGSD
121 SVETALRLAR QYHKLRGQPQ RTKFLSLKKG YHGTHFGGAS VNGNNKFRTD YEPLLPGCFH
181 IPAPYTYRNP FNETDPARLA QLCAQALEDE IAFQGAETIA AFIMEPILGA GGVIPPHESF
241 MPMVREICDR NGILLIADEV ITAFGRTGAW SGSRLWGVQP DMMCTAKAIT NGYFPFGAVL
301 IGTRMTEVFE GDTSGKGAIS HGYTYSGHPV GAAAAVVCLK ETVKANVAEN AATRGEELFN
361 GLQALAAKHE MIGDVRGGHG LMAALEVVAD RASKAPAGAA MMNTVYETAY GAGVMLRVSG
421 PNIILSPPLV LSAQDVADIL SALDAGFAAL G
SEQDB ID: 3101377HN
Reference:
3101377
Name: flagellar hook protein, Isotype: FlgE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTISSSLNAG VAALSANASR LATISDNIAN SSTYGYKRVE TDFHALVNAS GRGKYTAGGV
61 RTTTQRLIDQ RGSLVSTSNS TDLAVRGRGM LPVMRSSQLA LPQQDMLLAT TGSFRTDDEG
121 YLKSEAGLVL MGWRANPDGS IPNLPRDTSD GLVPVQLSVN QLSGAPTTEM VLRMNLPATA
181 TEAGSAGDTQ PLSVEYFDNL GKSENVQIEL VPTVPATGES NEWTMILRDT ASGGAVVGEY
241 TLTFSDARTD GGTLASVTAT TGGAYDATTG SVVINVAGGP MEINIGQLGA SDGITQLSDT
301 FAPVSITKDG TAVGTMSRVE VDENGFVYAF FDNGVSRRVF QIPLVDMPNP NGLVALDSQT
361 YEPSRESGTF FLWDAGDGPT GDLVSFAREE STTDVATELT AMIQTQRAYS SSAKVIQTVD
421 EMLQETTNIK R
SEQDB ID: 3101377HNA
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDQAAIDALR TRVIPPRGHV IGGRVEGGGE TLDVISPIDG SVLTQIARGG AREVAQATAA
61 ARHAFTSRIW AGQPPAARKK VLTRLAELIE GEALDLAVQG VRDNGTEISM AFKAESGSAA
121 GTFRYYAEAL DKVYGEIAPT AGDILGLVHK EPVGVVGAIL PWNFPLMIGA WKIAPALAMG
181 NSIVVKPAES ASLSILRLAE LALEAGLPEG VFNVVTGKGS EVGEAMGLSM EIDILVFTGS
241 GAVGRRLLEY SARSNLKRCY LELGGKSPNV VFADVADLDH AAKVSAAGIF RNSGQVCVAG
301 SRLIVERSIH DEFVDALCRH ASALRVGDPL DLGSTVGAVH SVAQLEQNLR FVETALAEGA
361 DCALGGKRIL EETGGYYMQP TVMTGVTRDA TLNQQEVFGP VLAVSAFDTE GEAVDLANST
421 VYGLASGLWT SDLGRAHRMV RAIRAGVVHV NTYGGADGTV PLGGVGQSGN GHDKSLHALD
481 KYVDLKTAWM QL
SEQDB ID: 3101377HNB
Reference:
3101377
Name: aminotransferase, Isotype: class III
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTPDTQALLD RRARLLGPNV SLFYDEPVHV VRGQGVWLWD NDGNRYLDCY NNVPHVGHCH
61 PRVVEAIATQ AATLNTHTRY LHEGILDYVE ALTATFDAPL DTAILTCTGS EANDIALRMA
121 QAVTGNTGVI ATDHTYHGNT MAVSQLSRTN PPPGGYWDNM AFVPAPDSYR PLGGVPGPAH
181 ALAFAAAVQG QIEALAARGH KLACLILCPY FANEGFPTLE PGWLAPAIEA VRRAGGIVIA
241 DEVQPGFGRL GSHFWGHQKA GIQPDVVTLG KPMANGHPVG GVVTSPEIMA AFRERFRYFN
301 TFGGNPVSAA AALATLKVVQ DEGLMENARA VGDYAREGLR DLAGRHECIG DVRGSGLFFG
361 AELVLDRTDK TPATAFAKRV ANAMRQRGVL LNFLGIHYNT LKIRPPMPFS RDNADQLIET
421 LDAVLSETPF VP
SEQDB ID: 3101377HNC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTAAVARALT LWGLDGASYE LAAQRENEVW KVSDGTRHYA LRFHRPAYRS EAELTSELLW
61 VEMLGQAGMQ VPQPVRQPDG AVLGRIEGRH VSLLDWLGGR PLGKMGQLAP DLDAEAVGRM
121 IGAQMARMHD LSDRWTPPAG FQRPDWRRSG LLGADPLWGR FWEHPDLDPA QRQLMIATRE
181 RALACFEDFA PGADQGLIHA DLVVENVLVD HDRVAFIDFD DGAWGYRDFD LATVLVKFIG
241 QPDYDRLRAG LCAGYDARRR VEPGTLDFML LLRALTYPGW IMSRLDEPGG RQRSARMLDT
301 ALRLARDFME ERQR
SEQDB ID: 3101377HND
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDKTILIAG TYDTKDDELT YLAGVIAAQG GGVLSMDVSV LGDPSRPTDV SKHAVAEAGG
61 SSIQAAIDSG DENGAMQIMA RGAAAKALEL YLAGRIHGVI VLGGTMGTDL ALDLCAALPL
121 GVPKYIVSTV SFSPLLPPER IPADVQMILW AGGLYGLNSI CKASLSQAAG AVLGAARAVE
181 APHRDRPLIG MTSFGKTVLR YMVSLKPALE ARGYEVAVFH ATGMGGRAFE SLAAEGAFAA
241 VFDFAPQEVA NHLYGGLSAG ADRMTNAGRR GIPQLVAPGC YDLVDYIGWQ APPPALADRP
301 SHAHNRLLTS AVLEADERRA VARAICAKLA GASGPVALML PTGGCNEWDR PDAPLHDAEG
361 LAAFCDEIRS ACPANADLVT LDAHINDAAF SERALAIFDD WVARGLVAKG A
SEQDB ID: 3101377HNE
Reference:
3101377
Name: DNA-binding response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQNATPHILV VDDHSEIRTA VCRYLEKSGL RTTMAKDARE MDAVLATENI DLVVLDVMMP
61 GEDGLSACKR LSQSGDIPIL LLTALSEDMD RIVGLETGAD DYLAKPFNPR ELLARIRAIL
121 RRTSRTVSPA GSLAGKRVRF AQWILDSDRR VIVDSEGRET SLTSADFKLL VVMLERARMV
181 LSREQLMELT SGRVAAPLDR TIDNQISRLR RKIERDLLRP RLITTYRNGG YCLAADVEVL
241 DP
SEQDB ID: 3101377HNF
Reference:
3101377
Name: sensor His kinase, Class: EC2.7.3.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPQSLRLQIV CLVLAALAVA QGVTLVLLED QRGLAVRAAI GNEATGRAAN VVRLIERAPV
61 NLHGQIVSAA NSPLVRFEIG TDPVVDHISH DANGATEARI RALLDDDFSR EIRAELHEID
121 SSALPLPYLE PGMADQHREM MRGQMLTVEL ELSIALAGGD WLNVSTRFER PPLQWPQFAT
181 LSFGLSAAFI LLAVFWYLLA RVTGPLRLLA AAAEKLGPEQ GAPVLASAGP REVRELIQAF
241 NRMQDRIVRL VAERTRMLAA LGHDLRSPLT AMRVRSEFVE DDETRDSMIA SIEEMQHMVE
301 ETLSFARGLA DGEPLQSVEL GAFLKTLRQD MPDGFTLAQG ERIEVPLRPN AMRRALRNLI
361 ENAQRYGSEA EVSFARTRGG AVIRVCDRGP GIPEPELERV FDPFMRLETS RSRETGGHGL
421 GLSIARSILR AHGGDIVLSN RPEGGLCASL SLPRQG
SEQDB ID: 3101377HNG
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAGQGYISIQ NSARDALDPP ALEGANWQPT GPPVDNGFHG FGQRGERHMN KLGLAILAVP
61 LAGLGFLVWN MLAPAPQSHS MTPPDTSAQQ PGAPLAEVTL PTELSQNARI GQRAFEAKCA
121 VCHGQNAAGQ NGVAPPLVHP IYRPGHHADA AFLIAARNGV RAHHWKFGNM PPVEGITDGE
181 VQMITRYIRE LQQANGIE
SEQDB ID: 3101377HNH
Reference:
3101377
Name: multi-Cu oxidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAPDISEHQG KNMLSRRSFL WASGGVAAIA ALPATAIRAQ TAAPELVARV NPVQLLPSGY
61 PETSVWGYGG QAPGAEIRVT QGARIARRFV NQLPQASSVH WHGLRAENAM DGVSGLTQDA
121 VPPGESFDYD LVAEDAGTFW YHSHNRSAEQ VARGLYGPLI VDEPTPPDVD RDVTLMLDDW
181 RIDPETGQIE DDFGATHDLS HGGRLGNYIS TNGEAAYQLP VKRHERLRLR IVNAANARLF
241 TLGLQGLDGW LMAYDGMPIA TPEAIPETFT LGPGQRVDLF VDVIADAGQE ALLGRVDQRG
301 GFVQAAFPVS GGASVNRRPA PAPLPPNRAP DLAGLDEAAT LRLEMSGGAM GGMRDAIWKG
361 SSRKAGDLMA EGQFWAFNGL VGMTDTPLAS LSLGQVARMT VVNDTVFAHA MHLHGMHFRV
421 LAEDGTPGPL RDTLLTMRGE THEIVFAADN PGRWAFHCHM LSHAASGMMT WIEVTA
SEQDB ID: 3101377HNJ
Reference:
3101377
Name: cytochrome c family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKPVYLAGSA VAIIALAAVI YAARATTGPV SAGASTSVSV VSDATLAQGE TLYQENCASC
61 HGRSLEGQPN WREPDADGRL PAPPHDESGH TWHHPDSMLF DYTKFGGQAT LAALGVELES
121 GMPAFGEQLS DDQIRSILDY IKSTWPARVR AAQAERTRAD EEARNQ
SEQDB ID: 3101377HNK
Reference:
3101377
Name: 27kD outer membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRAKQIILW ASLSAMPLIA QASERSDDEI KALVYQAILE RPEIILQAVE QLQQAEEAAQ
61 AASAHAALTE NRDSLFNDPN APVLGNPEGD VTVVEFFDYN CPYCRRAMAE VQGLVDADPN
121 VRLVYREWPI LGEGSDFAAR AALAARQQGK YEAFHWALMG MSGKANETGV LRIAREVGLD
181 TEQLQRDMEA PEVTAHIAQS MALAQKLGFN GTPSFVVEDA LVPGFVEQSQ LQDAVDRARK
241 AAAK
SEQDB ID: 3101377HNL
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPPAQPPITG AKLQSRPAHR PFPSRSVTVA LLAALMVAAV LAVGWAGLEQ QSVAALLERA
61 GPLGPIAIVA LMTLAVVISP LPSAPIALAA GAAYGHALGT GLVLAGAMAG AMIAFTLARL
121 LGRAFVVRWV GPMSDAGLLG SQNFLTWTVL VSRLLPFVSF DLVSYAAGLS ALRPWRFVLA
181 TLVGIVPASF GLAHLGSALR QPAAGGAVWP VLALGLLTGL PVAWAVWRSR RAPGPAGASG
241 SPAQSTKMPR RL
SEQDB ID: 3101377HNM
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSASRILTAF GLTGALVTAG VAQAGIVYIP EGSADSVLMV ESETGQPVGR ISGVEAVHGL
61 AGAPGTPYLV AGSYSEIDPE SAAQTARPEG VSQADHNAHH AKPAKAAMPT DKGLSLVSVI
121 DAGTGEVVRR IEVPGAVHHT AVSPDGRWAM ATHPGGDGVS LIDLSTLEYA GFIATGPMPN
181 YVSFSPDNSR AYVSNAGNGT LSELDLDRRI LSRNLLAGEG PEHFALSRDG ATVFVADAEA
241 GRVLRLDIAS GAETASYGFG AELHGLDLSE REDTLFVAVK GADQVAAVDL ASGAVRLQEL
301 APAPYHLTVA DGGETLFVSS REASMVWAVD QVSLRVTAEI GIEGEGHQMV VLP
SEQDB ID: 3101377HNN
Reference:
3101377
Name: Cu-translocating P-type ATPase, Class: EC3.6.3.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEHSAHSHPT PDTPDIFTCP MHPEVRQSAP GSCPKCGMTL VSEQAAALHA QCHGQGHGPG
61 HGGTDEPGGK YDSVPAGWTG SVYTCPMHPQ VRQTDPGSCP LCGMGLELDS VASADDGPNP
121 ELVDFTRRFR VGAVLTLPLL VLTMGPYLGF PEVRTLFGER MTLWIELVLG TPVVWWCGWP
181 FMMRGWTSFR TRHLNMFSLI AMGVLAAWLF SVAAVLWPQV FPDGFRDAEG NVGVYFEAAA
241 VIVTLVLLGQ VMELRAREGT GKAIRALLDM AAKTARVIRD DGREEEIPLD AVQRGDRLRV
301 RPGDKVPVDG VVTEGRSSVD ESMITGEPVP VEKVAGDRLT GATINGTGSL VMEATRVGAD
361 TMLSQIVEMV SNAQRSRAPI QKYADQVAGM FVPAVIVIAA LAFVGWAFWG PAPALSYALV
421 AAVAVLIIAC PCALGLATPM SIMTATGRGA QAGVLIKNAE ALERFEKVDT LIVDKTGTLT
481 MGKPRLVAVL PEAGHDEGEV LRLAATLEKG SEHPLAEAIV AGAEERGVAL GTATDFEAVT
541 GKGVTGTVDG KAVALGNRKL VEDLGLDAGN LAETANTRRD EGETVMFVVV EGALAGLVAV
601 SDPVKETTPA ALKALHELGF RIIMATGDNE RTAKAVAARL GIDEIRADVL PEDKARIVRE
661 LQAEGRKVAM AGDGVNDAPA LAQADVGIAM GTGADVAIES AGITLVKGNL DGIVRARRLA
721 RATMRNIRQN LFFALIYNAS GVPVAAGLLY PFFGILISPM FAAFAMSASS ISVVLNALRL
781 RGTRI
SEQDB ID: 3101377HNP
Reference:
3101377
Name: AA permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRTPQTHEA APGGAGSISL TNAVAMGTGV MIGAGIFALT GQIAGLAGPL FPLSFVLGAV
61 VTMFSAYSYI VMSNTWPSSG GIAMILTKAY GPGAVAAAAS VLMALSMVIN ESLVARTFAT
121 YALRPFGIQD GPLVPAIGVA LIVMAYLVNV SGNRAVGLWS LVMSAVKIGG IALFGIAALW
181 ASGIENWSPA ARLSQNGITG FAASVALSIL AFKGFTTITN SGGEITDPRR NVGRTILLSI
241 AVCVVVYLLV ALAVGSALTP VQIQQARDYA LAEAAQPVLG QTGFYLTVAL AMVATASGLI
301 ASVFAVSRML TMLTEMKMIP HSHFGMPGGI RSHMLIYTVV IAGALTVLFD LGRIASLGAF
361 FYLVMDMVVH WGVWKNLRHR IGARGWVILT ALTLDAAVLA AFTLFKWRAD PTIVIVALVT
421 MLAALLAERL YLGGFVSDGG EGKHTGHR
SEQDB ID: 3101377HNQ
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHLILVLAPS LLLVSLLALV FQGLRQLRRN REQRGPRRRT PPRIGGLERN LLRQILRGAR
61 RQQAGLLLLS LSLMPPLYLS LEMPKQIVNN VLEPSAGPAE IYGVSLNQMQ MLGLFSAIYL
121 AAISLNGLGK YMLNTRKGRV AEHLLRRVRL LIYRHWRQRP PHQRQSEIVQ VLGAEVEPIG
181 GFAADLIALP VTQGGTLLTI LLFMFLQDPI LGAAALTVLP VQLVLLPYLQ RIVNRLSRER
241 IRAMRVLTRG LTGQLSPEQN GLEHIRQTAA SLRELERIRY RIHRVKFLAK ALNNFLTALT
301 PFLFYSLGGY FVIEERITLG ALIAVLAAHK DFSAPLKELF RYYQQLEDTR IRYRAVLGFL
361 IERHGAPVDG TPEPDRA
SEQDB ID: 3101377HNR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKNLLIVSLV TAISASVAIA GPSGHSEQSQ GQGHDSGGGH AGMMETGMPG QASQVNRTIK
61 VTMSETDDGE MIYTPKDFDI KKGETIRFMV TNKGELEHEF ILDTVERNAM HKEAMSQQME
121 SHQSPNAITL EPGKKGEIIW TFGNPGTFEV ACLIPGHYES GMFGKVAVN
SEQDB ID: 3101377HNT
Reference:
3101377
Name: Cu resistance protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAWALPAQAE QLIYGFQAEQ LEYRQGDSED SFVWDFDALI GTDELKLVWR SEGERVQGAG
61 GFETLENQLR LQFPVSTFFD AVVGVQASTP DGLPDRYNAV LGLKGLAPQW FEIDADLYLS
121 DNSFFRFEGE YEAMLTNRLT LTPSLELTLP LQDDPIYNQA AGGVTLEAGL RLSYDLIDRA
181 VSPYIGVNYE RSYGGTADMI RAAGDENGAF SVVFGTRLMF
SEQDB ID: 3101377HNU
Reference:
3101377
Name: Cu resistance protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: copA, Linkage: megaplasmid
Sequence:
1 MPHISAWRAA LAGATLLLSA ATAAQAGTYD ITVDKIRIDA GNFRKNGIGY NNSQTPTILR
61 FKEGEKVTLN VTNNLREDTS IHWHGLILPF DQDGVPKISF DGIKPGETFT YNFPIVQAGT
121 YWFHSHSGFQ EPDGAYGAIV IEPKGGERIR ANRDYVVQLT DTHPQRGKRI MRNLKMSADY
181 YNRSQRTLQD LIKDSGDIGL KAALEDRKMW GRMRMMPTDV EDVQGFTPMI NGESTEQNWT
241 GLFKPGEKVR LRLINSSAMA YFDVRIPGLK MTVVQADGND VKPVTVDELR ISVAETYDVI
301 VQPKENRVYS IVAESMGRTA LVRGTLAPRE GMAGPVPPLR EKPRLTMADM SGMMGSMGME
361 GHVMQSAAKP LDDMSGMDHS QMNMQPKPQP MEGMDHSQMG HAAPAPKAEA APMDHSAMTG
421 TDQPMAGMDH SQMGHAAPAP QAKAAPMDHS TMTGADKPMA GMDHSRMTGS GNSMAGMDHS
481 AMANAKGQGD PFYAPGSGLT PKAANGGKFL SYDDLTARKP LYKDRPATRE IELRLTGNME
541 RYIWSINGKK LSEAEPIVLK YGERVRFKFV NETMMSHPMH LHGMWSILDT GKGQYDPIKH
601 TVSVAPGTTV YTETEVDVTG QWAFHCHLSY HADAGMFRKV VIQGGPA
SEQDB ID: 3101377HNV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRQRAEKMWT SLALALLLTL SAFFAPLTAE IDHRGSPDMA AQHQTADAHN HTGVSSCHKI
61 AACEVPVAML PRDRVALAGA ASNVTFSLND RAPASMALEA PLPPPKVHTT GA
SEQDB ID: 3101377HNW
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctQ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLTITRLVDR AIRMILTAFC AVLLLMMVAF TVYTVVMRYV FENPPVWGDL LTVLSNIWLV
61 FFALALTVRD KDHIALDLIY TRLPLKWAFL VQQFWTLVIF ALGLVMIIWG VEAVTTMGGK
121 YWEMWYFAWE DGKLVFKPNY MPKKYAVAIV PISGFLVSLA AIASMLEDSA RLRAGTYDPA
181 KGLDSGG
SEQDB ID: 3101377HNX
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MESILLLTVL VLLILLGAPI GFTLILIPVV YILITDAAPM ILIPSQMFSA IDSVPLTAIP
61 FFMLTGELMT SATITDRLVD LSRKMIGRMR GSLAQVNVLV SMFFAGMNGS VVADTATVGS
121 LLVPAMKRAG YPPAFAAAIT AVSSTIGGII PPSIMMIVLA NASGVSVGAL FAGGIVPGIM
181 IGLLLMIINH IIAKRNGFER SAEAFSPKAI AVATYKSSLA LLIPIVLVGS VVFGIAGVVE
241 AGALTATIAL FVGLFVYRTI TWNNCKSAFV RAFRNSAMVF IIIAASGPFS WLLTSMGAIN
301 QLEDWLLSYT YNPLMFALVL VMFICLLGMV MDSAANIIVV GPVLVDVMVK AGYSDVQAAL
361 VVVVGFLIGS VTPPVGVAFF TAGAIAEVRL EKVALAMLPY LVALFALLFV LIVVPEITMY
421 LPRAFGFVN
SEQDB ID: 3101377HNY
Reference:
3101377
Name: TRAP dicarboxylate transporter, Subunit: DctP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKIESALRTF CLASAAALFA QSATGETVLK LGTVGQLGMP IGDAIAEALI PTLEEVSGGQ
61 MTIEPHYRGS LCGEQTCGEQ ANQGLLALWT SSTANFGSFG TSLAIFDLPY IFKSIEDADR
121 ISAEWLAQKQ CEIAAEEAGH VCLTVYSSGG FRQLGNALRP VHVPADMEGI KWRVTKSPIE
181 YTLIKNWGAV PVPYDWTQLY QGLQTGVVSG QYVATPWQHI AKLHEVAKYY TQIGGSWSGN
241 QLSIDKRQYD ALSDQERDWL HQAAAAFGQR VQELDREWVA AGETAIKAEI TEWYMPTDEE
301 LALWRAGAID AWINAKGTFD PETAIRVLEE QGMTDFIDQL KAAGAL
SEQDB ID: 3101377HP
Reference:
3101377
Name: flagellar hook-associated protein, Isotype: FlgK
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTISAALNSA LSGLTAASRA TGVASDNIAN ALTPGYARRS LEVAGNTIGG AGVRILGVVR
61 NSDPVLLASR RGADAAQGYA DGVSGFHTRM ARLVGNVNDP RSVPNLIAEF ESSLIAAAST
121 PSVQTRLDAV ATAASELATA LNAASNGLRE ARNDADRSIG QQVDRLNTVL QNVETLNGRI
181 QSVKLSGGDS APLLDQRQKL IDEVNTMIPV NVVARDHGSV ALFTDGGAIL LDGPAAQLSF
241 TPTLQTMPHM TLENGLLSGL ELNGMPLRLS GPTSAIRGGS LAAAFEVRDD LAIEAQQDLD
301 AVARDLIERF EAPGLDPTAA PTDAGLFTDN GARFSASAQT GLAGRLKLNA SVDPGQGGQS
361 WRLRDGLGAA VPGAVGNAQQ INAFHQALTA TRTPSDPRFG TGDMTANQVG AALLSRVAQN
421 ESLATERLTF ASASRTEMQK LELEQGVDTD VELQMLMQIE QAYAANARMI ETVGEMMDTL
481 LRL
SEQDB ID: 3101377HPA
Reference:
3101377
Name: transcriptional regulator, Isotype: gntR family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSSTTPRFLK LPEASSLSLR DQICEVVSAA IMSDALAYDR PLPSCRELAE QFSVSRNTVF
61 AAYNRLVDLE FLVSRDRSGY FVNPQMALAQ KPETDTRSAL AEPVPCPVAF PASNLMPVVN
121 PLDWNAYPYP FIYNQIDPDL FPVDGWRECT RQALGRRNLL DWASDSVESD SPRLVQQLRQ
181 RLLNTRGIYV EDDEILVTLG SQNALFLLGT IFAKFGKPIA LEDPGFFGAR NAFRLAGSEL
241 VGVPVDGDGL IPAEIPEGCQ LIFTTPSHQF PTMVTMSQTR REELLEAAER RDFLIIEDDY
301 EAEMNYVSKS SPSMRSMDRN GRVIYVGSLS KTLSPGIRLG FIVAHRDIIR EARVARGVMM
361 RHPPTIVQEI VALFFQLGHY DAHLRNIERR YKKRWHAMNN ALSRHLGMLE RTESEGGTSF
421 WLTGPEGFDA SALARRLRGK GVLIDRGQDY YLNCNDKRSF RLGFAYVPLS KLEQGIKIIA
481 DEVWALL
SEQDB ID: 3101377HPB
Reference:
3101377
Name: epoxide hydrolase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQLAASVPSN CTTCLSPIPG FASYLSGTSP WPQGVGSKST RSGKRVLKDH VASNPNVSPF
61 RFHVPDDVLE SIRSRVAAYP WHEMPDDGGW DYGTNMDYLK ELCAYWVDGF DWRAQEARLN
121 AFSNHTAKVD GIDMHFLYEP GSGPDPLPLM ISHGWPGSVA EFFEIIEPLA HPERFGGDIA
181 DAFTVIAPSL PGFAFSTRPP RPWGPRRMAG AINALMTEVL GFDGYLAQGG DWGGAICSWL
241 GFEHAPACSA IHINVLTMRH PDGPQTPEEV AWDAQFECDQ IMQNGYRTQQ ATRPQTLSYA
301 MMDSPVGVAA WLVEKFHDWS DIPVGDIESA HSKDELLTNI MIYVTTRCFN SASWIYYGRR
361 EEGGRILSPE GRRVEVPTGC AVFPREMLRW PPRSYAERLY NIQHWTEMPR GGHFAAMEQP
421 GMLVDDIRAF ARTLRR
SEQDB ID: 3101377HPC
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTLSHAEYRS IAATLEPNGM AFIDGAFCAA ADGDSFETIN PATGEILARV AHCKAADVDR
61 AVAAARRVFN DGTWSRAEPE ARKEVLLKVA DLVRKHSDEL AVLESLDTGK TITDCLAEIG
121 GEVPKFFQWY AELADKTFGK IAPTSPGALA LITREPAGIA GAVLPWNFPL VMAAWKIAPA
181 LAVGCSAVIK PAEQTPLSTI RLAELMQEAG VPAGVVNIVP GFGETAGKAI GLHNDIDTVS
241 FTGSTEVGRM FMRYSGESNL KGVGLEMGGK SPFIVLDDAV IDDALIEHAA MSAFWNGGQN
301 CSANMRQLIA TPLVEEFTAR IIARVKSFRL GDPLDPATDI GSMITKDHKD MVLSYIQSGV
361 EEGAQKVIGG NSDLPGFFIE PTVFRNLSPE MKIAREEIFG PVLGIMPVAS PQEALAIASD
421 TEYGLHATVF TRDIDRALHI ARSLPCGTVS INGFSEGDIK TPFGGYKQSG SMARDNGTEA
481 LEQYLQTKTI WIETQAG
SEQDB ID: 3101377HPD
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKLVKLETFS TEFVCFVRAT AEDGAQGWGQ VAPYYADITA QVLHRQVAPY ALGMACEDID
61 AMLDIVRDRE HKFPGSYLRR AMGGVDTALW DMHGRRAGKP VCVLIGGTPG PVRAYGSSMK
121 RDITPRDEAA RLVRLRDEQG FDAFKFRIGA EVGRDRDEWP GRTEEIVPTM RRAMGDDVAL
181 LVDANSCYSP ARAIEVGRML EQHGISHYEE PCPYWEFAQT KEVTDTLDLD ITGGEQDCLM
241 ERWQTMIADR VVDVLQPDIC YLGGLSRTLR VARMAEAAGM PITPHAANLS MVTLFTMHLL
301 RAIPNAGKYL EFSIEGLDYY PWQQGLFTSD PYRIEEGHAT VTDAPGWGVD VNPDWLARSD
361 YRVSELG
SEQDB ID: 3101377HPE
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKHAAGALLS SIRLDRTLRR SVSVQLYMAL RDMILSGALR AGERLPATRT LAKEVGVSRT
61 TVIDAIDRLV AEGMLVSRIG AGTYVSETLE NQHLTTPPSE GAGGRQPRLS YVISHAEPAY
121 ARRAWLPHKP RAFVTALPAL DAFPMAHWAR LSARHLRGGR GDVMGYGQPK GLAALRRAIA
181 THLSALKGIR CHPEQVFITS GAQHAFSLIG RLLLNPGDRV WMENPGASGA RNALLSEGAE
241 LVPVDVDGQG MVVSDGLAKA PHFRLAFVTP SHQQPLGHVM SLPRRLELLQ AAEQAQALII
301 EDDYDGEFYF GNAPRPALHS IDANGRVLYV GTFSKSLFPS LRLGFVLVPE RMVAAFDGMF
361 NTWASGPSTA TQAIVAEFMD EGHFATHIRL MRQLYKARYE ALLEAARGLP ESIGLQETTS
421 GFHTPAFLAP GVDEAEVVAQ AAQQGVTLAP LARYCLSPIP QTGLVFGFGC ATPEDIARGM
481 GILRDLPVLR
SEQDB ID: 3101377HPF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPLSKIRQTP FWHDQLGAMP ALQTQPSAKV DVLIVGAGYT GLSAALTTAR GGRSTLVMDA
61 EDPGYGCSSR NGGQISTSVK PSLEKLTAKF GPERARGIRA EGANALRWIG EFVGGEGLDC
121 DFRRVGRFHA AHTPGHYEEL VRDAETLRQQ EGIESFAVPR AEQRSQLGTD AYFGGVVFSA
181 HCSLHPGKFH RELLRLAIGA GAQVVGQCRV GAITRSGSGF QVETAKGVVE ARDVIVATNG
241 YTTALTPWLQ RRVIPIGSYI IATEELPEAT IDELFPGDRI ASDTCKVVYY YRASPDRRRV
301 LFGGRVSASE TTALAGAARL RHDMCRIFPQ LEGVALSHAW SGTVAYSFDE LAHTGVQEGI
361 HFAMGYCGSG VSMAPYLGMR AGQKVLGLAE GQTAFDGLPF PTRPLYRGKP WFLPAAVAWY
421 RWKDQRQFRK ALQMT
SEQDB ID: 3101377HPG
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: periplasmic substrate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKTRTILTIT AAVMATGAFA QGKSVTIASW GGSYQEAQSK ALFEPAAANT GIEVKQETYG
61 GMSDVRLQVS SGQVTLDIVA SGSGSAARAA AEGLLEKLDY NVIDVSTFYP GLYTDYCIGG
121 DVFSTVYAWN TNTYGENGPQ SWADFWDVEK FPGSRAYRGK VAGALEGALM ADGVAPADVY
181 SVLDSEEGIE RAIDKIRELK PHISVFWTSG AQHAQLMKDG EVDMTTGWNG RFDNAAKDGA
241 KVAYSFNQAL LDYDCFAVPK GAPNRDTAMM FLNEISKPEY QDDLPKYITY GPTNKAAYET
301 GEITADVAAG LPSSPANAAM QLPVSLDWYA KWETIAAEMY QEMLTE
SEQDB ID: 3101377HPH
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRGFVLTSTT NEALPISVKN VTKTYGPVHA LNDVSLEVRS GEFLTLLGPS GSGKTTLLMV
61 LAGFTRPDCG SLKFGDREVI RTPPHLRDVG MTFQSYALFP HMTVAGNVGY PLKLRKVPKA
121 EIAQRVEAAL ETVQLGGFGE RRIDQLSGGQ RQRVAVARAI VFEPRILLMD EPLSALDKKL
181 RDQMQIELRH LHEKLGMTTV YVTHDQREAL TMSDRIAVVN HGRIMQLATP RDLYERPANR
241 FVADFIGEST FLPVSRQGDT VLFDGTPLLH DSPPPEAASL LLMIRPERVV LSREGPREGA
301 NNFAATATEV VYQGDSFLLH AALANGEQIV LRGAMRGANV TALPAVGEAL TLCLAPEDTV
361 LIDGSEA
SEQDB ID: 3101377HPJ
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MEAVRTNEAG LRRDEWLERL KLFGLGSPAI LLILVILVLP VGWLFYVSFI GADGNFSLEN
61 YERMLKRKSY ARIFQTTFEV SFLTTGLCIL IGYPLAYFIA GLPNRIANLC LITVLLPFWT
121 SLLVRTYAWL VLLQKRGLVN EWAISLGLWD EPIKIVHNMT GTLIGMVHIM LPFLILPVYG
181 AMKAIDRDLM KAASNLGASP RRAFWTVFFP LTLPGLFAGS LMVFILCLGF FVTPAVLGGG
241 KVIMVSMKIV SNIELFVNWG AASALGVVLL VSTMVILWIA SRFLNLEKMT GGGH
SEQDB ID: 3101377HPK
Reference:
3101377
Name: spermidine/putrescine ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLRWFRSPAT ETQITHGQRL WLYVIAVITM ILLVTPTLIV VPMSFSDSQY LEFPPETWST
61 RWYDHYFGSP EWMLATRTSF KAAFLTMLVA TPIGVLAAYG LHSSKIRFVR AAFVLMITPM
121 MVPVVLVAIG AFYAYVQLQI LYTITGLVLA HTVLALPLVV IVTGSALKSF DMSQEEAARS
181 LGAPRWKAFL TVTLPQIRFA VVTSALLSFL TSFDEVVVAM FVSGGDNPTL TRNMFNALRD
241 QIDPTIASIS TIMILVTTGM MVLAQLFGQQ KTKPK
SEQDB ID: 3101377HPL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIENERPALA DSLWTATANS APDCPPLVGE AEADVVIVGG GFTGLSAALH LAEAGQSVVL
61 LEAETPGWGA SGRNGGQVNP ALKPDPDDIV ARFGDDLGRR MVARWGDGGR LVFDLIARHG
121 IDCDARPVGF LRTATNTRGL AMLSEIARQW RAHGAEYDDL DAAETARLVG AEAYLGAVID
181 RRGGNIHPLN YALGLAQAAI RAGAVLHGQS RAIGFEDAGT GVSVRTELGQ VKARRALVCT
241 NAYTGPFGGA LGRSVVPVTS VQVATAPLSD NVIRAILPED HAPTDTRRLI QYYRKTADGR
301 FVMGGRGARG EAGTRRRQQE LRQAAETLFP QLGAADWVHA WGGDVAMTVD SLPGLHRLGP
361 NVMAGLGFNG RGVANATVMG TILADWVLGV PERALDFPVT PVRPIPFHFL KSAGVALTIG
421 AYRLLDRVNR
SEQDB ID: 3101377HPM
Reference:
3101377
Name: oxidoreductase, Isotype: GMC family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSDYDFIIVG AGSAGCVLAN RLSESGRFTV LLLEAGGSDL NFWIWMPIGY GKTFYKPSVN
61 WMYHTEPDPA LNGRVSYWPR GKVLGGSSSI NAMVYIRGQA QDFDEWQGLG NPGWGWDDVL
121 PYFRRAETND RGGDAFRGDN GPLHVASMER DLHPLCQDFI AAGGELQFPH NPDFNGATQE
181 GVGTYQNTAK GGLRMSAARA YLRPALRRTN LRVETGALAE RVLFEGKRAV GVSYRQNGQV
241 RTVRARREVI LSGGAINSPQ LLQLSGIGPA HLLQDKGVEV VHALDGVGRN LQDHLCIDHL
301 YRSRVPTLNT QLHPWHGKLW HGLRYVLTRR GPLSLGVNQA GGFVRSRPGL DRPNMQLFFS
361 PVSYTKAPPG KRPLMNPDPF PGFLLSAQPT RPTSRGHLEI RSGDPTEAPA IHPNYLSTET
421 DVQEMLEGAH LVRRFTETPA LARLIEAELL PGADIRSDDD LIADIRQRAG TVFHPVSTCR
481 MGPDTQRDVV DARLRVHGIG GLRVVDASIF PTLTSGNTNA PAIMVGEKGA DMILQDCGAG
541 G
SEQDB ID: 3101377HPN
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MHLKLRHLEV FHAVMEEGSV SKAADRLHLT QPAISIALSR LEDMLGFPLF HRSKGHFAPR
61 PEAYLLHLDA ELSILAVEQF ANRARLIKQG GAGLLRIGAL GASAFGLLPQ LVARFTADNP
121 KVEIDLRVRS SHQISYLVSN GQCDIGLVEA PVAAPSLEVE PFSLPCVCIF PAGSPLEAKD
181 RITPRDLVDH RLIGIQDSNQ VDRQLRAVCA EAGFEIAAPV HGFFFAVVRR MVAEGAGVAI
241 VDALNGCLPL NDGVSWRPFA PEIRYETALI MKAGAELSLP AQAFIQMIRD EMRMCAILPE
301 TVRV
SEQDB ID: 3101377HPP
Reference:
3101377
Name: Ac-CoA synthetase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKDQSSASAA LNALLAPKSI ALVGVSDRAE SYGRALDRMV SEGGFAGRVM RVNPRLAAQS
61 QGRIAASLDE LPEPPEHVVL SVATARVEAA VDAALAAGAR ALTVFSACPD AAMRERIGDK
121 VRAAGAALCG PNSMGFHNIT LGLRVTPFPV PLDLRAGGVG LIAQSGSILG ALMNNDRRLR
181 FSQAVSTGSE TVTTAADYLR WMVDQPETRV VGLFLETVRD PQGFIAAMEA AAARDIAVVI
241 LKVGRSALSA RMAISHTGAL VGDDAVLRAL VHRLGGHMAG SLDEMAAMLA LFAQGRRATA
301 PGIASIHDSG GERELMADMA EDHRLDYAAL SPATTAAIQA VLEPGIAAEN PLDAWGTGQG
361 ARETYTRALA AMMADARVGT GLYVLNWRGN YYLHEMHAQA LGDAFGQTEK PLAAVSNFSR
421 SDDAMLAGRF ADLGIPLISG MQNAMAAVRA LHDHGPVSRF RAPEPPHPRA QYWRDVLGGR
481 DWIGEAEGLA LFADFGIESP SHALVGTREE AFLAAERIGG PVVLKTAQPG LSHKSDSGGV
541 KIGLATPQAV AEAFDDLAAR FQGDILVAEM VAPGAEWSMG AINDPDFGPA VRIAPGGIFV
601 DLIDEHVLLI APFSAAEAAA AIDKLRAGKL LAGLRGRPTL AASQLAHAAA ALSRLAWDLR
661 DTLAEVEINP IIVNTQGAMA VDAVIRAHPS
SEQDB ID: 3101377HPQ
Reference:
3101377
Name: transcriptional regulator, Isotype: MerR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYTIGTLARR TGTKVQTIRY YEQIGLMPEA GRTSGGQRRY DEAALDRLAF IRHGRQLGFG
61 LDAIRELLAL NDQPGQSCSA SDSIARRQLA QVQQRLARLR ALEAELQRMI DSCDGHRGSD
121 CRVLEVLRDH SECLTDHGSE APVQS
SEQDB ID: 3101377HPR
Reference:
3101377
Name: phosphonate monoester hydrolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MGRQSNVLFI IIDQLRADCL WGALADHVEL PHLRALAQDA VSFRRHYSVT NPCGPSRASI
61 LTGQYAMNHR SVRNGTPLRH DTPNIATEMR KAGYLPLLFG YTDTSQDPRA YDANDPALKT
121 YEFPMRGFHE VTEMRLEMSY PWQSHLKNRG YAFDDYAQVY VPRPDADGTP RLNGPAMYRA
181 EDSDTAFLTD QFLANMPAWA GQNWFAHLTY IRPHPPLVAP APYNTMYDPA KLPLPARLPG
241 RDDETAEHPF FGPATRYSSP ASFVLGFPDL EPTDETIQTL RAVYLGLATE VDTHIGRVIA
301 HLKETGQYDD TLIVVTADHG EMLGDRHSWG KMTVYDAAYH TPLIIRAPGC KPGHVVEAPT
361 ESIDLMPTIL DWVGQEIPNA VDGRSLRPFL TGEAPSDWRQ YSFSELDISE PLDPTLWQQE
421 FGFGPSAGAV AILRDARFTL VEFAADLPPM LFDHQGEGEF RNVAGDPAHA ADLARLSRQM
481 LRHRMRNMDH TLSLCSITHE GARTQRRYD
SEQDB ID: 3101377HPT
Reference:
3101377
Name: cyclic nucleotide-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPLFAGLGAG ELAALARQCD LRAYEKAQMV YAEGEAARSA YVIMYGQIDS IWYDKTGREV
61 IFETRTRYDL LGLHEVADGR GRPATSVCAS RAALVHIPPG ASRRLLDHPG VQAALARNAR
121 DELRNLRDSY RRAVLFDLET RLAHYLLAQA DPGRGRPHQL RIEENQLRIA AKVQASRTRV
181 NTTIRKWRES GDIAVKDGAI LLERTSRLWD RFGPDQS
SEQDB ID: 3101377HPU
Reference:
3101377
Name: RNA polymerase sigma70 factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MNQYSTIAGP FHAIHTPEEF GRAWRQHHPE LMRRACRLAQ GNPVLGEAFL ARTTLRILEY
61 LRSSDQPIDN FQAFFAVSLR NTAQDHWRRY RRDMSIMAEL GFHQARAEDP DATLRRVIAR
121 QDLDTLCAAL SRMSCDQARL VRLRVFESLP YGEIARRLQI SEPLARKRMQ VARNALRQQI
181 EAGKSCLSRH EPGFAASIPA KAHQSLGGTH GQ
SEQDB ID: 3101377HPV
Reference:
3101377
Name: R body protein RebB-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MANDGSGTPV NSQITDAVTQ SNVEVVAISP AQSMGMLYQM ATHSAGLSLQ NSVSSQQNLN
61 QIANAVVATA VREILSIGSG GGGGGGGGGA SGGGKPKSD
SEQDB ID: 3101377HPW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAWVNLALTC GSFAGLRLAG LDAFVDFRDA ETGRGGLHRA TRGGHGHGTG QQQFGFGDDQ
61 TVLGGGGDLA GHQILGHLLE HHRLAGHHQL GHAVEILRRR LRGEPRRLPD HLVGRGHDHR
121 GGVILDLLVL EFHRLHHRRI QRRSIDRALG HRPDRRPTSL APCRSGGRRA KGQLAIGLTR
181 RWRQCHFAHG PSLGLCLSLW RGSTGLVIKG RRLGRVDQGL SLGDLILDRG DLGLGLGGGR
241 FDGALGLALD TGEDLVTNLG NRLFQLRGRV HGAREFGCLL GHDFLQKGPH LPKLSSIALG
301 LAAARGAAAS ATASTTAADA EDLAHRRGDH RIGDLV
SEQDB ID: 3101377HPX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MKILLRAFGN GGPMDAVAAT LQTLCDQARS TVDQLNIDAP LTVGDDSIWS GYNPDGHGEF
61 ELNIRLLATL HVRYNNTLTN PLAIGDVCRA CADMISAAPR HPNTAPGLAP IAQLLHQLQN
121 AQAFNKTTNR VRVKRRDILD QMPGVGGTQW YLPPEDVLGN IDRLLGYYET GDISGTTTDG
181 LGVLAMLSTV NVAAIGTLDQ IKQQLAAMVN NGLAFTSFAG MVVQMHHSLP ECMMAINLMP
241 RDLGVDNSAI TQIYSPFLTN TGLGDINNVY NEWRQARYTA LGGAGQVPDN ATQMLIVVQD
301 IFQMPNRATA AHEVALILPV TAQGMTNNAF VFGSNFYNWI VGALNTANPG PAITLEKLSS
361 AVFDQWFGPD FNPAIVNPQF GPEVVACVEQ GMALPRNQLQ NAGQYRQIVA PFVGQAEYGQ
421 VEPAQVGNLN
SEQDB ID: 3101377HPY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MYEEIEFLRS RTDELLVQVL SQWSASVMSS RDRGLPPYSS LAADLAAARD RLAAAAQAAV
61 ELDGWDYVVE CDEVSGEERV EMDVETREVK STTVRKGGRK
SEQDB ID: 3101377HQ
Reference:
3101377
Name: flagellar hook-associated protein FlgL family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAMNSLGDLA QNLMLRSYGA RIRTEINTLT RELSTGKVAD VTKRLRGDFS HLADMDRSLR
61 RLSAFATANA ETRLLASASQ TSLGIVEQTV TDLSDSLLSV SLSNQAVSHA QAGVKAQGAL
121 ETMISALNTS VGGRSLFAGV ATDQTALASA DTLMAGLRSA LTGLSTPADI MQAAQDWFDD
181 PAGFAATVYT GSDQSLGSTQ VSEDTKVSLN RRADDPAFRD AMRLASVAAL AEDPALGLSS
241 TTKTALFEQI GVGLLGARDG VVTLQAEIGD VEGRIEKAAT RNGAAKSGLE LARGELLSAD
301 PYETAIRLEA VQFQLESLYT TTVRNSRLSL VNFLR
SEQDB ID: 3101377HQA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSGFAEELPR LLAVGRNWVG RELHEDEVIG LVNWLKSETA HNPAAAGQID RGLAAASSVI
61 AQGRQAAEGA IADAFRSVRG APAPPQAPGQ APPPSLHERV TRTEQRVLEQ VLKSGVVGEA
121 RIDPAMEAQF AQLAEHLANL IETEVVRQVE LRMVEFDART GARIEAQSAQ VVELCNQLSA
181 EIRQQLARDL RAETALRPAR PAAQKKS
SEQDB ID: 3101377HQB
Reference:
3101377
Name: R body protein RebB-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPYNTAVNSQ ITDAVTQSNV QVVAQAPAMA MGSVYQSMAH STGILLQNSV AAAQQQSALS
61 QAAANQGVMQ IYSLDTTAAA GASEKIGQVG TPDQMSSLLA VLNSFGG
SEQDB ID: 3101377HQC
Reference:
3101377
Name: R body protein RebB-like protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTWPTAVNDQ ITDAVTQSNV KVVGEAPAMA MGTVYQTMAH STGILFENAV AAAQQQNALS
61 QAASNQGVMQ IYSLDTTATA GASEKIGQTG VADNLTSLLT VLNAFKRPQQ PGGI
SEQDB ID: 3101377HQD
Reference:
3101377
Name: endo-RNase L-PSP family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTHKTIQPEG WAPAKGYANG MLTRDGHLYV GGQIGWNAQQ QFESHDFIGQ MEQALRNILD
61 VVEAAGGRAE HITRLTWYVI DKKEYMARQS EIGASYRKVM GRHFPAMAMV VVSGLVEDDA
121 LVEIEATAVI D
SEQDB ID: 3101377HQE
Reference:
3101377
Name: benzoate-CoA ligase, Class: EC6.2.1.25
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: badA-2, Linkage: megaplasmid
Sequence:
1 MLGPSAHIDT FTRDNLPPTD QWPDFLLDGF DYPEHLNVGV ELTDAMVDKG FGDHTALIGN
61 GRRRTYKELS DWTNRLAHVL VEDLGVKPGN RVLIRSANNP AMVACWLAAT KAGAVVVNTM
121 PMLRAGELAK IIDKAEITHA LCDTRLMEEL VSCAKTSKHL RTVVGFDGTS NHDAELDRLA
181 LQKPVRFQAV ETGRDDVALL GFTSGTTGDP KATMHFHRDL LIIADGYARE VLGVVPEDVF
241 IGSPPLAFTF GLGGLAVFPL RFGAAATLLE QASPPNMVEI IQQYRATVCF TAPTAYRFML
301 KAMEEGADLS SLRAAVSAGE TLPAPVYDEW IAKTGKPMLD GIGATEMLHI FISNRFDDHR
361 PACTGKPVTG YQVRILDENG NEAPRGEVGR LAVRGPTGCR YLADDRQSGY VQNGWNVTGD
421 SFVMDDDGYL HFAARSDDMI VSSGYNIAGP EVEAALLSHP AVAECGVIGA PDEARGHIVE
481 AHVVLTPGHT GDALMVKTLQ DHVKATIAPY KYPRSVRFIE ALPKTQTGKI QRFRLRTDIQ
SEQDB ID: 3101377HQF
Reference:
3101377
Name: polyketide synthesis domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTKDLEKGIT ENGTGYDGVV WNILGQTYYP KAVCETTFAF ETNSEPGQFV PVHVHPTQDE
61 FILVQEGELD LKLDGVWSKA RAGDLVRMPK GIPHGYFNKS DKPARALFWV SPARKLKELF
121 EALDNLEDVE RVVELSAQHE VDFLPPEAND
SEQDB ID: 3101377HQG
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MADRSFLTWP FFDETHRARA EAMEGWCARL HVDHGDIDAA CRKLVADLGA GGWLQATAAV
61 EGERLDVRTL CLSREILARH DGLADFAFAM QGLGTGAISL FGTPEQQAEW LPLTRSGQAI
121 AAFALTEPQS GSDVANSTMT ATADGDDYVL NGEKTWISNG GIADVYTLIA RTGEAPGARG
181 LSAFVLPAGL PGFEVVERLE VMAPHPLARL RFTDVRVPKS ALLGAPGEGF KVAMAVLDVF
241 RSTVAAAALG FARRALDESL ARVTTRQVQG APLFDLQMVQ GHIADMALDV DASALLTYRA
301 AWAKDMGAPR VSREAAMAKL YSTDHAQQVI DKAVQLFGGD GVRRGEKVEE LYRDIRALRI
361 YEGASDVQRV VIARQVLAQG
SEQDB ID: 3101377HQH
Reference:
3101377
Name: enoyl-CoA hydratase/isomerase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSAADTTHFL CTIEDGIARI ALDRPERKNP LTFDSYAELR DWFRDLHYND DIKAVVFASN
61 GGNFSSGGDV HDIIGPLTRM NMKELLQFTR MTGDLVKAMI NCGKPVIAAI DGICVGAGAI
121 IAMASDLRIA TPEAKVAFLF TRVGLAGCDM GACAILPRII GQGRAAELLY TGRAMNADEG
181 AAWGFHNRLV AADALEDEAR KLASQIAAGP NFGHMITKTM LAQEWSMSIE QAIEAEAQAQ
241 AICMQTGDFE RAYRAFVAKE KPVFLGD
SEQDB ID: 3101377HQJ
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSAPNPRPDA GPDSKARLRL WLKLLKTTRA VESGLRENLR TEFASTLPRF DVMSALARNA
61 GGLKMSELSG LLKVSNGNVT GIIERLVEDG HVLREPVPGD RRANRVRLTR KGEEEFARQA
121 ARHETWVDGL LGSLDADEAR AITATLDRIL TEGKS
SEQDB ID: 3101377HQK
Reference:
3101377
Name: D-beta-hydroxybutyrate dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MMLEGAHAVV TGGGTGTGAA IAEALAHAGA KVTVLGRREA PLREVAKQHK FIGWVTCDVT
61 DPQAVRTAFR QARELNGPVG VVVANAGAAD STPFRKMSAE GFQQMLDVNL KGVFNSFQAG
121 LADMETAGAG RLIAIASTAG LKGYPYVAGY CAAKHGVVGL IRALAVELGR TGVTANAICP
181 GFIETPMLDR SIANIVDKTG LSAEAAAKSL RKGNPQDRFI QVDEVAGAVL WLCSQAARSV
241 NGHALALSGG EI
SEQDB ID: 3101377HQL
Reference:
3101377
Name: anthraniloyl-CoA monooxygenase, Class: EC1.14.13.40
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRIACLGGGP AGLYFAISMK LRDPSHQVSV IERNKGDDTF GWGVVLSDDA LENLAANDPI
61 SAETIRSNFA YWDDIAVVHD GVRTVSGGHG FAGIGRKAML LLLQDRAREL GVDLQFQTEA
121 RPIAEYQAEY DLVVACDGLN SRVRSDLAAH FKPDIDTRQC KFIWLGTHQK FDDAFTFIFE
181 KTEHGWMWVH AYQFDEDTAT VIVECSQETW DAWGFEHMSK EDSVATCERI FAAHLGGHAL
241 MSNASHLRGS AVWINFPRVL CEKWHHENVV LMGDAAATAH FSIGSGSRLA FDSAISLATY
301 LHSEPTMESA FERYQEERRL EVLRLQSAAR NSLEWFEQVE RYLDMDPVQF NYSLLTRSQR
361 ISHENLRLRD ADWLRSAEQW FQTRAGAAAE PVRAPMFAPF RLRDMELKNR IVVSPMAQYK
421 AVDGCPTDWH LIHYGERAKG GAGLVYTEMT CVSPKGRITP GCPGLYAPEH EAAWKRLTDF
481 VHGETSAKIC CQIGHSGRKG STQLGWETMD APLKAENWDL ISASPIPWSA NNATPREMTR
541 ADMDAVRDQF VAAAQMAERA GFDMIELHAA HGYLISSFIS PMSNNRSDEY GGSLENRMRY
601 PLEVFTAMRA AWAEERPLSV RISANDWVEE AGVTPEEAVK IAAMFHAAGA DIIDVSAGQT
661 SIEAKPVYGR MFQTPFSDRI RNETGIATMA VGNIYEADHA NSILMAGRAD LICVGRPHLA
721 DPYWTLHEAA RIGDRHADWP LPYLAGRDQA WRLADRDAET EIRA
SEQDB ID: 3101377HQM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIDWDDAFDN SSYVPGSGGL AAAWGAAAAA WRKNRGGTLD IAYGRGARNR LDLFCPEGAA
61 KGLVVFVHGG YWQKLDKSFW SHFAAGPLSR GWALAVPSYT LAPEARLGQM AEEIRAAIEE
121 AARHVAGPVR LAGHSAGGHL VARMACADGP LPDRLDRVIS ISGIHDLRPL LGTRMNEVLH
181 LDAAEAEAES PALLSRRAGL SVTCWVGANE RPELVRQTRL LSEAWNVPNV FDPGHDHFSV
241 VAELGRPGSA LLTELLKD
SEQDB ID: 3101377HQN
Reference:
3101377
Name: Trp 2,3-dioxygenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSQAYDPSQE GAKMSYAKDM SYGDYLHMDA LLATHHPQSD AHDEMLFIIQ HQTSELWMRL
61 VLHELRAARA LLLAGGDFRP AFKMLTRVAR IFDQLNSAWD VLRTMTPSDY TTFRNALGNS
121 SGFQSHQYRL IEYMLGNRNT AMMKVHEHRP ELHAMLAAEL EQPSLYHVAL RALAAKTGAS
181 FAPEVYRMDN PHSADAAVQA AWRQVYEDPA KYWDLYELGE KLVDLEDYFR RWRFNHVTTV
241 ERVIGFKRGT GGTSGVQYLR RMLEVELFPE LWHLRGDL
SEQDB ID: 3101377HQP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPELFNSDIE EAPEARLEDT SVMSSISSGD EGDEGNEDNE GNENDEGNEG NEISASTYDD
61 DHNEGNEGNE GNEGVDGQED DEGNEGDEGN EGNEGNEGNE GDEGNEDDEG DENDENDEND
121 EHNEADEGNE HDEGDENFSI ISNNTDGQID LSEADEGNEF DEGDEDSTYW DFNFDDEYDE
181 GIDANMHEAD EGDEGDEGDE NNEGNENNEG DEGNEGDEGN EGDEGLINIG LEGDEGNEGN
241 EGDENDEGNE GNENDENDEG DENNEADEGN EFDEGDEDGE FFGRGQEADE GDEGDEDDED
301 DTFGGLLEEA DEGNEGDEGD EDDEGDEDDE GDEGDEGDES QNGDEGDEGD EGDELNDGDE
361 GNEGDEGNEG NEANEGNEGD EDNEGNEGNE GNEGNEGNEA NEGNEGDEDN EGNEEDEGNE
421 DNEGNEGNEG SEGNEGDEGD EGNEGNEGNE SNEGNEGGLN DEGDEGDEND EGNENDEGDE
481 NNEGDEGNED NEGNEEDEGN EDDEGDEDNE DDEGDEDDEG DEDDEGDESL EPDHPSRHDE
541 GDEGDEDDEG DEDADALLDD EGDEGDEGDE NDDGNEGDED DNLADSGNED DEGDELNEPD
601 NGDEGDEHDE GNEHDEGDED DEGDEGDEGD EGDEDDEGDE SV
SEQDB ID: 3101377HQQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPTAPPLRSD PKLRRAGPDQ NDRIRPTVAS VGITRSRRLR RLHPPRRLRR LRLPRRLRRL
61 RHVRCLRHAR RLRRRCRARS ARRLRRLRCR NRQGCRLRRL RCRRHSRPPH RLRPPHHRAE
121 HRHPRRLRRP RRLHRPRRAA RGGRAQGIRR PRRLRRPRRL RRLRRLRCPR RLRRPRCLRL
181 LRCLRYPRCL RRPRCFRRPR RFRCPRRFRR PRRPRRSGRP HFLRCFRCLR CLHCLRPPHR
241 LRCPRCLHFP RCPRCLRCLR PLRFLRCLRR PRCLRWLRFL RCPRCLRCPR FLRCPRRPRC
301 LRWPRYPRCL RRPRCPRRRR SVRRLRHPRH PRRRSDSRRP RHLRRPRHPR RLRHPHRPRR
361 LRCLRRLPLG GHQKCRPRRL HRLRRLRQLP GLCRRTRHLH RLRRTRYLRR LRYSRRLRRS
421 RRSRCLRCLR RSRRPRCPRY LRPLPGQY
SEQDB ID: 3101377HQR
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: medium
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQYHSPDSFA QAARLAAEAE GITRFLAGGT DVLVQLRADI VTPDTLIDIK KIPGTHDITR
61 NGDGSWTLGV AVPGAELGEH AGLVADWPGV VEAMNLVGST QVQGRATLTG NLCNGSPAAD
121 SVPAMVAASM TATVTGPDGE RVVAVEDIPT GPGRTSLAKG ELVSALHIPA RGANAGDAYL
181 RFIPRSEMDI AVVGCAVNLR LDGDTITEAR VSLGAVAPTV LLVQDAAAAI IGSTLDDAAL
241 DRLAAAASAA CKPIDDKRGT IAFRTEVAGV LAKRVARIAY ARAKGEIIRG HHG
SEQDB ID: 3101377HQT
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: small
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSKIHVSTTV NGDAVEYLCD PRETLLDCLR DKLSLTGAKE GCGTGDCGAC SVTLDGRLVC
61 SCLVLGVEAE GKEIGTVEGI AEGDVLHPLQ QKFIDYAALQ CGICTPGILV AAKALLEQNP
121 DPTEEEVRFW LAGNLCRCTG YDKIIRAVMD TARDMREAV
SEQDB ID: 3101377HQU
Reference:
3101377
Name: xanthine dehydrogenase family protein, Subunit: large
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MALDDRKSDG FTFVGTRPNR PDGLDKVTGR ARFGADAHAP GMLHGAILRS PHAHARILRI
61 DTSKAEALKD VKAVVTRADF SDKVEFAPGL EGDFWNILEN VMAGDKALYD GHAVAAVAAT
121 SALAARDALK LIEVDYEVLP HVTDVDKAML MDAPVIRQGA ADYSVPEGMH PNVVRKHESG
181 HGDVEAGFAE ADLVIEDHFT TEATHQGYIE PHACLATLGA DGKGELWCCT QGHWIVQKTC
241 AALLGIETAN LRVTASEIGG GFGGKTTVFI EPVALALSRK ANKPVKLVMS RSEVFRATGP
301 TASASMDIRI GMKKDGTLTA AQGTFRLQGG AFPGGPADFT AMCAFAPYNL PHVRQVGYDV
361 MTNRPKQAAY RAPGSPMAAF AVESVIDELC NQLGLDPIEV RLKNASREGT KASYGPRFQR
421 VGLVETLEAA KAHPHYTAPL KPGQGRGISC GFWFNHGGET SVSLALSEDG SAQVMVGTPD
481 IGGSRASMAL MAAEVLGIPY ENIRVTIADT ATLGYNDVSH GSRVTYASGL ATIKAARHAV
541 EKLCERAAKK WGIPVDAVKW ENGCAVPSGP NAGEFDPLPL ADITADMGRT GGPISGHFEA
601 TPEGAGVSFA THIVDAEVDP ETGKTKVVRY TVVQDAGKAI HPTYVEGQFQ GGAAQGIGWA
661 LNEEYIYGAD GRLQNSVFLD YRIPVASDLP MIDTVIVEVP NPGHPFGVRG VGETSICPPL
721 AAIANAVSAA AGARMRQLPM SPPRILAALK ADG
SEQDB ID: 3101377HQV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MVEVHLWSGL RSLAGGCEVV SVEARDTGEM LRALVRAHPE LQAPIDAGVS VAIDGRVIAS
61 GLTEPIPEGA EVYLMQRLRG G
SEQDB ID: 3101377HQW
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSLIPGGKTV YGATVGILML ETRFPRIPGD MGNALTWPFP VQYRVVRGAS PDRVVRGDPR
61 ALLDTFVEAG RDLVATGADG ITTNCGFLAL VQEELRAALG VPVATSSLMQ VPMVQALLPP
121 GKKVVILTIS KATLTPAHLA AAGVPLDTPV YGTDAGRVFT RDILGDAPQI DFDACRLDML
181 DAADEIVAQE PDAGAIVLEC TNMVPYAADL RRRTGLPVYS IYSMVSWFQA GLMPRRFEQP
241 LDDPRS
SEQDB ID: 3101377HQX
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTKSESNVDR LYQALRRMAA DFAFKPDARI NESALATQLD ASRTPIREAL NRLVAEGFLT
61 FRSGRGFFCR SLSPELVMDL YEARVAVEVE AARLAALRGD EREIAILMQD LEDIAPDYTA
121 RADTEALLSM DEWFHTRLCA LSGNGELARM LDNLNDRIRY LRLIDLRRLQ ALGPQGQTMV
181 SAHQRILDAV ARHDADGAMA EMRAHIERRR EGATQAVRDA YAQLYVPEL
SEQDB ID: 3101377HQY
Reference:
3101377
Name: acetolactate synthase, Subunit: large
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MDNRMNGAEA MVRMLEAQGV RHIFGLCGDT TLPFYDAMLR LDHQITHVLT RDERCATYMA
61 DGYSRVTGRV GVAEGPSGGG ATYILPGLIE ASESSYAVLG ITTDISVASY GKYPLTEVDQ
121 KALMAPLTKW NTVISRADHI PRMVRAAFRA MTTGRSGAAH IGLPYDVQYD PVDAADIWAD
181 PVTASYPAYP QSPAPGAAQA AVEAILSAKN PLIVCGGGVV IAQAWEELDR LATRLDIPVA
241 TSISGQGSLA ETHPNCLGVV GSNGGTDETW EMMEAADLVV FMGCRAGSTT TARWEAPKPG
301 TRIVHFDNDP MVMNANYRTE VAVVGDLRLA LAEVNAALDA RAQGADTFGG AAAVAEKKTR
361 KFEAFEVLAR SDQAPIRPER VIRALMNTLP EDATVVSDPG TSCPYFSAYY QLPRPGRHFI
421 TNRAHGALGY SLSAALGAWY GRPASKTVAL MGDGSLGFTV GELETVCRSR APITYVVFSN
481 ATFGWIKASQ FADKDARYYN VDFNRTDNAA IAAAYGVKSW RVEDPAELER VLAEAIAHDG
541 PTLVDVITQP LEESNAPVRR WMG
SEQDB ID: 3101377HR
Reference:
3101377
Name: flagellar P-ring protein, Isotype: FlgI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: flgI
Sequence:
1 MTLIRLLACL LFLPCLAQAG AVRLKDLVEF DGVRGNDLVG YGLVVGLNGT GDGLRNAPFT
61 EEIMSNILER LGVNVTGEDF RPKNVAAVFV TAALPPFARV GSQIDITVSA IGDSKSLLGG
121 TLIMTPLNAA DGQIYAVAQG TVLAGGASAE GQAASVVQGV PTSGVIPAGA RVEREIEFDL
181 GSLTQLRLAL REPDFTTAGR IETAVNSAFN GRVAVMRDSG TVELDIAATQ ARSPAHVIGR
241 IENILVEPER KARVVVDQRS GTIVMGADVR ISRVAVSQGS LTLRVEEAPI AVQPNPFADG
301 DTVVVPRTNA EIEQEPGIKL AEVPESASLS DVVAGLNALG VSPRDMIDIL KTIKAAGALH
361 AEFVVR
SEQDB ID: 3101377HRA
Reference:
3101377
Name: phenazine biosynthesis protein, Isotype: PhzF-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTPNVDRIAA FSDGTLGGNP AGVVIADQMP AEDEMQRIAA EVGYSETAFA APQGDGWRVR
61 YFAPVGEVAF CGHATIALGA TLAGRFGDGT YALHLNDAGI SVEGLRHGDQ VQAALISPPT
121 RSSAVDAEVL EAAMALFGLD DTDLDPTLPP AVANAGNDHL VLTLRNRSRL ATMDYDLNRG
181 AAYMRLNGFT TINLLWVETP QRFHSRNAFA IGGVLEDPAT GAAAAALAGY LRDLGWPHGG
241 NIDIVQGEDM GARSLLRVEI GTTPGDGVRV SGSARQIG
SEQDB ID: 3101377HRB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLRTLLNTAA TITAGSLFSA GVMTLGFYIL PSSLLAGEPA LTRFATETHA RFAIAADGEE
61 RFAQVN
SEQDB ID: 3101377HRC
Reference:
3101377
Name: pyridoxamine 5'-phosphate oxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPRAFSQLTF TPAVRAHQER LGSARSYAKF IEGGPQQGHE IGPAEQAFIE ARDGFYQATV
61 SEIGWPYVQY RGGPAGFLRV LGPRTIGYAD LSGNRQYISR GNLDGNSRVA LILMDYANQR
121 RLKILGRMKF TEGPEAAASL LPDGQTHPAE RAAIISVEGL DWNCPQHITP RYTEAELAPH
181 LNALGAELAQ LRAENERLKQ QLSEQD
SEQDB ID: 3101377HRD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTRPPLPPFT AETAAEKVRL AENGWNNRSA DVVTPAYSDD SRWRNRAEFV TGHDDIHAFL
61 TRKWDKELDY RLIKELWAWS GNRIAVRYAY EWHDDSGNWF RSYGNENWEF DEDGRMSARH
121 TSLNDLPITE DERLFHWPLG PRPDGHPGLT DLGL
SEQDB ID: 3101377HRE
Reference:
3101377
Name: transcriptional regulator, Isotype: TetR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRPNKKDELV RKALTVFYRD GFHATGMDKL VAETGVSKTS IYKHFRTKEE LIVAVLKLRD
61 ENFRAWFEAR VDELADTPAD KFLAAFDALG EWFEEDSYRG CMFINAGAEY NCKDDPIRME
121 AAHHKQVVLD YFTDLARQAG ARDPEALGCQ ILLLKEGAIV ISSLMGNSKP ACDAKDTARI
181 LLDNALKG
SEQDB ID: 3101377HRF
Reference:
3101377
Name: fatty oxidation complex, Subunit: alpha
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabJ-2, Linkage: megaplasmid
Sequence:
1 MGDFHYAKDA DGIVTVTMNM DGPVNAMNAE FWPLFAATMD RIEAEPELKG VIWTSAKDTF
61 FAGGDLKMLK SIEPDGVEAL FRSVEATKAV MRRMEKQPVP HVAAINGAAL GGGFEICLAC
121 NHRIAADNPK TKIGLPEVTL GLLPGGGGTV RLTWLLGLEG AMPFLLEGRQ VSPDKALKAG
181 LIHQVVPADQ LLTRAKEYIL SVQGDAAAVT QPWDTKGYKI PGGPSTAPHN MTRIAGAAAM
241 LFKKTRGLMP APTRILDIMT EAAGKVDFDT ATRYESRRFV SLTPLASTKN MIETLFFGMN
301 KVNGGASRPK GVPTSKVQRL GILGAGMMGQ GIAFSAATAG LPVVLKDQTL EAAERGKAYT
361 ATLLDKRVKQ GRMSAEEREA VLALITPTDK ADDLKGCDLI IEAVFEKIDI KDAVLAEHEA
421 LLAENGIWGS NTSTLPITRL ATGATRPENF VGLHFFSPVD KMPLLEIIAG EKTSDETLAR
481 AFDFARQIRK TPIIVGDSTG FYTSRTIGTK IIEAVELVAE GHDPLRVDNL SRLTGMPTGM
541 LSLLDEVQIK LVTDIYNTQV EMGLLDPDKE QNPAARAMLA EMISQHGRHG RATGKGFYDY
601 DGQGKTIWPG LAAWRKEGAD IPDADIKDRI LFRAVLESLR CLEEGVLRTV EDGNIGSILG
661 IGAPVHTGGY LQYVNTYGPA RFLARCEELA GKYGDRFAPP EILRTHVAEG RALA
SEQDB ID: 3101377HRG
Reference:
3101377
Name: Ac-CoA acyltransferase/thiolase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MATPAYIYDA LRTPRSRGKA SGALYEVKPI QLAAGLLREM QARHDMDTSR VGDVILGCTA
61 PVGDQGACVA KAAVQAAHWD EAVPGVQLDR FCASGLEAVN MAAAKVGSDQ EELVVAGGIE
121 SMSRIPMLSQ GGAMFTDPDF VIDQNSAPQG IGADLIATID GYSREDVDAF AMESQRRAAH
181 ARDSGWFDRS VVPVRDENGL TILERDDFIK PDTDMQKLGA LNPSFAGMGA FGYDDMALAK
241 YPQVARINHV HTPGNSSGIV DGSSAVLIGS EKAGRDLGLE PRARIVSATV IATDPVIMLA
301 GPGPAAKKCL DKAGLKVSDI DIWEINEAFA SVALRYMKDL DIDHEITNVN GGAIAMGHPL
361 GATGGMLVST VLDELERRGA KRAMISLCVG GGMGISTLIE RL
SEQDB ID: 3101377HRH
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAVTIPATIV ANILEGAVAR GADPAAILAR ASLPGVVGPL EAPDFVRLVR AVTLTLDDEL
61 AGLQDRPQRI GTHAIMAAHV SHAETLGAAY ARAAGFMDLM DNSFRYSLRE SGANLIFEMT
121 RIPGREVLNN AAVEMVLVLV SRMLAWLVGN RGALNGAWFD YVAPGHVAAY RAMFQRAPMQ
181 FGQCSSGLAI PLALTRLPVL RSEDQATAYA RRTPLDAFLP QDATTGLPLE VAVAVEACLS
241 EQGRLPDMAQ VARDLNLAPH TLRRRLKGDG VDYSNIRKQV RRDMAVRLLA TTGDSVESIA
301 AQTGFSEASA FIRAFRSWTG LTPRAYRKSE L
SEQDB ID: 3101377HRJ
Reference:
3101377
Name: transcriptional regulator, Isotype: ArsR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTVQDAPSLP PETPDDMASN AARAAGYLKT LAHEGRLMIL CHLGAGEKSV GQLENLLDIR
61 QAAVSQMLAR LREEGLVSTR REGKTVFYSL SDSNTEQVIG LLYSLFCSND
SEQDB ID: 3101377HRK
Reference:
3101377
Name: mandelate racemase/muconate lactonizing enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRLQDLDIIV TAPPAPGWGG RYWILVKVTT DTGITGWGEC YASSVGPDAM THVIRDVFDR
61 HMAGENPENI ELMFRRAYSS GFTQRPDLTV MGAFSGLEIA CWDILGKDRN RPVHALIGGR
121 MNQRIRAYTY LYPLPHHDIA GFWTSPDQAA ECAAEMVRRG YTAVKFDPAG PYTIRGGHMP
181 AMSDISLSVA FCKAIREAVG DKADLLFGTH GQFNTAGAIR LGQALEPYAP LWFEEPTPPD
241 NLEDMARVAR NVRIPVATGE RMTTKTEFGA VLRAGAAEIL QPALGRAGGI WEMKKVAAIA
301 ELFNAQMAPH LYAGPIEWAA NIQLAAAIPN ILLLESIETP FHDALIKGSI RVDNGFVIPP
361 DAPGLGIEVD EELARAHPFT GNDLHLNMQE APCDYASGNA FQGGAPTI
SEQDB ID: 3101377HRL
Reference:
3101377
Name: peptidase, Isotype: M20/M25/M40 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MIKRILAGLG LVILALVAVI AFRTVQYRPG PVEASQPFSV GADIDRAAQV LAEAVRFRTV
61 STDMSHPDFP AFLAFLEQSF PAVHRTMERT LLEPVTPLYK WQGSNPDLPP VMLAAHYDVV
121 PVTEDTLGEW DHPPFAGVVA DGFVWGRGTL DNKGALIAAL TAAEKLINDG FTPERTIYFS
181 FGGDEETGGL GAIAVAEHLR AQGVQLAWVL DEGSFVLDKI IPGLDVPVAS INLAEKGYLT
241 IQLVAHAEGG HSSMPPRHTA VGQLARAVAR LQEAPMPGGL TGVSAEFFDA LGRHFSIDKR
301 AIFANRWLFD PVLEGILSGS PSTDAMLRTT TAPTMLEGSP KENVLPTRAV ATVNFRLHPR
361 DSIDDVLVHV KAAIDDEGIE IVADRDLASP ASPVSDSQGA GFKDVEASIR EVFGPIASVP
421 GLTIAATDAR HYAKAADAAY RINPFQIEGD DLARFHGIDE RLSIANIERG INFYAALIGK
481 Q
SEQDB ID: 3101377HRM
Reference:
3101377
Name: oxidoreductase, Isotype: Zn-binding dehydrogenase family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MQKIRAAVCH EFNAPLVIEE VLLAPPGTGE VEVTLDAVAI CHSDISYADG AWGGHLPAVY
61 GHEAAGTVSA VGPGVEGFAP GDPVVVTLIR ACGTCANCAG GQPTICDTPY DGVKQGPLRT
121 ADEGPLLQAM ACGAFAEKVV VSQRQIVRIP ADMGRDVACL LSCGVITGVG AAVNAARLRA
181 GQDVVVIGAG GVGLNAIQGA RIAGARRIVA VDMTEEKLDI AREFGATHGV LATSPKPWRA
241 AYKALGGRGA DAVLVTVGAV RAYDEAPKYL GWGGRAVMIG MPHAGAMAQY EPMSASFQGH
301 GLIGSKMGDV VIQRDIPWMI DLYQQGRLKL DELISGRWSL DQINEAIADT RTGSAKRNVI
361 LFNH
SEQDB ID: 3101377HRN
Reference:
3101377
Name: tetracycline resistance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MRLPFLFILA TVMIDAMGIG LIMPIMPDLI VEVKGGTLAD AALWGGVLST AFAAMQFLFG
61 PVIGSLSDAL GRRPVLLVSL FVMALDYVVM ALAGSIWLLL AGRIVGGITA ATHATASAYM
121 ADVSRPEQKA ARFGMLGAAF GVGFVLGPLM GGVLGEFGTR APFWAAAVLA GLNFVLGLFV
181 MNETVTAATR RAFSWASANP LGAFRMLGQV PGLKGLLWAY FLYSVAIYVY PAIWAYFSQE
241 RFGWSSRMIG LSLGIFGFLM AVVQGGLLPH ITRRIGERRT VIWGQLFDFV GFGLLAFIAS
301 GTLALILIPI TAMGAVVPPA LQAIMSRSVA DDQQGALQGV MSAVHALSMI VSPLLMASVF
361 ARFTGPQAPI YLPGAPFLVA LALMAAGLVI FLRTRTAVT
SEQDB ID: 3101377HRP
Reference:
3101377
Name: 3-carboxy-cis,cis-muconate cycloisomerase, Class: EC5.5.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pcaB, Linkage: megaplasmid
Sequence:
1 MAASVFDSAH LARLFPAGDA GRLFTDGAEL RAMLLVEGML AKAQGALGLI PVESAGAIHR
61 AAMEIHLDPG ALAEATGANG VSVPALVAAF RSEMQAPEHA QYVHWGATSQ DIIDTGLMLR
121 LRQAVSVLER DLAAVLETLA ALAESHADLP MAGRSYAQHA TPTSFGAVVA SWGAPLLDLL
181 RELPGLRRDC LLVSLSGAAG TGAALGPEVA QLRADLAQLL NLADPGRSWH TDRTPVLRLA
241 EWCTRIALAL GKLGEDAIEL SQTGIAEITL GGGGASSTMP QKQNPVGASA LVALSRQVPG
301 LLAVLHGAGV HRHQRDGAAW FTEWMCLPQI VLGAAASVQI TQRLLPGLAP CPEAMAAALD
361 TNYGTIHAEA VNFALAAHLP RPEAQAAVKT LCAEAMESRT PLRELIARDW PQLDAAALTD
421 PSRQLGAAPD EARAFAARVR SQGAT
SEQDB ID: 3101377HRQ
Reference:
3101377
Name: esterase, Isotype: EstC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MADFLLIHGS CHGAWCWRDL IPALEERGHT ARAVNMPSHG SDVTPIGEVT LNSCRDAVLG
61 ASTPDTLIVG HSWGGYPISA AAEQAPDAMR GLIYLCAYVP LSGHSMIDMR KRAPRQTLLD
121 AVIKSEDGLS YTVDPERVAD LFYHDCRAER VHYAQPRLCP QAIAPQETPL TLSDRFASVP
181 KVYIRCAEDR TIPPEYQEEM TADWPSDRVH VMNSSHSPFF ADPQGLARLL TRIEGQF
SEQDB ID: 3101377HRR
Reference:
3101377
Name: 3-oxoadipate enol-lactone hydrolase, Class: EC3.1.1.24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: catD, Linkage: megaplasmid
Sequence:
1 MQIADLGDIK LHFRVDGDPD GAPVVFINSL GTDLRLWDPI LPHLPAGLRL IRYDKRGHGL
61 SDAPEGPYAM GTLVRDAERL LDLLDIRDAA VVGLSIGGMI AQGLAVKRLD QVRALVLSNT
121 AAKIGTKEMW QQRIAAVTAG GIEALADTVM ERWFSRGFRA TPELALWRNM LVRQPVQGYA
181 GCSAAIAGTD FYTPTSGLRL PTLGIAGDED GSTPPDLVRE TVDLIPGSQF HLFRKAGHLP
241 CVEHPAAYAE RLAQFLRDVG HF
SEQDB ID: 3101377HRT
Reference:
3101377
Name: pyridoxal phosphate-dependent enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MSTLELIEAA AERLSGHVRR TPLLSSPFLD EIAGRRVLVK PECLQHTGSF KFRGAWSAIS
61 ALDPEARARG VIAFSSGNHA QGVAHAATLH GIASVIVMPS DAPRLKIDNT RALGAEVVLY
121 DRGRESREEI GTALAGERGL TLIRPYDEPQ VIAGQASVGL ELAEQAGELG VESGDVLVCC
181 GGGGLTSGVA LALEARAPGL RARPVEPEGF DDVKRSLAGG TISRNNSETG NICDAILTPE
241 PGRITFPILS RLCGPGLAVT EDEALRAMAL AFLRLKIVLE PGGAVSLAAA LFHPDQVEGD
301 TVLAVASGGN VDAALFRTAL ELHA
SEQDB ID: 3101377HRU
Reference:
3101377
Name: hydrolase, Isotype: alpha/beta fold family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MAAFTTTDGL RLFYEDEGTG QPLLCLAGLT RCSRDFEFLR PHVTDLRLIR LDYRGRGQSD
61 YDPDYRNYNV LREAHDVIEL LDHLGLDRVT VLGTSRGGMI AMALAASHPD RLAGVILNDV
121 GPVIEPAGIA RIMDYVGKKP VSKTHDQAAL ALKQAMEPQF PGVPLSVWRK QAEIQYAASD
181 QGLALRYDDG LHKALLDQAA TGAIPDLWLF FEALRDIPTA VLRGANSDIL GAGTVAEMHR
241 RHPGLISAEV PDRGHVPFLD EPQSLDLIRR ILETA
SEQDB ID: 3101377HRV
Reference:
3101377
Name: haloacid dehalogenase, Isotype: II, Class: EC3.8.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dehII, Linkage: megaplasmid
Sequence:
1 MPITTCIFDA YGTLFDVAAA ARQAADEPEN AALRPHWQAL ASHWRLKQLQ YSWLRAITGA
61 HTDFWQVTGE GLDWALEAVG LAGDAVLRQR LLDLYWQLQA YPEVPAMLRA LKGAGLETAI
121 LSNGSPDMLD GAVRSAGLGD VLDDVLSVES VGIFKPDRRV YDLVGQRFGC PPEAVLFVSS
181 NGWDAAAAAG YGFRTAWVNR AGEPVDRLPW TPDHILSDLT GIPELAGV
SEQDB ID: 3101377HRW
Reference:
3101377
Name: peptidyl-Pro cis-trans isomerase, Isotype: FKBP-type
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTQIKQGDTV RIHYTGTLLD GKTFDSSEGR DPLEFTVGSG QIIPGLDKAM PGMETGEKKR
61 VEVPCAEAYG PLNPEARQAI PREGIPDDIP LELGTQLQMQ SPDGRVIPVT VVELEEATVT
121 LDANHPLAGQ DLIFDIEVVS IN
SEQDB ID: 3101377HRX
Reference:
3101377
Name: enoyl-acyl carrier protein reductase, Class: EC1.3.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabI-3, Linkage: megaplasmid
Sequence:
1 MSGLLQGKRG LIMGVANDRS IAWGIAKAMH EAGAELAFTY QGEAFGKRLE PLAASVGSDF
61 MVDADVTDDA SLDTAFEQLA ARWPTLDFLV HAIAYSDKSE LTGRFLNTTR ANFKHSMDIS
121 AYSLIEVARR AYPMMKENGG TVLTLTYQGS NRVVPNYNVM GVAKAALESA TRYLANDLGP
181 DGIRVNAISP GPMKTLAGAA IGGARKTFKF CDQNAPLRSN ATLEAVGGTA VYLASDAGAC
241 TTGEIIRVDG GFHVLGMPQS EFM
SEQDB ID: 3101377HRY
Reference:
3101377
Name: 3-oxoacyl-acyl carrier protein synthase, Class: EC2.3.1.41
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabB, Linkage: megaplasmid
Sequence:
1 MRRVVVTGLG IVSSIGVNAE EVTASLRAGR SGIVACEEMA EHGFRSRIAG TLKIDVAEHV
61 DKRALRFMGP GAAYAHIAMQ QAIADAGLSE EQVVNPRTGL VAGSGGPSTS AMLSAHQTVL
121 KTGATKRIGP FAVPKCMCST ISANLATAFK IKGLNYSITS ACSTSLHCIG NAAEQIMMGK
181 QDVMFAGGGE ELDWTLSCLF DAMGAMSSKY NDTPEKASRA FDQDRDGFVI SGGGGIVVLE
241 ELEHALARGA KIYAEVTGYA ATSDGHDMVA PSGEGGERAM RLAVSTLPED RKISYINAHG
301 TSTPVGDVGE VEAVRRVFGE GRVPPISSTK SMTGHAQGAA GALEAIFCLL MLEHDFITPS
361 INVETLAEGI QPGEVATQYV ENAGLDSVMT NSFGFGGTNG SMVLSKFRG
SEQDB ID: 3101377HT
Reference:
3101377
Name: flagellar biosynthetic protein, Isotype: FliP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliP
Sequence:
1 MRRAAPVLAA ITLLTGAMLA GPVAAQDISL SLGEGGSVSA RTIQLILLIT VLSLAPGLAI
61 MITCFPFLVT VLAILRQGIG LQQSPPNMLI VSLALFLTYF VMEPVFTEAW TTGIAPMMAE
121 ELALEPALEK AIAPFKAFMA ARLDADTFFA MANLRPDGAA LTATPEAPLS VLVPSFMLSE
181 IARAFQIGFL VFLPFLIIDL VVAAVLMSMG MMMVPPATVS LPFKLAFFVL ADGWSLIASA
241 LVRSYMP
SEQDB ID: 3101377HTA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTVAIPDLRV CANLTGKTLL ICVGAAKCAT SWLHDYLGSR PEVTVSPLKE LHFFDSKFPE
61 HALGDADGLA LARLSFQLGQ AGDAVANLRH RAIFQASLDR AQMIYDDNAY FGHFARLCGP
121 QTRCFCDLTP SYSAIGAEGF AYMKRFCASQ DIEVKILFLM RDPVRRFWSQ LRHLQQMNPV
181 NDVASKWRHA LTAPALLARA DYRGIVLALE QVFPSANLLC LFYESLFEGD DAIRRLCRFI
241 GIPFAPAATG QRHNETTVRL PLSDDARDAF RHLLAPQYDF CRERFGRSIP GSWLA
SEQDB ID: 3101377HTB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLDSVGRFCY HAATFLNFVT CFGAIEDSRV F
SEQDB ID: 3101377HTC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MPEDGIGFEF FRDDQNPRLT IVNEAALQNA SNQLFNEIAH LRAFDHLGNA VEAVQKAAQH
61 KARQDPPDWD DNVPPDATDG GDFFLLG
SEQDB ID: 3101377HTD
Reference:
3101377
Name: beta-hydroxyacyl-acyl carrier protein dehydratase, Isotype: FabA, Class: EC4.2.1.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fabA, Linkage: megaplasmid
Sequence:
1 MAQYPSSFDK EDLLKCARGE LFGPGNAQLP APPMLMMDRI TEVSADGGAH GKGHIRAEFD
61 ITPDLWFFDC HFPGNPIMPG CLGLDGLWQL TGFNLGWRGW LGRGYALGVG EVKLTGMVRP
121 DRKMLTYKVD FTKAIQTRRL TMGVADGIVE ADGEVIYQVK DMKVALSES
SEQDB ID: 3101377HTE
Reference:
3101377
Name: transcriptional regulator, Isotype: fur family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MTPNSQEIAT DWLVDAGLRP TRQRVALAEL LVGDGRHRHV TAESLFDAAR SKGAAVSLAT
61 VYNTLRAFCD AGVLQEITVD GSKSYFDTNT HDHPHFFWED EGRLSDAPSD QLVIQRLPEA
121 PEGVEIASVD VVIRLRRKG
SEQDB ID: 3101377HTF
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: megaplasmid
Sequence:
1 MLYLTLRQYE YVCAVGRHGS LSAAAAALNV SQPALSAALT KIESHLSQPL FMRRRGSAMA
61 VTPAGRRFIT AAEALLSDAA RIEDPAHPRP ARRQLHLGCF TDLAPFLLAP ALHALRRALP
121 DVTISTRADG FEALISALLK GQIDLALTYD LGLDAGFDRQ PLYQSHPQAV MAPDHPLAQG
181 TDPDLEALTA HPLILSDEGL SAQHMLGLFR RRGLAPVVAH RAATLELLRS LAAHGEGVGI
241 SYAAPAHPAS YDGRPLLSRP IAGADLAESV ILARHGTGPA DRTTARAAQV LTDLFVAR
SEQDB ID: 3101377HU
Reference:
3101377
Name: flagellar motor switch protein, Isotype: FliN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliN
Sequence:
1 MRWTPSCIRP KRYRDMSDPQ KPIEAKNPFN SVPIEITVSV GRARPLIRDL IGLGENAVLT
61 LDKRVEDPVD LYVGDRLVAR GQLEELTGEQ AGQLAVRLTE ISDLASDLG
SEQDB ID: 3101377HV
Reference:
3101377
Name: flagellar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTIAHLLEDF EINLMDPSRV RLMDEDTLEE YRLTAFEQGY SAGWDDAVSA RSEEQGQLNA
61 TLARNLEDLS FTYHEALSQM TQSLEPMFKS LIGTVLPQTM DRSYTHHIVE QLKSMAREQV
121 AQPALLIVPS GVSATLKPIL SEEFSFPVQL VEESSLPAGQ ACLRVGTAER DVDCSALLSS
181 ISDAMDSFLH QAKEVS
SEQDB ID: 3101377HW
Reference:
3101377
Name: flagellar M-ring protein, Isotype: FliF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliF
Sequence:
1 MQQIRSVWAS LDKKKQFIVI GAALVVFLGV LGLTRMAGSP NMQLLYAGLE SGSAGEVVRS
61 LEQQGVPYEV RGGSIYVPAA RRDELRLTLA SEGLPANGGR GYELLDSLSG FGTTSQMFDA
121 AYWRAKEGEL ARTIVASPHV AQARVHIANS SSNPFQRSIE PTASVSVVPS GSEVTPAQAN
181 AIRYLVASAV SGMVAEGVTV VDSNGNVIGT PETPTSSTSE DRAQQMRERV LRLVEARVGR
241 GNAIVEVSLD TVTETESIRE RRFDPNGRVA ISTDVEERSD ASKNQTTDVT VASNLPDGDG
301 AVGDESNSST SATRERVNYE VSETETEILR TPGAIKRLSV AVLVNGLPGA AQDGSSQFTP
361 RPEEELAALR ELVESAVGFN QDRGDVITLK SMELPNLEPQ GTLASSSMLQ GLTFDLMSLI
421 QMATLALVTL VLGLFVVRPI LTKPAVSAPL LAVAPPPNQS GAQSAGPALT GEIDDGSPRQ
481 NQLPGAATQQ RGTVPALVGS SGTPVDRLRA MIGDKQEETV EILRSWLEEN EEKA
SEQDB ID: 3101377HX
Reference:
3101377
Name: flagellar basal body-associated protein, Isotype: FliL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fliL
Sequence:
1 MTDATADEVE PEKKSGKKGL IVGLVLALVG AGGGFYATVS GLIPLGAQPA EEHGESGGDH
61 GAVVPDALPN VAYVDLQPIM VSLLGEGGQR HLRFHAQLEV PEQYLADVEK IRPRIVDVLN
121 GYLRAIEISD LSDPLALTRL RGHMQRRINI VAGEGRVKDV LVMEFVLN
SEQDB ID: 3101377HY
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELIADILLV AGALGAGLYC FVLGRRLKRF NDLERGVGGA VAVLSSQVDE LNRTLAAARE
61 ASDNSGAALG DLTGRAEAVA QRLELMMASM HDVAPAQEVS APPEVVRQEP KPARPDEAKP
121 APAGVMFMRH DRGNSGTTP
SEQDB ID: 3101377J
Reference:
3101377
Name: heat-inducible transcription repressor, Isotype: HrcA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: hrcA
Sequence:
1 MSDARKILDD LNDRSREVFR LIVESYLDSG EPVGSRTLTR TLSEKVSAAT VRNVMQDLEF
61 LGLLDSPHIS AGRIPTQMGL RMFVDGLLEV ADLSLDDRAK LDATLGTNAG DVGGTLDRIS
121 ATLSRVTQGA SLVLTPKHEA EIRHIEFVSL AQDRALVVLV FSDGHVENRL FAPPPGQTPS
181 SMREAANFLN ALIEGKTLSE VRRLMQTEIG ARQQEIDQLA RQMVESGLAV WDREGEEAAR
241 LIVRGRANLL EGTGQEQELE RIRVLFDDLE RKRDIAEFLQ LTEDGEGVRI FIGSENKLFS
301 LSGSSLVVSP YMNADRKVIG AVGVIGPTRL NYGRIVPIVD YTAQLVGRLI SDRS
SEQDB ID: 3101377JA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRKKSGTAG RGGALLLISV FMIGSAVIRI ALEAGPALAR GAVEEPVSDL ARKDERATPA
61 AADLHALLAT LRQREQDLEQ RESRVMERMR ALEIAEVAID RKLAELTQAE EALREAVATA
121 SVAAENDLSK LTEVYEKMKP KESAALFEEM DATFAAGFLA RMRPEAAADI MAGLSPKVAY
181 TISVVLAGRN ANVPTE
SEQDB ID: 3101377JB
Reference:
3101377
Name: chemotaxis protein, Isotype: MotA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: motA
Sequence:
1 MIGILGIVVI FVMVFGGYLA AGGKMTIILK SLPFEMMMIG GAATGAFLIS NDMGGVKHTL
61 KDVGKVFKGP KWKPEDYRDL LCLLFSLIRI ARQNPVEVEQ HIEDPASSAL FSKYPRIQAD
121 HEAVDLICDT MRSASMNYDD PHQVEEVLEK RMEANLHHAM HSSHALQTVA DGLPALGIVA
181 AVLGVIKTMG SIDQPPEVLG RLIGGALVGT FLGVFLAYGL VGPFASKVKA VVEEDNHFYL
241 LIKEVLVANL HNHNPAMCIE VGRQNTPSHI RPGFTDLEQA LKDLKQDAA
SEQDB ID: 3101377JC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMQRILAVFL LLYLALPVAA AEVEVRSGEH QSFTRLVMRI PSQTKWTLEN STGSARLKVD
61 LPDLKLDYGE VFDRVPRKRL SELHQEKAGA PLELQFACDC EARAFVQGGT LLVIDIRDRP
121 ASDPPLVLPL VPERVLASGD GVGADHPIED REEDSGVAVN PRSQPSGGAS QHTFLDFSAP
181 MAGERTVENR LYSRIMRGVD QEVLALSPRE ATDPDDQISA AQAALTETLA AGLGLPNLRV
241 TTVVDRDLRA AREGTASPTI ARKCVDDQKL AVPDWADDSP FSTQYAVLRD GLYGEFDRIN
301 AQAALALVRF YIHFGFGDEA KVNLELLQPA SPDRQLLASL AAAVEGRPAP VDNPLAGLQG
361 CDNDAAMWSV LSERHAPETT NTNAVLRSYG RLPVHLRAYL GPVLGEYLTD AGFVDAAQQL
421 VRAVERSDEG DKASIAVVEA KLAGLKNEPA VQEQKLTEVI EDASASTHAP LALIDLIEKR
481 WVEGGDVTEQ ELLLAASFVH EYRRSEIGPQ IQTAYVIAQA LSAQFDEAMK TLLDPGQDRK
541 SQVWRETVDR IVKRITSHGD DITFLRHVAM LESDLFLSVN TDTVTQVARR LNDLGFFEDA
601 LRYADRPQDR KSRPARVEII ARATLGTGRP HRALLELETA SGPEVERLRA QAMREAGALE
661 QAAEALTRAG DLEAASRYLW LAGAEAPIDG GEETRFGGIH LMGRALLEER EPSSGTPLAA
721 AREMVDDSAR VRDQIDSLLN RLP
SEQDB ID: 3101377JD
Reference:
3101377
Name: MmgE/PrpD family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKQQSSLSP TFGRIAAFAL DTRSEDIPAP VREAAALMML DTLGVIAAAS PLDAGVIARD
61 SATLLYGSAD PRYQARMMFD GRAVSLAGAT YAAATQTDNL DGHDGYNPTK GHIGVVVIPT
121 LATLAQHLPD LSGPEALAAV TVGYEVAGRA GIALHATVSD YHTSGAWNCL GVAAMAARLR
181 GQDPETLRQA MGIAEYHGPR SQMMREIATP TMLHDGSGWG ALVGTSAAIL AERGFTGAPA
241 ITAEAEEAAP YWADLGRFWQ MQHQYVKPYP ICRWAHAAID GVRQVMLDHR LSHADIAQVH
301 VNSFHQAACL YQGLPPTTAI AQYALPFPVA VQIAYGRIGV EHVAGSGLTD PLVAEIMQRI
361 TVSEDPRHSS RFPAGRWADV EITTTDGRVL KSGDINARGG PEAPMTRDEL TDKFMDFAVP
421 CLGRARASAL RDATLGLTAP DSRFCDVMDL LFDPIGQTIV
SEQDB ID: 3101377JE
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKHLPHLTFL RSFEAAARHL SFTAASEELH CTQSAVSNHV RSLEEFLGRP LFVRLPRTLA
61 LTELGEAYLP SVRRALQEID IATEALLSQR HRREVVVSCP TSLASLWLAS VLRAFQREHP
121 EVQVTVHGTV WADVEADVSD ISITIHHVDD IPEGALQLWS ETLALVCAPG FEVEGAPLTT
181 PTQLGQARRI EVMGRPAYWD LVAQNFGLPG FEMAGGPKTD VSTLAAELAA QGAGCAVLPR
241 VLVRPYLERG ALVEPFATEI ANPWAYCARF KARTPAPSVR LFRSWLLEAA ARVGEGD
SEQDB ID: 3101377JF
Reference:
3101377
Name: aminomethyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTHAQAVVI GGGLVGCSIL YHLAKLGWRD VVLLERDELT SGSTWHAAAN IHGLHDNNNV
61 TRIQHYTMNL YKELEKETGQ GCGVFQAGSL YLAQTEAREH QLRLQEAKAR YYGLNFYEID
121 KDRAKELHPL AQFDDIRCIM YEPDGGNVDP SGVTYAYAAG ARAMGATIER FCPVIGTEPQ
181 PDGSWIVRTE KGDIHTQWVV NAAGLWGREV AALAGITLPL QPTEHQYFVT EAIPEVAALG
241 RRLPSIADRD GEYYFRQEGN GLLIGAYEKD MKFWAENGTP LDFAHDLFPD DLDRIMENVI
301 RATERVPVAA TAGVKRVING PMIWSPDSSA LWGPVPELRN YFVCGGIIPG FSQSGGLGLL
361 AAQWMIEGEP QNDMFAWDLA RFGDWADKTF TKARVQDQYT HRFAIHFPNE ERSAGRPARV
421 RPAYEMQQQM GAVFGMNCGW EHPLWFADQP GVSETVGFTR QNWWEPVGRE ARMLREQVGV
481 IDISNFANYE IKGPGAHDWL DRLVANRVPT VEGRSCLTPL IGVRGGIAGD FTITMTGEDA
541 YMMVGSGMAE RYHQRFFNMV DLPEGTTCEV ATNRIAGYNV AGPRAREMLQ RLTNADLSNA
601 GFPFMRSATI EVAGVACLAI RVSFTGDLGC ELHCAEGDQV RLYTALIAAA REVGGGPVGS
661 RALGSLRIEK GYGSWGREYS PEYWPQEVGL DRLIKADKDF LNKAAWLKIK DYPVREVLSV
721 FEIEAVHGAD ASGGEPIFTP DGRPAGRVTS GAYGYSVGKS LAIGFVNPAV AQPGDVLEVF
781 ILGKPHRAVL LAEPPFDPAG ARLRG
SEQDB ID: 3101377JG
Reference:
3101377
Name: Na/Pi-cotransporter family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQEGFRRAGL KNTGLPPCPS LARLRVRGAQ EMAGNLYFLI GGIGMFLLGM ELMTAALRDT
61 AGSRLRGVLT RFTTTPLRGV MTGAAATAVV QSSSATTVMT VGFVGAGLMT MPQALGILYG
121 ANIGTTATGW LVSLLGFKLK LGNLALLLLF PAALADLLAR GPLARAGRTV AGLCLLLIGL
181 DLMQSGASDL TAYLTPESLP GSGMGGLLLL VGLGATVTIV MQSSSAAMAL ALVMLSGGAI
241 TLLQAAAIVI GMNIGTTFTA VLASTGGSVP MRQTALANLI FNIVTSVLAF PLLLLLRPVF
301 ESAAGLGDDL SVLLLFHTGF NLVGTALFLP LTGCFAGLVA RLLPERESDQ LFVPDRSLLK
361 DANAALLAAQ SGTRTVAERM FSALGAGLAP APDYRPIAAL TPCVRALEDL RAFLSEIRLP
421 PDRAQDIETF SDILHQIDHL TRLLDRARQT GNIDTLLHDR LLRRSALGAG AALRRSGAAL
481 GALPEGMRLE RLRHLIGARR KRHRRAMMLG EHVGLFSLDQ VFAHTDAMRW LDRVLHHAER
541 VAHYHRAAAA RLPAADAPPR AETG
SEQDB ID: 3101377JH
Reference:
3101377
Name: 3-isopropylmalate dehydrogenase, Class: EC1.1.1.85
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuB
Sequence:
1 MSNPSLLILP GDGIGPEVMA EVRKIIGWFG DKRGLNFDVS EDLVGGAAYD VHGVPLADET
61 MAKAQEADAV LLGAVGGPKY DDLDFSVKPE RGLLRLRKEM DLFSNLRPAQ CFDALADFSS
121 LKKDIVAGLD IMIVRELTSG VYFGEPRGIF EEGNERVGIN TQRYTESEIE RVARSAFELA
181 MRRSKKLCSM EKANVMESGI LWREVVTRVA KDYPEVELSH MYADNGAMQL VRAPKQFDVI
241 LTDNLFGDIL SDCAAMLTGS LGMLPSASLG APMANGRPKA LYEPVHGSAP DIAGQGKANP
301 IACILSFAMA LRYSFDQGAE ADRLEAAVEQ VLADGVRTAD LLGTEGVTPV STTEMGAAIL
361 AKLDASL
SEQDB ID: 3101377JJ
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDELSDIGDW SLIQSFLAVA ETGSLSAAAR QLDRSQPTLG RHVQALEQAL GLSLFDRHAR
61 GLKLSADGAR ILPLAQQAHR AMTAISVTAA GQSQSLAGTV RITASVFASH HILPPILADI
121 RAAEPAIELE LVPSDTTENL LFRAADIAVR MYRPRQVDIV ARHIGDVPLC ACAATSYLER
181 KGRPTRAEDL LDFDLVGYDA DPIIVKTMQA LGWPVTRHSF AMRCDNQSAY WQLIRAGCGI
241 GFGQRSIVAA DPLVEVLPFE LPVPPLEMWL AAPQAMRLTP RIRRVWDLLA AGLLAAPL
SEQDB ID: 3101377JK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNAYLSMNSD WRASMTQTVL VLGASGRFGR NAAEAFGRAG WTVRQFDRKR DDLDAAARGA
61 DVIVNAWNPP YPDWAATVPG LHARVIKTAQ ATGATVIIPG NVYVFGADTP APWGPDSPHA
121 ATNPLGRIRI DMEAAYRASG VRTILLRAGD FLDTCASGNW FDQVMIKRLD KGRFTYPGNP
181 DIPHAWAYLP DLARATVTLS ERRETLPVFC DLTYPGYTMT GRQIATGLEQ VTGRRVALKR
241 MNWLPLHLAR PVWSLAGSLL EMRYLWNTPH SLDGAAFAKV LPEFVQTPFE QALASAIPAR
301 LLAAQVHPDQ AVAAGL
SEQDB ID: 3101377JL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRLAALVLC LLPVAAAAEV LRVATFNTEL SRKGPGLMLR DIAGGRDTQV AAVVSVIASA
61 RPDILALQGL DWDHEGRALD ALAAQLAAAG WEMAHIFAAQ PNSGRATDLD LDGDRRIGGP
121 GDAQGYGRFT GQGGIAILSR HPIAQAEIQD FSALRWRDLP GATLPESGGH AFPSEAAQAA
181 QRLSSTGHWL VPIDTDMGRM VLLTYQAGPP VFDGPEDRNG LRNRDETRFW QLLLDGVVGA
241 MPDLPFVLAG GANLDPQDGE GYRGTIRALL ADPRLQDPAP ESSGAARAGP QGHAGPDARD
301 TVDWPGIGRF RVDYVLPSTH WRVVGSGVVW PAPDDPSAGP VSEASRHRLV WVDLSRQ
SEQDB ID: 3101377JM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIARISGAAL RGFLVALVVV IPALYLPSAA TTATEIVVLL AILAFVLTFA EYNSTFPSFI
61 EFRDAPPLNR MRFIALLTMI TFLTLICKER VEPTNITALF SGFGLLIAHI ADFPYSPVRL
121 VVLMLPVGAA PELIYDVRVT AAVAYVIALL TVVAFWFAVR VRGWPTANGA FNVWINLPLF
181 DPTTGGDVVA RLQRDGRINM VLGVLLPFLI PAMIKMASDL FDPINLYSAQ TLIWTMSAWA
241 FLPASMIMRG LAMMRIAELI EEKRRRVYSN AEAMQTA
SEQDB ID: 3101377JN
Reference:
3101377
Name: 3-isopropylmalate dehydratase, Subunit: small, Class: EC4.2.1.33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuD-1
Sequence:
1 MEKFTKIQGI AAPMPLVNID TDMIIPKVFL KSIQRTGFGK NLFDEMRYNR DGTEIPDFVL
61 NKPQYRDAEI LVAGDNFGCG SSREHAPWAI ADFGIKCIIS TSFADIFFNN SFKNGILPIV
121 LPQEQVDILM KDAEKGANAR MTVDLEAQEI TTSDGEVIPF EVDAFKKHCL LNGLDDIGLT
181 MEKAAAIDTF EAQAAQARPW V
SEQDB ID: 3101377JP
Reference:
3101377
Name: 3-isopropylmalate dehydratase, Subunit: large, Class: EC4.2.1.33
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuC-1
Sequence:
1 MSPKTLYDKI WDAHLAHEAE DGTCLLYIDR HLVHEVTSPQ AFEGLRMAGR KVRAPEKTIA
61 VPDHNVPTTE GREDPAQMTE ESRIQVQALD KNAREFGVHY YPVDDIRQGI VHIVGPEQGW
121 TLPGMTVVCG DSHTATHGAF GALAHGIGTS EVEHVLATQT LIQKKSKNMK VEITGKLNPG
181 VTAKDITLAV IGATGTAGGT GYVIEYCGEA IRDLSMEGRM TVCNMAIEGG ARAGLIAPDQ
241 TTFDYVKGRP HAPKGAQWEA ALAWWKTLYS DDGAHFDKIV TLKGEEIEPV VTWGTSPEDV
301 LPITGVVPSP EDFTGGKVEA ARRSIEYMGL TPGQKLTDIE IDTVFIGSCT NGRIEDLRAV
361 AEVVKGKKIK SGLRAMVVPG SGLVRAQAEE EGIADILKDA GFEWRLAGCS MCLAMNPDQL
421 APGERCAATS NRNFEGRQGY KGRTHLVSPA MAAAAALTGK LTDVRELI
SEQDB ID: 3101377JQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGLSRQTQD LARLRADMYL DSMTPHDAPS MDLQDRARLR ERFFGATRSV LARL
SEQDB ID: 3101377JR
Reference:
3101377
Name: mechanosensitive ion channel family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSEDILPATL DELIATLLTE GHRLVGLFLT PGWRQYQLLI IVLLIGAALL LSLLTRTHWE
61 AWARSRAGWP KWRLRTLVLL MRRLSLLYFV VLSWMTYLVM QQMTWPSRSY VIGVVATLAT
121 ALLVIALVAR AVRNRTIRLV FRWSMWVYAT LVALNLTDDV ARFLDGISIE IGALHISVLG
181 VMKAVLLVGA LLVLVRLASQ GASNALARND DISPSMQVLL AKAVQVLLYG WVFIVAIRTL
241 GFDLTGLAFL SGAIGVGIGF GLQKVVSNLI SGIIILMDRS IKPGDVISLG ETFGWINALG
301 ARYVSVVTRD GREYLIPNED LITSQVVNWS HSDQYVRLDL NFGTSYGDDP HKVRAVSIAA
361 ARSVGRVLSG SGRDPVCHIV GFGDSSVDYV LRFWITDPTA GLTNIRGNVF LALWDAFQAE
421 GISIPFPQRE VRMLENEGGL PQFAGQGGAD
SEQDB ID: 3101377JT
Reference:
3101377
Name: iojap-related protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAHAGAKMM AQGTYTSEQL LDRILTSLND DKAEDLVQID LRGKTSMGDY MVIASGRSTR
61 QVSAMAEKLV QRLKDEFGLN SKIEGKDAGD WVLIDTGDVI VHIFRPEVRE FYQLEKMWMP
121 QGAKTSAN
SEQDB ID: 3101377JU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRVSILAVGR LRTGPEKSLI DDYLTRFDRT GRALGLGPAR VVEVEDKKNA GMGAEAALLR
61 KALPAGAVLC TLDERGKQLS SPDFADRMAG WRDTGRQDLA LVIGGADGID PSLRAEADFS
121 ISFGAMVWPH MLVRVMLAEQ LYRAATILAG SPYHRV
SEQDB ID: 3101377JV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAELLIVYHS RTGGSRQMAE ACAAGAQSEI ATTLLTAEAA GPEDLLRASG YVFCCPENLA
61 AISGAMKEFL DRCYYPVLGR IEGRAYAQMI CAGSDGQNAA RQLARIATGW RLKEVQPPLI
121 LCTHAQTPEA IQAPKHIPEA ELGQCRDLGQ ALGAGLAMGM F
SEQDB ID: 3101377JW
Reference:
3101377
Name: Ala dehydrogenase, Class: EC1.4.1.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ald
Sequence:
1 MKIGCPKEIK PQEFRVGMTP NAAREAVSHG HEVIIETNAG AGAGFDNADY VDAGARIVDT
61 AAEVFATADM IVKVKEPQAI ERKMLREGQL LFTYLHLAPD PDQTHDLLAS GATCIAYETV
121 TDRNGGLPLL APMSEVAGRL APQVGAWTLQ KANGGRGVLM GGVPGVGPAK VLVIGGGVVG
181 THAAKIAAGM GADVTVLDRS IPRLRYLDDV FGGTFKNSYA SAGNTIELAR QADMIIGAVL
241 IPGAAAPKLI SRAQLSELKP GAALVDVAID QGGCFETSKA TTHQDPIYEV DGIMHYCVAN
301 MPGAVARTST IALGNATMPF MLALADKGWK QACADDVHLL NGLNVHAGKL TYAAVGEALG
361 LDVVSASQLV Q
SEQDB ID: 3101377JX
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLDATDRKI LTALQAKGRM SNAELSDKAN LSPSACHRRV QRLEAEGYIR NYVALLDARK
61 MGLPTTVFVE ITLQGQADEV LDAFEKAVAR IPDVLECHLM AGTADYILKV VAENTEDFAR
121 IHRQHLSRLP GVAQMQSSFA LRTVFKTTAL PV
SEQDB ID: 3101377JY
Reference:
3101377
Name: polyphosphate kinase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTHESDDPSL DWLEAELEDS LDEDFEIEFS EPMLSMEIRR IYKDQRPDLL DRQVYFRNLL
61 RLQAELIKLQ DWVQHTNSKV LIIMEGRDAA GKGGVIKRIT QRLNPRIARV VALPAPSRRE
121 QSQWYFQRYV PYLPSGGEMV LFDRSWYNRA GVERVMGFAT EDQVEQFFQD VPEFERMLVR
181 SGIILLKYWF SITDEEQQLR FLMRVHDPMK QWKLSPMDLE SRIRWEQYTK AKEQMFSRTN
241 IPEAPWYIVE GNDKKRERLN CIEHLLSKIP YEDIPHEKVT LPDRRYNPDY ERQVLPDELY
301 VPKVY
SEQDB ID: 3101377K
Reference:
3101377
Name: cochaperone, Isotype: GrpE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: grpE
Sequence:
1 MAKPNNEEFL DDIATAEAEE LAEEMAEISD EAAELDTLRA ERDAFKDKFM RALADAENVR
61 KRGERARREA EQYGGSKLAR DMLPVYDNMK RALETVTDEQ RAVSGALIEG IELTMRALLD
121 VFGKHGIQVL SPQVGDRFDP QMHEAMFEAP VPGTKAGDII QVSAEGFMLH DRLLRPAQVG
181 VSSMPAG
SEQDB ID: 3101377KA
Reference:
3101377
Name: transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDDLSDDLF LVHPDGTPNG PAAATLSFTR SPTVLLTFAG NRFTRAAARH YQTEFGIGAM
61 DWRMLVMLTR EPGSSVSHAA RTIGIDKAAV SRSLHRLDAL GLARAEDGNE RRRHWTLTKA
121 GRQMHARILD SALDRQRRLL DGFTPEEVDA FTTYLRRILI NIETLGATDP
SEQDB ID: 3101377KB
Reference:
3101377
Name: cytochrome P450 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTRTPQNTH CVDMTTGSRA MSDAPVYEID LAAFWADPYP DLKRMRAEAP IAYVPQLGAT
61 LITRRDEIFA QEKRIEIFSS DQPQGLMTVL MGQNMMRKDG DAHMAERKAI FPTVSPKTVK
121 QVWVAQFRAA AQRVLDDLAP RGACDLVRDY AMPVSAEALK AITGLTNMTA AEMDRVSQGM
181 IDGCANYAGD PLVEARCHDC TASIDAHIDA MIPVLDARPD HSLLSVQRRA GLSDAQTRAN
241 IKLAISGGQN EPRDAIAGTA WAVLSHPDAL ARLQSGAVPW LRAFEEYARW ISPIGMSPRR
301 VAQRATVQGV TLEPEDRVFL MFGSGNRDES VFANPDRFDL DQDIAPAISF GAGPHFCAGA
361 WASRALIGEV ALPLLFERLP GLALDGEARF GGWAFRGPIT VPVRWEPAPR EG
SEQDB ID: 3101377KC
Reference:
3101377
Name: PaxA protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQASTLERE MLELINNERT SRGLNPVTLE LKLNDASEDH SKWMLERDVF SHTGVNGSSP
61 GDRIEKTGFK FEGNSIWAEN IAWQSERGAP GLSDDVKNLH ESLMNSPGHR ANILNPDVTL
121 VGIGIERGNF EGYDAVMVTQ NFARTAAEVE LDTGAPTPEP EPKPEPEPKP EPEPKPEPEP
181 KPEPEPKPEP EPKPEPEPKP EPEPKPEPEP KPEPEPKPEP EPKPEPEPKP EPEPKPEPEP
241 KPEPEPKPEP EPKPEPEPKP EPEPKPEPEP ENACEGSDGS DLIFTDDTGG AAHGKGGNDI
301 MIGGRGMDIF WGDGGQDILI GGRGMDKLSG GDGDDVLLGG RGKDMLDGGA GNDLLIGGRG
361 KDALDGGEGD DHMLGGAGAD TFHFSTGKDV VFDFGVRGQA DLVDLGKADG IADFDDLKAN
421 HLSEVDGDAV ITDAAGNSLT LLGVQMDMLD AQDFLF
SEQDB ID: 3101377KD
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPGHWAGRR TANPPFQPPA ERRARPTRLL AENRSLVTAP GRFATPLSPP DKTGDSIRGE
61 MERRQGKDTM TAADPNLSAG ADQPEGATTL TGILFLLLAT TIFPIQDVII KSLSSEFAVH
121 QIVFWRSVFA LPIAAAMALY EGSLWPWKIG SWPLQLTRAV AAFSSYLVYY MALAAIGLAE
181 TAAITFSTPI FVTLLAAVFL GEKIGLWRWL AVFLGMAGVL VIVQPGASVF EPAALLALAA
241 ALFYAISIIA TRRLGNRTNG GTMTLVTLLV YIVGGTVLGL VFSGLETASP HPSLAFLYRD
301 WIAPAPMDWL ALAALGVTSG IGFFALSQAY RMAEASVVTP FEYTYLPWAV LWGYLVFGVL
361 PVMSTWIGLT LIVGSGLLIL FRETMRGRRI VRRRGLGVMR QR
SEQDB ID: 3101377KE
Reference:
3101377
Name: ribosomal protein S21
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsU
Sequence:
1 MQVSVRDNNV DQALRALKKK LQREGVFREM KLKQHFEKPS EKKAREKAEA IRRARKLARK
61 KAQREGML
SEQDB ID: 3101377KF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSPTYEEARN HLLDAALTHV AFDGWTEETF RAAAAETGLD MDFARAICPR GAVDLALTYH
61 ARGDAAMVER LAAAELSELR FRDRIAAAVR FRLEAVEDKE AVRRGVTLFA LPAHAGEGAK
121 AIWQTCDVIW SALGDSSEDV NWYTKRATLS AVYSATVLYW LGDETPGHEA TWEFLDRRID
181 NVMQFEKFKA DVQKNPLLKP LLAGPNWLFA QMRAPRDKGD LPGSLG
SEQDB ID: 3101377KG
Reference:
3101377
Name: Zn alcohol dehydrogenase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQQMRAVEI SRPGGPEVLQ LTQRPRPEPG HGQVLIKVAY AGVNRPDALQ RAGAYDPPPG
61 ASDLPGLECS GEVVAVGPGA EDVAVGDKVC ALLPGGGYAD YVVTPAAHCL PVPQGMALRE
121 AACLPETFFT VWSNVFTRGG LKAGERFLVH GGSSGIGTTA IQLAHAFGAR VFATAGSDDK
181 CRACLDLGAE RAINYRDEDF VKVMRSEGGA DLILDMVGGD YIPRNVKALA EDGRLVQIAF
241 LQGPVVELNF ALMMVKRLTL TGSTLRPQSD LAKADIARDL REAVWPLLDA GRIAPVMDSE
301 FDLGDAAAAH ARMESSGHIG KIVLKVG
SEQDB ID: 3101377KH
Reference:
3101377
Name: quinone oxidoreductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETARTVVI EGFGGPEVLQ LRDLPVGEPG PGELRIRHQA CGLNFIDVYQ RTGLYPLALP
61 HALGMEAAGI VEAVGEGVTH LKPGDRAAYA ATPPGAYAQA RVMPAAQVCP LPDEISFDQA
121 AAMMLKGLTV DYLFHRTTPL SRGDTVLFHA AAGGVGLIAC QWAKAEGITL IGTAGSDEKC
181 ALAKAHGATH VINYRTENFT DRVRELTDGK GVDVVMDSIG ADTFEGSLDC LKPLGMMISF
241 GNASGPVPPV NIGMLGQKGS LKLTRPTLFT HISDHAACQA MARRLFGKVT GGEVKIRIDQ
301 RFPLDQVADA HRALEARQTT GSTILEL
SEQDB ID: 3101377KJ
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQLDRQIVA ALQHNAREST TKIAARLGVA RTTVHERITR MESRGVIAGY SVVLREPQDE
61 SKVQVVVLLE VQQKETTRIV KRLEAYPEIK LCLSINGEYD LLLSAEAPRI EDLDILVDEV
121 GAIPGILRTN TFVVFGRRID RT
SEQDB ID: 3101377KK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRWNICVVGA GKIGQMIAAL LKTSSNYSVT VADHDLAALA VLNRMGVATK QVDAKDEAGL
61 AKALGGFDAV ISAAPFFLTP IIAKAAKAAG AHYFDLTEDV AATNAVRALA EDSQTAFMPQ
121 CGLAPGFVGI AGAALAAEFD EIDSLHMRVG ALPLYPTNAL KYNLTWSTDG LINEYCNPCD
181 AIVNGERVKT APLEDYEILG HDGVEYECFN TSGGLGTLPE TLDGKARSVS YRSIRYPGHR
241 DILRLLLNDL GLERRRDLLK DIFETALPRT DQDVVLVYCT AKGRIGGQLR EKSLINKSYS
301 RVIDGQVWSA IQVTTAAGVL GVVDLMRAGT LPAKGFVRQE QVKFADFLET EFGRLYRAGD
361 LTAQNKAA
SEQDB ID: 3101377KL
Reference:
3101377
Name: aldehyde dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKDIVMTAET VMQQLGLGAA DLTGGSIRVT SPIDGRVLGE VHETPLSEMA AVLDRAKSAF
61 KIWRSVPAPR RGELIRLLGE ELRASKEALG ALVSWEAGKI TSEGLGEVQE MIDICDFAVG
121 LSRQLYGLTI ASERPGHRMM ETWHPAGPVG VISAFNFPVA VWSWNAALAI VCGDPVIWKP
181 SEKTPLTALA CQKIFERALA RFGDAPDGLL QTLIGGADLG RTLVESEDVP IISATGSTRM
241 GRAVAPIVAA RFGKCILELG GNNAMIVGPS ADLEMAVRAI VFSAVGTAGQ RCTTLRRLIA
301 HNSIKDELVA RLKKAYAGLP IGNPLAEGTL IGPLVDEASG NAMTDALKSA KAEGGMVFGG
361 ARVSEGVPAG GVYMQPAIVE MPAQSATVKT ETFAPILYVM GYDSFEEAVH IQNDVPQGLS
421 SCVFTLNMRE AEQFLSASGS DCGIANVNIG PSGAEIGGAF GGEKETGGGR ESGSDAWKAY
481 MRRQTNTVNY SAELPLAQGV KFDI
SEQDB ID: 3101377KM
Reference:
3101377
Name: glycerophosphoryl diester phosphodiesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNGFSQLEGL RGHPSVVRVI GHRGARGVMP ENTLEGFAFT LAAGVRALEF DVVMTADGVP
61 VVTHNHHLAN AMTRDGQGHW LTGAERQVAE MTYAEIRALD VGGLDGRTVY GRRFPDQAFL
121 TGIHVPRLGE LLDLCAGYGD QAPYLLLELK SDPALMHDHA ARAEMVAAVL ADVRRYRMEP
181 RTVMHSFDWA LLGECRRQAP DLPTSYLSQL PENADDPGED SAKPVGPDYD RMTESLPQAV
241 ASAGGQLWCP YFLDVTPELV AEAHDLGLIV LTWTVNEPED IRRMATTGVD GIVTDYPGRT
301 QRILIDMGLS WT
SEQDB ID: 3101377KN
Reference:
3101377
Name: sn-glycerol 3-phosphate ABC transporter, Subunit: ATP-binding, Class: EC3.6.3.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: upgC
Sequence:
1 MASITLDNLV KAYGDTEVLH HVAGQIEDGE FIVIVGPSGC GKSTLLRMVA GLETVTAGQI
61 SIGDRVVNQL EPADRDIAMV FQNYALYPHM SVRENMAYGL KIRKISKDEI ARRVEEAADI
121 LELRPYLDRK PRQLSGGQRQ RVAMGRAIVR NPQVFLFDEP LSNLDAKLRV QMRLEIRKLQ
181 QRLGVTSIYV THDQVEAMTL GDRLMVLNGG YVEQFGTPIE LYDRPATTFV AGFIGSPAMN
241 FLPATAAEGS VTLANGARIA GSGTAHGTVT LGLRPEHLLP DEGGPVRVRV ELVEQLGANS
301 LLHGQLEGTD TEMVVSMPGH MSAAADAVMA FTPTADSLHL FDPETGKRIA E
SEQDB ID: 3101377KP
Reference:
3101377
Name: sn-glycerol 3-phosphate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ugpE
Sequence:
1 MVENRPILNV ITHLVLILGI VIVALPIWIT FVAATHDAVR MTQAPIPMLP GTHFWENFTQ
61 TLFGSGLSGT ETAPVWRMLL NSLAMAMMIA LGKIAISLIS AFAIVYFKFP FRMFFFWLIF
121 VTLMLPVEVR ILPTFEVVAD LGMLNSYWGL SIPLIASATA TFMFRQVFLT IPDEMLESAR
181 IDGAGPLRFF WDILIPLSRT NIAALFVILF IYGWNQYLWP LLITTDTDMT TIVMSIKQML
241 EAAEQSPQWN IIMMTALLAM LPPVFVVVAM QKLFVQGLTE TDK
SEQDB ID: 3101377KQ
Reference:
3101377
Name: sn-glycerol 3-phosphate ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ugpA
Sequence:
1 MPRRFRPRGN ENPMLKRVHF PSSLLPYLLV APQILITLVF FIWPASQAVY QSFLIEDAFG
61 LSTEFVWFEN FELLIEDAQY LQSFGRTILF SAAVAVLSMG SALILAGFAD RVVRGATTYR
121 TLMIWPYAVA PVLAGALWVF MFNPTLGIFP FLLDMVGIDW NHYLNGTQAM TLVIFAAAWK
181 QIAYNFLFYL AAMQSIPRSL IEAAAIDGAG PVRRFVDHIF PLISPTTFFL LVINAVYAFF
241 DTFGIIHAVT QGGPANSTTI LVYKVYNDGF VGLDLGGSAA QSVILMILVI AMTVVQFRFI
301 ERKVEY
SEQDB ID: 3101377KR
Reference:
3101377
Name: sn-glycerol 3-phosphate ABC transporter, Subunit: periplasmic sn-glycerol-3-phosphate-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ugpB
Sequence:
1 MIAFIKLLLE LFFPLRNHPP VHEPREVDMT CKFLTLSASA LVLTTGMAFA QTEIQWWHAM
61 GGTNGERVDK IAADFNASQS EYKVVPTYKG NYTETMTAAV AAFRAKEHPH LVQVFEVGTA
121 TMMAAKGAIY PVEQLMSDAG EPFDKSDYLP AVISYYQTSE GELLSMPFNS STPVLWYNAD
181 ALKAAGVEVP KTWDDMKTAA KALVDSGMDC GFSFGWQSWV MIENYSAWHN IAMGTKENGF
241 AGFDTELSFN NDEVTARLDD IAAMSEGNLF KYGGRRGDSL PMFTNGECGM WMNSSAYYGS
301 IKGQAQFEFG QTMLPLDSAV ADAPQNSIIG GATLWALAGH EAEEYKGLAK FMTYLSSPEV
361 QAWWHQETGY VPITTAAYEL SKEQGFYDSN PGTDTAIQQL SLNTPTANSR GIRFGNFVQI
421 RDVINEELEA LWAGDKTAAQ ALAAATERGN ALLRKFERSA N
SEQDB ID: 3101377KT
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNFKLRQLEA FRAVAQTGSI TRAAQQLGIS QPAASRLLAD FSASVEFPLF VREGGSMSPT
61 PESRYMLAEI NRVFEGLAHL EELRHNLKDR TAGHLRIACL PGFATSHLPR VLTAFLKDRP
121 GVTVTLEPDR PERILEWIVG QQYDCAITDG FAGHPATEST DIAIRTVCIL PPGHPLSDRP
181 EITPHDLRGE KIIHSRRDSP FFRRLAQAFT DSEVELSSWI EVRQFTTACT IVAEGQGAAV
241 LSALDAEQYR DRGLVIRPFV PRIAHRLSLL RPVTGSLSPL VLDFLEAFTA SLAPFIDHEE
301 RRANPVGAR
SEQDB ID: 3101377KU
Reference:
3101377
Name: 1-deoxy-D-xylulose 5-phosphate synthase, Class: EC2.2.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dxs
Sequence:
1 MSDRPHTPLL DQVTRPADLK RFSDAQLTQL AGELRAETVS AVSVTGGHLG AGLGVVELTV
61 ALHAVFDTPR DKVIWDVGHQ CYPHKILTER RDRIRTLRMK DGLSGFTKRS ESPYDPFGAA
121 HSSTSISAAL GFAVARDLGG VTPEGLGDAI AVIGDGSMSA GMAFEAMNNA GHLKKRLIVI
181 LNDNEMSIAP PVGALSNYLS RLYAEEPFQE LKAAAKGAVS LLPEPFREGA KRAKEMLKGM
241 AVGGTLFEEL GFSYIGPIDG HDMGQLLPVL RTVKARATGP ILLHVLTKKG KGYAPAERAR
301 DRGHATAKFD VVTGEQKKAP SNAPSYTAVF GKALVDQAAR DDKIVAVTAA MPDGTGLNLF
361 AERYPSRCFD VGIAEQHGVT FSAALAAGGL KPFCAMYSTF LQRGYDQVVH DVAIQRLPVR
421 FAIDRAGLVG ADGATHAGSF DIAYLANLPG MVVMAAADEA ELVHMVATAA AHDDGPIAFR
481 YPRGEGVGVE MPELGKVLEI GKGRMIQKGA RVALLSFGTR LTEVQKAAEA LAARGITPTI
541 ADARFAKPLD RDLILNLAHD HEALITIEEG AVGGFGSHVA QLLADEGVFD HGLKFRSMVL
601 PDIFIDQSSP ADMYAVAGMN APQIEAKVLD VLGIGRIGEK RA
SEQDB ID: 3101377KV
Reference:
3101377
Name: farnesyl diphosphate synthase, Class: EC2.5.1.10
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispA
Sequence:
1 MFHERLAQDA ALIQRSFDTV LGALEPLDIT RAMAWTTEGG KRLRGFLVLE SARLHDVDEA
61 RAIWPATAIE ALHAYSLVHD DLPCMDDDDL RRGRPTAHVK WDEGTAVLAG DALHSLAFEL
121 CTRPEVGTAE TRATLALTLA QAAGARGMVL GQALDIAAET APKPLTLDQI TRLQAGKTGA
181 LIEWAAAAGA VLAGADPDPL RQYARALGLA FQIADDILDV EGDAEKAGKR LQKDAGAGKA
241 TFVSLLGLDA AKARARDLVD QGCAALDGYG ERAGTLKEAA RFVIARDN
SEQDB ID: 3101377KW
Reference:
3101377
Name: exo-DNase VII, Subunit: small, Class: EC3.1.11.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: xseB
Sequence:
1 MSFEQAMKEL ETVVGQLERG DVALDQSIAL YERGAALKKR CEDELKRAEE KVAAITLDSN
61 GQPTGTKPVE GL
SEQDB ID: 3101377KX
Reference:
3101377
Name: histone deacetylase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTALITHAD CLTHVTPTGH PERVARLEHV LHALEPLDLR RVTAPLAAED DLLRIHPAGY
61 VADIRDARPD EGFAQIDGDT FLSPGSVDAA FRAAGAVVRA VDMVLGGEAQ NAFCAIRPPG
121 HHAERETAMG FCLFGNAALA AKHALDHHGL RRVAVVDFDV HHGNGTQDLL WDEARALLIT
181 SQQMPLWPGS GRPDEDGAHG QIVNIPLAPG TGGAEMRAAY MAQAFPRLRA FKPELIIISA
241 GFDAHQDDPL ANLNWSTADF AWLTAELCAL AQELCQGRIV STLEGGYDLN ALAAATRAHV
301 QELIKAAT
SEQDB ID: 3101377KY
Reference:
3101377
Name: DNA-binding response regulator, Isotype: PetR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: petR
Sequence:
1 MSAFDAHLLI VDDDERIRDL LKKFLMRHGF LVTAARDAEH ARRILSGLDF DLIVMDVMMP
61 GEDGVSLTRA LRQTLSTPIL LLTARGETEH RIAGLEAGAD DYLAKPFEPR ELLLRINAIL
121 RRVPDTSAQD AAPKFLQLGP IRYDIERGEM WQGDQLVRLT ATENQLMKIF AARPGEAITR
181 TKLVEDLGRD RGQAQERAVD VQITRLRRKI EPNPKQPRYL QTVRGAGYML APD
SEQDB ID: 3101377L
Reference:
3101377
Name: DNA mismatch repair protein, Isotype: MutS
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mutS
Sequence:
1 MTTVTPMMAQ YLEIKEAYAD ALLFYRMGDF YEMFFDDAVA AAEALDIALT KRGKHEGEDI
61 PMCGVPVHAA EGYLLTLIRK GFRVAVCEQM ESPAEAKKRG SKSVVRRDVV RLVTPGTLTE
121 DALLEARRHN FLVAYAEVRS GAALAWADIS TGDFHVMPVT RPRLSPELAR LAPSELLVVD
181 EPVFQQLRPL ADDHRIPLTP LGKASFDSMA AEKRLCELYK VGSLEGFGTF ARAELSAMGA
241 LIDYLDITQK GKLPLLQPPV QEAEDRVMQI DAATRRNLEL TRSLSGERGG SLLSVIDRTV
301 TPGGARLLEQ RLGSPSRNLD VIHARLSALD FCIDHSTLAA DLRAALRKTP DLDRALSRLA
361 LDRGGPRDLA AIRNGLGQAE AIAALCDGLE LPGLIAGACA DLNGFDELLG LLDTALVAEP
421 PLLARDGGFI APGYDSDLDE ARELRDKGRG VIAGMQQKYA EHTGIASLKI KHNNVLGYFI
481 ETTATHAAKM LNPPLSETYI HRQTTANQVR FTTVELSELE TRILNAGNHA LEIEKRLYSS
541 LSGAVLEQAA RLNIAARGLA ELDLATALAD LARAENWCRP SVDPSRAFAI EGGRHPVVEH
601 ALRRQGGDPF VANDCDLSAD KGAAIRLLTG PNMAGKSTYL RQNALITLLA QIGSYVPADS
661 AHIGVVSQLF SRVGASDDLA RGRSTFMVEM VETAAILNQA DDHALVILDE IGRGTATYDG
721 LSIAWATLEH LHATNRCRAL FATHYHELTA LAATLDGVEN LTVAVKEWEG EVIFLHEVRK
781 GAADRSYGVQ VAQLAGLPPS VVARARVVLD QLEKSEREGG KQKALIDDLP LFSAAPPLPP
841 PAPKTSPADA MLKEIHPDEL TPRQALEMLY KLKEAAR
SEQDB ID: 3101377LA
Reference:
3101377
Name: transcriptional regulator, Isotype: PetP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: petP
Sequence:
1 MSEARPSPVF GGESLLFLTD EQLRQGIEAM FFAYRGFTAD PDRILAEMAY GRAHHRAIHF
61 INRAPGTTVN NLLAILGVTK QSLNRVLRTL IADGLVESRV GTQDKRERHL FLTEAGAALE
121 AKLSDAQRAR MRAAYKEAGP EAVTGFRQVL EAMMDREMHR AYAKLRDSGS
SEQDB ID: 3101377LB
Reference:
3101377
Name: branched-chain AA aminotransferase, Class: EC2.6.1.42
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvE
Sequence:
1 MASYDDRDGV IWMDGELVDW RDAKVHILTH AMHYASSVFE GERAYNGKIF KSREHSERLV
61 ASAQALDMPM PYTVDQIEAA KEETLKASGL TDAYVRALVW RGSGEDMGVA SARNPVRMAI
121 AVWPWGAYYG DAKMQGAKLD IAEWKRPSPE TIPVHAKAAG LYMICTISKH KAEAKGCSDA
181 LFMDWRGYVA EATGANVFFV KDGEVHTPLA DCFLNGITRQ TVIGMLKDKG ITVHERRIKP
241 EEMEGFEQCW LTGTAAEVTP VGQIGPYTFE VGQMTRDIAA EYEALVRA
SEQDB ID: 3101377LC
Reference:
3101377
Name: organic hydroperoxide resistance protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ohr
Sequence:
1 MEPQMTVSPV YTAHARATGG RNGQAQVAES GLDLVLATPP AMGGNGKGHN PEQLFAAGYA
61 ACYIGAMQFA TTQDKTLAKV PADISVDAEV GIGPRAEGGF GLTVALKVSM PGVDAAEAQR
121 IADAGHAICP YSNATRGNIV VTTEIA
SEQDB ID: 3101377LD
Reference:
3101377
Name: transcriptional regulator, Isotype: MarR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDRALTLDE LLCFSLYSAN HAMGRLYRPL LARFDLTYPQ YLVLVALWQR DGRKVSALGA
61 ELQLESNTLT PLLKRMEAAG LIRRARNPED ERSVIVTLTD KGRGLEGEAA EISNCILAAA
121 DADIAELAEL RDRLHRLTAR LREAG
SEQDB ID: 3101377LE
Reference:
3101377
Name: Cu-binding protein, Isotype: plastocyanin/azurin family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTRRQVCF GAGGAIVGSA LPASGSTPVV VDIRSFVFEP AEITIRAGET IVWINHDFAP
61 HTATDDEVNW DTGELEKDAQ AAIRFDTPGT YPYFCAYHPH MTGTVIVTA
SEQDB ID: 3101377LF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTLTLAAAI AVGFVAQSAS AADKMNDLEI AHTAYTAGQL DIRYAHLALA VSDNAEVRAF
61 AETMIRDHTA VNAAAGDLIT KLNVTPQDND LSRTLVKGAA DKRAELISLS GKAFDCAYAQ
121 NELGYHQVVN KTVEGVFIPA VTVEPLKDLL SDALVTFKVH EGHAEQMVNG LQCG
SEQDB ID: 3101377LG
Reference:
3101377
Name: transcriptional regulator, Isotype: AraC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLDLLSDILT RLSLKGTLYF RTSFTPPFGV HVPSYQNVAR FHFAYRGECM VHVPAANETL
61 RLTQGDLVLI PHGAEHMLMC QHSRPDSALP LDTVLSRSGY RGEGVLVYGG DEEDQDTQLI
121 CGHLTYGMHG RSCPGHTLLE RLPPYILIRD YGEERGVWLE ATLRVIAAEA GRDRMGSDLI
181 ALKMTEALFA QAIRAHLETV SPDDGALAGF ADPNLSRALS AFHREPAKDW TVEGLARIAG
241 QSRTGFAQHF AAKMGMTPMQ YLTSWRMQIA CEGLVDSRLS VADAAELAGY ASEAAFSRVF
301 RKQLGVSPAA YRQQFESAKR QALAAS
SEQDB ID: 3101377LH
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPSGGSTNL IRTPIMSIRF VTRTVHAYLD YPVALALMGL PVILGLGAEN PMALWLSVIT
61 GFAAFVLTLL TDHHLGVWRV LPYKFHLAVD LTVGIVFLLA PSLFGFSGLD ALFYWVNGAA
121 VVTVISLSTP EQKPAM
SEQDB ID: 3101377LJ
Reference:
3101377
Name: alkaline phosphatase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLLRPSRR AFLAGGTAFT ATLAMPSISR AASRPVFTHG VQSGDVDTMS GMIWTRTDRP
61 AKVMMEVSST ESFADARRLS PMFATPESDF AVKRLVDNLP ADQEVFYRFV AADLDDISAV
121 SEPLMGRFRT APTARRDIRF AWSGDTAGQG WGIDDEGMRT YATMAQHQPD FFIHSGDTIY
181 ADGPMKDEVE KDGAVIWKNT TLIDEKRKVA ETLAEFRGQW KYNLMDEHVQ AMNALCPTFF
241 QWDDHEVVNN WSDAKDLSAD DRYTEKSVHV LQSRAARAFH EMTPLRITPA EPGRVYRKIS
301 YGPMLDVFFL DLRSYRGPNG ASMEDEITDQ SRILGAEQLA WIKRELAAST ATWKVIASDM
361 PIGLIVWDNW KEKAGAEAIS NGDHGPAKGR ELEIADLLRF IKSAGVRNTV WFTADVHYTA
421 AHHYSPERAQ FQDFDPFWEF VSGPLHAGTF GPNDLDRTFG PEVKFVKAPT PEQGVNLPPS
481 MGLQFFGLVD IDAASQQMKV RLMDRGNTEL WSVTLDPVLS AI
SEQDB ID: 3101377LK
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRQAENLSG SLYMVAAMGA FALEDMFVKS ATAVLPVGQV LILFGLGGMG IFALLARWRG
61 EAAFVRPDRT LAIRSSFEVM GRICYTLALA LTPLTSTSAI LQATPLVVAM GAALFLGETV
121 GWRRWVAILI GLAGVLLILR PGMQGFVPAS IFAVLGMIGF AGRDLATRAA RPRLSNAQLG
181 VYGFGALVVS GVLALVWTGG ATLPDAHTAL QLGAAILFGV LAYECLTRAM RRGEISVIAP
241 FRYSRLVFAM ILGIVVFGET PDAATWIGSA IIVAGGIYNI LREGRSRR
SEQDB ID: 3101377LL
Reference:
3101377
Name: cob(I)alamin adenosyltransferase, Class: EC2.5.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: cobO
Sequence:
1 MTDAQDHKEK MKAVQAEHRK KVSEAVDPGR GLVLINTGKG KGKSSAAFGV VIRALGWGQK
61 VAVVQFIKGK WKTGERRFFE EHNLVTWHTM GEGFTWDTQD RDRDIAAATA AFGKARELME
121 SGDYDLVVLD EINIALRYEY LSVDTVLDGL QARSDRTSVF LTGRDAPQAL RDYADLVTEM
181 TVEKHPFEAG IKAQRGVDF
SEQDB ID: 3101377LM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTADSQTCFC VCTMAVTVTN NQAIDLSRAK AQGRAMAKPL TSHRPILAVS LKLGALVLFT
61 SMSALIKVLS ADFPAGEMVF FRSLFAIPVI ILWLLARGEL RQGLIVKKPM GHFWRGVLGT
121 GAMGLTFTGL GLLPLPEVTA IGYATPIFTL ILAALMLGET IRLVRIGAVA LGLLGVLIML
181 WPRLGTGASL DQAATIGALC VLAATVARAF VQIHIRQLVQ VDHAAAIVFY FSLTATLLSG
241 LTAFFGWVTP TPEQAAILIL TGLVGGVAQI LVTSSYRFGQ ASMLAPYDYA SMLFAIIIGY
301 IWFDEWPTLV MLAGAMLVIA GNVVVIWRER QLGLERGKAR SVTDPKG
SEQDB ID: 3101377LN
Reference:
3101377
Name: CaiB/BaiF family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQIASAFGP QGFDVQGEGT WPSRFAVTDL ATRCFGAVGA ALGAVIEARG LGPRPAISVD
61 RRLASLWYSW SIHPQGWQMP GAWDAIAGDY AAADGWIKLH TNAPHHRAAA LSVLGCGAER
121 ATVAEAVRGW QADTLEAAIV GAGGAAAAMR SRAAWLAHPQ GAAVAAEPLV HWATRAGVLR
181 DFGGTRARPL AGLRVLDLTR VLAGPVATRT LAGYGAEVLR IDPPSWSEPG VVPDVTLGKT
241 CAHLDLKQAA DRARFEALLA GADVLVHGYR PGALDALCSP ERRLALAPNL IEVSLCAYGW
301 TGPWAGRRGF DSLVQMSCGI AEAGMGWAGA DQPHPLPVQA LDHATGYLMA AAVLTALARA
361 ARGEGVSAAR LSLARTAELL CGLETGEEGP AITGSTPEDL SDWDEQTSWG PARRLKPALS
421 VEGAEMRWDS AACELGSSPA AWR
SEQDB ID: 3101377LP
Reference:
3101377
Name: auxin efflux carrier family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQILTITFP IYAALAVGFL VVRQGWFSSA DMRVLGRYVM DIALPALLFN AVASRDVAEV
61 FHPGYMLAFA AAGLATVALS YLWFTLTGTE ARRRAVAVMG SSCPNSGFVG YPVMLLTFPD
121 LAGVILALNM LVENVLIIPA CLILTDMARG RGQGGIGQRI AGILWGVLKR PMVIGLLLGL
181 AVSLAGVPVP QTVTRLMQML AASASALALV VIGGSLAGLS WKGSRWHAVQ ISALKLLLHP
241 ALALLAVILV AAIGLPLDPD MGTALILSAA MPMFGIYAVL AQELGHEGMA SIALLTATTL
301 AFFTLSGLLW WLT
SEQDB ID: 3101377LQ
Reference:
3101377
Name: HD domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTTCFCTGAR SGPTVAISAD LHQALRGIVA QRMATDPAHD LAHLDRVWVN VQAIASPGAD
61 RDVLLAASYL HDLVNLPKNA PDRHTASRRS ADEAAPILRD LGFDEAQIAA TGHAIAAHSF
121 SAGISPESEE ARILRDADRL DALGAIGIAR NFSVSGSLGR ALYDPADPFC ERRTPDDALY
181 SLDHWRVKLL SLPQGMLTDK GRALAEARIA LMLRFLDDFA AEIGTPLPEG WTRG
SEQDB ID: 3101377LR
Reference:
3101377
Name: chorismate synthase, Class: EC4.2.3.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: aroC
Sequence:
1 MSMNSFGHLF RVTTWGESHG PALGATVDGC PPGVPIEEAM IQHWLDRRKP GQNKYTTQRR
61 EADEVKILSG VFEGQTTGTP VQLMIENTDQ RSKDYGDIKD KFRPGHADIT YFQKYGIRDY
121 RGGGRSSARE TAARVAAGGL AREAIRALAP NAQITGYMVQ MGPHRIDRAR FDWAQIEQNP
181 FWVPDAQAAS DWADYLDGLR KSGSSVGAVI EVVARGVPAG LGAPVYGKLD TDLAAAMMSI
241 NAVKGVEIGE GMAAAELTGE ANADEIFMGQ NGPQYSSNHA GGILGGISTG QDIVVRFAVK
301 PTSSILTTRK TITKSGEETE IITKGRHDPC VGIRAVPVGE AMMACVILDH LLLHRGQIGA
361 NRGHIG
SEQDB ID: 3101377LT
Reference:
3101377
Name: riboflavin synthase, Subunit: beta, Class: EC2.5.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ribH-1
Sequence:
1 MHDGPPVAPI SSCSGERSLA SSVSFSGRGE IPHRRYAGLD PASPRAAPAH VRGVSRSGER
61 PEPTVTVRMK ENARPGHASA CARPFVIALG DVSKHKEITM THTRYAFIKA NWHADIVDRA
121 LEGFLELIPP EQVDVYDVPG AFEMPLLARD LAQTGRYAAV ACAAFVVDGG IYRHDFVAQA
181 VVDGLMRAGL DTGVPILSVS LTPHQYQETD HHNAIFRAHF VDKGREAARA ALQITATRSK
241 LAQAA
SEQDB ID: 3101377LU
Reference:
3101377
Name: negative transcriptional regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MHPNPAFRGE SVARNLEFAR DRGFGVLAVA VDGAPLISHV PFLVSGDGSE VELHLVRSNP
61 IVQALKSPLP ARIAVSGPDG YISPDWYGVA DLVPTWNYVA VHLAGELDLR PESELPGLLD
121 RLSARFEKQL LPKPAWTRAK MTPGAFDRML RMIVPCRMRV SDVQGTWKLG QNKPEAARMG
181 AAEGVAASTI GTELETLAVL MRGA
SEQDB ID: 3101377LV
Reference:
3101377
Name: glutathione S-transferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLYYSPTSP YVRKVMVLLH ESGQLDDVDL DTAGGTPLAP AEALVGKNPL AKVPALERPD
61 GPTLFDSRVI CAYLDARGGA GFYPDGARRW DVLTLEALAD GMLDAALLIT YEARLRPEDK
121 RWDSWTDSQW DKIARACSAL EERWMAHLSG PLDMGQIAVG CALGYLDLRH DARGWREGHP
181 ALAAWFAGFE SRPSMMATRP PAG
SEQDB ID: 3101377LW
Reference:
3101377
Name: ubiquinol-cytochrome c reductase, Subunit: Fe-S, Class: EC1.10.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: petA
Sequence:
1 MSHAEDHEGT RRDFLYYATA GAGVVTTGAA VWPLVNQMNP SADVQALSSI RVDISGVEVG
61 TQISVKFLGK PVFIRRRTQA EIDEARAVDL SDLIDNDSRN PNLSGGGDGG DENRSLDENG
121 EWLVMMGVCT HLGCVPLGDG AGDFHGWFCP CHGSHYDTSG RIRKGPAPEN LHIPVAEFVD
181 ENTIKLG
SEQDB ID: 3101377LX
Reference:
3101377
Name: ubiquinol-cytochrome c reductase, Subunit: cytochrome b, Class: EC1.10.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: petB
Sequence:
1 MAGIPHDHYE PKTGAEKWLN SRLPIVGLIY DTIMIPTPKN LNWWWIWGIV LAFCLALQIV
61 TGIVLVMHYT PHVDMAFASV EHIMRNVNGG YMLRYLHANG ASLFFVAVYI HIFRGLFYGS
121 YKAPREITWI VGMLIYLCMM GTAFMGYVLP WGQMSFWGAT VITGLFGAIP FVGEAIQTWL
181 LGGPAVDNAT LNRFFSLHYL LPFVIAALVI VHIWAFHTTG NNNPTGVEVR RGSKAEAEKD
241 TLPFWPYFVI KDLVGLAIVL VIFWAIVGFM PNYLGHPDNY IEANALVTPA HIVPEWYFLP
301 FYAILRAFTS EVWVVQIASF VTGGIIDAKF FGVLAMFGAI LAMALAPWLD TSSVRSGKYR
361 PMFKWWFYLL IIDFFALMWL GAMPAEEPYA SFSLIASAYW FGYFFVILPI LGVIEKPLPQ
421 PATIEEDFNA HYGTASDATP AE
SEQDB ID: 3101377LY
Reference:
3101377
Name: ubiquinol-cytochrome c reductase, Subunit: cytochrome c1, Class: EC1.10.2.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: petC
Sequence:
1 MFKKLAIGAA FALALAPVAS HAAGGGEQHI EDFQFSFEGP FGTYDQNQLQ RGLQVYTEVC
61 AACHGLKYVP LRTLGDEGGI GWTDEQVRAY ASETFSVYDP ELEDDRPAIP TDHFPANTGA
121 GAPDLSLMAK ARAGFHGPYG TGVNQLVRGM GGPEYIFSIL TGYEDPPACA PEEMDGYYNV
181 AFAPGGYPDE CKIFDDEGVE IGRKAPGSWI SMAPPISDEQ VEFADGHAND LHHMSADVSA
241 FLMWAAEPKM MARKQAGLVG VIFLTILASM LYLTNKRLWA PHKGKKH
SEQDB ID: 3101377M
Reference:
3101377
Name: NADP-dependent malic enzyme, Class: EC1.1.1.40
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: maeB
Sequence:
1 MPKAKITNEE ALAFHLEPTP GKWEVQATVP MTTQRDLSLA YSPGVAVPCE AIAADPGLAY
61 DYTNKGNLVA VISNGTAVLG LGNLGALGGK PVMEGKAVLF KRFADVNSID IELDTEDPDE
121 FCRAVRLMGP TFGGINLEDI KAPECFIIEQ RLKEEMDIPV FHDDQHGTAV ICAAGLINAL
181 HISGKKIEDV KIVLNGAGAA GIACIELLKT MGARHENCIV CDTKGVIFQG RTEGMNQWKS
241 AHAIKTELRS LEEAMKGADV FLGVSVKGAV TQEMVQSMAD NPVIFAMANP DPEITPEEAH
301 EVRPDAIVAT GRSDYPNQVN NVLGFPYLFR GALDIHARAI NDEMKIACAH ALAALAREDV
361 PDEVAMAYGK SLAFGRDYII PTPFDPRLIH RIPPAVARAG MDTGAARRPI IDMDAYELGL
421 KSRMDPTASI LRGINARARK AQSRMIFAEG DDPRVLRAAV TYQRSGYGKA LVVGRHDDVK
481 AKLEAAGLGD AVRELEVVNA ANTTHLETYK EFLYSRLQRK GFDNKDVHRL AARDRHVFSA
541 LMLAHGHGDG LVTGATRKSA HVLHQISHVF DADAAHGAAG ITALLHKGKI VLIGDTLVHE
601 WPDEHDLATI AERAADVARH MGLEPRVAFV SFSTFGYPIS ERTEKLTKAP KVLEARGVSF
661 EFEGEMTVDV ALNPRSKEAY PFSRLTGPAN ILIVPARHSA SISTKLMQEM AGATVIGPIL
721 TGVDKPIQIC STVSTANDIL NMAVLASAEI G
SEQDB ID: 3101377MA
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRRAFRPISR RLFRRSKPRS HGSGAGCMAS FGTDGGWSAC RNFRRCPMKP FALIAALALA
61 ASPVLALDLT TDTQLGSTPD EIRTSLKDLG YDVRKIEDED GKIEAYVVKD GKMAEVYVDP
121 KTGKISKIEM E
SEQDB ID: 3101377MB
Reference:
3101377
Name: cytochrome b
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGTPGGREG AREIRVWDPL VRLTHWGVAL GVLVNSALTD PDGALHEQVG YGVLALVVLR
61 LLWCIVGPKP ARFSAFPPSP AAALGHLRAM LRGERKVHLS HNPLGALMVY NLWLTLLALS
121 ATGIMMGTVT FFGVDWVEEL HEAAFGWLMF SVALHVGGVL FDQWRTGVPL ARAMVTGRKR
181 IQAERLDG
SEQDB ID: 3101377MC
Reference:
3101377
Name: transcriptional regulator, Isotype: LuxR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPGDADERR AAILAWMIVL QALCALFFIG DVLADLRAGN DDTGTHLWLE GSVALVLCIG
61 LGVLMYELRQ LLMRMERVTT TLRAARGEMA EVIEGFFADW GLTPAERDVA LMILKGLDND
121 SIATVRGRAA GTVRAQSAAI YAKAGVDGRT QFLSLFMEEL LADPD
SEQDB ID: 3101377MD
Reference:
3101377
Name: MiaB-like tRNA-modifying enzyme
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSAPKFTTLG CRLNAYETEA MKELSAQAGL DNAVIVNTCA VTAEAVRKAR QEIRRLRREN
61 PTARLIVTGC AAQTEPETFT AMAEVDAVIG NTEKMRPETW KSMTADFIGE TEAVQVDDIM
121 SVTETAGHLI DGFGTRSRAY VQVQNGCDHR CTFCIIPYGR GNSRSVPAGV VVDQIKRLVD
181 RGYNEVVLTG VDLTSWGADL PAQPKLGDLV MRILRLVPDL PRLRISSIDS IEVDENLMQG
241 IATEPRLMPH LHLSLQHGDD LILKRMKRRH LRDDAIRFAE EARRLRPEMT FGADIIAGFP
301 TETEAHFENS LKLVDDCHLT WLHVFPYSRR EGTPAAKIPS QVNGKIIKER AARLRAAGDR
361 RVALHLAEQV GRSHRILMES PHMGRTEQFT EVHFDTPQPE GQIVTTTITG TSGNALTA
SEQDB ID: 3101377ME
Reference:
3101377
Name: diaminopimelate epimerase, Class: EC5.1.1.7
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dapF
Sequence:
1 MTFMKMHGLG NDFVVVDARL HPVRITGALA RGIAHRHLGV GFDQLAVIEP GKGDAHLVFY
61 NADGSTSAAC GNATRCIARH LMDETGKTEL HLTTDRGDLY ARDAGDGLTS VNMGAPQLLW
121 HEIPLAEEMD TLELPIEGGP TATGMGNPHC TFFVADAEAI PLAEFGARYE HHPLYPQRTN
181 LQVAQITGPD RIRMRVWERG VGITLASGSS SCATAVAAAR RGLTGRKVQI DLDGGTIWID
241 WREDGVWMTG PTMHVFSATL TPEFLASLG
SEQDB ID: 3101377MF
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLPQMHRWA AIEIMFSGLK EWRPAATRYD RCPKVFLSAS VPAATVLYRP RVLVL
SEQDB ID: 3101377MG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNTLKSFIGG VALSLTLAGS AMAAGVDLNA SSTGLALQGY DPVAYFTVGE ATEGDWKITA
61 VYDDATYRFA NAENKATFEA NPEAYLPAYG GYCAFGAAMG FKFDGDPDNW KIVDDKLYLN
121 LSDEIQAKWE EDVPGFIVKA NANWTDIADK APAELQN
SEQDB ID: 3101377MH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNLQELALAR LRDWPLGTTI GLSGGRRYAV SKSAYASGRS IKLVATELGG TDYISLNLYE
61 LAQAPRLAPC EMPLAKVLAF LSELRPEGKQ A
SEQDB ID: 3101377MJ
Reference:
3101377
Name: ORF TIGR00023
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPAFDTPAMM LILWAVIGYG LGSIPFGLIL TRAMGMGDLR QIGSGNIGTT NVLRTGNKGA
61 AALTLLLDGG KGAVAVLLAR AFAGEDAAQV AALAAFVGHC YPIWLGFKGG KGVATFLGLW
121 LALAWPVGVA CCLSWLAGAA VTRISSMGAL VAAASSTFWL VLLDQGAGFV LGIVLTLMVF
181 WRHRANIARL KARTEPKIGQ KSA
SEQDB ID: 3101377MK
Reference:
3101377
Name: dihydroorotase, Class: EC3.5.2.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSNILFTNAR LIDPEAGTDR IGWLRVTGGR IVATGEDSPQ GLEEPPAETL DCGGKCLAPG
61 IVDIGVKVGE PGERHKESYK SAGQAAAAGG VTTIITRPDT NPAIDTPEAL EFVTRRAQAD
121 TPVNVLPMAA LTKGRQGREM TEIGFLLDAG AVAFTDCDHV VTNTKVFSRA LTYAKSCGAL
181 VIAHPQDPGL SEGAAATSGK FAALYGLPAV SPMAERMGLD RDIALLEMTG AKYHADQITT
241 ARALPALERA KKNGLDITAG TSIHHLTLNE LDVSGYRTFF KVKPPLRSED DRQAVIEAVR
301 TGLIDTISSM HTPQDEESKR LPFEEAASGA VALETLLPAA LRLYHAGQLD LPTLFRAMAL
361 NPARRLGLAS GRLGAGAPAD LVLFDPDVPF VLDRFTLKSK SQNTPFDGQR MQGRVLATYV
421 AGQAVYRRD
SEQDB ID: 3101377ML
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADPVIRFVA DRQAYLRNHT WMAAIAMGGA MAVLWALGNP YIWTGAPAGL AAIALRGWYL
61 ASEELAVVWE ISEDTLSGPG PRVPLSQIEI VRTMGSYVQV ITKGGDKHLI KYQADPAATK
121 AAIERAMT
SEQDB ID: 3101377MM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLDVSATE HGVIRLYSLD MRPEEARFLQ EPGAVAQFLG VETLDMDHVE VFPVADLEEL
61 GLDGYLAEGL GVPEDQFDRA ALRARTGWVL MLRSRAFGGR ALDLPLPAVM TLIGTYREAG
121 TDWSGTLIKT ASALPHSAPR LSPREARRKA RNIGFTMFAI IMSLIIAGLA WLIL
SEQDB ID: 3101377MN
Reference:
3101377
Name: Asp carbamoyltransferase, Class: EC2.1.3.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pyrB
Sequence:
1 MSFAHRHLLG IEQLSPADIT AILDLAETYV ALNRQSAKHS DVLSGLTQIN MFFENSTRTQ
61 ASFELAGKRL GADVMNMSMQ ASSIKKGETL IDTAMTLNAM HPDLLVVRHP HSGAVDLLAQ
121 KVNCAVLNAG DGRHEHPTQA LLDALTIRRA KGRLHRLNIA ICGDIAHSRV ARSNLILLGK
181 MENRIRLIGP PTLVPAQFAE FGAEVYDDMR EGLKDVDVVM MLRLQRERMD GGFIPSEREY
241 YHRYGLDREK LGLAKPDAIV MHPGPMNRGV EIDGTLADDI NRSVIQEQVE MGVAVRMAAM
301 ELLARNLREA T
SEQDB ID: 3101377MP
Reference:
3101377
Name: uracil-DNA glycosylase, Class: EC3.2.2.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: udgA
Sequence:
1 MESALDPHTA LALLQWQVEL GVTETILDAP LDRYALPETA PRPPAQAAAD PRRPAMPAPP
61 PKAPEVDPAQ EAVRAARAVG SLDALRTALA EFEHCELKRG ARNLVFADGV PGARVMIIGE
121 APGRDEDREG RPFVGRAGQL LDRMLAAIGL SRSESVYITN VLPWRPPQNR DPLPVEIGMM
181 KPFLERHVAL AKPEVLVLMG NISCETVLGR RGITRLRGQW TQAMGLPVLP MFHPAYLLRQ
241 PQMKRQAWAD LLELQAKLRE S
SEQDB ID: 3101377MQ
Reference:
3101377
Name: Ser/Thr protein phosphatase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRILAFSDLH MARARAADLV AASLEADLVI GAGDYCNGRQ GLDQAMAMLA GIMVPLVLVP
61 GNAESADELR AAAPDGAHVL HGSGVRIDGL RLFGLGYGVP PTPFGDWSCD LTEGAAAELL
121 DRCTGADILI THSPPKGIGD VTSTGLSVGS TEIRDAIERV QPRLALCGHI HDSWGAEGMI
181 GRSRVVNLGP TVNWFEVPA
SEQDB ID: 3101377MR
Reference:
3101377
Name: transmembrane AA efflux protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIDPVTLLTF VPAALALNLT PGADMMFCLG QGLRAGPRAG WAASAGISAG GMVHVSIAGL
61 GLGAAVQAMP WLFDVIRWVG VAYLLWLAWG ALRQEFGTSE APIRPARRAF RDGMLVNLTN
121 PKVILFVLAF IPQFIDPAAG PILAQFLVFG VVIAIGGFIV NGMVGQFAGG LGRRLTGDPR
181 LGRVLSRLTA GIFAALALRL ALLERT
SEQDB ID: 3101377MT
Reference:
3101377
Name: Mo cofactor biosynthesis protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRIDESLDF IPVRIAVLTV SDTRSIEEDR SGQTLVDRIA RAGHLLADRR IVRDERAQIA
61 DQLRAWVADP EIDVIISTGG TGLTGRDVTV EAHRDVYEKE IEAFATVFTL ISMEKIGTSA
121 VQSRATGGVA GGTYLFALPG SPGACKDAWD GILEKQLDYR HRPCNFVEIM PRLDEHLRRK
SEQDB ID: 3101377MU
Reference:
3101377
Name: efflux transporter, Isotype: RND family, Subunit: MFP
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRFLRQSLLG VFLASVALAL LIWAGQLVIE AVQARMAGDR KPPAARERVF AVNVQRAEYG
61 TVTPVLEAFG QIQSRRTLEL RAAMGGRVID LSDNFVEGGT VAMGEVLVRI DPAKPQTELD
121 RARSDLMDAE AEERDAARAL ILAGDELQAA ADQSALRAQA MKRQQNLVER GVGSAAAAET
181 AELADAQARQ AVLARRIAVA QAEARVDQAA TRLARAQLAL EQAERDLTET EVTARFDGTL
241 SGVTLVEGRL VAVNEKLAEL VDARALEVVF RVSTAQHTRL LDAAGRLIGA PVEIELDVAG
301 ADLTATGTIS RDSAAAGEGQ SGRVIYARLD AAPGFKPGDF VTVRVEEPPL ADVVRLPASA
361 LDAAGTVLVL DSEDRLEQLP VTLIRRQGDA VLIRGEGLAG REVVLGRTPL LGPGIRVRPL
421 RDEAQAGSPD LSMLELSDER RARLVALVEA NERMPSEVKA KVLGQLAETR VPARLVARLE
481 DRAGG
SEQDB ID: 3101377MV
Reference:
3101377
Name: AcrB/AcrD/AcrF family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVRGIPSAAG GLLSYFTRHR TVANLLLMVL LVLGAAAIPN MRAQFFPDVI VQSVSVNVEW
61 EGAGPEDVDS AIVQVLEPAL LAVDGVESTT ASSREGRADI ELEFEPGWDM SQAADDVQAA
121 VDAVTTLPED AEDPSVRRGA WRDRVTDVVI TGPVGPQQLA LFTDELVVRL FEIGVTRTTI
181 RGIAAPRTVV EVSSAKLIAN DISMNEIATA IAAEVTGDPA GDVSGANARI RTGVEKRSPE
241 DIAGIVLRSN PDGSKLRIAD VAQIRVEGVT RDRAYWVGDQ PAMSIRVDRS DRGDAIRVQH
301 QVAEVVERMQ ASLPQGVTVQ LIRTRAEAIS DRLNILVDNG LMGLALVVML LFLFLNARTA
361 FWVAAGIPAS MFAAIALMYV GGLTINMVSL FGLIITLGIV VDDAIVVGEH ADFRARRLGE
421 HPVVAAETAA RRMAMPVFAA TLTTIIAFFG LTAIGGRFGE LIRDIPFTVI AVLAASLVEC
481 FLILPNHMSH AIAHSAKEHW YDWPNRVVNR GFRWLRDHLF RPFVGWVVHA RYVVLAATVA
541 VLASQAALFI TGDVQWRFFN APERGSVTGN FIMAEGATRA DTLEMMRELQ RATEELGRIY
601 EERHGRNPID YVLAEIGGNA GRGLAGAETK DADLLGGISI ELIDADLRPY SSFAFVGELQ
661 DFVTRHPKVE TLSFRGWRSG PGGDALDVQF YGASAQVLKA ASNDLQAALL RYPEVSAVED
721 DLAYDKEEVV LDLTAQGQAL GFTVDALGRA LRARLNGIEA ATYPDGPRSA EIRVELPEGE
781 LTADFLERTL MRAPAGIYVP LADIVSVSQR TGFSTVRREN GIRRISVTGD ISEDEPARAT
841 EISAALETQI LPRIASERQV EWRMAGLSEQ EDTFLSEAAT GLTLCLTGIY LVLAWVFASW
901 TRPLVVMAII PFGLVGTIWG HYIWEVPLSM FTVVGLLGMT GIIINDSIVL VTTIDEYAES
961 RGLLPSIIEG TADRLRPVLL TSLTTVLGLA PLLYESSQQA QFLKPTVITL VYGLGFGVLL
1021 VLLVVPALLA VQNDVARPMS ALRRALRGGA PLARAAVTAS AVLTLAWLGV TVAWVAATGA
1081 LPARLLGLLP PLEGLSPMPA ALALFILGAL LVCLLAMAVS AMIMMRAGGR NAA
SEQDB ID: 3101377MW
Reference:
3101377
Name: hydrolase, Isotype: NUDIX family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAQPRIGAL AVVIHEGQVL LAQRGKDPGR GLWGFPGGHV EWGETVRDAA LRELHEETAI
61 EARAQRYLTH FDLIHRDDAG QAVVHYLLVG VLCRYQAGAP QAGDDAMDAR WFPIDHVREG
121 TVPLIDRVSE LMEIALSAS
SEQDB ID: 3101377MX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGMSTRFPML ALAALLSLPL AAPAPAAGLD DLVQIEILDG GLTPSGTYLG AIRMTLSEGW
61 KTYWRAPGEA GIPPSFDWRG SRNLGELSIT WPAPEVFEQS GLRSIGYTDQ MVLPIEITPK
121 DANRPVRLRG EMEFGVCKDI CVPGNLDFDH TLDASAPRNP AIVAALARRP YSAAEAGVTS
181 ATCRISPSQG GMRIEARIAM PSAGGSELAV FEPGDPALWA GEAQTRRQGN TLIASSEILN
241 DGGTAFALDR SRIRITVLGA KRAVDIRGCL PG
SEQDB ID: 3101377MY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWGKGEPLPM MDLTGKLLIA MPGMGDPRFE RSVIFLCSHG EDGAMGLIVN KPADLNVSTL
61 LEQLEIPSSS AAAARAPVRL GGPVEMARGF VLHSPDYAGK LQSLKVSDGF VMTATLDILE
121 DIARDNGPAR AALMLGYSGW GPGQLEAEIG DNGWLTADAD PDIVFGSRDD GKWEAALKLL
181 GIDALLLSAS AGHA
SEQDB ID: 3101377N
Reference:
3101377
Name: ribokinase, Class: EC2.7.1.15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rbsK
Sequence:
1 MAIWNLGSIN ADMVYAVPHL PGPGETLAAS GLERFLGGKG ANMSVAAARA GSQVRHIGAV
61 GPEGRWAIDR LTEYGVDTRH IATLEAPTGH AIIAVEPGGE NLIVLLPGAN RAISPERVGS
121 VLLDAAPGDL LVMQNETSAQ VEAARLGRER GLTVCYAAAP FDAQAVRDVL PWLDFLILNA
181 VEAEQLQEAT GLTPDQLPVS HVIVTLGSKG ARHFDTDKGI STEYPAYRVK AVDTTGAGDT
241 FTGYVLSGMD RGLPMPQAIT QAMRAAALMV MRHGTADVIP DLKEVLAARF
SEQDB ID: 3101377NA
Reference:
3101377
Name: Sua5/YciO/YrdC family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVQPTLRLA ADPDGIARAA ELLRDGRLVA FPTETVYGLG GDATNGQAVA GIYAAKGRPS
61 FNPLIAHVAS AEAARRHVHW SETAERLATA FWPGPLTLVL PLRANHGISE LVTAGLDTLA
121 VRVPAHPTAR TLLATLDRPV AAPSANPSGR ISPTTADHVL AGLDGRIAAV LDAGPCGVGV
181 ESTIVGLSGT PILLRPGGLP TEEIEALLGQ PLARHQQGDN ISAPGQLLSH YAPQSTVRLN
241 ARAPSDGEVF LGFGPMDCDE NLSPSGNLTE AAANLFAALH RLDTTGKPIA IAPIPERGLG
301 LAINDRLRRA AAPRDP
SEQDB ID: 3101377NB
Reference:
3101377
Name: acyl-CoA dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPYRSPVTDY TFLLSHVVGY DRVSGTEKYA EAGADMVSAI LTEAGRMCDE VMAPLQRGGD
61 LNPARLENGA LRSSPGFAEG WKAIAEGGWI GMSGSPEHGG MGLPMAVTTA VNDMMSGACL
121 SLQLAPLMSQ GQIEALEHHA SDAIKALYLP KLISGEWSGT MNLTEPQAGS DVGALSSKAE
181 PNGDGTYAVT GQKIFISWGD NDFCDNVCHL VLARLPDGVP GTKGISLFLV PRNLPDENGN
241 AGVANSLKVV SLEHKMGLHG SPTCVMQYDG ATGWLVGEEH GGMAAMFTMM NNARLGVGGQ
301 GVGVAEAAWQ HAMAYAMERK QGKSASGTIA DHADVRRMLT SMKADVFAAR AILAACAVAI
361 DMGNATGSAE WKARAAFLTP IAKAFGTDTG IAVSETGVQV HGGMGFIEET GAAQFYRDVR
421 VTAIYEGTNG IQAMDLVARK MMDGGEAAAK LLDEIEDHAE RARGRLPELA GPVWEATETL
481 REATEWMVAQ GELNDRFAGA VPFLRAFARV LGGHFHLIAA LADPGGPREK LARYYINALL
541 PEHAGLLEQA QGGCADLYAI SLEELSA
SEQDB ID: 3101377NC
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMDRTPGLAM RYPWDEPPAH GSAIEVAEGV LWMRLPLPMK LDHVNVYALD DGDGWTVIDT
61 GFSSKKTRAI WQALIDGPLA GKPVRRVVVT HHHPDHMGNA GWFQSELGAE LVTTRTAWLF
121 SRMLTLDVQE SWPEETLDYY RSAGMAPEVL AKRMAERPFN FADMVYPMPL GFARIKQGDV
181 FRMGGRDWDV HMGNGHAPEH ATFWSRDDNL VITGDQILSS ISPNIGVYAT EPMADPLADW
241 LETCERLAPL ARPEHLALGG HKLPFTGLPI RMRQLIDNHH GALKRLRDHL DTPKAASDCF
301 APLFKRTIGE GEYGLALVEA VAHVNHLYHT GEVTRTRRAD GAWLYQRKG
SEQDB ID: 3101377ND
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQNKIETSAE YAEAAALPPR CHEVHADPDS PARMTDVPVP MQQPVQNKSP AQWAYERLIL
61 YIRNFEEQLD ASQEVAMGFV GGDAGVLRIE GIGFFDPDIV TFYGADGTGA RTQLVQHVSQ
121 LNVMLRAMPV ATEDRPAQRI GFRLAADLEA D
SEQDB ID: 3101377NE
Reference:
3101377
Name: glycerophosphoryl diester phosphodiesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSHFTHVRNA WSGSWSRRRV FVPLYAALRL LVLALIAPAL AGLINLAVSL SDQSALTDQD
61 IARFVLSPLG FAATLAVLSV LLVAEVLSFA VMAATLRSGA SNVWHAGSAG LALVLRRLRP
121 LLIFAALFVL RVLALAAPFV ALAGLIAWWV LVDYDINYYL TFRPPSFRLA MAGIAVLVLV
181 LAWLLMLRLS GWALSLHLVI FEGTRPAQAF AESTRRMGTR RGALKIELVL WLLTRLALAA
241 ALGALASAAL ALVPIPQEGA LRRALVLVVL VMGLWSLAGL ALAATALGAL TKLLDRFYDG
301 AAAAAPLSPS RPQGLRGRLI GAALLAALAL GAGMWVSDGL LTQLTAKDEV SVIGHRGAAG
361 ARPENTMAAI VKAIEDGADW VEIDVQETAD GEVVVMHDSD FMKLAGVPTK IWDATMQDLA
421 EIDIGSWFSP DYAAERAPTL RAVLEAARGK SNVLIELKYY GHDVDLENRV IALVEEFGMQ
481 DQIATMSLKY PAVQKMRALR PDWRTGVLAA TAVGDLAGLE GDFVAVSSAS LRPSLLRAAH
541 AAGKDVYVWT VNEPLLMSKM ISMGVDGLIT DEPAMAREVL AVRATLNPAE RLLLWLTQEL
601 GWELNAKAYR DDSP
SEQDB ID: 3101377NF
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQRPIAMTAR NLLILCLCAG SPAMAQDLTQ MLEMPAHRAL MAAQQAAPLT PFTTDGCSGG
61 LSAGWTMVGD TFPDFAAAQG NLPPWEACCV IHDRAYHDAG GALTPEDSYA ARQQADRALQ
121 SCVRDTGESH LADLAVRYDT TPEKVRSAYG TIADAMYLAV RFGGGPCSGL PWRWGYGYAH
181 CTPFDSTAPA RD
SEQDB ID: 3101377NG
Reference:
3101377
Name: cytochrome c oxidase, Subunit: IV domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADFKPGSMD ITTQTNTFDG FIKAMIRVCV VIFFVLLFMA VFTA
SEQDB ID: 3101377NH
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKLIFLAGAL ALSLMACTRQ SAPPADDATV AAVRYRDPGP AKLTLYTMVN NRSGAGAHTS
61 LMINASERVI FDPAGSFWAD IVPEQNDVLY GITPAVETAY RGSHARETHH VVVQELEVTP
121 EQAEAAYRLA RSMGPVPGAY CANYTARLLQ QVPGFGDIKV TFQPTKLADQ FGSRPGAVTN
181 RYYEQDDADL QKGLAANNAK LNQPG
SEQDB ID: 3101377NJ
Reference:
3101377
Name: AzlC-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFTTSKSVY WKGFRDGAPF IMVAAPFGTL FGVFATEAGL NLVQVMTFTA TVFAGAAQFT
61 ALQLLLDDTP TLIVLLSALA VNLRVAMYSA ALTPYLGAAP LWQRAVAAYF TVDQSYALSV
121 VRFETEPDLT VPQRMAYFFG TVTPLAPAWY LATYLGAVLG TRIPDSWALD FALPITFLAM
181 IGPMLRTLPH VIAALVAIVT ALLTAAVPFN LGLLIAGTAG MMAGARAEVI LERRSKRT
SEQDB ID: 3101377NK
Reference:
3101377
Name: formate dehydrogenase accessory protein, Isotype: FdhD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: fdhD
Sequence:
1 MAISDDLSDY IIAPDPGAAR LTRAVEGLDQ TGAPTRLSVV EERPLTIFLN SQEIVTAMTI
61 GDYPEYLALG FLRNQGMLRP DEEITGVDFD EDLETVVVRT AVETSHEEKL KKKTRTSGCA
121 VGTVFGDMME GLEEVRLPQV EVRTSWLYDL AARINRTPSL YLEAGAIHGT VLCHRNRPLV
181 YMEDVGRHNA VDKIAGWMLS TGEGADDKIL YTTGRLTSEM VIKTAMMGIP VLASRSGFTA
241 WGVEIARQVG LTLIGRMRGQ RFVCLSGAER LVWDADPDSV PVEDRKHRRK SAQ
SEQDB ID: 3101377NL
Reference:
3101377
Name: molybdopterin-guanine dinucleotide biosynthesis protein, Isotype: A
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mobA
Sequence:
1 MTKPLGVILA GGLATRMGGG DKGLLPLGGQ PLLGHVIDRL APQVSGLALN ANGDPARFNG
61 FGLPVLPDTV EGFAGPLAGV LAGLDWAAGQ RADSIVTAAA DTPFFPRDLV ARLVAASEGQ
121 AHPLVLATTP RDGAVLKSGG RVNRHPTFGL WPVALRDDLR AALNDGLRKV VLWTDRHGGR
181 EALFQAEPFD PFFNVNTPED LARAETLLER A
SEQDB ID: 3101377NM
Reference:
3101377
Name: molybdopterin-guanine dinucleotide biosynthesis protein, Isotype: B
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mobB
Sequence:
1 MRIYGVTGWK NAGKTGLMER LVAEITGRGL TVSTVKHAHH SFDVDHPGRD SWRHRQAGAS
61 EVILASRYRV AQMTELRGAA EPPLSELLGR LSPVDLVLIE GYKREGHPKV EAFRAEAGTA
121 LIAPGDPTIR AVASDTPLTL DRPVFDLNDT TAIADFILSE VGL
SEQDB ID: 3101377NN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPFDTIAMV DWSGGNDTGP RPRKDAIWAC VAGAEPVYLR NRGLAENWLC DLIETALAAG
61 RRLMLGFDFP FGYPTGFARA VSGSDDPLHI WDWFEARIED TPKANNRFDL AGAVNRGLGG
121 KGPFWANGLK RDIGGLPRTK RDYHNPFADR RLVERRAPGA FTCWQMAGAG AVGGQVMMGL
181 PVLARLRRRF AGQIGVWPFE RLDKPVALVE IWPSLTLGKA PEGRIKDAWQ VERVASDLSG
241 MSLARLGSLL NVTAPEEGWI LGVDQG
SEQDB ID: 3101377NP
Reference:
3101377
Name: molybdopterin biosynthesis protein, Isotype: MoeA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: moeA
Sequence:
1 MTGIEPPPLR NDCFALPAGV EWTPVDTALD MLRDRLGPVT GVEMRLLSQA LGGVLAADAV
61 ALRSSPPQAN SAVDGYGFAG AVPEGAHVMP LEEGRAAAGV PFDGVLPAGR ALRVLTGAAL
121 PEGVETVILE EDVTLGTGEI AFRGPLKRGA NTRKAGEDVA EGAVVLPAGR RLTPADLALL
181 ASVGLGVVPL RRQLRVAVLS TGDELVEPGE TAGPGQIFDA NRPMLLSLIH RLGHAPVDLG
241 RVPDDRTTLR ATFDRAAAEA DVILTSGGAS AGDEDHVSAL LRAAGAMQQW RIALKPGRPL
301 ALGLWQGKPV FGLPGNPVAA LVCSLVFARP AMAVLAGESW SVPQGYDLPA GFEKRKKPGR
361 REYLRARVRD GRVEVFASEG SGRVSGLSWA EGLVEIGDDA CHIRPGDPVR FIPYGSFGL
SEQDB ID: 3101377NQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGPSPDPDP ARNTPLGLYD RPRRASVTGI EIIAIALTLL WLAVSVYLFA FADAGAGGGI
61 GFLVTMLAIF MPVAMIWVAA TAAKASRVMR EESQRLQAAI DAIRQAYISQ QQKQAAGHEP
121 SVAKKLDEIA AAAKKTETTL ATFSTSRRAR ALPMPAAAPE SAEDQGLLAL GTPAEALSPP
181 LSTEDLIRAL HFPETAEDVE GFAALRRALK DRSAAQLIQA AQDVLTLLSH EGIYMDDLRP
241 DMARPEVWRQ FAHGARGRTV ASLGGVRDRS SLALTAGRMK QDPIFRDAAH HFLRLFDRMF
301 TTFEAQASDA EISALGETRT ARAFMLLGRV AGTFD
SEQDB ID: 3101377NR
Reference:
3101377
Name: transcription elongation factor, Isotype: GreA
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: greA
Sequence:
1 MEKIPMTPSG FAALEAELKQ LKSVERPAII KAIAEAREHG DLSENAEYHS AREKQSFIEG
61 RIKELEGVLS LADVIDPTKL SGAIKFGARV TLVDEDTDEE KTWQIVGEHE ANIEKGLLNI
121 KSPIARALIG KDEGDSVEVK TPGGQKSYEI LSIEYS
SEQDB ID: 3101377NT
Reference:
3101377
Name: glyoxalase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKATLEHANL TVADPKATAA WLNTVFGWET RWEGAAIAGG YTVHVGDAGT YLALYAPPKP
61 VPSAETSYDV IGGLNHVGVV VDDIDATEER VRAAGFTPHN HADYEPGRRF YFDDDNGIEF
121 EVVSYP
SEQDB ID: 3101377NU
Reference:
3101377
Name: redox-sensitive transcriptional activator, Isotype: SoxR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: soxR
Sequence:
1 MPASEGLSIG ALARRTGLAV SAIRYYETQG LIAPWRNAGG QRRYQRADLR RLSFVMIAQQ
61 LGLTLPEIRE VLAGLPGNRT PTRGDWTRIS TALRERLNQR IATLERLRDN LDGCIGCGCL
121 SLPNCALYNP ADRVGSKGPG PRLVLDETGD L
SEQDB ID: 3101377NV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPVSLQVAYP TRDDTTFDYD YYLTTHMGLV AEHMGPHIQN TVVTKGLAGG PDTPPPFHAI
61 ATIVFADQNA MNAAMKASGP VVSDIPNFYN SAPQMLIGEV VG
SEQDB ID: 3101377NW
Reference:
3101377
Name: electrotransfer ubiquinone oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAEIEREAME YDVVIVGAGP AGLSAAIRLK QLDADLNVVV LEKGSEVGAH ILSGAVLDPC
61 GLDALIPDWK EKGAPLNVPV KDDNFYMLGE AGQIRIPNFP MPPLMNNHGN YIVSMANVCR
121 WMAEQAEELG VEIFPGMSCS ELVYGDNGEV KGVVAGVFGL EADGSYGPNT EPGMELHGKY
181 VFLSEGVRGS LAKEVIAKYD LQKGKEPQKF GVGMKEIWEI DPAKHREGSV THTMGWPLGG
241 NAGGGSFIYH LDNNQVYVGF VVHLNYKNPH LFPYMEFQRF KHHPMVAELL KGGKRVAYGA
301 RAITEGGYQS MPKMVAPGVA LLGCSVGMVN VPRIKGNHNA MLSGKAAAEA AHAAIKAGRQ
361 SDELSDYETE VRSGPIGKDL KKVRNVKPMW SKWGLAASLA LGGLDMWTNT LGFSLFGTLG
421 HGKTDAAATE DASKHKPIDY PKPDGVLSFD RLTNVSFAAT NHEESQPCHL RLTDPDLPVK
481 VNLPKYDEPA QRYCPAGVYE VVEDEGGPRF VVNFQNCVHC KTCDIKDPSQ NITWVTPQGG
541 DGPNYPNM
SEQDB ID: 3101377NX
Reference:
3101377
Name: TPR domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFSFVQMTGC LLPLTALTPL SHCTRPRNAL ALLQSSWKGG SLAISLVRNA VAAVLAAALS
61 VPVSADVGAG SYLAARQAVF ANDFSSAADY FARALAIDPQ NPALMENMVL SQLALGRLEQ
121 AYPVAQLMQE AGLQSQVANI AIVVHLLSEE RYQEVLDRDP EMRGVGKLVD GLVAGWAEMG
181 LGSVARALAQ FDKVADEAGL RGFANYHKAM ALASVGDFEG AEALFAADDG ALTTISRRAA
241 LARAEILSQL DRNDQALEML ADVFSGGFDP ALSDIADRLV AGETLPFSLV RSVRDGLAEV
301 FFTIGAALNG EASDDFTLVY IRSAVHLRPD HIDALLMTAG LLESLGQYDL AVATYKQIPN
361 DSPDYHAAEL GRAEALRRSA KPDAAIEVLE KLAKDYPSQP QAFVALGDLQ RQQEAYDRAA
421 TAYDKALQLT DPGAPNMWFL HYARGICHER LGNWPGAEAD FRAALELNPD QPQVLNYLGY
481 SLVEKQEKLD EALDLIERAV AARPDSGYIV DSLGWVLFRL GRYDEAVGHM ERAVELMPVD
541 PVVNDHLGDV LWAVGRVREA EFQWRRALSF IKADDTDGEA DPERIRRKLE IGLDRVLAEE
601 GVPPLKVANG D
SEQDB ID: 3101377NY
Reference:
3101377
Name: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, Class: EC2.7.1.148
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ispE
Sequence:
1 MAIEAFAPAK INLTLHVTGQ RDDGYHLLDS LVVFADIGDT IRVSASDRVS LDIDGPEAGG
61 LAAEPDNLVL RAARLLAPER GAAISLTKRL PVASGIGGGS ADAAATLRAL AQLWGLAAPS
121 AEQALTLGAD VPVCLFPVPA RMQGIGDRLG PIPPLPAMDI VLVNPRVAVS TPAVFKSLIV
181 KENAPMNPEL PRWRDLPEFT CWLADQRNDL AEPAIAQQPV IADVLNALRD AGALFAGMSG
241 SGATCFGLFP SDGHSAKSVA KAVLRLAHPG WWCAHGRVL
SEQDB ID: 3101377P
Reference:
3101377
Name: Met-S-sulfoxide reductase, Class: EC1.8.4.-
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: msrA-1
Sequence:
1 MFPIQTLKPI ALIAAMALAT ILQGGKAEAA ETQTLTVAGG CFWCVEADFE KVPGVLGAVS
61 GYTGGTLDNP TYKQVTRGGT GHFEAVQILF DPDQVSRERL LHMFFRSVDP TDAGGQFCDR
121 GDSYRTAIFV SNKVESALAS QAKANAEAEL GQTVVTPILT AGRFYPAEAY HQDYAKGEKL
181 VLTRFGPKRQ QEAYKLYRKS CGRDARVKQL WGDAAPFAGS
SEQDB ID: 3101377PA
Reference:
3101377
Name: decaprenyl diphosphate synthase, Class: EC2.5.1.31
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ddsA
Sequence:
1 MDAKVSTKPH EMLAATLSQE MAAVNALIRT RMASEHAPRI PEVTAHLVEA GGKRLRPMLT
61 LAAARLCGYQ GEDHVKLAAT VEFIHTATLL HDDVVDESGQ RRGRPTANLL WDNKSSVLVG
121 DYLFARSFQL MVETGSLRVL DILANAAATI AEGEVLQMTA ASDLRTDESV YLQVVRGKTA
181 ALFSAATEVG GVIAGVPEAQ VRALFEYGDA LGIAFQIADD LLDYQGDAKA TGKNVGDDFR
241 ERKLTLPVIK AVAQATDEER AFWVRTIEKG KQAEGDLEQA LALMEKYGTL AATRADAHAW
301 AEKARTALEL LPNHEIRTML SDLADYVVAR LS
SEQDB ID: 3101377PB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKELLRSTDP TVMAFASALL EGEDIDCFQM DVNMSILEGG IGIFPRRMMV RDEDYDRALR
61 VVTDNDIPLG R
SEQDB ID: 3101377PC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAFAESELS CDAFLGGHLR LFQPRDGYRA GVDPVFLAAS VAAQTGQSVL ELGCGAGAAI
61 LSLGARVPDL ALTGVELQPG YADLARRNAA ANDIALDVVE GDIAALPQAL RQQSFDHVIA
121 NPPYYLAGSH SPASDAGRAT ALGERTPLAL WIDAAARRLT HRGYLHMIAK ADRLPDMLAA
181 CDDRLGSLEV LPLMPRQGRA AELVILRARK GGRAPFRLQS GLFLHQGSRH PGDRDHYLPE
241 IAKVLRQPAP LPWPGAG
SEQDB ID: 3101377PD
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSVSAHLTEL KKKHANLSLE VEQAQRSPGT DDLQISQLKK QKLKLKEEIE RLSV
SEQDB ID: 3101377PE
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRSRATAIG FVAVLLWALL ALLTVGSAPV PPLLLNALCF TVGGLLGLVW VLATGGLAQL
61 RGVRWPVYAF GTLGLFGYHA LYFSALRLAP AAEAGLIAYL WPLLIVLFSG LLPGERLRSG
121 HLLGAALAFA GAGLIITGGG GPGFQAQYLP GYGLALLCAL TWSGYSVLSR RMGDAPTSSV
181 AVFCLATAVA SWGLHFMVEE TVWPQDMLGW GATLALGLGP VGLAFYVWDI GVKRGDIQLL
241 GTSSYAAPLL STLVLVISGI AAPSWVLALS ALLITGGALL AARASLSA
SEQDB ID: 3101377PF
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDRLPPLTA LRAFDAAARH MSFAKAAAEL NVTPAALSFQ IKSLEEHLGR PLFRRLNRAV
61 ELTEEGRALA PGAQEGFEVL TAAWRAARRL QDNTTLTVTA GPALTAKWLA PRLYDFARAH
121 PEIDLRISTS LRLVDLARDE VDVAIRFGQG SDAGLYSVSA RKEWMIPVMT PELANRFPTP
181 ESLRDAPLIF DESISFLDPP VDWPTWFRAV GIDFTPQRGA HFSNADHAID AAVAGVGVVL
241 GRRPMIIKDV IEGRLVMPFK TAVETDARFR FVCLAGAETQ PKIAAFRDWF LAEIAKTAHI
301 SDGLTIVHVR DIPPK
SEQDB ID: 3101377PG
Reference:
3101377
Name: acetoacetyl-CoA reductase, Class: EC1.1.1.36
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phbB
Sequence:
1 MARTALVTGG SRGIGAAISK ALKAEGYNVA ATYAGNDEAA TAFTAETGIA TYKWNVADYD
61 ESAAGIAKVE AEVGPIDIVV ANAGITRDAP FHKMTPEQWH QVIDTNLTGV FNTVHPVWPG
121 MRERKFGRVI VISSINGQKG QFAQVNYAAT KAGDLGIVKS LAQEGARAGI TANAICPGYI
181 ATEMVMAIPE KVRDSIVAGI PAGRLGEPEE IARCVTFLAS EDSGFINGST ISANGAQFFV
SEQDB ID: 3101377PH
Reference:
3101377
Name: Ac-CoA acetyltransferase, Class: EC2.3.1.9
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phbA
Sequence:
1 MTNVVIASAA RTGVGSFGGS FANTPAHDLG AAVLEAVVER AGIDKAEVSE TILGQVLTAA
61 QGQNPARQAH VNAGLPKESS AWGINQVCGS GLRAVALGAQ HILLGDAEIV AAGGQENMTL
121 SPHAAALRAG HKMGDMKYID TMIRDGLWDA FNGYHMGQTA ENVAEQWQIS REMQDEFAVA
181 SQNKAEAAQN AGKFADEIVP FIIKTRKGDI VMDKDEYIRH GATIEAMQKL RPAFTKDGSV
241 TAANASGLND GAAATLLMTA ENAEKRGIEP LARIASYATA GLDPSIMGVG PIHASRKALA
301 KAGWKVEDLD LVEANEAFAA QACAVNKDMG WDPAIVNVNG GAIAIGHPIG ASGCRVLNTL
361 LFEMKRRNAK KGLATLCIGG GMGVALCVER D
SEQDB ID: 3101377PJ
Reference:
3101377
Name: EAL domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTRIKKLAD LPEGAENPLS AAISSRHRST VAMATEAVRH GDCLLAYQPV LQTAPPHGIA
61 FYEGFIRVLD ETGRVIPARD FMPAVENTEI GRELDCVALE TGLRALVRNP TLRLSVNMSA
121 RSIGYRKWMQ TLERFLKRDE ALGDRLILEI NQTSAMAVPE LVIDFMDRLQ PRGIAFALDD
181 FGDGPIDFNS FRDFFFDAVK IDGRFIRQVS TDAANRATVR ALIALAREFE MLIIAESVET
241 EEDAAFLAEN GVDCLQGYLY GAPTVTPVWE KPETAKASG
SEQDB ID: 3101377PK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIETLSFPDP TQLAVPFFIA AILIEFLWIA MKKRGGRYET RDAVTSLIMG AGSVAEGILL
61 GFIAWAFFML LWRVTPLDMG TSIWAVLICF VLDDLRYYWV HRFGHRVRWV WASHVNHHSS
121 QHYNLTTALR QTWTGTFTFM MVVKAPMVLL GFHPALVLFC GGLNLIYQFW IHTEAIDKLP
181 RWFEAVMNTP SHHRVHHGRN PRYLDCNYAG VFIIWDKMFG TFVPEQEDEK VDYGLVHNLG
241 TFNPLRVAFH EWLGIWRDVT QPGLSLRQRL AYAFAPPGYS HDGSRETSEG IKARYLATHP
301 EQRGTPGFEG
SEQDB ID: 3101377PL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFTLRCREG PMPLEILLIL VIGGISTIAV ILHLSGRSKR ADLTLETARA AWLRHFPQDT
61 VHDILLARDG HAALVETETG PGLLWALGAD TVGRRLQDYA LSETADGLAI RFHDFTAPRV
121 TLTLAPDETP IWQQRLARA
SEQDB ID: 3101377PM
Reference:
3101377
Name: cytochrome c peroxidase, Class: EC1.11.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccpA
Sequence:
1 MSPKSLFSFS LTALSCTAGL AAANPLREQA LELFQPLPST VPAVKDNPIT PEKIDLGKAL
61 FFDPRMSASG VFSCNSCHNL ATGGDDNLET SIGHGWQKGP RNAPTVLNAV FNAAQFWDGR
121 APDLAEQAKG PVQAGVEMAN TPGQVVATLN SMPEYVAWFQ AAFPDQPDPV SFDSFAKAIE
181 AYEATLITPA PFDAWLNGDD AALSGEQKQG LSLFIDAGCA SCHGGVNLGG QDYYPFGLVE
241 TPDAEVLPSG DKGRFAVTAT EDDEYVFRAA PLRNIAVTAP YFHSGKVWEL EAAVSIMASS
301 QLGADLSEEE TAAITAFLHS LTGEVPQVVY PVLPAETSGT PRPDGAVQR
SEQDB ID: 3101377PN
Reference:
3101377
Name: thiol/disulfide interchange protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKKLLLALVY TAAALGANPS LGLAADRAQI EALRDGDMKK LIVLPETRAV SQVPFQLADG
61 AGEATLGDYK GKVVLLNFWA TWCAPCRKEM PQLSALQSEL GGESFEVLTI ATGRNSPAGI
121 EKFFGEIGVD NLPRHQDPRQ ALAREMAVIG LPITVLIGAD GMEVARLIGD ADWNSDSAKA
181 IIQAVIE
SEQDB ID: 3101377PP
Reference:
3101377
Name: argininosuccinate lyase, Class: EC4.3.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argH
Sequence:
1 MTDKTSNQMW GGRFAAGPDA IMEAINASIG FDKRLAAQDI AGSRAHAAML AATGVITDSD
61 AEAIREGLLT VLSEIEAGEF TFSTALEDIH MNVEARLKEI IGEPAGRLHT ARSRNDQVAT
121 DFKLWVRDQF DAAEAGLLAL LRALLGQAEA GADWVMPGFT HLQTAQPVTW GHHMMAYVEM
181 FGRDLSRVRD ARARMNESPL GSAALAGTSF PIDRHMTAAA LGFDRPTANS LDAVSDRDFA
241 LEFLSVASIC AMHLSRFAEE LVIWSSAQFR FVTLSDRFST GSSIMPQKKN PDAAELIRAK
301 VGRIFGANTA LMMVMKGLPL AYSKDMQEDK EQVFDAADNW MLALAAMEGM VRDMTANRDS
361 LAAAAGSGFS TATDLADWLV RVLGLPFRDA HHVTGALVAL AESKGCDLPD LSLDEMQSAH
421 AAITEDVYGV LGVENSVNSR QSYGGTAPAQ VRAQVARWKE MLA
SEQDB ID: 3101377PQ
Reference:
3101377
Name: lipoprotein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPIRLTLAL ALTALISGCG ADGEPVQPTV AANVGVSGSG THVSGGVGLG KGPFNLWLGF
SEQDB ID: 3101377PR
Reference:
3101377
Name: diaminopimelate decarboxylase, Class: EC4.1.1.20
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lysA
Sequence:
1 MDHFLYRDGA LCAEDVPLAE IAATVGSPFY VYSTATLLRH FQLFDEALDG TDHLICYAMK
61 AASNQAILRT LAQAGAGMDV VSVGEYLRAR AAGVPGVRIV FSGVGKTAEE IRVALVGGIR
121 QFNVESEPEM EVINAIALEL GKVAPITIRV NPDVDAKTHA KIATGKSENK FGIPIARASA
181 VYAQAAALPG LEVVGIDVHI GSQLTDLAPF ETAYRKVAEL TERLRAEGHD IRRLDLGGGL
241 GIPYTRSNEA PPLPMEYGAL IKRTLGHLGC EIEIEPGRLI AGNAGLMVSK VIYVKSGEGR
301 DFLILDAAMN DLIRPAMYDA HHDIVPVVEP EPGVEPQPYD IVGPVCESGD TFAKARMMPP
361 LAAGDLVAFR SAGAYGAVMS SEYNSRPLIP EVLVHGDQFA VIRPRPSFDE MINRDTIPPW
421 L
SEQDB ID: 3101377PT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRNRPPNLP LPRFALGLTH AGLWAERLWR GFWPFLSVLM LALAPILLGL HELVPVEWVW
61 AFAAGFALVL VVTLVLGLRR FRRPVRAEAL ARLDAALPGR PIQTLMDEQA IGAQDPASAA
121 LWRAHQARMA ARVANAEPVA PDLVLTRRDP YGLRFMAALC FVAALLFGSV WRVGSVVDLA
181 PGAAQAATGP SWEGWIEPPR YTGLPTLYLN DQTGEVLQLP QGSRITLRLY GEVGQLRLTE
241 EVSGKPLERP DHPEQTVEVT RSGPFEIEGR GGRGWQVVML SDTAPQVEIA GAAETRAGGQ
301 MVLPFAAMDD YGITGGRAVI ALDLEAVDRR YGLRTDPDPR DPVVADLPLP ITGDRREFTE
361 NLIEDFSQHP WAHLPVTITL IAQDAAGQEA ETLPFGTALP ARRFFDPLAA AVIEQRRDLL
421 WSRDNATRVA QILRAVSHRP DDVFRSQTAY LRLRVILRRM EALQRFGLKP AQQEEIAQAL
481 WDLAIMLEDG TLSDALERMR RAQERLSEAM KNGASDQEIA ELMQELREAT QDYLRQLAQN
541 QQNEQDGERQ AQEGESLQMT QDDLQKMMDR IQELMEQGRM AEAQQALEEF QQMMENMRVT
601 QGQGDNGQSE GQRAMEGLAE TLRNQQGLSD QAFRDLQEQF NPGAQAGESQ QNEGRNGGEG
661 RGQSHEGQGQ GSRQSGTGQD GAQQGEPGET GEGSLAERQQ ALRNELGRQE QNLPGQGTPE
721 GDAAREALDR AGRAMEGAEE ALRENDLAEA IDRQAEAMEA MREGMRSLGE ALAQQSQPGQ
781 GSQEGDQRAR NQDPLGRTPG SQGGVDTDES LVPGDDVYRR ARDLLDEIRR RSGESDRPKV
841 ERDYLKRLLD RF
SEQDB ID: 3101377PU
Reference:
3101377
Name: finger-like domain protein, Isotype: MJ0042 family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRLTCPNCDA QYEVPDEVIP PEGRDVQCSN CGHTWFQPPA GEALDADEGD AEDGFAPDAA
61 PAPEEDTSES PDQSDEQDDW DEDGELPDDK DEDSFDNDPA PTDPVQGRGV GPDVSDILRE
121 EAAREAELRA REAEALESQP DLGLDAYPGD EPGRRAREAQ DRMARMRGQE PVAQETDSTS
181 RRGLLPDIEE INSTLRNSDA AAAAPAIHAG PARRRRSGGF MRGFVVMLIF GAVLFLLYTN
241 APLVARTLPQ ADPMLSAYVA LVDQARLWLD AQIGALIPR
SEQDB ID: 3101377PV
Reference:
3101377
Name: cell division ATP-binding protein, Isotype: FtsE
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ftsE
Sequence:
1 MKPRAPSGKK SRKRQGADVI ELENVGYSYG GGELLGEISV ELSPGSFHFL TGPSGSGKTT
61 LLKLCYGALL ATSGQVRAFG EDMRRLDRDQ MALFRRRIGV VHQDCRFLDH LPLTENIALP
121 LTVSGHDLAG EHENLRELMA WVGLSKRAEA LPPELSGGER QRAALARAVI MSPDVVVADE
181 PTGNVDWEMS QRLLQLLVEL NRMGKTVLIA THDLSLIRAA KSQVQARVLR ISNKRLQLAG
241 ADL
SEQDB ID: 3101377PW
Reference:
3101377
Name: cell division permease, Isotype: FtsX
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKGTIRALL MADKQADRVV PPSGFTAQLT LFVSGAMAFL AVFALALSLA SGRLADRWAS
61 ELAQAATLRI NAPADQVAAQ TQAALAILIQ TPGVAEARAL SREEQAALLT PWFGPDLPLD
121 TLPVPQLIEI VGGTPAYDAQ GLRLRLAAEV PGAVLDDHRR WREPLVDAAN SLRRLALVSI
181 LLIGGATAAM ITLAANAALA ANSQVIEVLR LVGARDRYIA GAFVRRFTLR ALIGAAVGVL
241 LGMGGVMLLP EASDEGGFLT GLGFRGIGWL LPLLIPVLGA VVAFAATWHA ARRRLKELA
SEQDB ID: 3101377PX
Reference:
3101377
Name: acyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMMQWVRSIV FTIVIYIWMA ILGLLFTPYA LVSKKGALRA CKLYARSTIW MARWMVGIHG
61 EIRGPVPTGE VLIAAKHQSF FDILLIFHAV PHGKFIMKRE LLWTPVIGVY AKRLGCIPVN
121 RGKRGAAVAR MVKDVAKEFA EPGQLVIYPQ GTRVAPGVSK PYKVGSAVLY EGLQYSCIPV
181 ATNVGLFWPR DGLLRKPGRA VVEFLEPIPP GVPRDAFMRR LETEIEGASD RLMREAGYET
241 AQG
SEQDB ID: 3101377PY
Reference:
3101377
Name: 2-oxoglutarate dehydrogenase, Subunit: E3 component, Class: EC1.8.1.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lpdA
Comment: dihydrolipoamide dehydrogenase
Sequence:
1 MATYDVIIIG AGPGGYVCAI RCAQLGLKTA VVEGRETLGG TCLNVGCIPS KALLHASHSL
61 HEAQHNFAKM GLKGKSPSVD WKQMLAYKDE VIEGNTKGIE FLFKKNKIDW IKGWASIPAA
121 GKVQVGDDTH EAKNIIIASG SEPASLPGVE VDEKTVVTST GALELGKIPK SLVVIGAGVI
181 GLELGSVYAR LGAEVTVVEF LDVITPGMDG EVQKTFQRIL KKQGLTFVMG AAVQKTEIAR
241 GKAKVTYKLL KKDTEHEIEA DTVLVATGRK PYTAGLGLDK LGIEMTQRGQ IKVGKDWQTN
301 VPGIYAIGDV IEGPMLAHKA EDEGMAAAEQ VAGKHGHVNY GVIPGVIYTT PEVANVGATE
361 ESLKAEGRAY KVGKFMFMGN GRAKANFASD GFVKILADKE TDRILGAHII GPAAGELIHE
421 VCVAMEFGAS AEDLALTCHA HPTYSEAVRE AALACGDGPI HS
SEQDB ID: 3101377Q
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEPAGQGVSV RPKPAIGEQN MKIAMWSGPR NLSTAMMYAF GARTDCAVID EPFYAAYLAM
61 TGLHHPMREE VLAAQSQDPG QVAAMLSGPN PGARPFWYQK HMTQHMIPGI PRDWMRSVCN
121 VFLIRHPARV IASYAEKREN PTLEDIGFRQ QAELFDEVSG WGGDPLVIDS HDIREDPARM
181 LERLCDRIGV PWSPHMLSWP KGGHKDDGVW ARHWYGAVWN STGFAGPEGD LPEVPEALQP
241 VLQAAMPFYE RMRAVKI
SEQDB ID: 3101377QA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCAGRAVAAR CLNYRVAAGS DRCQQLHRDM GDAAAFVMHG QFLAVEKGLG RGEVGDLEKR
61 HRMIGAIRVA PDMQVADARR LAHRAILAEH LEPGVEIGHI GLPEGMGCHG SVSF
SEQDB ID: 3101377QB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATHALWQAD VADFDAWLKV FREDRAMRKA AGIRDLHIWR DPDRADHAVA LFEITNLASA
61 QAFFDSEELA MHHERGGIAH ITVKLLTPV
SEQDB ID: 3101377QC
Reference:
3101377
Name: 2-oxoglutarate dehydrogenase, Subunit: E2 component, Class: EC2.3.1.61
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sucB
Comment: dihydrolipoamide succinyltransferase
Sequence:
1 MVPTLGESVT EATVSTWFKK VGDSVAQDEM LCELETDKVS VEVPAPASGV LTEIVAAEGA
61 TVNASAKLAV ISGSASGASP APAAPAAAVT PAVATGKDIA NAPSAEKAMA EAGITPAQVT
121 GTGRDGRIMK EDVTAAVAAA AAAPAPAAAA PAPAAAPRAP ALAEDAAREE RVRMTRLRQT
181 IARRLKDAQN TAAILTTYNE VDMTEVMALR NTYKDAFEKK HGVRMGFMSF FTKACCHALK
241 EVPEVNAEID GQDIVYKNYV HMGVAAGTPQ GLVVPVIRDA DQMSFAEIEK AIAEKGKRAR
301 DGKLSMAEMQ GGTFTISNGG VYGSLMSSPI LNPPQSGILG MHKIQDRPMV INGEIKIRPM
361 MYLALSYDHR IVDGKGAVTF LVRVKEALED PRRLLMDL
SEQDB ID: 3101377QD
Reference:
3101377
Name: 2-oxoglutarate dehydrogenase, Subunit: E1 component, Class: EC1.2.4.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sucA
Sequence:
1 MTEQSPNSQF HASSFMQGHN AEYLEQLYAR YANDPGAVDA AWAEFFRAMG DAETDVKKEA
61 NGPSWARADW PPMPADDLTG ALTGQWAEID AKAAGGKIKE QAAKAGVPVS DDQIKRAVLD
121 SIRALMIIRA YRIRGHLVAD LDPLGMRANT LHPELDPKTY GFADSDMDRP IFIDNVLGLT
181 HASMRQILDI VKRTYCGTFA LQYMHISNPE EAAWLKERIE GYGKEISFTR EGRKAILNKM
241 VEAEGFEKFL HVKYMGTKRF GLDGGEALIP AMEQIIKRGG ALGVREIVIG MPHRGRLNIL
301 ANVMGKPYRA IFNEFQGGSF KPEDVDGSGD VKYHLGASSD REFDGNTVHL SLTANPSHLE
361 AVNPVVLGKA RAKQDQFGDK DRTSVMPVLL HGDAAFAGQG VVAECFQLSG IRGHRTGGTM
421 HIVVNNQIGF TTAPHFSRSS PYPTDIALMV EAPIFHVNGD DPEAVVHAAK VATEFRQKFR
481 KDVVLDIFCY RRFGHNEGDE PMFTNPIMYK KIKSHKTTLA LYTERLVRDG LIPEGEIEDM
541 KAAFQAHLNE EFEAGKDYKP NKADWLDGRW SHLDKNKEEY VRGETAITPE TLAAVGNALT
601 RAPEGFSLHR TVERLLETKK AMFDSGTGID WATGEALAYG SLLTEGYPVR LAGQDATRGT
661 FSQRHSGLIS QDSEERYYPL NNIRKGQAQY EVIDSMLSEY AVLGFEYGYS LAEPNALTLW
721 EAQFGDFANG AQIMFDQFIS SGESKWLRMS GLVCLLPHGF EGQGPEHSSA RLERFLQMCG
781 QDNWIVANCT TPANYFHILR RQLHRTFRKP LILVTPKSLL RHKLAVSRTE EFTTGSSFHR
841 VLWDDAQYGN SDTKLVADDK IKRVVLCSGK VYFDLLEERD ARGIDDVYLL RIEQYYPFPA
901 HSLINELERF KGAEMVWCQE EPKNQGAWSF IEPNIEWVLT RIGAKHTRPT YVGRATSASP
961 ATGLASQHKA QQEALVNEAL SIEGK
SEQDB ID: 3101377QE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFGQSIGTC FAKYITFSGR ASRPEYWYFF LFLLLGSIAA TMLDALLFDA VTTTVETSDT
61 STSARIENTG PIAPIFSLAV FLPHLAVAFR RMHDTGRSGI YAILPFLLML CAVLVLVFGV
121 GIASSFAAGG SLDLLFTRAT LLLLIPTLAV LFISPLLVLW WLTRPSQPGT NQYGPNPVRA
181 VAS
SEQDB ID: 3101377QF
Reference:
3101377
Name: succinyl-CoA synthase, Subunit: alpha, Class: EC6.2.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sucD
Sequence:
1 MAVLIDENTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGMEHLG LPVFNSVHEA
61 KHVTEANATV IYVPPPFAAD SILEAIDAQM EVIVCITEGI PVLDMMKVKR ALEGSSSRLI
121 GPNCPGVITP DACKIGIMPG HIHKRGSVGV VSRSGTLTYE AVKQTSDIGL GQSTAVGIGG
181 DPIKGTEHID VLEWFLADDE TESIIMIGEI GGSAEEEAAQ FLKDEAKKGR KKPVAGFIAG
241 RTAPPGRRMG HAGAIVAGGK GGAEDKIEAM RSAGIVVADS PATLGEAVLE AIGK
SEQDB ID: 3101377QG
Reference:
3101377
Name: succinyl-CoA synthase, Subunit: beta, Class: EC6.2.1.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNIHEYQAKA LLRSYGAPVS DGRVVLRAED AKTAAGELDG PLWVVKAQIH AGGRGKGKFK
61 EADAGEKGGV RLTKSVEEAA EEAKKMLGRT LVTHQTGPVG KQVNRIYIEA GSGIERELYL
121 ALLVDRQTSR ISFVCSTEGG MDIEEVAAST PEKILSFSVD PVTGYQPYHG RRIAFSLGLE
181 GPQVKQCVAL MGLLYKAFVE KDMEMLEINP LIVAEGGSLK VLDAKVGFDG NAIYRHSDIA
241 ELRDTTEEDP KELEASKYDL NYIALDGEIG CMVNGAGLAM ATMDIIKLYG AEPANFLDVG
301 GGATKEKVTE AFKIITSDPN VKGILVNIFG GIMRCDVIAE GVVAAVKEVG LQVPLVVRLE
361 GTNVEKGKEI INTSGLNVIA ADNLSDGAEK IVKAVKG
SEQDB ID: 3101377QH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVPAPSERVA RAVMYFREGG SGQASWAVVT TCREPTVLVL AFVAHHLALG ADYVELYLDA
61 PDPELQEALA DLPGCRVTLC DDAYWQQELG GPRPATNEKR QIRNASRAYL QAEADWLLHL
121 DADEFLETDL VMARILGGLP EAVDFLHLPN LERVFDAAEP QEQLFDGYMR APLLRGWPDQ
181 ADLLDPAIQP FLHRGVVAHS QGKSAVRVGR KLWPGIHSPR APSGHDRPLL WPAVNARVLH
241 YDGLTGFHWI MKLLRGWTDR GGGAAAHAGL APARQAQIAY VDENRGDMFA LLQLHQRLKA
301 LPLVDLERLE AIGLLWRPRI DPGAALRALG LTADLSRVGF DEGLELDIPD FDRHRIRWRR
361 LYRLHFAEAG RKQG
SEQDB ID: 3101377QJ
Reference:
3101377
Name: malate dehydrogenase, Class: EC1.1.1.37
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mdh
Sequence:
1 MARPKIALIG AGQIGGTLAH LVALKELGDV VLFDIAEGTP EGKALDIAES GPSEGFDAKL
61 KGTQSYADIA GADVCIVTAG VPRKPGMSRD DLLGINLKVM KSVGEGIRDN APDAFVICIT
121 NPLDAMVWAL QQFSGLPANK VCGMAGVLDS ARFRHFLAEE FNVSMKDVTA FVLGGHGDTM
181 VPSVRYSTVA GIPLPDLIKM GWTSQEKLDA IVQRTRDGGA EIVGLLKTGS AYYAPATSAI
241 EMAEAYLKDQ KRVLPCAAYC NGELGVKGMY VGVPTVIGAG GIERIIDVSL TKEEQDMFDN
301 SVNAVKGLVE ACKGIDGSLA
SEQDB ID: 3101377QK
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLEPDIGFFA VTIPAVIFAG ISKGGFGSGV AFASASILAI YLDPGQALAL MLPLLMLIDL
61 ATLKPYWRRW SWPDARLLIL GGLPGVALGA LLYRATDADL LRLLIGGISL AFVAWQMLRG
121 RGWMREFASR LPPAAGLLAG AVAGFTSFVS HAGGPPAAVY LLSQRLGKTE FQATTVLTFW
181 ALNIAKFVPY AWLGMFTLDT ARAGLLLAPF ALLGAWLGVR AHHMVPERAF FALAHAMLTL
241 TGLKLIWDAL V
SEQDB ID: 3101377QL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKTMMIKMTM GLGLMALAAG QLQAQGNNCA PRQMVLDQLA QKYGEARRGI GLVQQGSVME
61 VFASDETGTW TITVTLPNGM TCMVASGQSY EALAEALPTS GNDA
SEQDB ID: 3101377QM
Reference:
3101377
Name: citrate lyase, Subunit: beta, Class: EC4.1.3.34;EC4.1.3.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: citE
Sequence:
1 MDPRQRPYRS VLYIPGSKER ALDKARSLPV DAIIFDLEDA VAADEKDNAR ETLKAALAQG
61 GYGARVKIVR INGLDTPWGH ADAEAVRDMD ADVVLLPKVG GAADVDALAA ITGDLPIWAM
121 METPRGMLNA AQIAAHPLLT GFVMGTNDLA KELQTRFRAD RLPMMSSLGL CLLAAKAEGL
181 IAIDGVYNAF KDGEGLAAEC AQGRDMGFDG KTLIHPAQVE IANTAFAPSE AEIDLARRQI
241 AAFAEVEASG QGVAVVDGKI VENLHVATAR EVLAKAEAIL ALQAG
SEQDB ID: 3101377QN
Reference:
3101377
Name: NnrU-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGFVLLILGI AVWWAAHLFK RAMPARRAAM GDRGKGMVAL ALLGSVVLMV IGYRMTDYIH
61 VWAPPSYLTH ANNLLVLVAI WMMSPAGTKG KLLHKMRHPM LAGFRAWAAA HLLVNGDLAS
121 IILFGGLFLW GIVEVAAINA AEPEWTPGEP GTLGKDAMFL VASVVLMAVI GYIHGLVGPW
181 PFPA
SEQDB ID: 3101377QP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKLYRLLTE EDTAAFCHKV SDALAKGWEL YGSPAYAYDA ANGIMRCAQA VTKEVEADYS
61 PDMKLGQH
SEQDB ID: 3101377QQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKTNPGRFF EDYTVGQTLH HAVPRTVTNG ERALYHALYP ARHALYSSDA FAQSCGLPGS
61 PIDDLAAFHV VFGKTVPDVS LNAVANLGYA EGRWLKPVYA GDTLRSVSEV IGLKQNSNGK
121 TGVVYVRTRG LNQRDETVME YVRWVMVRKR DLDAPAPEIV VPELKKALAP NDLVVPEGLD
181 FTAYDFALAG EPHRWGDYAV GETIDHVDGV TVEEAEHMLA TRLWQNTAKV HFDLTFRPDG
241 RLIYGGHVIS MARALSFNGL ANAQIIVGLN GGAHANPCFA GDTIKAWTEV LDKAETAAPG
301 VGALRLRLVA TKGGAPFALH GEDGKYLPEV LLDLDYWVLM PK
SEQDB ID: 3101377QR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGADAEIISA FHLGDFGMRF VLSALLCLAT PVAADDADFV RSNLTAILYH EFGHALIDIL
61 GLPVFGQEED AADVASILLI DALYEEAGAT DIAIDAAFGF LAEAEAVGDE IAWWDVHGPD
121 LQRYYNLVCL FAGADLESRS DIALELDLPQ ERLDSCGEEF DIAYDSWGPV LDEISGAGQS
181 MTYVGPKAGL SAEVVSEEVA VFNDLFHLPE PLEFRVEPCG EANAYYDPEA VSITLCTEFE
241 DWLFEQAPLT RM
SEQDB ID: 3101377QT
Reference:
3101377
Name: von Willebrand factor type A domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSFWRVFLFG LFLTPPAAAC DLALALAVDV SGSVDEGEYR TQMDGLAHAL RDPVVSEALV
61 RAEAQLMLVQ WTGSDRQRVT IPWTQASSFD ALDRFADRVA ADPRIWRNYS TAIGEALEVT
121 MAAFAQVPDC ARHLIDVSGD GPSNEGIEPL AVHRDLRALG ITVNAIAIEQ SEPDLTAYFY
181 ENVIVGEGAF VETANGFADY PARIRKKLLR EVTQQTAALD
SEQDB ID: 3101377QU
Reference:
3101377
Name: succinate dehydrogenase, Subunit: cytochrome b556, Class: EC1.3.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sdhC
Sequence:
1 MADVNRGNRP LSPHLSIYRP QLTSITSILT RITGNALLFA ALLIVWWFLA AATSPEYFAV
61 ADGVITSLIG DLVMALSLWG LWYHTLAGIR HLIWDNALGL DLPTAEKLGW AVVIGSVLLT
121 ILTLVVIA
SEQDB ID: 3101377QV
Reference:
3101377
Name: succinate dehydrogenase, Subunit: hydrophobic membrane anchor protein, Class: EC1.3.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sdhD
Sequence:
1 MRYLTDRKRA VGMGSAKTGT AHFWAMKVSS VALLILIPLF VFTFGPMLGE PHQAVLDYFS
61 RPFPAIVAAL TLVVGFKHFA DGAQVLIEDY VHGLMQKILI ILVICLSYAA AATGLFAIAR
121 IAL
SEQDB ID: 3101377QW
Reference:
3101377
Name: succinate dehydrogenase, Subunit: flavoprotein, Class: EC1.3.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sdhA
Sequence:
1 MAAYEYETHE YDVVVVGAGG AGLRATLGMA EQGLRTACVT KVFPTRSHTV AAQGGIAASL
61 SNMGPDHWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR
121 PFGGHTTEFG EGPAVQRTCA AADRTGHAIL HTLYGQSLKN NAEFYIEYFA IDLIMSEDGQ
181 CQGVVCWKLD DGTFHVFNAK MVVLATGGYG RAYFSATSAH TCTGDGGGMV ARAGLALQDM
241 EFVQFHPTGI YGSGCLITEG ARGEGGYLTN SEGERFMERY APQYKDLAPR DYVSRSMTME
301 IREGRGVGKD GDHIHLNLSH LPAEALAERL PGISESAKIF AGVDVTKEPI PVLPTVHYNM
361 GGIPTNYWGE VLNPTADNPT AIVPGLMAVG EAGCASVHGA NRLGSNSLID LVVFGRASAI
421 RAGKVVDPEA ANPVLNLASV EKAFDRFDGL RNAKGSVATA DLRLEMQKTM QADAAVFRTA
481 KTMAEGVEKM TAIAAKMDDL SVTDRSLVWN SDLMETLELT NLMPSALATI VGAEARKESR
541 GAHAHEDFPT RDDENWRVHT ISRVEGNKVE LSYRPVITEP LTTEEQGGIA LKKIAPKERT
601 F
SEQDB ID: 3101377QX
Reference:
3101377
Name: succinate dehydrogenase, Subunit: Fe-S protein, Class: EC1.3.99.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: sdhB
Sequence:
1 MVQLTLPKNS RLTTGKTWPK PEGATNLRKF QIYRWNPDDG QNPRVDTYFV DMDDCGPMVL
61 DALIYIKNKV DATLTFRRSC REGICGSCAM NIDGINTLAC IYGMDEIKGD VKIYPLPHMP
121 VVKDLIPDLT HFYAQHASIM PWLETKTNRP AKEWKQSIED RRKLDGLYEC VMCASCSTSC
181 PSYWWNGDRY LGPAALLHAY RWIIDSRDEA TGERLDNLED PFKLYRCHTI MNCAKTCPKG
241 LNPAKAIAEI KKMMVERTV
SEQDB ID: 3101377QY
Reference:
3101377
Name: type I secretion target repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTLTELNSE YSVVSSGLAQ SGPQNAALSD GRQVVTWQTR TGLLYFKIVD SEGKSTGSST
61 LVSTIVGPNS PSDVKTLSDG SFIVVYTEQI SSNNSEIRAT RYSDTGQKIG TEMNLMTDAR
121 EILFAPTVTS LSDGGFAVLS GGYSSSDSDH STFVRAFDID GTPRGPMAQL DLTTAGKQVF
181 PEAVGVENGG LVAVWTSGTG DGSGTSVKMR LVDGNGVPQG REIQVNQYTP SDQQEPAIAR
241 LDDGSVIVVW HSKGQDGSEG SIIARHFSAQ GVPQGNEFIV NVTRAGEQTL PTVVALNEGG
301 FVVAWTNLTS RPDTMARQYD YNLRPVTGEI KLSQGSLSRD IGPELSALSN GGVGFVWMDI
361 SVVASLPTLG VEVRTTHPSD FNPTEGNDLL SGDAGNNRIF ARDGDDWVSP GIGSDTVDGG
421 AGNDMVSFID HRQAVRVDLS EGRVTSGRDI NHLSNVENVT GSSFADYIVG DDGDNRLRGA
481 GSYDWFIGSD GADFYDGGSG RDMVSYVSSS GAVQVDLTRG RGQGGMAEGD RYQSIERVTG
541 SSFEDHLTGD AGDNDLRGLG SYDWFVGTAG RDRYDGGSGL DMISYASSSA AVSVDLSQGR
601 GTRGDAAKDS YVSVERVTGS SHDDVLIGDD GRNVLRGLYG EDTLLGNAGV DRLHGGASDD
661 FLDGGAGWDF AIFDGNRDDY NVTRQGERTL VERVSPGNEG IDTLVNIEVI QFQDDFLYL
SEQDB ID: 3101377R
Reference:
3101377
Name: sterol carrier family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLQDIADKMQ TELAGKSFDG SLKFDCGDDG VIVLADNTAS TQDRDTDCTI RLSQDNLVKL
61 LTGKLNPMTG VMMGKLKISG NMGVAMKLGQ LLG
SEQDB ID: 3101377RA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCPEFKLRRR EGPNLTQRMT PMKAANKPAS PQIPAHQALA LLEQAWAYYT PEPVPAAQEE
61 QPDLFQYANA A
SEQDB ID: 3101377RB
Reference:
3101377
Name: pyridoxal-dependent decarboxylase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEMTLNAVVT GPLACESATL SRAETFILAN RFDRPTLVID TQAVARQFAA LAQGLGRAGI
61 HYAVKANPLP EILSTLARLG SNFDAASRVE IELCLAAGAS ADRISFGNTV KKPADIAWAH
121 AAGIALFAAD AEDELDKIAA HAPGAKVYIR MIVEACQADW PLSRKFGCAP DKAIAVLDYA
181 RSVGLDPVGL SFHVGSQTRR AEMWVPVLDQ VAAVWHAARA AGHDLSLLNI GGGFPAFYGQ
241 EVDAPELYAA EVIRLVGERF GDVGQIMAEP GRGMVAEAGA IAAEVLLVSR KSGHDLHRWV
301 YLDIGKFSGL AETMDEAIRY QFLTEREHEP TGPCILAGPS CDSADVLYEK KPVQLPLGLR
361 DGDRIVIRNC GAYTSTYASV GFNGFPPLDV VAI
SEQDB ID: 3101377RC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDAPADAPL DADARRAVKP VICYPNDSLP RPDLALYRAA RASARKTGEV LVPPREGRCF
61 EVKAGQFFRI SSVEGPQVGD LNLHNLHDLT ERFFSGKTRA LHGTHVTTGE RLWSNLPYLR
121 PMATIIEDTL GWYGIDQYGG SVHDVIGTRC DPYTGNLLAG GHYHHCCHSN LTRALADHTG
181 LPLHEAEMLV HDVLNVFMCT GFTRDTGQYF MKASPVRPGD YLEFFAEIDL LGNLSACPGG
241 DCSSEHSSDT ASCHPLLVEI FAPAEGMLGD WPSPSVNGYD RSHGR
SEQDB ID: 3101377RD
Reference:
3101377
Name: purine nucleoside phosphorylase, Class: EC2.4.2.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: deoD
Sequence:
1 MTIHIGANPG EIAETVLLPG DPYRAKWAAE TFLDNPVLVN EVRGMLGFTG MWRGNRVTIH
61 GSGMGMPSLS IYANELIRDY GAKTLIRIGS CGGMQDSVEV RDVILAMTAS TLGTPSRGIF
121 RELSFAPCAD WSLLHAAARA AEDKGVRTHV GGIYSSDVFY DERPDLNEQM VRHGVLGVEM
181 EAAELYILAA RHKCRALAVL TVSDHLLTGA ALPSAERETS FGDMVEIALH AAFPGA
SEQDB ID: 3101377RE
Reference:
3101377
Name: DNA-binding protein, Isotype: H-NS family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGIDLSGMSR KELISLRDQV DGAIKAAEQR ERQEALKAAE KAAAEFGFSL SELSGEARRS
61 TKGTKAQAKY RNPANPEQTW SGRGRKPQWV HDAIQGGADI SELEI
SEQDB ID: 3101377RF
Reference:
3101377
Name: methylmalonyl-CoA mutase, Class: EC5.4.99.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQMQKDRQT ANPDRKADRP WLIRTYAGHS TAKASNTLYR NNLSKGQTGL SVAFDLPTQT
61 GYDSDHVLAR GEVGKVGVPI CHLGDMRVLF DQIPLEQMNT SMTINATAPW LLALYIAVAE
121 EQGADVSKLQ GTVQNDLIKE YLSRGTYVCP PKPSLKMIAD VAEYCYTNVP KWNPMNVCSY
181 HLQEAGATPE QELAYALATA IAVLDELKPR VPAEDFPALC GRISFFVNAG IRFVTEMCKM
241 RAFVDLWDEI LESRYGVSDP KFRRFRYGVQ VNSLGLTEQQ PENNVYRILI EMLAVTLSKK
301 ARARAVQLPA WNEALGLPRP WDQQWSMRMQ QILAYETDLL EFGDLFDGNP VVDAKVEELK
361 AGARAELANL DSMGGAVASI EYMKSRLVDS NAERLNRIER NETVVVGVNR WTEGEPSPLQ
421 TEDGGIMVVD PAVEQEQIAR LESWRADRDD AAVAAALEAL RAAARTGANV MEPSIAAARA
481 GVTTGEWAEE MRKAYGTYRG PTGVSGSVSN KTEGLEDLRA AVDAASDKLG RRLKFLVGKP
541 GLDGHSNGAE QIAFRARDCG MDISYDGIRL TPEELVASAL DQQAHVVGLS ILSGSHLPLV
601 EEVMERMKKA GLAHIPVIVG GIIPDEDSQK LRAMGVAKVY TPKDFELNGI MGDIVTLVSD
661 TEIAAE
SEQDB ID: 3101377RG
Reference:
3101377
Name: acyltransferase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQSDGLFASA TWTALRFWFG NKVSLEGSKS QFSGHVNSLH RGNHRAHQTI VRPRIWWQGA
61 GMTQTVELPL WLFVLIVLFA AVTFASHFLF PSVRWFFRRR LERAVARLNT RLARPIQPFK
121 LARRHDMIQR LIYDPEVARA VRDQAQAEGI PEAVAFEQAQ RYAREIVPGF SAFAYFSFAI
181 RLARFLSNAL YRVRLRHVDA EALRAIDPEA TVVFVMNHRS NMDYVLVTYL AAEQSALSYA
241 VGEWARVWPL SRLIRAMGAY FIRRKSRSDL YRKVLAAYVR HATDAGVTQA MFPEGGLSLS
301 GGLGRPKLGL LKYIVDGAIP EGRDVVFVPV SINYDRVLED TILTAAASRG ERRFRARIGV
361 ITMWFLKQMW WRMTGRFHRF GYAAVSFGRP LSLSEFRVRT KGDPTVPLAR ELMSRIGVVV
421 PVLPVPLVAW LILRNGPMTR SALAAGFDKV LAALPHAHIH MPRDDRHYAI EVGLRQLIER
481 RIIVETDGRF GPGTERQDLL TYYAASIAHL MDGGAAYAEE LSAIAGS
SEQDB ID: 3101377RH
Reference:
3101377
Name: crotonyl-CoA reductase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ccrA
Sequence:
1 MALDTDSGIA SYAAPEKDLY EMGEIPPMGF VPKKMYAWAI RKERHGDPDT AMQVEVVDVP
61 TLDSHEVLVL VMAAGVNYNG VWASKGVPIS PFDGHGQPYH IAGSDASGIV WAVGDKVKRW
121 KVGDEVVIHC NQDDGDDEHC NGGDPMYSPS QRIWGYETPD GSFAQFTNVQ AQQLMPRPKH
181 LTWEEAACYT LTLATAYRML FGHEPHDLKP GQNVLVWGAS GGLGSYAIQL INTAGANAIG
241 VISDESKRQF VMDLGAKGVI NRKDFNCWGQ LPTVNTPEYA EWFKEARKFG KAIWDITGKG
301 VNVDMVFEHP GESTFPVSTF VVKKGGMVVI CAGTSGYNLT FDVRYMWMHQ KRLQGSHFAH
361 LKQAMAANQL MVERRLDPCM SEVFTWADLP EAHMKMMRNE HKPGNMSVLV QSPRTGLRTL
421 EEVLDARG
SEQDB ID: 3101377RJ
Reference:
3101377
Name: autoinducer-binding transcriptional regulator, Isotype: LuxR
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: luxR-1
Sequence:
1 MGRKVNLNPI LEDLDATSAL EDLERVTIKL RDTLEIDHIV YHWVDSAGDQ YGCATYPKAW
61 QERYLERNYH RIDPVILGCF QRFHPVDWKR LDWSGKVAKA FLQDALKHGV GNQGYSIPIR
121 GPNGQFALFT VNHVCDDQAW SEFTEIYGRD LILIAHFFNR KALEFERSRQ PDQPRNLSPR
181 EVDAMTLLAL GYSRAQVAHS LSISEHTLRV YIESARFKLG ALNTTHAIAT AMSRGLIVV
SEQDB ID: 3101377RK
Reference:
3101377
Name: autoinducer synthesis protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLRYLYADEL HQYPKLARSM FLDRADQFKT RLGWDVHVNE DGEERDQYDA LNPLYVIWEE
61 PDGSHGGSMR FLPTTGPVMI NDVFGHLTGG SPICSPLIWE VTRFCMSRRA SSRVAGAIML
121 SGGEVMEGFG LTHIAGVFDE RMIRIYRLIG SSPEVLGSEG EGRDRISVGL WPFSPADCAR
181 VSERAGISRE LSRLWFNRAF GKVNRRRFAQ TG
SEQDB ID: 3101377RL
Reference:
3101377
Name: ATP-dependent helicase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAVIGKAGSG KTLLLAELCK ALTTAGVQVV SGDYEGRKSK DRRTLAVLAP TNKAASVLRL
61 RGVPATTIHR ILYTPVYDPD YERIAEWLAG NGERPEIEGL SDEALDRAAA FYARNSSIPG
121 ALAAAGLRGS DFITGWKRRE EPLDIGFIDE ASMLDDRQFE DLKEIFPTLI LFGDPAQLAP
181 VNQSGSMVFD ALPEPRKLTL SRIHRQEADN PILDLAHALA DPAVDFEAFE RMVEDKARQD
241 DRVVWGGRVE VDLMARSPVL VWRNATRIRL INAFRSVHGA PETELLEGEP LICDGIELPL
301 KHRKKRLDLE ARGLIKGAQV IYLGPGRKPG FSRLHVMGAE DPQVSAASIV KIEKPDEEEP
361 FIPFAARMGA TFLHGAAVTI HKAQGSQWET VQVFAPDIYA AARAGRVEAG QPLWKRLAYV
421 AITRAQERLI WVVRNRLSKP TYPLRVDDLR QAAAPVLTLE EEQEA
SEQDB ID: 3101377RM
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAPQGGIEMH RILLAALLLL AAPLTATATE EQVVLGLSRD RVAITADFDG SDILIFGAIK
61 RETPIPDGDP LQVIVAVSGP SAPVLVRRKE KKLGIWVNTD SVLVDSAPSF YAAATSAPFS
121 QALSDTEDLR HRVSIRRAIR SVGADMNIAD AQEFTRAVMR IRQNEGLYSI RENTVAVDEQ
181 TLFRTEIDMP ANLTEGEYIA RIFLTRGGRV VSSFQTTIDV RKVGLERFLF NLAHQQPVLY
241 GLMSLAIAIA AGWGASAAFR ALRGN
SEQDB ID: 3101377RN
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAGHAGLTKN MQIYLPIAEV SVNAFLLLGL GGMVGILSGM FGVGGGFLMT PLLFFIGIPP
61 AVAVATEANQ IVASSFSGVL AHFRRRTVDF RMGTILLIGG LSGAALGVVL FNYLKSLGQV
121 DLLVKLCYVV FLGIIGGLMF IESLNAIRKS RKAGGAVPKR RQRGWIHAMP FKMRFRTSGL
181 YISVIPPIVV GLLVGVLSAI MGVGGGFIMV PAMIYLLGMP TKVVVGTSLF QIIFVTAFTT
241 MLHATTNYTV DVVLAVLLLV GGVIGAQIGT VIGARMKAEQ LRILLAGLVL AVCAKLALDL
301 LLMPSELYSL GASGGH
SEQDB ID: 3101377RP
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MMDFLTIIQV LDSTIRLSTP LLLACLAGLY SERAGIFDIG LEGKMLMAAF FSAAVAAVSG
61 SVWLGLLAGI ASSLVLAGLH GLASITFRGN QLISGVAINF LAAGMTVLVA QDWFKQGGRT
121 PSLFGGARFE PIDWPLAETL SGIPVLGPIY AELLSGHSVL VYLAFLAVPG TWWLLYRTRF
181 GLRLRAVGEN PAAVDTAGVS VVGLRYAAVM ICGVLCGIAG AYLATALQAG FVKDMTAGRG
241 FIALAALIFA KWRPLHAMWA CLLFGLLQAV ALRFQNIDLG GVVIPVQVMD ALPYILTVVI
301 LAGFVGKAIP PRAGGEPYVK ER
SEQDB ID: 3101377RQ
Reference:
3101377
Name: sugar ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDKMPKWADV VLIPLISLIL AAILSALVIL GIGEDPVAAV NMMVSGALGS TYGWGYTLYY
61 ATNFMFTGLA VAVAFHARLF NIGGEGQAML GGLGVAMICL YIPWPHWTMA LLAACAASML
121 FGAVWAAIPA YLQARRGSHI VITTIMFNFI AAALLNYMLV NVMRPDGSMD PASERFPAAV
181 HLPTLHELLA PIGISFSKAA PANVSLLVAV LACVVVWALI WRTRLGYEIR AYGHSESGAL
241 YAGISPFKIT MVAMLISGAL AGLMATNNVM GEAERLVLNS TEGAGFIGIA VALMGRSHPF
301 GVFLAAILFG FLYQGGAELA LWTNIPRELI VVIQALVILF TGALDNMVRM PLEKVFLALR
361 KGNA
SEQDB ID: 3101377RR
Reference:
3101377
Name: sugar ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTVPAIELKG ISKSFGPVQA NKDISISVAP GTIHGIIGEN GAGKSTLMSI LYGFYKADKG
61 EIWINGKKTE IPDSQAAIAA GIGMVFQHFK LVENFTVLEN IILGAEDGGL LKPSLAKARR
121 TLAELAAEYE LNVDPDAVIE EIGVGMQQRV EILKALYRQA EILILDEPTG VLTPAEADQL
181 FRILHRLKDE GKTIILITHK LREIMEATDT VSVMRRGEMT ATVKTAETSP EHLAELMVGR
241 KVLLRVDKVP AKPGKPILEI ENLRVTDEKG VERVKGIDLT VRAGEILGIA GVAGNGQSEL
301 LEVLGGMRPG SGAIRLNGAP LPLSGPGSDA RARRTAHVAH VPEDRQREGL IMDFHAWENV
361 AFGYHHDPAY QSGIFMNNAA LRADTERKIE KFDVRPADGW LAAKNFSGGN QQKIVVAREI
421 ERNPDLLLVG QPTRGVDIGA IEFIHKQIVA LRDQGKAVLL VSVELEEIFG LADRIAVMFD
481 GHIMGERLPD ETDEKELGLL MAGVNGEAA
SEQDB ID: 3101377RT
Reference:
3101377
Name: sugar ABC transporter, Subunit: periplasmic sugar-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLMKSLMGA AAAMALTAGA ALAEPALIFD LGGKFDKSFN EAAFNGAQRW AEETGGSFRE
61 IELQSEAQRE QALRRFAEAG ANPVITMGFA MADPLSAVAA DYPDTKFVAV DVTWLDAPNI
121 RQIGFAEHEG SYLVGMMAAM ASKSGTVGFV GGMDIPLIRH FGCGYAQGVK AVNPDVKIVA
181 NMTGTTPAAW NDPVKGSELT KAQISQGADV VYAAAGGTGV GVLQTAADEG ILSIGVDSNQ
241 NHLHPGKVLT SMLKRVDVAV YDAMKAGENL ETGVFNMGLA EEGVGYALDD NNAALISGEM
301 KAAVDQARQD IIDGKLNVVS YYENDSCPAL KF
SEQDB ID: 3101377RU
Reference:
3101377
Name: ribosomal protein-Ala acetyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTPTELARLH ARAFTQSRPW SESEFAALLG NPHTHLVGDL RCFALFQVIA GEAELLTIAT
61 DPDQRRQGLA RACMDAWQAQ AARAGATRAL LDVAADNDPA IALYTACGYA PCGLRRGYYR
121 RPSGETADAI VMERPLP
SEQDB ID: 3101377RV
Reference:
3101377
Name: protease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPSDPVILAF DTSAAHCAAA LLVGDRIVAA TAEEMTRGQA ERLMPLLEEV LAGAGLGWHD
61 LDAIGVGIGP GNFTGIRISV SAARGLALGL GIPAVGVDGF EARALLTPLG VHPAIPAPRD
121 HVYLAPDGGT PQLLPRDQAE ALGPLQAEYS PQGLAEAIAR AAAPRWRDAT IPPAPLYVRP
181 ADAAPSRDRP PVLLDP
SEQDB ID: 3101377RW
Reference:
3101377
Name: nifU domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFIQTESTPN PATLKFLPGQ TVLEVGTADF PSAEAAEKSP LAARIFAVSG VTGVFFGNDF
61 VTVTKAEGVE WDHIKPAILG AVMEHYQSGQ PVMGADAQTG SGHAEHSGED AEVVTQIKAL
121 LDSRVRPAVA QDGGDITFHG FDRGVVYLHM QGACAGCPSS TLTLKMGIEN LLRHYIPEVT
181 EVRPVAV
SEQDB ID: 3101377RX
Reference:
3101377
Name: acyl carrier protein phosphodiesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKLLQIIAS PRGGDSKSNA LADAFVAAQR AKDSTLQVDH LDLWAEDLPA FDGDPAAAKM
61 TFFGVGQMDP SKEQAWSAVA RITERFMSAD HVVMGVPMWN GGIPYRLKHY IDIITQPGML
121 FGFDPDNGYS GLLRNRKATV VTTSGVWSEG ADARFGSDFH STYLKWWFET IGITDVTFVR
181 YQPSLLTDDP QAGYDRALAA LTAA
SEQDB ID: 3101377RY
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQTALPPPYL IADDPGLELL NSTGAPYGTE IDWLQNGTEM LAWMQAVGLL GATEAELVRS
61 TLGARELDAA ASDLRDLRAM FRENVPVASA GFVDRLNACL AETSGHARIV MTEAGTQELQ
121 HVQRFRTGRD LVGLCALAIA ELLSQGESGR TRQCGGPTCT YWFRDVSKNN RRRWCSMAVC
181 GNRAKVATHR ARARSE
SEQDB ID: 3101377T
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIGEDEFDDD DELEMFVEAQ DTVWPDVLRE LTLGQKTSHW MWFVFPQLAE LGQSHMAQLY
61 GIGDLDEAAA YLAHPALRAR LIEVSRLMLT HAGKRPDDIL GSIDAKKLRS SMTLFAAVPD
121 APGEFRAVLE AFYDGSPCPL TLRALGG
SEQDB ID: 3101377TA
Reference:
3101377
Name: 2-hydroxychromene 2-carboxylate isomerase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGKRIAFWFE FASTYSYLSA MRIERAAADL GVTIAWEPFL LGPIFAAQGW TSSPFNLFPA
61 KGRYMWRDME RLCARQGLPL TRPDPFPQNG LPAARLAMVA REMGHIAPFV RAVYAAQFGR
121 GLVISDPQVL AECWAEAGLP PEAMEQAKSP EIKAALFAQG ERAAALDLFG APSFVVGEEV
181 FWGDDRLDQA LALAAQS
SEQDB ID: 3101377TB
Reference:
3101377
Name: universal stress family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MWRTEMRKFL VVLDDSRECL NAMRFAAMRA AHTGGGVAIL SIIPPDEFNH WIGVGEVMRE
61 EARERIHAHF EVFAKWMRDK QGVEPELVIR EGEAVPEIIA HVQEDPEIGV LVLGAGTDKK
121 GPGPLVSQLS RSSGSLPIPI TIVPGDLSKE KLEAIT
SEQDB ID: 3101377TC
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIAQIGDPRR DLLTLAVGAL GALIATLVHM PMALLAGPAV AVSLAGLCGL SLHISPRLRD
61 AGFLVIGLSI GSLVGPESIE AMMRWPVAFG LLAGLTLATP WAGRWLIPRL LPIDRDEAFL
121 AAAPGHLSLV IALADSLQLS LTRPVVLASI RLMALTLLVP LAASLAGIEI GPGLPQLAAV
181 TPWAWILGQI VAALLLAPVL KALKLPAHVL IAGIVVAATT HLAGWTAGGL PGWAAQASLI
241 LMGAMIGSRF GGMGWRELRQ SLTAGLAIVV LTTGLATLAA LPAAYLSGLP LLDVLLGFSP
301 GGLETMIILS AALGADPSFV AAAHLFRLSV LAVVLTLYAT DVARRGQGKS DGQR
SEQDB ID: 3101377TD
Reference:
3101377
Name: aminotransferase, Isotype: class IV
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATGSNIRTY FQGSWHEGDA PIIRAADHGA WLGSGVFDGA RYFDGMAPDL EAHCARVNRS
61 AEALMLTPTV STQDMVEIVR EGLKAYGPDQ AVYIRPMYWG IDGDPTAIIP QADSTGFAVC
121 LEEIPMAPAT ASATLTTTRF RRPVLEDAVV NAKAGCLYPN NARMLREARS KGFTNALVAD
181 ALGNVAETAT ANIFMVKDGE VFTPIANGTF LAGITRARHI KNLRADGVPV HETVLSFADF
241 HAADEVFMSG NMSKVTPVTA LDDTQYQIGP IARRARALYW DWAKSTA
SEQDB ID: 3101377TE
Reference:
3101377
Name: transcriptional regulator, Isotype: AsnC-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDQIDHRIVR ALQRDGRMTI SDLADKVGLS PTPCARRLER LQRDGVITGY SARVDPAKLG
61 LGVSVFVSVE LERQERAAVD AFERAIRTCD EVMECYLMTG SRDILLRVLV ADLAAFDAFL
121 ENRLMQIPGI RNLRSNFALR TMVQRDSLPA IRR
SEQDB ID: 3101377TF
Reference:
3101377
Name: Glu/Leu/Phe/Val dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQITPVAAPE HEQVVRIADP ESGLLGFIAI HSTRRGPAAG GVRMRPYAQE ADALNDALRL
61 SRGMTYKNAA AGLDLGGGKA VIMADPATQK TPDLLAAFGS AVETLAGRYW TAEDMGMTPA
121 DMARIGTRTT CVAGLADGDF ASGDPSPITA RGIFYAIRTA AKHRLGSVDL TGRTVAVQGL
181 GHVGHYLCGY LHQAGANLIV TDIDRAQVAR VAERYGATAV APDAIYGVEA DIFAPCAIGA
241 ILNAETIPQL KVRVVAGGAN NQLATPEDAT RLHDLGILYA PDYVANGGGI INVATEILKI
301 SGREAWVASR LAALDDTMDR ILTRARILSV SPAEVADATV DEILQAKAA
SEQDB ID: 3101377TG
Reference:
3101377
Name: biphenyl-2,3-diol 1,2-dioxygenase, Isotype: III, Class: EC1.13.11.39
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: bphC3
Sequence:
1 MTYSAPAGTC VGHVHLKVSD LDRAIAFYRD VLGFEVQQRY GDAAAFLGAG GYHHHIGLNT
61 WHSRGGPQPP ARATGLYHSA FLYPDRKALG TVLRQVIEAG IPIDGSADHG VSEAVYLRDP
121 DGNGVELYRD RAPEDWPRDG EGNLAMTNAP LDIPALLAEA G
SEQDB ID: 3101377TH
Reference:
3101377
Name: Trp-tRNA synthetase, Class: EC6.1.1.2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: trpS
Sequence:
1 MTETQFTPRV FSGIQPSGNL HLGNYLGALK RFVDMQGPEM ETVYCMVDLH AITVWQDPKE
61 LAHSTRELCA GFIAAGIDPE QSILFNQSQV PEHAQLAWIF NCVARMGWMQ RMTQWKDKAG
121 KNQQNASLGL FAYPSLMAAD ILIYHATHVP VGEDQKQHLE LTRDIAIKFN NDFGVDFFPV
181 TEPVIEGAAT RVMSLRDGTK KMSKSDPSDM SRINMTDDAD AIAQKIRKAK TDPDALPSEI
241 DGLEGRPDAR NLINIYAALA DRSVEQVLAD VGGKQFGEFK PMLAELAVAK LSPISSEMAR
301 LMNDQAEIDR ILARGAERAR AITAPILKRT YEIVGMVS
SEQDB ID: 3101377TJ
Reference:
3101377
Name: rhomboid family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPENTRGVNW VSVMMGNSRL ENSVPVAYPW GKGTSTAAKG PPMSSDNDTS PVNPLPPVVV
61 ALVLFIMGIE ITFSLGARGI VGGPQAVGWR LAAMQSYAFS PDILTWMWET GRWPVEHVIR
121 LVSYPFVSVS FTQSLFVCVF VLAMGKMVAE SFGSLAMLVV FLVSGIGGAL GYALLTGSPV
181 ALIGGFPPVY GLIGAFTWLL WRKLSLVGQH QARAFSLIAF LMGAQLLFGL LFGGGLDWVA
241 DLAGFATGFA LSFLLSPGGW ARMRGRIRHD
SEQDB ID: 3101377TK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRNEGTLDR AARIILGLVL LSLTVIGPKT MWGLVGLIPL LTGLVGSCPL YTILGLNTCP
61 LKK
SEQDB ID: 3101377TL
Reference:
3101377
Name: cyclic nucleotide-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSALDCPAGT VLFRAGQDCP GFLRLDEGSI RVTLTAANGR EVVLYRVRPG DVCLQTFACL
61 TEGRSYSAEG VAETRVRGHL MSHADFRTAL ARDEAFRTEV MQAVARRFAD FEHLVEDVAL
121 TGFDTRLARV LLRLAKGDTV AATHEALAAE TASGRAFVSR RLAEFARQGL VELARGRVTL
181 CDRSGLERIA AEER
SEQDB ID: 3101377TM
Reference:
3101377
Name: integral membrane protein, Isotype: MviN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mviN
Sequence:
1 MKPIRLMAGF FTVGFWTLAS RILGFAREIL LAAYIGPGPV MDAFVAAFRL PNLFRRFFAE
61 GAFNAAFVPM FSKRLEGGED AEGFAQQAFN LLGAAVLTLV ALAMIFMPAL IWATASGFVG
121 DERFDLAVGY GKIAFPYILF MSLAALFSGV LNATGRFAAA AAAPVLLNVF ACAAMLAGSA
181 LGGEVIDWLI WVIPVAGVAQ LALVWVAAER AGIRLRPGLP RLSPAMRRLV RVAFPAALAM
241 GVTQINLVVG QLVASRTESA VSWLFTADRL YQLPLGVVGI AVGIVLLPDL SRRLRAGDDT
301 GAREAYSRAG EFSLILTLPS AMALMAIPLP LVAVLFQRGA FTPEDSAATA IAVAIYGLGL
361 PAFMLQKVFQ PLFFAREDTK SPFRYAVVAM VINAVLAFAL YPLLGWIAPA IATTVAGWTM
421 VAQLALGARR MGEVARFDTR FHGRAWRILM ASLIMGAALY AVLIPLGWVF DLPSWRYLGL
481 LALILFAAVV YFGVGHLIGA FRLSEFRRAL RRS
SEQDB ID: 3101377TN
Reference:
3101377
Name: protein P-II uridylyltransferase, Class: EC2.7.7.59
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: glnD
Sequence:
1 MFDTPAVFAR ITEAAAEAAD NAALRGAVVA ILRDVQNAGR AAIAEGFAED PFAARPLTRA
61 YTYLTDGMVK TAMYVASEIL HPLATPTQGE RIAVLAVGGF GRGEMAPFSD VDLLFLTPYK
121 ITAWAESVIE SMLYILWDLR LKVGHSSRTV KDCIRLGRDD FTIRTAMLEH RFLAGHAPLA
181 RSLDQRLKSE LYKDTQREFI EAKLEERDAR HRKQGERYMV EPNVKEGKGG LRDLQSLYWI
241 AKYIYEVKET AELVPLGLFT PSEYRTFVQA EEFLWAVRAH LHLVTGRATE QLTFDLQVEV
301 AARMGYQDRA GRRGVEVFMQ KYFREATRVG ELTRIFLTKL EAAHMKGAPL LERIFRRRRR
361 IKQGYKVVRG RLDVVDPEAF LADKLNLLRI FEEALRTGML IHPDAMRLVT ANLDLIDDGM
421 RNDKEARRIF LDLLLKHGNP ERALRRMNEL GVLSAFVPEF EPIVAMMQFN MYHSYTVDEH
481 TIQTIVNLAQ IEKGELVESL PLASSILKAG VNRKVLYVAL LLHDIGKGRP EDHSILGARI
541 ARKVAPRLGL SKADCETVEW LVRYHLLMSD MAQKRDISDP RTVRDFAKAV QTTKRLDLLT
601 VLTVCDIRGV GPNTWNNWKA TLLRALHAET KRALEMGMEA LNREGRGNEA KKALRTALSD
661 WPAGEVKTEI ARHYPPYWQG FNVETHVTFA EMLRQLEHSG DPGGIEIRLD PDEDRDATRA
721 CFAMADHPGI FSRMAGALAL VGANVVDARS YTTKDGYVTD AFWIQDAEGH PYEAARLPRL
781 SQMILKTLKG EVVARDALKS RDKIKKREKA FNVPTHITFD NEGSDIYTII EVDTRDRPGL
841 LYDLARALAA ANVYIANAVI ATYGEQVVDS FYVKDMFGLK YHSEAKQRTL ETKLRKAITE
901 GAERAAAS
SEQDB ID: 3101377TP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MFAVFNPARK IALSAMALAA AALLSACEPV AIGGGGPSIN TSKPVPVALL VPRGSAQSGD
61 AVLAQSLENA ARMAIADLQN VQIDLRVYDT AGDAGTAAAV AKQAVGEGAK IILGPVYAQA
121 ANAAGLAVLN QNVNVLSFSN NVNIAGGNVF VLGPTFNNSA DRLVSFAARQ GKGNIVVVHS
181 TDEAGQLGRA AISDAISRSS AKLAGTVAYE RSQQGVINSV PQVKATVDGT GADSVFFTST
241 TAGALPLYTQ LLPEAGVSPA QTQFIGLTRW DIPAQTLELP GVQGGWFALP DPSKAAAFRA
301 RYQSTYGGAP HPIGGLAYDG IAAIGALVGA GKSDALTGAA LTQSAGFQGV GGIFRLRPDG
361 TNERGLAIAT IQNKQVVVID PAPQSFSGAG F
SEQDB ID: 3101377TQ
Reference:
3101377
Name: tetrapyrrole methylase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MNYQKLRLPA GLYFVGTPIG SARDITLRAL DVLASAEVIA AEDTRSLRHL LDIHGVPLDG
61 RRVLAYHDHS GAGAQARLLE ALAEGKSVAY ASEAGMPLIA DPGFELSRAA AEAGHMVTCA
121 PGPSAVLTAL TLAGLPTDAF FFAGFLPNAA AARKTRLETL RGVPGTLVFY ESPKRLAASL
181 RDMAEVLGGE RPAALCRELT KKFEETRRDT LAGLAEALAE APVKGEVVLL VDRARSGPVK
241 DSDIEQDLLA ALETHSVRDA ADLVARMHDV PRRPVYQLAL KLGKG
SEQDB ID: 3101377TR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKALASRGTR NHLAGEAAEN SVLRDYERRG YHLVRRRWRG RCGEIDLIAR SGDEVVFVEV
61 KQSRDFARAA ESLGARQMKR LHAAAAEFLA EEPDGQLTPM RFDVALVDGT GRLEIVENAF
121 GHG
SEQDB ID: 3101377TT
Reference:
3101377
Name: glutathione synthetase, Class: EC6.3.2.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gshB
Sequence:
1 MKIAFQMDPI GAVNINADSS FRLAEEAQAR GHELFYYGPD QLAYQEGRIT ARGHDMTVQR
61 VAGDPAVLGP LREVDLAEFD VVWLRQDPPF DMHYITSTHL LDRLKGQTLV VNDPFWVRNY
121 PEKLLVLNFP ELTPPTTIAR DLDTIRAFKA RHGDIILKPL YGNGGAGVFR LDENDRNLSS
181 LHELFVGFSR EPLIVQKYLP DVRKGDKRVI LVDGEAVGAI NRVPAEGEVR SNMHVGGRPE
241 KIGLTDRDRE ICTAIGPLLR EKGQIFVGID VIGDYLTEIN VTSPTGIQEL ERFDGGNIAG
301 RIWEAIEAKL
SEQDB ID: 3101377TU
Reference:
3101377
Name: competence protein, Isotype: ComM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: comM
Sequence:
1 MVARAHTVAF QGVEARPVEV QCAVTPGLPA FSIVGLPDKA VSEARDRVRS ALSGMAIALP
61 SKRITINLSP ADLPKEGSHF DLPIALALLA ALEIVPADAA EATLALGELS LDGSLVPVVG
121 ALPAAMTAAA EDWLLLCPEA SSAEAAWVDA AKVIGATSLS AVVRHFTGQA PIDAARPGEV
181 SAAAFERDLR EVKGQERAKR ALEIAAAGRH HMIMIGTPGS GKSMLAARIP GILPPLTPVE
241 ALETSMIHSL CGLLDQGGIS RTRPFREPHH TASMAAIVGG GKGAKPGEIS LAHNGVLFMD
301 EFPEFPRTVL ETLRQPIETG EVMVARANAH VKYPCRFMLV AAANPCRCGY LSDPARACAR
361 VPVCGEDYLG RISGPLMDRF DLRIEVPPVA FTDLDLPPSA EGSAEVAARV AAARAVQTAR
421 FGGHPTLRQN ADAEGKALEE IATPDAEGRD LLLTAADRFG LSARAYHRIL RVARTIADLA
481 GEPDIRRPHI AEALSFRVSA KALN
SEQDB ID: 3101377TV
Reference:
3101377
Name: conserved domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPLMTYDLYI GDRSFSSWSL RGWLMLEKFG IPYRSHLVGL YSGTMAADLA PVAPARQVPA
61 LRTPDGIALG QSLAMAETLA ERHPEAGLWP ADPAARATAR WLCAEMVSSF TALRGECPMQ
121 LLHCYEGFQP GAGTLADLAR IETLWSHARA VSGAATGPLF GTYSLADVFY VPVAARIIGY
181 GLPVSAAARD YCLFLLGDTA VRQWRAMGLT VRYDPMPYGL DLPVRDWPVG TPGAARAVEA
241 GPSVNTACPY SGDPVSDFLE LDGRVWGFCN AFCRDKTVAD PGAWPKFTAM VAKG
SEQDB ID: 3101377TW
Reference:
3101377
Name: phosphoglycerate mutase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRLHLVRHG PTHAKSMVGW SDLPADLSDT GFLTRLAAHL PPQALVVSSD LRRAADTASA
61 IQGDRTRLPH RAALREIHFG AWELRRFAEI EAEDPEHIRA YWETPGDVRP PGGESWNEVC
121 ARVDAEIDAL IAAHPGADLI VVGHFGMILT QVQRALRLEA DQAFAHRIDN LSVTEITRLP
181 QGWEVGRINH LV
SEQDB ID: 3101377TX
Reference:
3101377
Name: cobinamide kinase/cobinamide phosphate guanylyltransferase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLYPKFTLVL GGAASGKSSF AEQMVVSTGK SRVYFASSQV FDAEMQAKID RHLVQRGPGW
61 TTIEEPLEPG PALSALSARD ICLFDCATMW LSNHLLAEGD LDAAQERLMA AIRHCPAQLV
121 MVSNEVGHGI VPENALARRF REAQGRLNIA LAAEADLVVL VVAGLPLALK GQLP
SEQDB ID: 3101377TY
Reference:
3101377
Name: RNA polymerase sigma32 factor
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoH-1
Sequence:
1 MALNDPQDKR MSRQAMKAEL LDAETELALA YAWRDHRDEA ALHRLITAYM RLAISMAAKF
61 KRYGAPMNDL IQEAGLGLMK AADKFDPDRG VRFSTYAVWW IKASIQDYVM RNWSMVRTGS
121 TSSQKSLFFN MRRVQARLER EAATDGLALD RHQLHQMIAS EIGVPLRDVE MMEGRLSGSD
181 FSLNATQASD EEGREWIEAL EDESEQAAEL VAHRHDTEQL RDWLIEAMQA LNERERFIVR
241 ERKLRDEPRT LESLGDELGL SKERVRQLEA AAFAKMRKSL EARSREVQHF LV
SEQDB ID: 3101377U
Reference:
3101377
Name: argininosuccinate synthase, Class: EC6.3.4.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: argG
Sequence:
1 MSAPKKVVLA YSGGLDTSII LKWLQTEYGC EVVTFTADLG QGEELEPARK KAELLGIKPE
61 NIHIEDVREE FVRDFVFPMF RANAVYEGLY LLGTSIARPL ISKRLVEIAA EHGADAVAHG
121 ATGKGNDQVR FELSAYALNP EIRVIAPWRL WDLTSRTRLL EFAEAHQIPI SKDKRGEAPF
181 SVDANLLHTS SEGKVLEDPG VEAPDYVAQR IVAVEDAPDT PEFIEVTFEK GDAVAINGEA
241 MSPATILTRL NELGGKHGIG LLDFVENRFV GMKSRGVYET PGGTILLEAH RGIEQITLDS
301 GAGHLKDSIM PRYAELIYNG FWFSPEREML QALIDKSQEH VTGTVRLKLY KGSARTVARW
361 SDHSLYSEAH VTFEEDAGAY DQQDAKGFIQ LNALRLKLLA TRNRRVAGK
SEQDB ID: 3101377UA
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQFFAAGLA LALCLIAPLR AASAGELIPE DILAAMRQAD VVILGETHDN PRHHLVQAEA
61 IAALQPGAVV WEMLTEEGAQ RLRRKAVNDP AELERILQWA ELGWPPLAMY LPVFEAADAP
121 VYGALVPRAA ARAAMETGAA AAMGADAARF GLTVPLAEAD QAAREADQQA AHCNAMPPEM
181 LPQLVAIQRL RDAVLARAIL RAQDETGGPV AVITGNGHAR ADRGIPVFLS RISPGLRVYV
241 LGQSEGGLIE GRFDAVIDSP AAPREDPCAA FDKS
SEQDB ID: 3101377UB
Reference:
3101377
Name: phosphopantothenoylcysteine synthetase/decarboxylase, Class: EC4.1.1.36;EC6.3.2.5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: coaBC
Sequence:
1 MLASKRILLI IGGGIAAYKT LDLIRRLRER GAAVTPVLTG AAEEFVTPLS VSALAGEKVY
61 RALFDLTDEA EMGHIQLSRS ADLVVVAPAT ADLMGKMAAG LANDLASTLL MATDTPVLIA
121 PAMNVRMWQH PATRRNHAQL AADGIRFIGP NEGDMACGEY GPGRMSEPLE IVAAIEAALG
181 DGPLKGKRVL VTSGPTHEPI DPVRYIANRS SGAQGTAVAR ALAALGAEVV FVTGPADVPP
241 PDGVEVVRVQ SAREMDAAVD AALPVDAGVF AAAVADWRVA SASDRKLKKS RDGLPVLEFA
301 ENPDILKRVS RMEAGRPPLV VGFAAETNDV IENATAKRLR KGCDWIVAND VSPATGIMGG
361 SENAVILITG EGAEEWPRMS KEAVADRLAR RIAETLVG
SEQDB ID: 3101377UC
Reference:
3101377
Name: deoxyuridine 5'-triphosphate nucleotidohydrolase, Class: EC3.6.1.23
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dut
Sequence:
1 MVAIRVIRDA GADTQVPLPS YETTGAAGAD IRANLPDRGS LTLAPGGRAL IPTGLRVEIP
61 AGYEIQIRPR SGLALKHGIT LPNTPGTIDS DYRGPLGVIL LNAGAEPFEV VHGERIAQLV
121 VAPVVQARFE LTEALGETER GAGGFGSTGR G
SEQDB ID: 3101377UD
Reference:
3101377
Name: molybdopterin biosynthesis protein, Isotype: MoeB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLLVLALAAG LWTMGHVMGV SRRARLVMLC ALFAVVLMLQ FALPVSHPLR AATGGSPALW
61 LLIGGFALLA FGYGSGVAWL KARAQGRPAE TTAKPGSFTE TELDRYARHI VLRELGGPGQ
121 KRLKQARVLV IGAGGLGAPA LQYLAAAGVG TIGVIDDDVV ENANLQRQVI HRDADIGKPK
181 VFSAEAAMLA QNPAIAVRPY HRRLTEEIAA DLFADYDLIL DGTDNFTTRY LANQVAVAQG
241 KPLISGALSQ WEGQLSVFHP AGDTPCYQCI FPEAPAPGLA PSCAEAGVIG PLPGVVGAMM
301 AVEAIKLITD AGAPLKGEML IYDALYGESR KIRLSRRADC PICGQG
SEQDB ID: 3101377UE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAKAARFGSA AGPIARFAAR GDPARGRRRE MSTETFHAEL ANYLGVGDLR SDYPDGGWSW
61 NRHRLTLGRY RVELTQDRQI VAQRPRGGGL IPSTQLAISG VRSFAEGERV SDDLCRLLSL
121 AAQSQVVPLS YRFGGRGRQP LHPMGQAIYL RPLLPIRDGA AMRTYLETVW PPCYPAQRDR
181 AFRPVPSPYE SLRDHHDRRK EILHEYLLRL LDYRGRMLLY RHAARVGKDI G
SEQDB ID: 3101377UF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGREEMAKT ETTKITPASF TEVLKSMQGP VSMTSLVKPQ LEQFWDAQEK LLAESERFTR
61 HWFERRHEAI RTALDAARSA TAADPANPAQ AMETVMDWQR HSVERLVEDA REWFDTVSRC
121 ADYVSKTEAE AVGETLNEAQ DLARKATKSA KSEPV
SEQDB ID: 3101377UG
Reference:
3101377
Name: Cys/Met metabolism PLP-dependent enzyme family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTKTNRPAGP MTTAIHAGEA PDPATLASAP PIHMSSTYVS EDVLGFSAHD LTPQSPYAYS
61 RWANPTVAML EAKIAAMQGT EACLCTASGM AAAAAIFFTF LSAGDHVIVS DVSYAGVAEL
121 ARDTLPRMGI AVSTVDMSDL AAVAAAIRPE TRLIHTETPV NPIGRLTDLA AISALARQAG
181 ALLSCDATFA SPLGMDTVAL GVDLTMHSVT KYICGHGDAV AGAVCGRADL VSRMRVEAAI
241 HHGGVLSPFN AWLIARGAAT LPLRMKAHAA GAHAVAEWLE ADPRVGRVIY PGLPSHPQAE
301 LAARQMSNMS AMISFQVGDA ATGERLARQM IERLEVIHYA VSLGHHRSLI FWMGTEGLME
361 TSFRLEGAQL EAYRAYAGDG IFRLSVGLED PEDLIADLDR AIA
SEQDB ID: 3101377UH
Reference:
3101377
Name: peptidyl-dipeptidase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTNPILADWQ TPFDIAPFDR IADSDFAPAL EVALAEHRAE IAAIADSPEA PTFANVIEAL
61 EAAGGALDRV LGVFFTVAGA DSNPAREELQ RAFSPQLAAH FSEISANKAL FARVAAVWEA
121 RADLELSDEQ QRVLMLTHRG FVRAGAALSG EAEARMKEIK ARLAVLGTEF TQNLLADERD
181 WFMDLSEDDL EGLPDFVTAA ARAAGQEKEA AGPVVTLSRS LIVPFLQFSP RRDLRERAYR
241 AWVARGANGG KTDNRAIATE TLTLRQERAA LLGYDSFAAY KLETEMARSP DRVRDLLMQV
301 WAPARARAEA DAEVLTAMMQ EDGINGPLEP WDWHYYAARR RKAEHDLDEA ALKPYLQLDR
361 MIEASFACAN RLFGLEFRPL DIALYHPDCR AWEVTRDGRH VAVFIGDYFA RGSKRSGAWC
421 SAMRAQAKFP RTQAPVVINV CNFAKGDPAL LSYDDARTLF HEFGHALHQM LSDVTYESVS
481 GTSVARDFVE LPSQLYEHWL EVPEVLAEFA THAETGAPMP AEMLEKVLGA ANFDQGFQTV
541 EYVASALVDL AFHDGPAPSD PMAKQAEVLA ELGMPHAIGM RHATPHFAHV FAGDGYSSGY
601 YSYMWSEVMD ADAFAAFEEA GGAFDPDRAE ALERHILSTG GSRDAEDLYL AFRGRLPGVE
661 ALLKGRGLIA A
SEQDB ID: 3101377UJ
Reference:
3101377
Name: D-isomer-specific 2-hydroxyacid dehydrogenase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKGSLMPANV LFSARSELWP VYQPLISTYL REMGIDFDLR RDFPPEEVDY VVYAPNGGLR
61 DFTPFTRLKA VLSLWAGVES IADNPTLTVP LARMVDHGLT QGMTEWVVGH VLRYHLGMDA
121 HIHGLNGDWR QDVPPLASQR QVTILGLGAL GEAAARALSA LGFQVTGWSR SPKELPGIAC
181 LHGPDGLDQA LARAEILVLL LPSTAATENT LNTQTLARLP RGARIINPGR GPLIDDDALL
241 AALDSGQVGH ATLDVFRIEP LPRDHPYWGH PNVTVTPHIA SETRPETAAQ VICENIRRGE
301 SGEMFLHLVD RSLGY
SEQDB ID: 3101377UK
Reference:
3101377
Name: rod shape-determining protein, Isotype: MreD
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mreD
Sequence:
1 MSYLEYTVKS TPSGLRKILY MNWPLTLLLI SVASAGFLML YSVAGGSFSP WAEPQIKRFM
61 AGLVVMTAVA MVPIWFWRNM AAVAYGGSLV LLVMVELFGA VGMGAQRWID LGFMRLQPSE
121 LTKITLVMVL AAYYDWLPGK KTSRPLWVLV PVLIILVPTA LVLKQPDLGT AILLLSAGGA
181 LMFLAGVHWA YFAAVIAAGV GLITAVFKSR GTDWQLLKDY QFRRIDTFLD PSSDPLGAGY
241 HITQSKIALG SGGWSGRGFM QGTQSRLNFL PEKHTDFIFT TLAEEFGFIG GISLLSLYAL
301 IIAFCVATAL ATRDRFSSLV TLGIAVNFFL FFAVNMSMVM GLAPVVGVPL PMVSYGGSAM
361 LVLLVAFGLV HSAHIHRPR
SEQDB ID: 3101377UL
Reference:
3101377
Name: penicillin-binding protein, Isotype: 2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: pbpA
Sequence:
1 MRRSARDMDK VQRVLTRRTL LLGGIQAAFI GGLAMRMRYM QVDQADQFRL LAEENRINIR
61 LIPPSRGELF DRNGAIIAQN TPSYRIVMVR EDAGDVDAVV ANLQRLIPLD PEELDRALAE
121 MRRSPPFLPV TLADQISWEH ISKVAVNAPA LPGITPEVGL TRVYPQASDF AHVVGYVGPV
181 SDYDLSQIQD PEPVLRIPRF QIGKVGLEAK QEDLLRGKAG AKRVEVNANG RVMRELDRRE
241 GKPGADLQLT VDSALQSYVQ ARLGQESAAA VVIDCETGDL RAIASAPSFD PNLFVRGISV
301 ADYRGLTEDP YRPLANKSVQ GAYPPGSTFK MITAMAALEA GITNPEETVY CPGFLEVSNR
361 RFHCWKRGGH GHMNLEESLE QSCDVYYYDV ALKVGIDRIS AMAEEFGLGV RHDIPMSAVA
421 RGLAPNRDWK ARVHGQDWLV GDTANASIGQ GFMLASPLQL AVMTARIATG RKVAPRLVKS
481 IDGVEQPSGA GEPLAVNQAN LRRLRKGMYA VSNNRRGTAY RSRILADDNR MAGKTGTSQV
541 RNITAAERAA GVIRNEDLPW ERRDHALFVC FAPFDNPRFA VSVVVEHGGG GSTAAAPIAR
601 DILLQALYDG FPPLESYPAK DRSRIEAQQE RLRRELRPVT RPEDKDRA
SEQDB ID: 3101377UM
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MDSLAPSRIW VMRLSYAGLA MVILFFHLLP LDTLPKRWAS PDLLLALTLA WSLRRPDFVP
61 PLLIAIVILL ADLLLQRPPG LLAALTVAGT VFLHSRFGNH GETGFVAEWL AVAVVLMAIA
121 LLYRIVLAIT SVDQAPLFLV ASQLVLTILI YPLVAGASQA VFGVRHLTPA DAETLGAR
SEQDB ID: 3101377UN
Reference:
3101377
Name: rod shape-determining protein, Isotype: MreC
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mreC
Sequence:
1 MAERTSLARD RSQREDYAGP LRRLLLGVLL LCLLGIFLVW RIDSPRVERF RAQVVDTVIP
61 SMDWAMVPVT GTINLIRDFQ SYQRLSEQNR ELRSELRQMR AWKEAALQLE QENARLLDLN
121 NVRLDPRLTY ITGVVMADSG SPFRQSVLLN VGARDGIVDG WAAMDGIGLV GRISGVGQSS
181 ARVILLTDAA SSIPATIQPS GQTALITGDN TAAPVVDFLE NRELVRPGDR VVTSGDGGVF
241 PAGLLIGQVA EDRTGRLRVR LSADYERLEF LRVLRHHGTE KIEDHGDVVG PPAPAAPDTS
301 ALTTPAEATD G
SEQDB ID: 3101377UP
Reference:
3101377
Name: rod shape-determining protein, Isotype: MreB
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: mreB
Sequence:
1 MGFFDNLSGL FAADMAIDLG TANTLVYVKG RGIILSEPSV VAYHVKDGVK KVLAVGEDAK
61 LMLGRTPGSI EAIRPMREGV IADFDTAEEM IKHFIRKVHK RSTFSKPKII VCVPHGATPV
121 EKRAIRQSVL SAGARRAGLI AEPIAAAIGA GMPITDPTGN MVVDIGGGTT EVAVLSLGDI
181 VYARSVRVGG DRMDEAIISY LRRQQNLLVG ESTAERIKTS IGTARMPDDG RGQSMLIRGR
241 DLLNGVPKEI EISQAQVAEA LAEPVQQICE AVMTALETTP PDLAADIVDR GVMLTGGGAL
301 LGDLDLALRE QTGLAVSIAD ESLNCVALGT GKALEYEKQL RHAIDYDS
SEQDB ID: 3101377UQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLSYQHIYHA GNLADVQKHA LLALALDYLT RKDKPLSYLE THAGRGLYHL DAAEAVRTGE
61 AGAGIGRAEG AAWFDPAHPM TRVLAAVRTD HGAMAYPGSP LVAAHLLRPG DMMHLAELHP
121 QEHAALEQAM AGYPARVYRR DGVEMAQSLL PPEPRRGMML IDPSYEVKSD YDRIPAVIAQ
181 LHRKWNVGVI ALWYPILTDE RHKVMLAALE RLDLPRVLRH EVRFAPAREG HRMVGSGMFV
241 INAPFGLADE AARLSGLFAQ L
SEQDB ID: 3101377UR
Reference:
3101377
Name: 2-isopropylmalate synthase, Class: EC2.3.3.13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: leuA
Sequence:
1 MTHVTDQDRV LIFDTTLRDG EQSPGATMTH TEKLEIAEML DEMGVDIIEA GFPIASEGDF
61 KAVSEIAKRA QNSRICGLAR ANFADIDRCW EAVKHAEKNR IHTFIGTSPL HRAIPNLTQD
121 EMAEKIHETV SHARNLCDNV QWSPMDATRT EWDYLCRVIE IAIKAGATTI NIPDTVGYTA
181 PAESADLIRR LIETVPGADD VIFATHCHND LGMATANSLA AVAGGARQIE CTINGLGERA
241 GNTALEEVVM AMKTRHDIMP WRTGIDTTKI MAISRRVATV SGFNVQFNKA IVGKNAFAHE
301 SGIHQDGMLK NRENFEIMRP EDIGLSGTSL PLGKHSGRAA LRDKLEHLGY EVGDNQLKDI
361 FVRFKELADR KKEVFDDDVI ALMRSGENAE QDHLQLVSMK VICGTGGPAE ATVEMEIDGK
421 DVSATAHGDG PVDASFKAIR ALHPNEAHLQ LYQVHAVTEG TDAQATVSVR LEEDGMIATG
481 ESANTDTVVA SAKAYINALN RLIVRREKAG PGADAREISY KDLT
SEQDB ID: 3101377UT
Reference:
3101377
Name: DNA-binding protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSETAPRQTT PIIGTRMREL RKARGLTLKQ LAAATGLSIG YLSQLERQAA DPSVRALNVI
61 STALGVGINW FFPDPDTVSD PEADLVVRAD RRRTLRFSSG VRDELISPNL SGQLELIVTT
121 FDPGAGSGAE LYAHRGEEAG FIVEGQLEVT VGARLVTLGV GDTVQFASTI PHRYHNPGPG
181 RTVMIWAVTP PYY
SEQDB ID: 3101377UU
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRNSSFLRAY GFWHWGEGLQ TVLFTWYMAF HVGLPASQIG FYQALVLSPF LLFTIAGGIL
61 TDRIGARRSF RAATVLFGLL LIGYGVLDHV FGFVPVLFFA YCLAAGVVSA VSNPAIDTFI
121 PDATPRRAQE NALLAANAHN MAKLAGNLTG LTLPLLHAVG GFGVNGLLML ASAASLRPVQ
181 PATRQGAPEP ELSERPSLRR LWAHFRECPE NFDILLSSAM LGLLVVPVGY ILLPLALRAN
241 FPGYGDLLAV MTVSSWLGAI AATWAIGRLS RRIGHPGRIA LLVWGGYACA LVTLPLVPGF
301 AWLCVLVAVL GMVKLGKAMV YGKYIRNCPD TLRGSVIAVE QTAFWGLATL GTFLLGWLVD
361 LIGLVPTIHL VALSVGLAAL ALALRGRLSG LTPAL
SEQDB ID: 3101377UV
Reference:
3101377
Name: MORN repeat protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTRNRRRIAF AAILAMATTA HAQQGQVLTT QDEIGGVYEG TFRGGLQHGT GTYRLPNGYE
61 YSGEWVDGEI RGRGVARFPN GSVYEGSFAQ GKPEGMGKIT FSDGGTYEGE WSNGVINGQG
121 VAVYANGVRY EGGFRDARHH GKGVMQSPGG YVYEGDWADG QKEGLGKITY PDGAVYEGGI
181 VAGQRHGEGT LTLPDGLVYV GFWADGQING KGTLTQANGD VYEGDLIAGR REGKGKVTYA
241 NGDVYQGDFT DDRREGQGIF TGTDGYSYAG SWVAGQIEGQ GRVTYPDGSV YEGNFRADLA
301 DGQGKITYPD GSSYEGEWVA GVIEGTGTAI YANGIVYKGT FKNAKNHGQG VMTYADGYRY
361 EGEWQDGVRH GQGKATYPDG SVYTGQYVNG QREGDGEIVM ADGFRYKGQW QSGKISGIGV
421 ATYANGDIYE GHFRNGKRQG EGTMKYASGQ EEKGNWDNGA LTKGAAASDG
SEQDB ID: 3101377UW
Reference:
3101377
Name: Gln-dependent NAD synthetase, Class: EC6.3.5.1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nadE
Sequence:
1 MADRFRITLA QLNPTVGDLA GNAAKARMAW EHGREAGADL VALPEMFVTG YNTQDLVLKP
61 VFHDAAIAMI EALAEECADG PALAIGGPLV EEGKLYNAYL ILKGGKIVSR SLKTHLPNET
121 VFDEVRIFDA GPLGGPYSVG NTRIGSPICE DAWHEDVAET LAETGAEFLL VPNGSPYYRD
181 KYDMRINQMV ARVVETGLPL IYLNMVGGQD DQVFDGGTFG LNPGGALAFR MPVFDEAITH
241 VDLERGSEGW QIVQGEVAPL PDAWEQDYRV MVESLRDYMR KTGFAKVLLG LSGGVDSALV
301 AAIATDALGP ENVRCVMLPS EYTSRSSLDD AEAVAQALGV RYDYVPISES RAAVTNTLAP
361 LFAGTEPGLT EENIQSRLRG LLLMALSNKF GEMLLTTGNK SEVAVGYATI YGDMAGGYNP
421 IKDLYKTRVF ETCRWRNANH RLWMMGPAGE VIRPSVIDKP PSAELREDQK DSDSLPDYPE
481 LDAILDILVD QDGSIADCVA AGFDRDVARR VEHLIYISEY KRYQAAPGAR LTPRAFWLDR
541 RYPIVNRWRD PS
SEQDB ID: 3101377UX
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPRSTGASRG RKLLVSGMCA MFNPLNAPPQ GVEMLKSPPR EIDEAEIDQF VQAVMRQEAA
61 APKPRKTLPE IAPAVPEAAA SEESEERKPR YQPKWRHSAA ILALALLIGW PGLLVALLGL
121 AVVVPVIAYL TLGHDRASEC VAAAFARFRR LDPVRAEILR GWAMRRVAGV ERVLSWLPER
181 WTSGLYLPDL RDTPVSHDKM RLDPFSRFQA EQAETPDAG
SEQDB ID: 3101377UY
Reference:
3101377
Name: AA deaminase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGPRPTDFY SDLALPKQVE VVVVGGGIIG VSAALELAER GVSVLLCEKG QIGAEQSSRN
61 WGWVRLGMRD PREIPLMQAA LEIWDGLDDR LGRSTGFVRS GILFAASGRR SVGNLERWAR
121 HVDGLETRAR MIEGAELAAH LPGHSKLPRA ALFMPQDGRA EPQWAAPAVA EGARDRGAQI
181 LTACAVRSVD VEAGQVTGVY TERGRVACSR VILAGGAWSR LFAGNAGVSL PQLKVLNTVL
241 RSSPTVEGPN AAYWSDGFAM RRRADGGFTI AAGTQNTVDL VPDSLRLAHR FLPAFRQEWR
301 SLRFRLSRRW LEEAQQARQW QPGDVTPFEL TRILDPEPSQ KHLRRAWNAA RRAFPMLDGS
361 EIMQSWAGMI DVTPDAIPVI SDVPALPGLF IATGFSGHGF GIGPGAGRLV ADLATGETPV
421 VDPWAFRLSR FSDGSRVAPD PGY
SEQDB ID: 3101377V
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKQQSATQVM VEGCFKMLGW RIFLYSIRMV LRNWRHALRL ALVPAILGSV AMMTIAWVMQ
61 SGPAFEQFFG AGLNDLDKTE MTRQHTLSSL LVLVPQAVAS LWIVITWHRF ILLEEAQDGW
121 VPPLRPGRTL AYFALSVGIV LIFAAVAFPV VYATVVLAAA LGLRGMAVAL TLAVLLLLSP
181 LSQRALLVLP ASAIGQPLSF GDALTLTRDH YWTMLIVAVS GSAMQHGLST VLSFVGGTST
241 VGPVAALFLT LLLQPLLWAS VLTTLYGVFV EKRPLG
SEQDB ID: 3101377VA
Reference:
3101377
Name: metallo-beta-lactamase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTLKLSRRAA LTGAASLPLA AAAAPVLAGG HGGKAAAPIA RSFKLGSMGV TTLLDGSLPR
61 DGAKDIFGGG ASDEDFARVS AENFIPADMA QFFFTPTLID TGAELVLFDT GLGQGGITRA
121 LDAAGVAPEA IDVVVITHMH PDHIGGMVTD GAPTFANARY VTGAAEYDFW SKAEAGNRVG
181 DLVKSHVTPL AEKMTFVEPG ASVAAGVTAV DASGHTPGHM GYMLESDGQQ LMLTADLANH
241 YVWSFAHPEW EVRFDMDKAK ATASRRAILG MLAADRVPMI GYHMPFPAAG YVETRGEGFR
301 FVPVGYQLMG
SEQDB ID: 3101377VB
Reference:
3101377
Name: Glu-tRNA synthetase, Class: EC6.1.1.17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: gltX-1
Sequence:
1 MSMTTTRFAP SPTGYIHVGN LRTALMNYLI ARKAGGTFIL RIDDTDPERS KEEYVDAIKQ
61 DLDWLGLHWD RVERQSERLD RYAEAADKLR AMGRFYEAFE TPTELDLKRK KQLNMGKPPV
121 YDRAALALSE GEKEALRAER GNGVWRFKLD QERIEWTDGI LGDISIDAAS VSDPVLIRGD
181 GQVLYTLASV VDDTDMGVTD VVRGSDHVTN TATQIQIMAA LGFEHPRFAH HSLLTGPQGE
241 ALSKRLGTLA LRDLREQGVQ PMALLSLMAR LGSSDPVELR SDMAELIEGF DVTRFGAAPT
301 KFDVQDLFPL TGRYLQALPL EAVAKDVAAA GVPEDLAAPF WSMARENITT LNDLAGWWAL
361 CRDGAEPLIA DEDRAFVTEA MALLPEGPLD ADSWGAWTQA VKEATGRKGK GLFMPLRKAV
421 TGMERGPEMA TLLPLMQVIR ARG
SEQDB ID: 3101377VC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADPYFFGYG SLVNLATHDF PDPRPARLFG WRRLWRHTDL RQVAFLTAIP DPECSIDGMI
61 AHVPDDDWEA LDAREWAYDR VAVSAHVRHD LKRPAEVAVY AVAPEKQSPP STRHPILLSY
121 IDVVVQGYLH AFGLEGVRDF FATTSGWDAP ILNDRKEPRY PRHQQLKAAE TDLVDRSLND
181 IGADIITAG
SEQDB ID: 3101377VD
Reference:
3101377
Name: rrf2 family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRITKRTNIA VRLLMFCAAH PGRLVTKSEI AEVCNVSENH LAQVINQLSQ LGFLTTQRGR
61 NGGMCLGMAA DAIRIGEVFR HVEGNLPMVE CFADADNSCP LTDACRLRLA LRDAAQAFYA
121 SLDEITLDAL VCDNTDLLKI LNPVVCAR
SEQDB ID: 3101377VE
Reference:
3101377
Name: ABC transporter, Subunit: permease
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSLRLAARLA RRELRGGLRG FRIFLACLAL GVAAIAAVGS VRSAIEAGLS REGAALLGGD
61 AQMGFTYRFA TPEERDWMQA RASRVSELVD FRSMAVVGAE RALTQVKAVD GAYPLLGSVT
121 LDPDLPLDQA LAGAKGLPGG VMEPVLSDRL GLQPGDRFRL GTQEFVLMAR LMQVPDGVAD
181 GFALGPRTLV RTADLAQSGL LAPGTLFDTK YRLDLPPDSD LASIAQDARG RFTDSGLRWT
241 DARNGAPGIA DFTRRLGAFL ILVGLSGLAV GGIGVSAAVR AYLADKTTTI ATLRTLGADR
301 RIVFQTYFLQ IGALSGLGIL LGLVLGGLAP LLLAPLIEAQ LPVPAVFAIY PEPLAEAAIY
361 GLLTALVFTL WPLARTEEVR AATLLRDALS RAPLLPRLRY VLATGAGLAL LCGLAAWFSG
421 ALALTLWTLG GIAGALLLLA IAASAVQALS RAAAPLARGR PALRWALASI SSPRQGAAPV
481 MLSLGLGLSV LAAVGQIDGT LRNAISGNLP DVAPSYFFVD IQRDQMPGFT ARLESDPGVS
541 RVESAPMLRG IITRINDRPA REVAGNHWVV RGDRGVTYSA ELPDTTRLTE GAWWPQDYDG
601 PPLISFAAEE GAEMGLQLGD TLTVNILGRD ITARIASFRE VDFSTAGMGF VMAMNPAALS
661 GAPHSNIATV YAEPDAEAAI LRDLASAYPN ITAIRVRDAI DRAAGLLAGL ASATSYGAGV
721 SLLTGFLVLI GAAAAGQGAR IYEAAVLRTL GASRRRILLS LALRSALLGA AAGTIALAAG
781 ILGGWAVSRF VFETSFTVIW PSAILIVLGG VLAVLGASLV FALPPLAARP ARVLRARE
SEQDB ID: 3101377VF
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPALVLED ARLSLEGNAG KVDILRGISL NVPAGQTLGL VGPSGSGKSS LLMLMGGLER
61 ATGGRVQALG HDLGAMDEDA LARFRRDRMG VVFQSFHLIP TMTALENVAT PLELAGHRDA
121 FARAAAELEA VGLSHRAGHY PAQLSGGEQQ RVALARAAAP RPAILLADEP TGNLDEANGA
181 AIMDLLFGLR DQYGATLVLV THSARLASRC DRVVRLRDGR IEDTESREAA Q
SEQDB ID: 3101377VG
Reference:
3101377
Name: acyl-CoA thioesterase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRKALIGLLL AGWGMAATAE PVVIAALGDS LTQGYGLVPE QGFVPQLQRW LMAEGAEVTL
61 INAGVSGDTT AGGAARVAWT LTPEVDAMIV ALGGNDLLRG IAPEVARGNL ATILTEAQRA
121 GVAVLLVGMQ APGNYGADYK VAFDAIYPEL AAEHSALLAP SFFAGLMAEG DPAAAAGLMQ
181 GDGIHPNAEG VARIVAALGP FVLDLVQAAE K
SEQDB ID: 3101377VH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPGRFFLTRP LTELADWLGC ALPDLGTQPP RRNIQPGQEV LVLTGQGLCP MRWGIVPVGR
61 VNARGRPVME TIINARSETV FDKSAFAGTG RAVIPVDGWY EWTGEKRRKT AWRISDAAGA
121 PLLFAAITDV WTAPGGQQLH QVAAVTCPPN ADVAPIHHRM GVLLSREDVP VWLNGDQTQV
181 QALMRPWPEG RLRIERATDV DWSAP
SEQDB ID: 3101377VJ
Reference:
3101377
Name: cold shock family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MATGTVKWFN TTKGFGFIAP EEGGKDVFVH ISAVERSGLT GLADNQKVSY ELKPGRDGRE
61 SAVDLKLL
SEQDB ID: 3101377VK
Reference:
3101377
Name: ErfK/YbiS/YcfS/YnhG family protein/tat domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MITRRTFIAA SAAAGTLPWA IQAKASDAFD PTPQVVRIKK QFEPGRLLIL PRSFYLYYVT
61 EEREAIRYGC GVGKAGLEFT GTATIDVKKE WPTWRPTPEM IERDPRTYAK FVDNNYIQPG
121 GPENPLGARA LYLFQNGVDT YFRIHGTTQP QTIGHAASNG CIRMLNEHVI DLYNRVPLGT
181 VVTVL
SEQDB ID: 3101377VL
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPTHNQTQIP SMTRVNHILI PGIVLLVSAL LVQISGLTLL LGAHPWWAHK VIWMGLPIGI
61 GLALIAGALR VPRRLRQIGF TLLTLVAFLI ATEGKTQFTA SFAENTAAGR AWYFGWIATC
121 ALITATAASL FRYSHQTD
SEQDB ID: 3101377VM
Reference:
3101377
Name: thioesterase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MQKQGHPAMT DPQPSGELTL RTLAMPRDVN VNGDIFGGWV LSQMDIAAGL TAGARAGGRV
61 TTVAVDAMKF IRPVGVGDVL CIYCQVVRVG RSSMAIEIEA WALRDRQGLR EKVTEAVFTF
121 VAIDEEGRPR PVDAAAAG
SEQDB ID: 3101377VN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEIIMQILVG IAGLSLAVLI YAWAYGRAHD PAAPAWARGQ LFASVASLVA TSLAPIGAGY
61 LTAGLLWPDG LSLVWGLPVA IGAVPVVWVF SLRLLRRGRD RAQSPTGLAR AMA
SEQDB ID: 3101377VP
Reference:
3101377
Name: thioredoxin
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGDKTLTCLA CGQLNRVPEA RLTAGAKCGK CGDGLLTGQA RDVDPAILEK AKKNDDLPLV
61 VDFWAPWCGP CRMMGPEYAK AAGVLAGQAR LVKLDTQKHQ STGGRYGIRG IPTMVAFERG
121 KEKKRQSGAM QSGQIVGWVR G
SEQDB ID: 3101377VQ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTGVEWMTLD RAVMMFAGFM VLLSVLLTAL VSPLWMWFTV FIGVNLIQSS VTGFCPAAMV
61 LKKLGFKTGT AF
SEQDB ID: 3101377VR
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAWIGVFLGT FAGLASSILA CVLWELPLWA ALLLYPLAGS AIAVAVILLF MLREIRVPAA
61 EPVTGGRTVN G
SEQDB ID: 3101377VT
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSIYVRPRVP GATIFFTVTL ANKGSGLLTD QIGLLRTTVW QTRRERPFHI DAWVVLPDHL
61 HAVWTLPRGD TDFSTRWGAI KARFTMGVRK AGFSPPPDLP VVRSGRYAGL KPGLRSEKRE
121 AGVWQRRFWE HHIRGPDEYL AAVSFCHNDP VKHGLVTDAK AWPFSTVHRK MQTSGEMCRA
181 GFSPPSVVGP G
SEQDB ID: 3101377VU
Reference:
3101377
Name: ABC transporter, Subunit: ATP-binding
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRFRPDLAP PTSAQTLAHC PATDVSVTGP ANRITNRSRP MAAYQYVYHM QGVSKSYPGG
61 KKCFENIHLS FLPGVKIGVV GVNGAGKSTL MKIMAGLDKD FTGEAWAAEG AKVGYLPQEP
121 HLDPNLTVRE NVMLGVKAKK DILDRYNELA MNYSDETADE MASLQDQIDA ENLWDLDSQI
181 DVSMEALRCP PDDANVESLS GGERRRVALC KLLLEAPDML LLDEPTNHLD AETIAWLQQH
241 LIDYKGTILI VTHDRYFLDS ITGWILELDR GRGIPYEGNY SAWLEQKAKR LEQEAREDKA
301 KQKTLERELE WMRQGQKARQ AKSKARIQAY NEMANQSERE KVGRAQIVIP NGPRLGSKVI
361 EVEGLSKHMG DKQLIEGLDF SLPPGGIVGV IGPNGAGKST LFKMITGQEQ PDAGSIEIGD
421 TVKLSYVDQS RDDLKDGDTV WEAITGGAEI IQLGDAQVNS RAYCSSFNFK GGDQQKKVSL
481 LSGGERNRVH MARLLKEGGN VLLLDEPTND LDVETLRALE DALVDFAGCA VVISHDRFFL
541 DRICTHILAF EGDAHVEWFE GNFEDYEEDK KRRLGPDALE PKRLKHKKFV R
SEQDB ID: 3101377VV
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIYVILKIYK NVNISAVRAL VPPDLGAKGH IKWGKTNMTC DSVKWTLTSG DVTVEVIATD
61 DGFGNITFTY ELVSGIADLN GFFIDIGNDG GDISKLSGGN NMKGSDSDGD RLDGFDIAEE
121 IGTVGGNDED TTSGTLTFTM AELGISSLAE LADAEIGIRA TSVGEDREDS LKLADTGTYC
181 PVEPPSDDDF PEWGQDISHV VFVFNQTVGD TSGDGYYTIK VDYTDALVAA QGNDLDDYID
241 DFLFALINDD TNVPFLEPDA DLMGVVIKGG LQTTEYYAYG DYNTNGTDPD PLPAGIGFAL
301 PGDKGTVDPV NEIDLALSVD DSGDFIFA
SEQDB ID: 3101377VW
Reference:
3101377
Name: MOSC domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPPQRRRVMT DLQTLIAGWA QPGRVGWIGL RPERRAALIA VDEGLVGLDG LAGDHGRPGK
61 RAVTLVQGEH LGAIGAYLGR GAVSPLDLRR NIVVEGINLS ALKGRAVRVG GAVLRLSVIC
121 APCSRMEETF GTGGYSAVRG HGGWCAEVLE PGLIKLGDPV RPAD
SEQDB ID: 3101377VX
Reference:
3101377
Name: nicotinate/nicotinamide nucleotide adenylyltransferase, Class: EC2.7.7.18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: nadD
Sequence:
1 MRQGFPYARP GQVIGLFGGS FDPPHAGHVH VTREALKMFG LDRVWWLVTP GNPLKAHGPA
61 PLDRRMEAAR AMMRHPRVDV TDIEAHLGTR VTADTIAALR RIYPRVRFVW LMGADNLAQL
121 HRWKDWRQII ETVPVGVLAR PGDRISARMS PAARAYAPYR IDGQARHLLG RAEAPAWCFV
181 NVPMVDVSST RIRAAGGWSA AQQGRGQTGT QDQ
SEQDB ID: 3101377VY
Reference:
3101377
Name: membrane protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGRAIGIMFI AMSLIPAGDM AGKLLTGTYG AAPIYVAWSR FALGLLMLMP FVPAAAWRLL
61 ANWRIWFRAL LLAGGILSIQ SALRTEPLAN VFAAFFVGPI LSYALSALLL REPVTMLRSA
121 LMLLGFGGVL LVVRPGFGGS PGLLLALLAG CFYGGFLTAS RWLSPLGSPL ALSLTQLAIA
181 GLVLMPFGLS ALPSFSPQVA ALTLASALGS MLGNLLLLVA YARAPATRLA PLVYFQLAAA
241 TGLGWAVFGD LPDLWTWAGL SLVLGAGLAS ALLRR
SEQDB ID: 3101377W
Reference:
3101377
Name: Thr dehydratase, Class: EC4.3.1.19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: ilvA
Sequence:
1 MSDFMTRARA AEQAMREVFP ATPLQRNDHL SARYGADIWL KREDLSPVRS YKIRGAFNAM
61 RKQPGQGLFV CASAGNHAQG VAFMCRHMGV RGVIFMPVTT PQQKIQKTRM FGGDQVEIHL
121 TGDYFDQTLA AAQAWCAQEG GHFLSPFDDA DVIEGQASLA VEIEEQLGGV PDHVVLPVGG
181 GGMSAGVATW FGDRSHCIFV EPEGGACLRA ALAAGHPVKL DHVDNFVDGA AVGRIGEKTF
241 ELLKSRHMSD VLVMPEDRIC TTIIEMLNVE GIVLEPAGAL SVEAVADVQS FVRGKTVVCV
301 TSGGNFDFER LPEVKERAQR YLGVKKYFLL RLPQRPGALK EFLNILGPDD DIARFEYMKK
361 SARNFGSVLI GIETARPENF ERLYARLDEA GFTYTDITRN ETLAQFVI
SEQDB ID: 3101377WA
Reference:
3101377
Name: D-Ala-D-Ala, Class: EC3.4.16.4
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: dacB
Sequence:
1 MVEAISRRVF LAGLGAALSH SAAYAEAPAL SLRPPLRLKD ARALAGPEAV LSGSGLSGRV
61 AFAVADAETG LELETVEPGL ALPPASVAKA LTALYALETL GPSHRFRTRV LADGPVENGV
121 LKGDLILAGG GDPTLDTDAL AALVRALKES GLREVRGAFK VYDGSLPEVF SIDPEQPEHV
181 GYSPAVSGIA LNFNRVHFEW KRAGKGWSVS MDARSAKIRP AVAIAEMKVV SRALPIYTYE
241 QRQRIDSWTV ASQALGQDGS RWLPVRKPAL YAGDVLQTLA RSNGIVLGRV EVVKSLPGGA
301 RTLVHHDSAP LEDILRDMLK YSTNLTAEMV GLAATVARGK RPATLRASAE EMSVWAAERY
361 GLRGSRLVDH SGLGDASRMT ARDLVAILVQ AGKTGRLPRM LKDIPMRDQK GRVVKGHPIK
421 VAAKTGTLNF VSGLGGFMTA ADGTVLAFAI LTADPDRRAA IPPEDRERPE GARGWNARSK
481 KLQQALIERW GAIYGS
SEQDB ID: 3101377WB
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTEQPTHPMT PQDCLVAIMM AVSASDENIR TAELVKIQSA VNMLPVFADY DIDRMKRVSQ
61 VVFDLFEQED GLDALFGLVR DNLPERLFET AYALACDVAA ADGTLAETEL RLLEEIRYEL
121 NIDRLHAAAI ERGARARHVV
SEQDB ID: 3101377WC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTAMLDSFAT DLTAATSLHQ PGNLPHPPHA IDAENVPLSG GTDPTYGEVR WRTLINGTEA
61 APRDMVLGIA EFGPGHQLRP HRHTPPEFYL GLEGSGIVTI DGVPHEIRAG VALYIPGDAE
121 HGTVAGPEGL RFAYGFASAS FEAIEYRFTA SA
SEQDB ID: 3101377WD
Reference:
3101377
Name: transcriptional regulator, Isotype: LysR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MERLPSFSGL TAFYAAARRG TLTAAAAELN VSQPAVSRRI AMLEADLGSP LFDRSHKPVR
61 MTQSGRDLLR ALQGGFGQIE AAVAQIRQAA QGKVVTVTAP SGFVAFWLIP QLGELEAAFE
121 DVTIRIISQE YGEATRPGDI AIRFGLPEDG TERRLLGDGV FPAASPLYLD RREMSGSDYD
181 FARMTLLTME SARSQWHDWP SWFRSVGMSM PQKARVLDFS SYAMLVNAAL AGQGVCLCWD
241 GVLDRFLEAG ALVRLEGPEA VSSRGYFMAA REGLAAAPHV RGILGWILEK SHK
SEQDB ID: 3101377WE
Reference:
3101377
Name: Lys-tRNA synthetase, Class: EC6.1.1.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: lysS
Sequence:
1 MLHWHNRTAG PGAWGALPSP METDMSNSRE LALASKAWPF EEARRVLKRY EKAPPEKGYV
61 LFETGYGPSG LPHIGTFGEV ARTTMIRRAF HEISDIPTRL ICFSDDLDGM RKVPGNVPNQ
121 DMLREHLQKP LTSVPDPFGT HESFGHHNNA MLRRFLDTFG FEYEFYSATE FYRSGQFDEI
181 LLRAAERYDD IMKIMLKSLR EERQQTYSIF LPIHPETGRV LYVPMKEVNA KDGTITFDDE
241 DGREWTLPVT GGNVKLQWKP DFGARWAALG VDFEMYGKDH STNTPIYDGI CRVLGVPAPE
301 HFTYELFLDE NGQKISKSSG NGVSIDEWLT YASSESLAYF MYQKPKTAKR MYFDVIPKAV
361 DEYHQQLRAY PTQDLAAQLN NPVWHIHGGD VPASTLIVPF GMLLNLASVS GAEDKEALWG
421 FIRRYAPEAS AESHPDLDQA AGFAVRYFND FVKPTRVYRA PIEVEREALE ELRAQLAAYD
481 GPVEDEALQS IVYAVGRDRF DPLRAWFGAL YEVLLGASQG PRFGGFIALY GIPETIALID
541 KALAGELV
SEQDB ID: 3101377WF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MEVGVTIPDE DKFQGRIHGE RPEPKDPENL WWRLLHMILI AIMINLAQTI LAVVTVVQFI
61 IMAVSKSQPN ERLADFGTDL GIWIAKAARF QTAASNVKPW PWTDLD
SEQDB ID: 3101377WG
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRQLLFILAC CVGLVGPAQA QSDEIKAVIG NQIEAFLADD FATAFTFASP MIREIFRTPE
61 NFGSMVRNGY PMVWRPAEIR YLGLEEREGT LWQLVRVTDR QGLAHVLAYQ MVNLESGWKI
121 NAVQVLETPP PSV
SEQDB ID: 3101377WH
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MILIGPLLHL GIRRQIGNRT PRFPQRPLWH HSIDSARLGP ERQGCIGIDQ PVVRCAGLVH
61 LQPQGVGAAR ADPMIGVPLI DQIPGPIEIQ PRETGVDPLG PVDVSIDRAE LVAGDCHAID
121 EMANPMRLDH DIAEPGRHLA RQKDIVGDAQ RAERESAIEV RVRVLFVSPF QAAIVDIVLG
181 KSRARVSPDQ YDTRCARPVV NGIALKEVVA QDHMVLPRHD GKMTEPGRPA MAQLDVVGIG
241 VEPDAAAVRH VQRLFRREKL APVDQHALTA TTDRGDSTIL WPTDKTIVKR ECSAVRSQPD
301 RAAMGVTLEL DVLHVELRQR AEAAEIQHVF EAAEGEDLGA CRIIERRVQC DLTGPHVFRA
361 HIDFAPDTRS RHQGTHRNIG DIRHVVQLTR VIGVICRLRD KGIGIPSGTR HRHQLPVADH
421 PSGRETGPVW NSRLHVDRRG DRHIAPAHVQ RFVIRPVQQR LKRLAKGGFL VTKGRDIGRK
481 IKILGQQQHL VDRHRHRALE IDLRCQADRL PQEISSARHE NAAPSGCAIG GLECGRVVGD
541 PIAHRTVITD IDLAQHVTQE RAGDIGDLDI VDPHDAAIRP FEIEAEMTIE RRRPPDHVDT
601 AAIAGSHDAR HLDHIAIAGQ RGRGPLFRHA ADMRTACRTG PPGDPNAGQV ATDRLDPDLD
661 LQVTARLQGR LPHIAQLLNR CGLLQFQAAA KIGIRRNKGR IRRPIIGIRP RRAVAARPHI
721 QPQLKGGRHE VDAVGDCLVH TNPFPNRATD DLPARFHVTG PGRTRTRQMG RTKGLIPAHS
781 TVTVTLPQTE GGGVSRT
SEQDB ID: 3101377WJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MARSGAARTR HMKARWQVVS GAIGKGICMN KAITDGINFM PPAFQLGLNV WSSGDGTPGS
61 DTYDGAPNAA FVPADADFGG CLELQKTASV QKLRYMGQTP LQPGCYLQIK VRIKAISGNL
121 PSVRVAGWAG AAGGAHVGGV TEQGPSTTLT SYGDVVEVTG IVGSGNRGGV DMVWGASALY
181 GHFGLDLEGS NGGIVRIDDI EITDITGAFL RDMLSQVDVR DYGAVGDGVT DDSAAFEAAD
241 SAAGGRRVFV PGGTYFLGQT VSLASEIDFE GTVTMPVDKM LLLTKNFDLP TYIAAFGDEE
301 TAFRKAFQAL LNGSDHESLD MGGRNVSVTA PIDMQAAVPN RTSFSTRRVI RNGQLVAVAG
361 PAWDTDTFIS QATYDPNDAR KLNNVTNIAN IPVGSLVTGA GVGREIYVRS KNVGAGEITL
421 NAPLYDAAGT QVFTFRSFKY MLDFSGFSSL SKFNMQNIEF QCNTHCSAIR LAPYGATFAL
481 YDCFISRPKD RGITSIGGGC QGMLIDGCQF LSSEEALNVP DRSSIGFNTN ANDVKLRHCR
541 ATRFRHFAVM AGQNHMILGN HFFQGDAVDN GPRTAGIVLI GTYSSATFAE NYVDNCSLEW
601 TNEQDPNPDF NGGFSFSALS ITDNIFLSGE VAPWFSYIVI KPHGVGHFIN GMTVTGNKFR
661 SINGYIDRAE RVDTSFSGLN FDRTRDLIYQ GNTYHGVSTR SANPLRLEVD QTSASDNWLI
721 NTDATLPFGA ETRGVDAVVP QGPLRESGGA VAYLAPYAQV QQGTNQDQLR LRWSEPVSGT
781 VFVTVRADK
SEQDB ID: 3101377WK
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVLPDPPFCC ATVMTCPMRR LSHAASQHSA RPPVHNGKTT ATLRHNRTNQ SLTKLREACD
61 GGCGMGRLLI ALWICMTAAC PAAAGAWLRE KGHGFTSASV TLYRFQGAYD YKTTAYAEWG
121 MAERLTLGID INEQPGLAGH ALIFARYPLW DLGTKGRFAA ELGLGAHHWL GDWAPMGKLT
181 LSYGKGLETR WGNGWLAVDT GWERRSGTKT NIFKLDMTAG LSTARRIDPM LQVETAYVPG
241 HPLFWTITPS LLIEGSKGRT WVLGLERKSD LPGSLNIKFS LWREF
SEQDB ID: 3101377WL
Reference:
3101377
Name: ParA-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGHVITVAQQ KGGSGKTTLA VNLAVAFMRA GRRVALMDTD PQGSAGRWFM ARLEAGGDPG
61 LEFSTASAWG VSYEVRKLAK DHDIVIIDTP PKADSDLRPA LREADLVLIP VATSHLDLWA
121 VEMVLYLAER EDKPALMVMT RNRPGTRLAQ DVAAKAQELN AELAQAALAN RVTYAETLGH
181 GRAALEAPKG PAHAEVTGLM REIEIALGL
SEQDB ID: 3101377WM
Reference:
3101377
Name: antibiotic biosynthesis monooxygenase domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MPKIAKAAPV QTVITTFEMT PGTCQDLLEA LTEAYADFIS KQPGFVAAGL HVNDAQTRIA
61 NYSQWQRRED FLAMLRTPEM RERNRRINEM CKSFEPVMYE VAETFDGN
SEQDB ID: 3101377WN
Reference:
3101377
Name: universal stress family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MYHNILVPIS FDAERDVSGP LKLAQLLATP EARVTLLHVV EHIPAYAISY MPTDYLAEAR
61 KALKKELDAL AAQLPNATGV LIEGHSGRSI LDWAETNNPD LIIISSHRPG MQDLLLGSTA
121 TQVVRHAQCA VHVVR
SEQDB ID: 3101377WP
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVVSLVLLAG SLLLLGWSLL TFGSILTPAL LVAALGVVVG VVLVLRFRLR AAPVWIVIDG
61 SNVLYWRDET PNLHTVRQCV EGLVRNGWTP LLWFDANVGY LVGSQYMGPH ELSRALRYPA
121 SHINVAPKGT PADPLLIEQA GDLGARIVTN DRFRDWVETY PQVADAGLFL RGSASDQGVS
181 LRFAEEPARK RA
SEQDB ID: 3101377WQ
Reference:
3101377
Name: pyridoxamine 5'-phosphate oxidase family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTDPYLPADA KTRAQARALI DSARHGALAV LQPGGLAPSV SRISLATDAQ GMPVSLVSSL
61 AAHTAALEAT PACALLIGEP GAKGDPLTHP RLTLHCSAQL IPRGTPEHDA LRARYLMLRP
121 KAGLYADFGD FRFVRFAVAD GLLNAGFGKA VRLSAEDLST
SEQDB ID: 3101377WR
Reference:
3101377
Name: formate/nitrate family transporter
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSDANPTGLD AYKPAEIARL VETAGVAKAG LGAAQTLTLA VLAGAFIGFG GAAYTMVMTG
61 ADTGFGPARF LGGVVFSLGL ILVIVGGAEL FTGNALMVMA AVDRRITLAA LLRNWGLVYL
121 GNLLGAVGLA LAFALTGLLD GLMGDTAQAI ARGKAALDPG AAFMRGVLCN AMVCLAVWLT
181 FAARTAAGKI LAILWPISAF VLLGLEHSVA NMYLIPQGML AGAEVTPGAA LANLFWVTLG
241 NILGGAGGVA LAYRFAYLR
SEQDB ID: 3101377WT
Reference:
3101377
Name: transcriptional regulator, Isotype: GntR-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSRIPVWKTI ALSLTEDIAE GRYGEGDRLP TEAQLAATHG VNRHTVRRAL ADLADQGLVH
61 ARRGAGVFVA ARPTDYAIGK RVRFHKNIAA GGRIPGKRIL ALTTRAADST ESEALALPAG
121 AQVHVYDGLS LADGQPIAVF QSVFPAARFP GLPEVLTETR SVTAALQRLG VADFTRVSTR
181 LTARPANATQ ALHLRLNEGA PLMFSTGVNV DPDGRPVEYG RTWFAGDRVT LTLGED
SEQDB ID: 3101377WU
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnG
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnG
Sequence:
1 MAEQEKETAA RQGWMGLLAR APEAMLMALW NRVEERPAFD WLRAPETGGV MVRGRAGGTG
61 APFNLGEMTV TRCALALADG TVGHAYVQGR SRAKAEAAAL IDALMQTAAA DTIRALVLDP
121 LAAQMAERSE GRAARAAATK VEFFTLVRGE D
SEQDB ID: 3101377WV
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnH
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnH
Sequence:
1 MMDGSSLYAG GFRDAPVDAA HAFRAAMSAM ARPGDIRRIA GAEPPAPLSV AAGTLLLTLC
61 DPETRVHLAG AVDTDAVRQW LSFHTGAPLV DAAEADFALG SWADLMPLSR YRIGTPEYPD
121 RSAALIVECD ALENTGAVLS GPGIRDTARL SLPDVDTLKG NAILYPLGCD FFFTCGDRVA
181 ALPRSTTIVA EG
SEQDB ID: 3101377WW
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnI
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnI
Sequence:
1 MYVAVKGGER AIENAHAWLA EERRGDTSVA ELSLAQIREQ LSLAVNRVMA EGSLYDPDLA
61 ALAIKQARGD LIEAIFLIRA YRTTLPRFGA SRAVDTGAMA CDRRISATFK DAPGGQVLGP
121 TFDYTHRLLD FKLAAEGDVP PAPSAPPRRE PTPHITEFLG QEGLIQPEPV SDAVPGDLTR
181 EPLEFPADRA LRLQSLARGD EGFVLGMAYS TQRGYARNHA FVGELRIGRV TVEMEVPELG
241 FAIEIGELEL TECETVNQFK GSKTEPPQFT RGYGLVFGQS ERKAISMALV DRALRWKELG
301 EDNLGAPAQD EEFVLSHSDN IQATGFLEHI KLPHYVDFQS ELELVRKLRR EAEERIVHRE
361 AAE
SEQDB ID: 3101377WX
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnJ
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnJ
Sequence:
1 MTEQAYNFAY LDEQTKRMIR RAILKGLAVP GYQVPFASRE MPMPYGWGTG GVQVSAATLT
61 PDDRLKVIDQ GADDTTNAVS IRKFFERTAG VATTEATQEA TVIQTRHRIP EAELTEDQIL
121 VYQVPIPEPL RFLEPRETET RKMHSLQEYG LMHVKLYEDI SQHGAISTAY AYPVRVAERY
181 VMDPSPIPKF DNPKMEMAAI QLFGAGREQR IYAVPPYTRV VSLDFEDYPF EATKAEHPCD
241 LCGAEDSYLD EVIMDDAGGR MFVCSDTDYC RSRREAAA
SEQDB ID: 3101377WY
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnK
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnK
Sequence:
1 MSPLLEVRGI EKRYGARIGC TNVSFDLYPG EVMGIVGESG SGKSTLLNCL AGHLVPDAGQ
61 VIFDTRHTGP VDTVTMSEPE RRMLSRTDWA FVHQHARDGL RMSVSAGGNI GERLMAVGDR
121 HYGRIRASAL DWLDRVEIDG ARIDDRPTAF SGGMQQRLQI ARNLVTGPRL VFMDEPTGGL
181 DVSVQARLLD LLRGLVRRMG LSAIIVTHDL AVVRLLADRL MVMKDGRVVE SGLTDQVLDD
241 PQHGYTQLLV SSVLQV
SEQDB ID: 3101377X
Reference:
3101377
Name: hpt domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MGQRERRCAM IHWPRVTQLR EEVGAEDFEE VVDLFLEEVE EVITRLRQAP DRSLLEKDLH
61 FLKGSALSLG FQSFSALCQD GERQSAAGHA DTVDLDAIIN SFEASKSVFQ SELPGHI
SEQDB ID: 3101377XA
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnL
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnL
Sequence:
1 MIDIRDVSKS FTLHNQGSAV IRVMEGASLH VAPGECVALT GASGAGKSTL MRVIYGNYLA
61 ASGSVLVGGL DVVQAEPREI LQLRREVLGY VSQFLRVVPR VPTVEVVAEP LLALGADPDA
121 ARARAEALLS RLNIPERLWK LSPTTFSGGE QQRVNIARGF AHAYPALLLD EPTASLDAAN
181 RAVVLELIEE AKARGAAIVG IFHDVEARAR VCDRVVDVSA FTPGAAA
SEQDB ID: 3101377XB
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnN
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnN
Sequence:
1 MTQVPVIAVV GPSGVGKDSV MTALATRDPR VHLIRRVITR PEDAGGEAFT GVSRQEFEAM
61 RAAGAFALSW EAHGLCYGVP MPSEVKQADA RALLVNLSRG VLLRAQEVFH PFAVLSLTAR
121 PEVLAARLAA RGREDAAEQA RRLGRAGMAL PEGVRRVITV DNSGPLERTV DAVLAHLQRE
181 SA
SEQDB ID: 3101377XC
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MTFLRYAIYF LPPASEAWAG FGASWLGWDV ETGQELAHPA ETGLDVAALT ATPRKYGLHA
61 TMKPPFRLAE GQDVDALRRA CATLAASRPA VTLDGLEIAR LGRFLALRPV GELGALNALA
121 AACVTELDPF RAPATPQELV RRRAARLSPE QDAHLLSWGY PYVLDQFRFH ITLTGRLDDD
181 MLMQAQTLLQ RRLGPLLPVP FTLADLALVG EAGDGRFHLI HRYALSR
SEQDB ID: 3101377XD
Reference:
3101377
Name: alkylphosphonate utilization protein, Isotype: PhnM
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: phnM
Sequence:
1 MTDEVILANA TLVLRGETVT GSLHIKGETI AGIDQGAHVP AGAVDCEGDF VSPGLVELHT
61 DNLERHIQPR PKVDWPHAAA ILAHDAELAG TGITTVFDAM RVGSIPSGAG RYLQYARNLS
121 RELWQLREAS ALKISHFLHL RAEVCSETLV EELDEFAPED RVGLVSLMDH TPGQRQFRDM
181 TKLEAYMKGK HAMSDDTFLQ HVSQLKGLRD RYGDRHEIET VKAARRLGSV LASHDDTTAE
241 QVAVSAGHGI RLAEFPTTIE AAEACHAHGI KVIMGAPNLI RGGSHSGNVA AADLAERGLL
301 DILSSDYVPS ALLLSAVRLG ALWGDMARGM ATVTRTPAQA VGLDDRGEIA PGLRADLIRF
361 RMSQDVPALQ SVWSRGRRVA
SEQDB ID: 3101377XE
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRPHGKWGTP NRAQDPEKQI FNATLSVSYP KSPVLPTARH GAAIFAGQLC PMTELQAIRE
61 ALYPEAPRKQ TRRLRRADRT RAKALSPLRV LLLLASLPVI AGSTAIGVYM RTSPYPPELA
121 LRHLAALAGC ETAALAGLPQ ARRGEPGYHQ RNDADLDGVA CGTTLADAGM EARTPTQRAP
181 GQAKFVRP
SEQDB ID: 3101377XF
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRSLLFAATL FAAATPVLAD EVTGIILAYD RVDGRIVLED KTVWSLEFVE EIPEGLAVGD
61 EVRIVFEAAG EDGITKINAI HQE
SEQDB ID: 3101377XG
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo8
Sequence:
1 METSMITELK SVRDIWKKMP SERHARIFLE EMIWPSGRHC PHCGSLSSTP IRGRTARPGL
61 YQCAERECCL QFTVTTKTPM HATKLDLRIW IAAIFLMLTS SKGISSVVMA RILGVNQKTA
121 WKLGHAIREL MDEREAVSAR LAGVVEVDEA YVGGAPKFKK GVKNKRGRGT GKPMVLVAAD
181 RTGQAKATLI PNAKGATLGP IMKEWIDPSS ALMTDSNTAY RKIGRSFASH HTVNHGKRQH
241 SRPSKGAHIN TVEAVNSQVQ RALIGVYHRL GRQHLQRYLD EILWQWNHRQ QEVKIRNRKT
301 SSGTKTIATR VWKPIPVVDQ MRGLLCCAVG RQLRRTPQWG LCWPIHLFEH KGTFA
SEQDB ID: 3101377XH
Reference:
3101377
Name: acetyltransferase, Isotype: GNAT family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSGFVIERAN PSAPEAAALI ARHVALMASQ SPEESCHVLD GSGLDSPDVA FFLLRQAGVA
61 IGMGALKTLS DGALELKSMH TVSEARGSGA GRAMLEFLLD RARSQGAGGI YLETGSTDDF
121 LPARRLYETY GFTECAPFEG YAEDPWSTFM TLDLRAAA
SEQDB ID: 3101377XJ
Reference:
3101377
Name: NADH-ubiquinone oxidoreductase-family protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRARIYQPAR NAMTSGMAKT RKWVLEYAPG SAREVDPLMG WTSSSDTQSQ VRLRFDSKEE
61 ALDYARAHGI DAVVTEPHKR KPNLRARGYG ENFATDRRGP WTH
SEQDB ID: 3101377XK
Reference:
3101377
Name: microcystin-dependent protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSKNAFTTFA TAAALSLSLI APASQARAGT DPFVGELMLA GFNFCPRGWA EANGALLAIS
61 SNTTLFSLLG TMYGGDGRTT FALPDLRGRV AIGVGTGPGL QPITQGERLG QPTTTQTIAT
121 MAPHTHLATS NASTSIHVSS DDANIQDPGN AFLGTTSTPT YTTTQPDEAL ANGSATTGVT
181 TTILSTGQGL PQENHQPSLG LKYCIALFGV YPSRN
SEQDB ID: 3101377XL
Reference:
3101377
Name: ribosomal protein L2
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplB
Sequence:
1 MALKSYKPTT PGQRGLVLID RSELWKGRPV KSLTEGLTKS GGRNNTGRIT SRRRGGGAKR
61 LYRIVDFKRN KFDVAATVER IEYDPNRTAF IALIKYEDGE QAYILAPQRL AVGDKVVASA
121 KADIKPGNAM PFSGMPIGTI VHNIEMKPGK GGQIARAAGT YAQFVGRDGG YAQIRLSSGE
181 LRMVRQECMA TVGAVSNPDN SNQNYGKAGR MRHKGIRPSV RGVAMNPIDH PHGGGEGRTS
241 GGRTPVTPWG KDTKGTRTRN KNKASQKLII RSRHAKKKGR
SEQDB ID: 3101377XM
Reference:
3101377
Name: ribosomal protein S19
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsS
Sequence:
1 MSRSVWKGPF VDAYVLKKAA AVRESGRNEV IKIWSRRSTI LPQFVGLTFG VYNGQKHIPV
61 NVTEDMIGQK FGEYSPTRTY YGHAADKKAK RK
SEQDB ID: 3101377XN
Reference:
3101377
Name: ribosomal protein L22
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplV
Sequence:
1 MGKEKNPRRV AENEAMAKLR MLRTSPQKLN LVAAMIRGKK VGQALTDLTF SNKRIAQDVK
61 KCLQSAIANA ENNHNLDVDE LIVAEAWVGK NLVMKRGRPR ARGRFGKIMK PFSELTITVR
121 QVEEQA
SEQDB ID: 3101377XP
Reference:
3101377
Name: ribosomal protein S3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsC
Sequence:
1 MGHKVNPIGM RLQVNRTWDS RWYADTKDYG NLLLEDLAIR EFIKEECKQA GVARVIIERP
61 HKKCRVTIHT ARPGVIIGKK GADIETLRKK LANMTDSELH LNIVEVRKPE MDAQLVAESI
121 AQQLERRVSF RRAMKRAVQN SMRMGALGIR VNVAGRLGGA EIARTEWYRE GRVPLHTLRA
181 DIDYALAEAS TPYGIIGIKV WIFKGEILEH DPQARDRKAQ ELQDGPAPRG AGGRR
SEQDB ID: 3101377XQ
Reference:
3101377
Name: ribosomal protein L16
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplP
Sequence:
1 MLQPKRTKFR KMFKGRIHGL AKGGSDLNFG TYGLKALEPE RVTARQIEAA RRAMTRHMKR
61 QGRVWIRIFP DTPVTSKPTE VRMGKGKGSV DYWACKVKPG RVMFEIDGVN DEIAREALRL
121 AAMKLPIKTR VVVREDW
SEQDB ID: 3101377XR
Reference:
3101377
Name: transposase
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Linkage: ISSpo2
Sequence:
1 MDHLEDAGET GAVRLGFDRR VRLEFHGSKI SSDGGLLLFR ELDEVLGLHD IARGVLRDTR
61 TGHNRLHSIV GLLRQSVFGR LAGYEDVNDA DRLALDPVMQ QVVGGRAVDT NAASASQMGR
121 FETKVRATAE KRAALAELSG QWIDRVHASA PPKWITLDID SSVCPTHGAQ EGTAWNGHFG
181 CICYHPLFVF NQFGHLECCA LRPGNVHSAD GWEEVLKPVI ARYADRHLMR FFWADAAFAI
241 PGLYEALEAE NCFYAIRMRA NRILQGRIAH LLKRPVGRPP NHVRRIYGDF EYQSASWDKP
301 RRVVAKVERH PGELFPRIGF VVTNLPMVPD WIVHFHNQRG TAEQRIKEGK QAINWTRLSC
361 KGLAQNEVRL QLHALAYNLG VFLQGADLPE EVAEWSLTSL QTRLIKIGAR VVRHARAIKF
421 QLAEVAASGD RFRLILTAIQ RLRAPPVPS
SEQDB ID: 3101377XT
Reference:
3101377
Name: Ca-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MELLFLLGFG LLGAGLAMTG DDDEESAPAE GFTFDDDQAV GTENDDILTV GDFPEGVTTI
61 PEILGQGGDD LIDLNVPPDL YDDFGDDVIN ANGVSGRVDG GAGDDTITGF FSGGTIAGGA
121 GDDSIDVASL SSDSLIVDGG EGDDFIDATD AAGGQALGGA GNDTIVAQGV GEAEGGSALF
181 PDGGEGDDLI RFTAYSDFFP GYFVADQVVR GGEGADTFEI LVNEGQHDSS LDDDVYSDTS
241 LWSVPNVEIA DFEPGVDKLV IEASRHDDAY ELADVRMEEV DDGNGGLSTN VILAYEHDTL
301 NTREIVVSLN ATGVSCSDIE VEYLGETYPV PTT
SEQDB ID: 3101377XU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MCAAHAARPL ALVMRLGYET AMSQIESLFV TRLYRARLSE HGPAIDPEEM EASCYSIAED
61 DEAGQEWCEE NGYPGYTSYA SLTDLPWRFP IFADLVTSLD AHVAAFAADL EFDLDGRKLV
121 LEDLWINILP QGGMHSSHLH PHSVISGTTY VAMPEGASAL KLEDPRSGRM MAAPTRTKTA
181 RRELQPFIYM KPDVGDVLLW ESWLRHEVPM NMSEEERISV SFNYRWD
SEQDB ID: 3101377XV
Reference:
3101377
Name: cyclic nucleotide-binding domain protein
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MVDVPRRVTA ARIRSLSPGC ASPLPETCRR AIAGGGRPVC PPGPEHAGME LDFIIEGWAG
61 HLSYLLLVLS MLMRHMLWLR LFVIASAMAG IAFDHFWLQN PVGVFWQSLL VLVNVAELAL
121 LWRNDRRARF TVEEDRFRET LLSGLSPGRC RRLLDLGRWE TLSTGTVLTR EGQRPEFLTY
181 MASGAVRIER QGRLLRLVGE GHFIGEMSMM GDGLAVATAV MQDSGRVWRI ERVKLDRLRE
241 SSPAAMAAIE TGVARDMRAK LAYQNTGPDT AAQPADGPAD
SEQDB ID: 3101377XW
Reference:
3101377
Name: ribosomal protein L29
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmC
Sequence:
1 MNAQELRNKT PDQLREDLVT LKKEAFNLRF QQATGQLENN ARIRTVRRDV ARVMTVLNEK
61 AAEAAN
SEQDB ID: 3101377XX
Reference:
3101377
Name: ribosomal protein S17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsQ
Sequence:
1 MPKRILQGTV TSDANAQTVT VLVERRFTHP VLKKTIRKSK KYRAHDEKNA FKVGDTVRII
61 ECAPKSKTKR WEVLEA
SEQDB ID: 3101377XY
Reference:
3101377
Name: ribosomal protein L14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplN
Sequence:
1 MIQMQTNLDV ADNSGARRVQ CIKVLGGSKR KYASVGDIIV VSVKEAIPRG RVKKGDVRKA
61 VVVRTAKEVR REDGTAIRFD RNAAVILNNN NEPVGTRIFG PVVRELRAKN FMKIISLAPE
121 VL
SEQDB ID: 3101377Y
Reference:
3101377
Name: response regulator
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MLTGTCLAWA VSLALVKSGQ TTVLHGREME AQTDMEPGAI RRVLVVDDSR LQRRILSSSL
61 KKWGFEVIEA ESGEEAMEIC ARAMPDLVLS DWVMPGMSGV DFCEAFRQLN SDRYCYFILL
121 TSKSEKNEVA QGLDAGADDF LIKPVSSDEL RARISAGDRV IGMQRELSAK NEVIEQALDD
181 LKRAHDAIDK DLIQARKIQE SLVPDFSQDF GSSRISLLLK PCGHIGGDLV GMFSPGPNRV
241 GFYSIDVSGH GITSAMMTAR LGGYLSSRYF DQNVAMEKRF NKFFALRQPQ DVAETLNSRL
301 IADTGIEEYF TMVYAIMDLR SGMLRMVQAG HPHPLLLRRD GTAEFIGEGG VPIGLLPGVP
361 FTQVEVQMEV GDRLLLYSDG FTECRLANGE MLEPEGLLAL VNECNPEQGG QEFLDDLFWR
421 LTQVMSPEHG LEDDVSATFF EFNGP
SEQDB ID: 3101377YA
Reference:
3101377
Name: ribosomal protein L24
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplX
Sequence:
1 MAAKLRKGDK VVVLAGKDKG KEGTITSVDP KAGKAVVDGV NIAIRHTRQT QTSQGGRLPK
61 ALPIDLSNLA LLDKNGKATR VGFRMEGDKK VRFAKTTGDV IDA
SEQDB ID: 3101377YB
Reference:
3101377
Name: ribosomal protein L5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplE
Sequence:
1 MLDAANYTPR LKAQYAETIR AALKEEFGYK NDMMIPKLEK IVLNIGCGAE AVKDSKKAKS
61 AQEDLSKIAG QKAITTTAKK SIAGFRVRED MPMGAKVTLR GERMYEFLDR LITIAMPRIR
121 DFRGVKPSFD GRGNFAMGIK EHIVFPEIDF DKVDEVWGMD IVIATTAKTD AEAKSLLKHF
181 NMPFNA
SEQDB ID: 3101377YC
Reference:
3101377
Name: ribosomal protein S14
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsN
Sequence:
1 MAKKSMIERE KKRERLVAQY AAKRAELKEI ANDESRPMEE RFKARLKLAK LPRNSSATRL
61 HNRCQLTGRP HAYYRKLKVS RIMLRELGSA GQIPGMVKSS W
SEQDB ID: 3101377YD
Reference:
3101377
Name: ribosomal protein S8
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsH
Sequence:
1 MNDPIGDMLT RIRNAQLRGK STVSTPGSKL RAWVLDVLAD EGYIRGYEKS TDVNGHPTLN
61 IELKYYEGEP VIRELKRVSK PGRRVYMGVK DIPSVRQGLG VSIVSTPKGV MSDANARSNN
121 VGGEVLCTVF
SEQDB ID: 3101377YE
Reference:
3101377
Name: ribosomal protein L6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplF
Sequence:
1 MSRIGKKPVE LPSGVSAAVS GQTIEVKGPK GARSFTATDD VTITVDGNVV SITPRGMSKR
61 ARQQWGMSRT MVANLVAGVT EGFKKELEIT GVGYRANAQG NTLKLNLGYS HDVDFTVPAG
121 VTVSTPKQTE IVVEGIDQQQ VGEVAAKIRE WRSPEPYKGK GIRYKGEFIF RKDGKKK
SEQDB ID: 3101377YF
Reference:
3101377
Name: ribosomal protein L18
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplR
Sequence:
1 MANSKRTLFL KRRLRVRNKL RKVNAGRLRL SVHRSNKNIS AQLIDDVRGV TLAAASTMEK
61 DLGVVGKNNV EAAKKVGAAI AERAKKAGVE EAYFDRGGFL FHGKVKALAD AAREGGLKI
SEQDB ID: 3101377YG
Reference:
3101377
Name: ribosomal protein S5
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsE
Sequence:
1 MAERENRRGN RRDREEAAPE FADRLVAINR VSKTVKGGKR FGFAALVVVG DQKGRVGFGK
61 GKAKEVPEAI RKATEQAKRQ MIRVQLREGR TLHHDIEGRH GAGKVVMRAA PEGTGIIAGG
121 PMRAVFEMLG VKDVVSKSLG SANPYNMIRA TIDGLKKEQS PRSVAQRRGK KVADILPKRD
181 EAPAAEAAEA
SEQDB ID: 3101377YH
Reference:
3101377
Name: ribosomal protein L30
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpmD
Sequence:
1 MAKTIVVKQI GSPIRRPADQ RATLVGLGLN KMHKTRELED TPSVRGMIRK IPHLVEIIEE
61 RG
SEQDB ID: 3101377YJ
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MAANTVSTLG YLFCQLQNLP GTRTSLDLSF GRANEFNWDI C
SEQDB ID: 3101377YK
Reference:
3101377
Name: ribosomal protein L15
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplO
Sequence:
1 MLHRPRISGG VLHFGHLLRD AFTASIRPRW PQGRKNQQAR NAVVGPSRFV GHIRRRRSEM
61 KLHELSDNPG ATKKRMRIGR GPGSGKGKMG GRGIKGQKSR SGVAINGYEG GQMPLYQRLP
121 KRGFNKPNRK AFAVVNLGLI QKFVEAGKLD GAAAITEDAL VASGLVRRKL DGIRVLAKGD
181 FNAKLNIEVT GASKSAVEAV EKAGGSLKVT NAAAAE
SEQDB ID: 3101377YL
Reference:
3101377
Name: pre-protein translocase, Subunit: SecY
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: secY
Sequence:
1 MVSAAEQMAA NTSWSALGKA TDLRNRILFT LGLLIVYRLG TFIPVPGIDG VALREFMEQA
61 GQGIGGMVSM FTGGALGRMG IFALGIMPYI SASIIVQLLT AMVPSLEQLK KEGEQGRKKI
121 NQYTRLGTVA LATVQAYGLA VSLESGDLAT EPGMYFRFAT MITLVGGTMF LMWLGEQITA
181 RGIGNGVSLI IFVGIIAEVP AALAQFFASG RSGAISPAVI IAIILMVIAV ITFVVFMERA
241 LRKIHIQYPR RQVGMKVYDG GSSHLPVKVN PAGVIPAIFA SSLLLLPVTI STFSSGAANG
301 PVMSWLLANF GPGQPLYLLF FVSMIVFFAY FYTFNVSFKP DDVAQNLKNQ NGFVPGIRPG
361 KKTAEYLEYV VNRVLVLGSA YLAAVCLLPE IMRGQFNVPF YFGGTSVLII VSVTMDTIQQ
421 VQSHLLAHQY EGLIEKSQLR GKNRKRTNRK GPARR
SEQDB ID: 3101377YM
Reference:
3101377
Name: adenylate kinase, Class: EC2.7.4.3
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: adk-1
Sequence:
1 MNIILLGPPG AGKGTQARHL VETRGMIQLS TGDMLRAARS SGTEMGKKVA AIMDAGKLVT
61 DEIVIGLIEE QLTTQTGAGF IFDGFPRTLA QADALAALLA KLGQSLHTVI EIRVDDEALV
121 DRISGRFTCG GCGEVYHDKT KPTKVDGVCD NCGSTEMVRR ADDNADSLRT RLMEYYKKTS
181 PLIGYYYAKG DLRPVNGLAD IKEVTASIEA ILG
SEQDB ID: 3101377YN
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MKRILIGLAI LAGLLAGLAL AATLLATGKR PVPDQLAGYH ETTLSVGHRD VPVSLHIWYP
61 AAQDGTAELV GQNALFYGQY VLRDAKPAPG AHPVVVFSHG SGGNANNHGW LATELARQGM
121 IVVAPNHPGT MSRDSDPHRT PHIWERARDL HAILDSLETN PPLGMQPDMD RVASAGFSLG
181 GFSALSIAGV RVSKAAFIDY CDRHAGEFDC GWMQAASVDF AAIDPAAYEA DYRDPRIKAT
241 VSIDPALPQA MTGDSLTAAT LPILLVSLGQ GEEVPPATRV DAMARQMPQA RLVETPGAWH
301 FSFLSECSTL GWIIIGLMGE ENICSDIGMR DRGVLHEELK AVISTFLSEN LALSPSG
SEQDB ID: 3101377YP
Reference:
3101377
Name: ribosomal protein S13
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsM
Sequence:
1 MARIAGVNIP TAKRVPIALT YITGIGNTSA KAICEAVGID ATRRVNELSD AEILAIREHI
61 DANYSVEGDL RREVQMNIKR LMDLGCYRGL RHRRNLPVRG QRTHTNARTR KGPAKAIAGK
121 KK
SEQDB ID: 3101377YQ
Reference:
3101377
Name: ribosomal protein S11
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpsK
Sequence:
1 MARDKTRTTK KKERKNIASG VAHVNSTFNN TKILISDVQG NAISWSSAGT MGFKGSRKST
61 PYAAQLAAED AGRKAQDHGV KTLEVEVQGP GSGRESALRA LAAVGFNITS IRDVTPIAHN
121 GCRPPKRRRV
SEQDB ID: 3101377YR
Reference:
3101377
Name: DNA-directed RNA polymerase, Subunit: alpha, Class: EC2.7.7.6
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rpoA
Sequence:
1 MIHKNWAELI KPTQLEVKPG NDPARQATVI AEPLERGFGL TLGNALRRIL MSSLQGAAIS
61 SVQIDNVLHE FSSVAGVRED VTDIILNLKQ VSLRMDVEGP KRLSVNAKGP AVVTAGDISE
121 SAGIEVLNRD HVICHLDDGA DLFMELTVNT GKGYVSADKN RPEDAPIGLI PIDAIYSPVK
181 KVAYDVQPTR EGQVLDYDKL TMKIETDGSI TPDDAVAFAA RILQDQLSIF VNFDEPESAG
241 RQDDDDGLEF NPLLLKKVDE LELSVRSANC LKNDNIVYIG DLIQKTEAEM LRTPNFGRKS
301 LNEIKEVLSG MGLHLGMDVE DWPPDNIEDL AKKFEDAF
SEQDB ID: 3101377YT
Reference:
3101377
Name: ribosomal protein L17
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rplQ
Sequence:
1 MRHARGYRRL NRTHEHRKAL FANMAGSLIE HEQIKTTLPK AKELRPIVEK LITLGKRGDL
61 HARRQAAAQL KEDKDVAKLF DVLAERYKDR QGGYVRILKA GFRYGDMAPM AIIEFVDRDV
121 DAKGAADKAR LAEEEAAAEE
SEQDB ID: 3101377YU
Reference:
3101377
Name: ORF
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MRTSSPAGYS GRPLVAKLGF KPGWSVRAIN PPPHYADLMA EAVDIRFDPD ARDADAAHLF
61 LHGPEPLAEV AATEIAHLRP GGMLWLSWAK KSSPRHAGIT EDLLRAEVLP LGWVDVKVCA
121 VDADWSGLKF LRRRG
SEQDB ID: 3101377YV
Reference:
3101377
Name: periplasmic Ser protease, Isotype: DO/DeqQ-family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MIRAILLCLP LVLAAPVQAE TRVPTSRAEI GLGFAPVVKK AAPAVVNIYA RIITAGRQSP
61 IFDDPFFRDF FRGFGAPQPR VQNSLGSGVI LSDDGYVVSN YHVVGMASEI RVVTTDRREF
121 TAQVVLGDEE SDIAILRLDA ARDLPFLALR DSDHVEVGEL ALAIGNPFGV GQTVSSGIVS
181 GLARSGAATG NGRGYFIQTD APINPGNSGG ALIDVNGDLI GINTSILSRS GGSNGIGFAI
241 PANLVAEFLR QARQGNSSFA QPWAGIAGQP MTADIADSLG LVLPEGVVIS DLHPESPLAQ
301 AGFAVGDVVT EVDGQTVNSP AEMKFRMSVA GIGGEARMTR LRQGQRETLS VALIEAPDAP
361 PAQETTLGER TILPGLTVAR LNPAVIARLG LPLSARGVVV LDPGPYGARA GLQPGDVLGA
421 INGDQVDSPR DVERALSEAG RRVQIDLQRR GQRVSLRFRL
SEQDB ID: 3101377YW
Reference:
3101377
Name: ATPase, Isotype: AAA family
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MADLFDTGAK PSPEREPPRP LADRLRPQSL GEVIGQQQVL GPEAPLGVML ASGSLSSLVF
61 WGPPGVGKTT IARLLAQETD LHFVQISAIF TGVPDLKKVF EAARIRRGNG QGTLLFVDEI
121 HRFNKAQQDG FLPHMEDGTI LLVGATTENP SFELNAALLS RAQVLVLERL SAEDLEHLTA
181 RAERELDREL PLTPEARLAL QEMADGDGRA LLNLIEQVAA WKVAAPLERE ALAARLMRRA
241 TKYDKSGDEH YNLISALHKS VRGSDPDAAL YWLARMLTGG EDPRYLARRI TRMAVEDIGL
301 ADPQAQSVCL HAWEIYERLG SPEGELALAQ AIVYLALAPK SNGAYVGYKA AMRLAKQSGS
361 APPPKHILNA PTGLMKDQGY GAGYAYDHDA EDGFSGQNYF PDGMERPQLY QPVERGFERE
421 LKKRLDYFAR LRAQREQG
SEQDB ID: 3101377YX
Reference:
3101377
Name: ribosomal large subunit pseudouridine synthase, Isotype: C, Class: EC4.2.1.70
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene, Gene: rluC
Sequence:
1 MSGVQMITVG EGDGDQRLDR WFRRMFPHVG QGRIEKMCRK GELRVDGARA KPATRLEVGQ
61 QVRIPPLPAP GERPEPVKSR VSDSDAKLIR ACVLHRDDDI IVLNKPAGLA VQGGSGQTRH
121 VDGLSEALRF GNDENPRLVH RLDKDTSGVL VLARTREAAA RLTAAFRHRN TRKIYWALVA
181 GVPTPYLGEI KTGLVKAGGH GARGEGEKMN VVHLSELDAT PGAKRAHTYY ATLYRVAGRA
241 SWVAMEPVTG RTHQLRAHMA GIGHPIIGDG KYGGSGQENL GDGWGAQLGG IISKKLHLHA
301 RSLSFEHPST RKKVTFTAPL PEHMRESWDT FGWTEDLAAE DPFEELM
SEQDB ID: 3101377YY
Reference:
3101377
Name: HAD-superfamily hydrolase, Isotype: subfamily IA variant 1
Organism:
Silicibacter pomeroyi, Strain: DSS-3
Sequenced: gene
Sequence:
1 MSQPLHLILF DVDGTLVDSQ AAIVGAMTAA FDALSLPVPA RADILSIVGL SLPQAMARLA
61 PGQSETTQAR LVEAYKQSYH ATRLALGAGH SPLYPGAREM LEQLHAVPHY LLGVATGKSK
121 RGLDALIEAH GLERVFVTRQ VADHHPSKPH PSMIETALAE TGTAPGHAAM IGDTSFDMEM
181 AAAAGIAGIG VSWGYHPPRA LSRARCIVDT FPQLPPALTQ IWT
4252 entries retrieved.